Amino acid permease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23810 AT5G23810 AT5G23810 AT5G23810 AT5G23810 |
| fragaria_vesca | FvH4_3g41850 FvH4_3g41850 FvH4_3g41850 |
| malus_domestica | MD03G1040400.v1.1 MD11G1041800.v1.1 |
| prunus_persica | Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 |
| pyrus_communis | pycom03g03110 pycom03g03120 pycom08g18190 pycom11g03550 pycom11g03570 pycom11g03580 |
| rosa_chinensis | RchiOBHm_Chr5g0075041 RchiOBHm_Chr5g0075051 |
| rosa_laevigata | RLG00000036520 RLG00000036521 |
| rosa_multiflora | Rmu_co8358743.1_g000001 Rmu_sc0006984.1_g000004 Rmu_sc0006984.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00006590 Rroxscaffold_1G00006610 |
| rosa_rugosa | Rorug05G0435700 |
| rosa_samantha | Rh5AG493000 Rh5AG493100 Rh5BG514300 Rh5BG514600 Rh5CG537900 Rh5CG538200 Rh5DG526600 Rh5DG526700 Rh5DG526900 |
| rosa_wichuraiana | Rw5G045700 Rw5G045730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1382 |
| Acc65I | GGTACC | 1 cut(s) | 95 |
| AccB1I | GGYRCC | 2 cut(s) | 95, 1217 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1204, 1302 |
| AccIII | TCCGGA | 1 cut(s) | 1140 |
| AciI | CCGC | 1 cut(s) | 794 |
| AclWI | GGATC | 2 cut(s) | 266, 1372 |
| AcuI | CTGAAG | 2 cut(s) | 452, 1111 |
| AcyI | GRCGYC | 1 cut(s) | 1218 |
| AfaI | GTAC | 7 cut(s) | 97, 323, 363, 475, 516, 1265, 1272 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 162, 294, 793, 924, 1204, 1302 |
| AgsI | TTSAA | 7 cut(s) | 60, 1090, 1115, 1161, 1195, 1225, 1373 |
| AjnI | CCWGG | 2 cut(s) | 156, 161 |
| AluBI | AGCT | 7 cut(s) | 178, 311, 337, 372, 660, 1086, 1398 |
| AluI | AGCT | 7 cut(s) | 178, 311, 337, 372, 660, 1086, 1398 |
| Alw26I | GTCTC | 2 cut(s) | 238, 324 |
| AlwI | GGATC | 2 cut(s) | 266, 1372 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 350, 1028 |
| Aor13HI | TCCGGA | 1 cut(s) | 1140 |
| AoxI | GGCC | 4 cut(s) | 159, 613, 816, 1232 |
| ApeKI | GCWGC | 4 cut(s) | 337, 407, 575, 881 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 716, 748 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1124 |
| Asp718I | GGTACC | 1 cut(s) | 95 |
| AspLEI | GCGC | 1 cut(s) | 1220 |
| AspS9I | GGNCC | 4 cut(s) | 194, 297, 816, 1293 |
| AsuC2I | CCSGG | 1 cut(s) | 903 |
| AsuHPI | GGTGA | 2 cut(s) | 27, 217 |
| AvaII | GGWCC | 3 cut(s) | 194, 297, 1293 |
| BanI | GGYRCC | 2 cut(s) | 95, 1217 |
| BbvI | GCAGC | 4 cut(s) | 324, 394, 587, 893 |
| BccI | CCATC | 2 cut(s) | 839, 1029 |
| BceAI | ACGGC | 2 cut(s) | 338, 497 |
| BciT130I | CCWGG | 2 cut(s) | 158, 163 |
| BciVI | GTATCC | 2 cut(s) | 766, 1062 |
| BclI | TGATCA | 1 cut(s) | 25 |
| BcnI | CCSGG | 1 cut(s) | 903 |
| BcoDI | GTCTC | 2 cut(s) | 238, 324 |
| BfaI | CTAG | 3 cut(s) | 179, 681, 1399 |
| BfmI | CTRYAG | 1 cut(s) | 259 |
| BfoI | RGCGCY | 1 cut(s) | 1221 |
