Amino acid permease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23810 AT5G23810 AT5G23810 AT5G23810 AT5G23810 |
| fragaria_vesca | FvH4_3g41850 FvH4_3g41850 FvH4_3g41850 |
| malus_domestica | MD03G1040400.v1.1 MD11G1041800.v1.1 |
| prunus_persica | Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 Prupe.6G032700_v2.0.a1 |
| pyrus_communis | pycom03g03110 pycom03g03120 pycom08g18190 pycom11g03550 pycom11g03570 pycom11g03580 |
| rosa_chinensis | RchiOBHm_Chr5g0075041 RchiOBHm_Chr5g0075051 |
| rosa_laevigata | RLG00000036520 RLG00000036521 |
| rosa_multiflora | Rmu_co8358743.1_g000001 Rmu_sc0006984.1_g000004 Rmu_sc0006984.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00006590 Rroxscaffold_1G00006610 |
| rosa_rugosa | Rorug05G0435700 |
| rosa_samantha | Rh5AG493000 Rh5AG493100 Rh5BG514300 Rh5BG514600 Rh5CG537900 Rh5CG538200 Rh5DG526600 Rh5DG526700 Rh5DG526900 |
| rosa_wichuraiana | Rw5G045700 Rw5G045730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1388 |
| Acc36I | ACCTGC | 1 cut(s) | 188 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 559, 1210 |
| AccI | GTMKAC | 1 cut(s) | 1008 |
| AciI | CCGC | 2 cut(s) | 888, 1068 |
| AclWI | GGATC | 3 cut(s) | 291, 297, 1378 |
| AcsI | RAATTY | 1 cut(s) | 1097 |
| AcuI | CTGAAG | 1 cut(s) | 1117 |
| AfaI | GTAC | 4 cut(s) | 156, 500, 1271, 1278 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 168, 280, 559, 894, 1067, 1210 |
| AgsI | TTSAA | 8 cut(s) | 63, 243, 573, 787, 1121, 1201, 1231, 1379 |
| AhlI | ACTAGT | 1 cut(s) | 491 |
| AjnI | CCWGG | 3 cut(s) | 666, 907, 1295 |
| AleI | CACNNNNGTG | 2 cut(s) | 137, 1355 |
| AluBI | AGCT | 6 cut(s) | 54, 184, 317, 413, 431, 1404 |
| AluI | AGCT | 6 cut(s) | 54, 184, 317, 413, 431, 1404 |
| AlwI | GGATC | 3 cut(s) | 291, 297, 1378 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1034 |
| AoxI | GGCC | 5 cut(s) | 286, 619, 822, 1224, 1238 |
| ApeKI | GCWGC | 5 cut(s) | 224, 413, 420, 505, 581 |
| ApoI | RAATTY | 1 cut(s) | 1097 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1130 |
| AspS9I | GGNCC | 4 cut(s) | 200, 287, 1224, 1293 |
| AsuC2I | CCSGG | 1 cut(s) | 275 |
| AsuHPI | GGTGA | 2 cut(s) | 26, 223 |
| AsuNHI | GCTAGC | 1 cut(s) | 416 |
| AvaII | GGWCC | 2 cut(s) | 200, 1293 |
| BbvI | GCAGC | 5 cut(s) | 211, 400, 432, 492, 593 |
| BccI | CCATC | 4 cut(s) | 278, 845, 1035, 1100 |
| BciT130I | CCWGG | 3 cut(s) | 668, 909, 1297 |
| BciVI | GTATCC | 1 cut(s) | 772 |
| BcnI | CCSGG | 1 cut(s) | 275 |
| BcuI | ACTAGT | 1 cut(s) | 491 |
| BfaI | CTAG | 4 cut(s) | 215, 417, 492, 1405 |
| BfmI | CTRYAG | 5 cut(s) | 114, 225, 265, 1009, 1260 |
| BfuAI | ACCTGC | 1 cut(s) | 188 |
| BfuI | GTATCC | 1 cut(s) | 772 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 384 |
| BglII | AGATCT | 1 cut(s) | 324 |