| BfuI | GTATCC | 2 cut(s) | 766, 1062 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 943 |
| BglII | AGATCT | 1 cut(s) | 999 |
| BisI | GCNGC | 4 cut(s) | 338, 408, 576, 882 |
| BlpI | GCTNAGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 4 cut(s) | 339, 409, 577, 883 |
| Bme1390I | CCNGG | 3 cut(s) | 158, 163, 903 |
| Bme18I | GGWCC | 3 cut(s) | 194, 297, 1293 |
| BmgT120I | GGNCC | 4 cut(s) | 194, 297, 816, 1293 |
| BmiI | GGNNCC | 4 cut(s) | 69, 97, 511, 1219 |
| BmrFI | CCNGG | 3 cut(s) | 158, 163, 903 |
| BmrI | ACTGGG | 1 cut(s) | 66 |
| BmsI | GCATC | 1 cut(s) | 469 |
| BmuI | ACTGGG | 1 cut(s) | 66 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 157, 189 |
| BpmI | CTGGAG | 1 cut(s) | 184 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 174 |
| BpuMI | CCSGG | 1 cut(s) | 903 |
| BsaBI | GATNNNNATC | 1 cut(s) | 830 |
| BsaHI | GRCGYC | 1 cut(s) | 1218 |
| BsaJI | CCNNGG | 4 cut(s) | 46, 156, 616, 902 |
| BsaWI | WCCGGW | 2 cut(s) | 917, 1140 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 27, 57, 233, 263 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 162, 294, 793, 924, 1204, 1302 |
| Bse118I | RCCGGY | 1 cut(s) | 191 |
| Bse1I | ACTGG | 5 cut(s) | 72, 97, 388, 947, 1013 |
| Bse3DI | GCAATG | 4 cut(s) | 38, 117, 197, 726 |
| Bse8I | GATNNNNATC | 1 cut(s) | 830 |
| BseAI | TCCGGA | 1 cut(s) | 1140 |
| BseBI | CCWGG | 2 cut(s) | 158, 163 |
| BseDI | CCNNGG | 4 cut(s) | 46, 156, 616, 902 |
| BseGI | GGATG | 2 cut(s) | 243, 898 |
| BseJI | GATNNNNATC | 1 cut(s) | 830 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 162, 294, 793, 924, 1204, 1302 |
| BseMI | GCAATG | 4 cut(s) | 38, 117, 197, 726 |
| BseMII | CTCAG | 2 cut(s) | 188, 1020 |
| BseNI | ACTGG | 5 cut(s) | 72, 97, 388, 947, 1013 |
| BseXI | GCAGC | 4 cut(s) | 324, 394, 587, 893 |
| BshFI | GGCC | 4 cut(s) | 161, 615, 818, 1234 |
| BshNI | GGYRCC | 2 cut(s) | 95, 1217 |
| BsiSI | CCGG | 5 cut(s) | 192, 791, 902, 918, 1141 |
| BslFI | GGGAC | 3 cut(s) | 737, 769, 1300 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 162, 294, 793, 924, 1204, 1302 |
| BsmAI | GTCTC | 2 cut(s) | 238, 324 |
| BsmFI | GGGAC | 3 cut(s) | 737, 769, 1300 |
| BsmI | GAATGC | 1 cut(s) | 1319 |
| BsnI | GGCC | 4 cut(s) | 161, 615, 818, 1234 |
| Bsp13I | TCCGGA | 1 cut(s) | 1140 |
| Bsp1407I | TGTACA | 3 cut(s) | 361, 473, 1270 |
| Bsp143I | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 174 |
| BspACI | CCGC | 1 cut(s) | 794 |
| BspANI | GGCC | 4 cut(s) | 161, 615, 818, 1234 |
| BspCNI | CTCAG | 2 cut(s) | 187, 1021 |
| BspEI | TCCGGA | 1 cut(s) | 1140 |
| BspLI | GGNNCC | 4 cut(s) | 69, 97, 511, 1219 |
| BspPI | GGATC | 2 cut(s) | 266, 1372 |
| BspT107I | GGYRCC | 2 cut(s) | 95, 1217 |
| BsrDI | GCAATG | 4 cut(s) | 38, 117, 197, 726 |
| BsrFI | RCCGGY | 1 cut(s) | 191 |
| BsrGI | TGTACA | 3 cut(s) | 361, 473, 1270 |
| BsrI | ACTGG | 5 cut(s) | 72, 97, 388, 947, 1013 |
| BssAI | RCCGGY | 1 cut(s) | 191 |
| BssECI | CCNNGG | 4 cut(s) | 46, 156, 616, 902 |
| BssMI | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| BssNI | GRCGYC | 1 cut(s) | 1218 |
| BssT1I | CCWWGG | 1 cut(s) | 46 |
| Bst2UI | CCWGG | 2 cut(s) | 158, 163 |
| Bst4CI | ACNGT | 5 cut(s) | 346, 443, 1061, 1147, 1348 |
| Bst6I | CTCTTC | 2 cut(s) | 806, 1130 |
| BstACI | GRCGYC | 1 cut(s) | 1218 |
| BstAUI | TGTACA | 3 cut(s) | 361, 473, 1270 |
| BstC8I | GCNNGC | 2 cut(s) | 412, 967 |
| BstDEI | CTNAG | 4 cut(s) | 174, 325, 1029, 1394 |
| BstEII | GGTNACC | 1 cut(s) | 223 |
| BstF5I | GGATG | 2 cut(s) | 243, 898 |
| BstH2I | RGCGCY | 1 cut(s) | 1221 |
| BstHHI | GCGC | 1 cut(s) | 1220 |
| BstKTI | GATC | 4 cut(s) | 28, 274, 1002, 1367 |
| BstMAI | GTCTC | 2 cut(s) | 238, 324 |
| BstMBI | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 378, 867, 943 |
| BstNI | CCWGG | 2 cut(s) | 158, 163 |
| BstPI | GGTNACC | 1 cut(s) | 223 |
| BstSCI | CCNGG | 3 cut(s) | 156, 161, 901 |
| BstSFI | CTRYAG | 1 cut(s) | 259 |
| BstV1I | GCAGC | 4 cut(s) | 324, 394, 587, 893 |
| BstX2I | RGATCY | 2 cut(s) | 271, 999 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 719 |
| BstYI | RGATCY | 2 cut(s) | 271, 999 |
| BsuI | GTATCC | 2 cut(s) | 766, 1062 |
| BsuRI | GGCC | 4 cut(s) | 161, 615, 818, 1234 |
| BtsCI | GGATG | 2 cut(s) | 243, 898 |
| BtsI | GCAGTG | 1 cut(s) | 421 |
| BtsIMutI | CAGTG | 5 cut(s) | 79, 351, 381, 421, 1066 |
| Cac8I | GCNNGC | 2 cut(s) | 412, 967 |
| CaiI | CAGNNNCTG | 2 cut(s) | 350, 1028 |
| CfoI | GCGC | 1 cut(s) | 1220 |
| Cfr10I | RCCGGY | 1 cut(s) | 191 |
| Cfr13I | GGNCC | 4 cut(s) | 194, 297, 816, 1293 |
| Csp6I | GTAC | 7 cut(s) | 96, 322, 362, 474, 515, 1264, 1271 |
| CviAII | CATG | 5 cut(s) | 365, 471, 553, 583, 1290 |
| CviQI | GTAC | 7 cut(s) | 96, 322, 362, 474, 515, 1264, 1271 |
| DdeI | CTNAG | 4 cut(s) | 174, 325, 1029, 1394 |
| DinI | GGCGCC | 1 cut(s) | 1219 |
| DpnI | GATC | 4 cut(s) | 27, 273, 1001, 1366 |
| DpnII | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| Eam1104I | CTCTTC | 2 cut(s) | 806, 1130 |
| EarI | CTCTTC | 2 cut(s) | 806, 1130 |
| EciI | GGCGGA | 1 cut(s) | 809 |
| Eco130I | CCWWGG | 1 cut(s) | 46 |
| Eco32I | GATATC | 1 cut(s) | 995 |
| Eco47I | GGWCC | 3 cut(s) | 194, 297, 1293 |
| Eco57I | CTGAAG | 2 cut(s) | 452, 1111 |
| Eco91I | GGTNACC | 1 cut(s) | 223 |
| EcoO109I | RGGNCCY | 2 cut(s) | 297, 816 |
| EcoO65I | GGTNACC | 1 cut(s) | 223 |
| EcoRII | CCWGG | 2 cut(s) | 156, 161 |
| EcoRV | GATATC | 1 cut(s) | 995 |
| EcoT14I | CCWWGG | 1 cut(s) | 46 |
| EgeI | GGCGCC | 1 cut(s) | 1219 |
| EheI | GGCGCC | 1 cut(s) | 1219 |
| ErhI | CCWWGG | 1 cut(s) | 46 |
| FaeI | CATG | 5 cut(s) | 368, 474, 556, 586, 1293 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 308, 340 |
| FaqI | GGGAC | 3 cut(s) | 737, 769, 1300 |