| BisI | GCNGC | 6 cut(s) | 225, 414, 421, 506, 582, 888 |
| BlpI | GCTNAGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 6 cut(s) | 226, 415, 422, 507, 583, 889 |
| Bme1390I | CCNGG | 4 cut(s) | 275, 668, 909, 1297 |
| Bme18I | GGWCC | 2 cut(s) | 200, 1293 |
| BmgT120I | GGNCC | 4 cut(s) | 200, 287, 1224, 1293 |
| BmiI | GGNNCC | 5 cut(s) | 103, 665, 914, 1225, 1294 |
| BmrFI | CCNGG | 4 cut(s) | 275, 668, 909, 1297 |
| BmrI | ACTGGG | 1 cut(s) | 1182 |
| BmsI | GCATC | 2 cut(s) | 475, 863 |
| BmtI | GCTAGC | 1 cut(s) | 420 |
| BmuI | ACTGGG | 1 cut(s) | 1182 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 163, 195 |
| BpmI | CTGGAG | 1 cut(s) | 780 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 788 |
| BpuMI | CCSGG | 1 cut(s) | 275 |
| Bsa29I | ATCGAT | 1 cut(s) | 957 |
| BsaBI | GATNNNNATC | 1 cut(s) | 301 |
| BsaJI | CCNNGG | 4 cut(s) | 622, 667, 908, 1112 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 138, 168, 1073, 1103 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 168, 280, 559, 894, 1067, 1210 |
| Bse1I | ACTGG | 4 cut(s) | 103, 953, 1019, 1177 |
| Bse3DI | GCAATG | 3 cut(s) | 41, 393, 1188 |
| Bse8I | GATNNNNATC | 1 cut(s) | 301 |
| BseBI | CCWGG | 3 cut(s) | 668, 909, 1297 |
| BseCI | ATCGAT | 1 cut(s) | 957 |
| BseDI | CCNNGG | 4 cut(s) | 622, 667, 908, 1112 |
| BseGI | GGATG | 3 cut(s) | 289, 878, 904 |
| BseJI | GATNNNNATC | 1 cut(s) | 301 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 168, 280, 559, 894, 1067, 1210 |
| BseMI | GCAATG | 3 cut(s) | 41, 393, 1188 |
| BseMII | CTCAG | 3 cut(s) | 88, 194, 1026 |
| BseNI | ACTGG | 4 cut(s) | 103, 953, 1019, 1177 |
| BseRI | GAGGAG | 2 cut(s) | 242, 687 |
| BseXI | GCAGC | 5 cut(s) | 211, 400, 432, 492, 593 |
| BseYI | CCCAGC | 1 cut(s) | 184 |
| BshFI | GGCC | 5 cut(s) | 288, 621, 824, 1226, 1240 |
| BshVI | ATCGAT | 1 cut(s) | 957 |
| BsiSI | CCGG | 1 cut(s) | 275 |
| BslFI | GGGAC | 2 cut(s) | 502, 775 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 168, 280, 559, 894, 1067, 1210 |
| BsmFI | GGGAC | 2 cut(s) | 502, 775 |
| BsmI | GAATGC | 1 cut(s) | 1325 |
| BsnI | GGCC | 5 cut(s) | 288, 621, 824, 1226, 1240 |
| Bsp1407I | TGTACA | 2 cut(s) | 498, 1276 |
| Bsp143I | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 180 |
| BspACI | CCGC | 2 cut(s) | 888, 1068 |
| BspANI | GGCC | 5 cut(s) | 288, 621, 824, 1226, 1240 |
| BspCNI | CTCAG | 3 cut(s) | 87, 193, 1027 |
| BspDI | ATCGAT | 1 cut(s) | 957 |
| BspLI | GGNNCC | 5 cut(s) | 103, 665, 914, 1225, 1294 |
| BspMAI | CTGCAG | 2 cut(s) | 118, 229 |
| BspMI | ACCTGC | 1 cut(s) | 188 |
| BspOI | GCTAGC | 1 cut(s) | 420 |
| BspPI | GGATC | 3 cut(s) | 291, 297, 1378 |
| BspQI | GCTCTTC | 1 cut(s) | 61 |
| BsrDI | GCAATG | 3 cut(s) | 41, 393, 1188 |