| FatI | CATG | 5 cut(s) | 364, 470, 552, 582, 1289 |
| FauNDI | CATATG | 2 cut(s) | 101, 478 |
| FbaI | TGATCA | 1 cut(s) | 25 |
| Fnu4HI | GCNGC | 4 cut(s) | 338, 408, 576, 882 |
| FokI | GGATG | 2 cut(s) | 230, 905 |
| Fsp4HI | GCNGC | 4 cut(s) | 338, 408, 576, 882 |
| FspBI | CTAG | 3 cut(s) | 179, 681, 1399 |
| GlaI | GCGC | 1 cut(s) | 1219 |
| GluI | GCNGC | 4 cut(s) | 338, 408, 576, 882 |
| GsuI | CTGGAG | 1 cut(s) | 184 |
| HaeII | RGCGCY | 1 cut(s) | 1221 |
| HaeIII | GGCC | 4 cut(s) | 161, 615, 818, 1234 |
| HapII | CCGG | 5 cut(s) | 192, 791, 902, 918, 1141 |
| HhaI | GCGC | 1 cut(s) | 1220 |
| Hin1I | GRCGYC | 1 cut(s) | 1218 |
| Hin1II | CATG | 5 cut(s) | 368, 474, 556, 586, 1293 |
| Hin6I | GCGC | 1 cut(s) | 1218 |
| HinP1I | GCGC | 1 cut(s) | 1218 |
| HinfI | GANTC | 4 cut(s) | 427, 766, 907, 1120 |
| HpaII | CCGG | 5 cut(s) | 192, 791, 902, 918, 1141 |
| HphI | GGTGA | 2 cut(s) | 27, 217 |
| Hpy166II | GTNNAC | 2 cut(s) | 77, 1072 |
| Hpy188I | TCNGA | 3 cut(s) | 253, 432, 999 |
| Hpy188III | TCNNGA | 4 cut(s) | 666, 770, 913, 1141 |
| Hpy8I | GTNNAC | 2 cut(s) | 77, 1072 |
| HpyAV | CCTTC | 3 cut(s) | 66, 449, 1367 |
| HpyCH4III | ACNGT | 5 cut(s) | 346, 443, 1061, 1147, 1348 |
| HpyCH4IV | ACGT | 1 cut(s) | 776 |
| HpyCH4V | TGCA | 8 cut(s) | 340, 575, 674, 881, 969, 1022, 1064, 1175 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 378, 867, 943 |
| HpyF3I | CTNAG | 4 cut(s) | 174, 325, 1029, 1394 |
| HpySE526I | ACGT | 1 cut(s) | 776 |
| Hsp92I | GRCGYC | 1 cut(s) | 1218 |
| Hsp92II | CATG | 5 cut(s) | 368, 474, 556, 586, 1293 |
| HspAI | GCGC | 1 cut(s) | 1218 |
| KasI | GGCGCC | 1 cut(s) | 1217 |
| Kpn2I | TCCGGA | 1 cut(s) | 1140 |
| KpnI | GGTACC | 1 cut(s) | 99 |
| Ksp22I | TGATCA | 1 cut(s) | 25 |
| Kzo9I | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| LmnI | GCTCC | 3 cut(s) | 48, 509, 657 |
| Lsp1109I | GCAGC | 4 cut(s) | 324, 394, 587, 893 |
| LweI | GCATC | 1 cut(s) | 469 |
| MaeI | CTAG | 3 cut(s) | 179, 681, 1399 |
| MaeII | ACGT | 1 cut(s) | 776 |
| MaeIII | GTNAC | 5 cut(s) | 33, 223, 528, 838, 1342 |
| MalI | GATC | 4 cut(s) | 27, 273, 1001, 1366 |
| MboI | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| MboII | GAAGA | 6 cut(s) | 23, 32, 700, 823, 968, 1117 |
| MflI | RGATCY | 2 cut(s) | 271, 999 |
| MluCI | AATT | 4 cut(s) | 387, 695, 1170, 1281 |
| Mly113I | GGCGCC | 1 cut(s) | 1218 |
| MmeI | TCCRAC | 4 cut(s) | 261, 276, 967, 1342 |
| MnlI | CCTC | 9 cut(s) | 257, 626, 688, 798, 807, 829, 866, 983, 1190 |
| MroI | TCCGGA | 1 cut(s) | 1140 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1124 |
| MseI | TTAA | 4 cut(s) | 651, 704, 779, 1238 |
| MspI | CCGG | 5 cut(s) | 192, 791, 902, 918, 1141 |
| MspR9I | CCNGG | 3 cut(s) | 158, 163, 903 |
| Mva1269I | GAATGC | 1 cut(s) | 1319 |
| MvaI | CCWGG | 2 cut(s) | 158, 163 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 378, 867, 943 |
| NarI | GGCGCC | 1 cut(s) | 1218 |
| NciI | CCSGG | 1 cut(s) | 903 |
| NdeI | CATATG | 2 cut(s) | 101, 478 |
| NdeII | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| NlaIII | CATG | 5 cut(s) | 368, 474, 556, 586, 1293 |
| NlaIV | GGNNCC | 4 cut(s) | 69, 97, 511, 1219 |
| NmeAIII | GCCGAG | 1 cut(s) | 597 |
| NmuCI | GTSAC | 4 cut(s) | 33, 223, 528, 838 |
| PctI | GAATGC | 1 cut(s) | 1319 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1124 |
| PfeI | GAWTC | 4 cut(s) | 427, 766, 907, 1120 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1204, 1302 |
| PkrI | GCNGC | 4 cut(s) | 339, 409, 577, 883 |
| PluTI | GGCGCC | 1 cut(s) | 1221 |
| PpuMI | RGGWCCY | 1 cut(s) | 297 |
| PsiI | TTATAA | 1 cut(s) | 1382 |
| Psp5II | RGGWCCY | 1 cut(s) | 297 |
| Psp6I | CCWGG | 2 cut(s) | 156, 161 |
| PspEI | GGTNACC | 1 cut(s) | 223 |
| PspGI | CCWGG | 2 cut(s) | 156, 161 |
| PspN4I | GGNNCC | 4 cut(s) | 69, 97, 511, 1219 |
| PspPI | GGNCC | 4 cut(s) | 194, 297, 816, 1293 |
| PspPPI | RGGWCCY | 1 cut(s) | 297 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1064, 1096 |
| PstNI | CAGNNNCTG | 2 cut(s) | 350, 1028 |
| PsuI | RGATCY | 2 cut(s) | 271, 999 |
| RsaI | GTAC | 7 cut(s) | 97, 323, 363, 475, 516, 1265, 1272 |
| RsaNI | GTAC | 7 cut(s) | 96, 322, 362, 474, 515, 1264, 1271 |
| SaqAI | TTAA | 4 cut(s) | 651, 704, 779, 1238 |
| SatI | GCNGC | 4 cut(s) | 338, 408, 576, 882 |
| Sau3AI | GATC | 4 cut(s) | 25, 271, 999, 1364 |
| Sau96I | GGNCC | 4 cut(s) | 194, 297, 816, 1293 |
| ScrFI | CCNGG | 3 cut(s) | 158, 163, 903 |
| SfaNI | GCATC | 1 cut(s) | 469 |
| SfcI | CTRYAG | 1 cut(s) | 259 |
| SfoI | GGCGCC | 1 cut(s) | 1219 |
| SinI | GGWCC | 3 cut(s) | 194, 297, 1293 |
| Sse9I | AATT | 4 cut(s) | 387, 695, 1170, 1281 |
| SsiI | CCGC | 1 cut(s) | 794 |
| SspDI | GGCGCC | 1 cut(s) | 1217 |
| SspMI | CTAG | 3 cut(s) | 179, 681, 1399 |
| StyD4I | CCNGG | 3 cut(s) | 156, 161, 901 |
| StyI | CCWWGG | 1 cut(s) | 46 |
| TaaI | ACNGT | 5 cut(s) | 346, 443, 1061, 1147, 1348 |
| TaiI | ACGT | 1 cut(s) | 779 |
| TasI | AATT | 4 cut(s) | 387, 695, 1170, 1281 |
| TatI | WGTACW | 5 cut(s) | 321, 361, 473, 1263, 1270 |
| TfiI | GAWTC | 4 cut(s) | 427, 766, 907, 1120 |
| Tru1I | TTAA | 4 cut(s) | 651, 704, 779, 1238 |
| Tru9I | TTAA | 4 cut(s) | 651, 704, 779, 1238 |
| TscAI | CASTG | 5 cut(s) | 79, 351, 388, 421, 1066 |
| TseFI | GTSAC | 4 cut(s) | 33, 223, 528, 838 |
| TseI | GCWGC | 4 cut(s) | 337, 407, 575, 881 |
| Tsp45I | GTSAC | 4 cut(s) | 33, 223, 528, 838 |
| TspDTI | ATGAA | 4 cut(s) | 459, 569, 824, 968 |
| TspRI | CASTG | 5 cut(s) | 79, 351, 388, 421, 1066 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1204, 1302 |
| VpaK11BI | GGWCC | 3 cut(s) | 194, 297, 1293 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1124 |
| XspI | CTAG | 3 cut(s) | 179, 681, 1399 |