| BsrGI | TGTACA | 2 cut(s) | 498, 1276 |
| BsrI | ACTGG | 4 cut(s) | 103, 953, 1019, 1177 |
| BssECI | CCNNGG | 4 cut(s) | 622, 667, 908, 1112 |
| BssMI | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| BssT1I | CCWWGG | 2 cut(s) | 622, 1112 |
| Bst2UI | CCWGG | 3 cut(s) | 668, 909, 1297 |
| Bst4CI | ACNGT | 3 cut(s) | 352, 1153, 1354 |
| Bst6I | CTCTTC | 2 cut(s) | 61, 335 |
| BstAUI | TGTACA | 2 cut(s) | 498, 1276 |
| BstC8I | GCNNGC | 3 cut(s) | 195, 418, 973 |
| BstDEI | CTNAG | 5 cut(s) | 74, 180, 331, 1035, 1400 |
| BstF5I | GGATG | 3 cut(s) | 289, 878, 904 |
| BstKTI | GATC | 4 cut(s) | 299, 305, 327, 1373 |
| BstMBI | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 190, 384, 719, 873 |
| BstNI | CCWGG | 3 cut(s) | 668, 909, 1297 |
| BstNSI | RCATGY | 1 cut(s) | 505 |
| BstSCI | CCNGG | 4 cut(s) | 273, 666, 907, 1295 |
| BstSFI | CTRYAG | 5 cut(s) | 114, 225, 265, 1009, 1260 |
| BstV1I | GCAGC | 5 cut(s) | 211, 400, 432, 492, 593 |
| BstX2I | RGATCY | 2 cut(s) | 296, 324 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 725 |
| BstYI | RGATCY | 2 cut(s) | 296, 324 |
| Bsu15I | ATCGAT | 1 cut(s) | 957 |
| BsuI | GTATCC | 1 cut(s) | 772 |
| BsuRI | GGCC | 5 cut(s) | 288, 621, 824, 1226, 1240 |
| BsuTUI | ATCGAT | 1 cut(s) | 957 |
| BtsCI | GGATG | 3 cut(s) | 289, 878, 904 |
| BveI | ACCTGC | 1 cut(s) | 188 |
| Cac8I | GCNNGC | 3 cut(s) | 195, 418, 973 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1034 |
| Cfr13I | GGNCC | 4 cut(s) | 200, 287, 1224, 1293 |
| ClaI | ATCGAT | 1 cut(s) | 957 |
| CseI | GACGC | 1 cut(s) | 412 |
| Csp6I | GTAC | 4 cut(s) | 155, 499, 1270, 1277 |
| CviAII | CATG | 7 cut(s) | 168, 310, 371, 477, 502, 559, 589 |
| CviQI | GTAC | 4 cut(s) | 155, 499, 1270, 1277 |
| DdeI | CTNAG | 5 cut(s) | 74, 180, 331, 1035, 1400 |
| DpnI | GATC | 4 cut(s) | 298, 304, 326, 1372 |
| DpnII | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| Eam1104I | CTCTTC | 2 cut(s) | 61, 335 |
| EarI | CTCTTC | 2 cut(s) | 61, 335 |
| Eco130I | CCWWGG | 2 cut(s) | 622, 1112 |
| Eco147I | AGGCCT | 1 cut(s) | 824 |
| Eco32I | GATATC | 1 cut(s) | 1001 |
| Eco47I | GGWCC | 2 cut(s) | 200, 1293 |
| Eco57I | CTGAAG | 1 cut(s) | 1117 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1224, 1293 |
| EcoRII | CCWGG | 3 cut(s) | 666, 907, 1295 |
| EcoRV | GATATC | 1 cut(s) | 1001 |
| EcoT14I | CCWWGG | 2 cut(s) | 622, 1112 |
| ErhI | CCWWGG | 2 cut(s) | 622, 1112 |
| FaeI | CATG | 7 cut(s) | 171, 313, 374, 480, 505, 562, 592 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 43, 75, 314, 346 |
| FaqI | GGGAC | 2 cut(s) | 502, 775 |
| FatI | CATG | 7 cut(s) | 167, 309, 370, 476, 501, 558, 588 |
| FauNDI | CATATG | 1 cut(s) | 107 |
| FblI | GTMKAC | 1 cut(s) | 1008 |
| Fnu4HI | GCNGC | 6 cut(s) | 225, 414, 421, 506, 582, 888 |
| FokI | GGATG | 3 cut(s) | 296, 885, 911 |
| Fsp4HI | GCNGC | 6 cut(s) | 225, 414, 421, 506, 582, 888 |
| FspBI | CTAG | 4 cut(s) | 215, 417, 492, 1405 |
| GluI | GCNGC | 6 cut(s) | 225, 414, 421, 506, 582, 888 |
| GsaI | CCCAGC | 1 cut(s) | 188 |
| GsuI | CTGGAG | 1 cut(s) | 780 |
| HaeIII | GGCC | 5 cut(s) | 288, 621, 824, 1226, 1240 |
| HapII | CCGG | 1 cut(s) | 275 |
| HgaI | GACGC | 1 cut(s) | 412 |
| Hin1II | CATG | 7 cut(s) | 171, 313, 374, 480, 505, 562, 592 |
| HincII | GTYRAC | 1 cut(s) | 1167 |
| HindII | GTYRAC | 1 cut(s) | 1167 |
| HinfI | GANTC | 3 cut(s) | 278, 655, 772 |
| HpaII | CCGG | 1 cut(s) | 275 |
| HphI | GGTGA | 2 cut(s) | 26, 223 |
| Hpy166II | GTNNAC | 3 cut(s) | 1009, 1078, 1167 |
| Hpy188I | TCNGA | 4 cut(s) | 283, 428, 438, 1148 |
| Hpy188III | TCNNGA | 6 cut(s) | 300, 322, 523, 767, 776, 919 |
| Hpy8I | GTNNAC | 3 cut(s) | 1009, 1078, 1167 |
| HpyAV | CCTTC | 4 cut(s) | 455, 724, 814, 1141 |
| HpyCH4III | ACNGT | 3 cut(s) | 352, 1153, 1354 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 190, 384, 719, 873 |
| HpyF3I | CTNAG | 5 cut(s) | 74, 180, 331, 1035, 1400 |
| Hsp92II | CATG | 7 cut(s) | 171, 313, 374, 480, 505, 562, 592 |
| Kzo9I | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| LguI | GCTCTTC | 1 cut(s) | 61 |
| LmnI | GCTCC | 2 cut(s) | 146, 663 |
| Lsp1109I | GCAGC | 5 cut(s) | 211, 400, 432, 492, 593 |
| LweI | GCATC | 2 cut(s) | 475, 863 |
| MaeI | CTAG | 4 cut(s) | 215, 417, 492, 1405 |
| MaeIII | GTNAC | 5 cut(s) | 229, 257, 534, 844, 1348 |
| MalI | GATC | 4 cut(s) | 298, 304, 326, 1372 |
| MboI | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| MboII | GAAGA | 8 cut(s) | 35, 38, 48, 51, 352, 755, 829, 974 |
| MflI | RGATCY | 2 cut(s) | 296, 324 |
| MluCI | AATT | 3 cut(s) | 701, 1097, 1287 |
| MmeI | TCCRAC | 1 cut(s) | 704 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1130 |
| MslI | CAYNNNNRTG | 2 cut(s) | 137, 1355 |
| MspA1I | CMGCKG | 3 cut(s) | 184, 413, 1068 |
| MspI | CCGG | 1 cut(s) | 275 |
| MspR9I | CCNGG | 4 cut(s) | 275, 668, 909, 1297 |
| Mva1269I | GAATGC | 1 cut(s) | 1325 |
| MvaI | CCWGG | 3 cut(s) | 668, 909, 1297 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 190, 384, 719, 873 |
| NciI | CCSGG | 1 cut(s) | 275 |
| NdeI | CATATG | 1 cut(s) | 107 |
| NdeII | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| NheI | GCTAGC | 1 cut(s) | 416 |
| NlaIII | CATG | 7 cut(s) | 171, 313, 374, 480, 505, 562, 592 |
| NlaIV | GGNNCC | 5 cut(s) | 103, 665, 914, 1225, 1294 |
| NmuCI | GTSAC | 5 cut(s) | 229, 257, 534, 844, 1348 |
| NspI | RCATGY | 1 cut(s) | 505 |
| OliI | CACNNNNGTG | 2 cut(s) | 137, 1355 |
| PceI | AGGCCT | 1 cut(s) | 824 |
| PciSI | GCTCTTC | 1 cut(s) | 61 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 287 |
| PctI | GAATGC | 1 cut(s) | 1325 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1130 |
| PfeI | GAWTC | 3 cut(s) | 278, 655, 772 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 559, 1210 |
| PfoI | TCCNGGA | 1 cut(s) | 1295 |
| PkrI | GCNGC | 6 cut(s) | 226, 415, 422, 507, 583, 889 |
| PpuMI | RGGWCCY | 1 cut(s) | 1293 |
| PsiI | TTATAA | 1 cut(s) | 1388 |
| Psp5II | RGGWCCY | 1 cut(s) | 1293 |
| Psp6I | CCWGG | 3 cut(s) | 666, 907, 1295 |
| PspFI | CCCAGC | 1 cut(s) | 184 |
| PspGI | CCWGG | 3 cut(s) | 666, 907, 1295 |
| PspN4I | GGNNCC | 5 cut(s) | 103, 665, 914, 1225, 1294 |
| PspPI | GGNCC | 4 cut(s) | 200, 287, 1224, 1293 |
| PspPPI | RGGWCCY | 1 cut(s) | 1293 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1070, 1102 |
| PstI | CTGCAG | 2 cut(s) | 118, 229 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1034 |
| PsuI | RGATCY | 2 cut(s) | 296, 324 |
| PvuII | CAGCTG | 2 cut(s) | 184, 413 |
| RsaI | GTAC | 4 cut(s) | 156, 500, 1271, 1278 |
| RsaNI | GTAC | 4 cut(s) | 155, 499, 1270, 1277 |
| RseI | CAYNNNNRTG | 2 cut(s) | 137, 1355 |
| SapI | GCTCTTC | 1 cut(s) | 61 |
| SatI | GCNGC | 6 cut(s) | 225, 414, 421, 506, 582, 888 |
| Sau3AI | GATC | 4 cut(s) | 296, 302, 324, 1370 |
| Sau96I | GGNCC | 4 cut(s) | 200, 287, 1224, 1293 |
| ScrFI | CCNGG | 4 cut(s) | 275, 668, 909, 1297 |
| SfaNI | GCATC | 2 cut(s) | 475, 863 |
| SfcI | CTRYAG | 5 cut(s) | 114, 225, 265, 1009, 1260 |
| SinI | GGWCC | 2 cut(s) | 200, 1293 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 137, 1355 |
| SmlI | CTYRAG | 1 cut(s) | 767 |
| SmoI | CTYRAG | 1 cut(s) | 767 |
| SpeI | ACTAGT | 1 cut(s) | 491 |
| Sse9I | AATT | 3 cut(s) | 701, 1097, 1287 |
| SseBI | AGGCCT | 1 cut(s) | 824 |
| SsiI | CCGC | 2 cut(s) | 888, 1068 |
| SspI | AATATT | 1 cut(s) | 363 |
| SspMI | CTAG | 4 cut(s) | 215, 417, 492, 1405 |
| StuI | AGGCCT | 1 cut(s) | 824 |
| StyD4I | CCNGG | 4 cut(s) | 273, 666, 907, 1295 |
| StyI | CCWWGG | 2 cut(s) | 622, 1112 |
| TaaI | ACNGT | 3 cut(s) | 352, 1153, 1354 |
| TaqI | TCGA | 1 cut(s) | 957 |
| TasI | AATT | 3 cut(s) | 701, 1097, 1287 |
| TatI | WGTACW | 3 cut(s) | 498, 1269, 1276 |
| TauI | GCSGC | 1 cut(s) | 890 |
| TfiI | GAWTC | 3 cut(s) | 278, 655, 772 |
| TseFI | GTSAC | 5 cut(s) | 229, 257, 534, 844, 1348 |
| TseI | GCWGC | 5 cut(s) | 224, 413, 420, 505, 581 |
| Tsp45I | GTSAC | 5 cut(s) | 229, 257, 534, 844, 1348 |
| TspDTI | ATGAA | 4 cut(s) | 84, 465, 830, 974 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 559, 1210 |
| VpaK11BI | GGWCC | 2 cut(s) | 200, 1293 |
| XapI | RAATTY | 1 cut(s) | 1097 |
| XceI | RCATGY | 1 cut(s) | 505 |
| XmiI | GTMKAC | 1 cut(s) | 1008 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1130 |
| XspI | CTAG | 4 cut(s) | 215, 417, 492, 1405 |