AT5G41770

crooked neck protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002910
Physical Location & Seq
Forward (+)
16717946 .. 16721222
3277 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G41770.1

Sequence Viewer

Length: 2118 bp
ATGGCTTCCGGCGGCAAAGATTCCGATCGTACCTTAGGGTACATGACACGGAAAGATACAGAAGTCAAGCTTCCAAGACCTACTCGTGTCAAGAACAAAACTCCGGCGCCGATTCAAATAACTGCCGAACAGATATTAAGAGAAGCTCGAGAGAGACAAGAAGCTGAGATCCGTCCTCCCAAGCAAAAAATCACTGATTCCACTGAGCTTTCCGACTACAGACTCCGCCGGAGAAAGGAATTTGAAGACCAGATCCGTCGCGCGAGATGGAACATTCAAGTTTGGGTCAAATACGCTCAATGGGAAGAGTCACAGAAAGATTACGCTCGTGCTCGAAGTGTTTGGGAACGAGCCATAGAAGGAGATTATAGGAACCATACGCTTTGGCTCAAATACGCAGAGTTCGAGATGAAGAACAAGTTTGTGAACAGTGCGAGAAACGTTTGGGATCGAGCTGTTACGCTTCTTCCTCGTGTAGACCAGCTTTGGTACAAGTATATTCATATGGAGGAGATACTTGGGAATATCGCCGGAGCTAGGCAGATTTTTGAACGGTGGATGGATTGGTCACCGGATCAACAAGGTTGGCTCTCGTTTATTAAGTTCGAACTTAGGTATAATGAAATTGAACGTGCTAGAACGATATACGAGAGATTTGTTCTTTGTCATCCCAAGGTTTCGGCTTATATTAGATATGCTAAGTTTGAGATGAAGGGTGGTGAAGTTGCTCGTTGTAGGAGTGTGTATGAACGTGCTACAGAGAAGCTTGCTGATGATGAAGAAGCTGAGATCCTCTTTGTGGCGTTTGCTGAGTTTGAAGAACGTTGTAAGGAAGTGGAAAGGGCTAGGTTTATCTATAAGTTTGCTCTTGATCATATTCCTAAAGGAAGAGCTGAGGATTTGTATAGGAAGTTTGTTGCTTTTGAGAAACAGTATGGTGATAAGGAAGGGATTGAGGATGCCATTGTTGGGAAGAGGAGGTTTCAGTATGAAGATGAAGTGAGGAAGAGTCCTTCCAACTATGATTCGTGGTTCGATTATGTTAGGTTAGAAGAGAGTGTGGGGAACAAAGATAGGATCAGAGAAATCTATGAGAGGGCTATTGCTAATGTTCCACCTGCTGAGGAGAAACGATACTGGCAAAGATATATCTATCTCTGGATTAATTATGCATTATTTGAAGAGATTGAAACTGAAGATATTGAGCGTACCCGAGATGTTTACAGAGAGTGCCTTAAGCTTATCCCCCACAGCAAATTTTCTTTTGCCAAAATATGGTTGCTCGCTGCTCAGTTTGAGATAAGGCAATTGAATCTCACGGGTGCTCGCCAGATATTAGGAAATGCGATTGGAAAAGCTCCCAAAGATAAGATATTCAAGAAATACATTGAGATCGAGCTTCAGTTGGGAAACATGGATAGGTGTAGAAAGTTATATGAACGGTATCTTGAGTGGTCTCCTGAGAATTGCTATGCTTGGAGCAAGTATGCTGAACTAGAGAGGTCTCTTGTTGAAACAGAACGAGCTAGAGCTATTTTTGAACTTGCAATATCCCAGCCAGCTCTTGACATGCCTGAGCTGCTTTGGAAGGCATACATTGATTTTGAGATATCAGAAGGGGAATTAGAGAGGACAAGGGCTTTATATGAGCGACTCTTGGACCGTACTAAGCATTACAAGGTGTGGGTTAGCTTTGCAAAGTTTGAAGCTTCTGCTGCGGAACTAGAGGAAGACGAGAATGAAGATGAAGACCAGGAAGAAGATGTTATTGAACACAAGAAAGATTGCATCAAACGTGCCAGAGCAATTTTCGATAGAGCCAACACATATTACAAAGACTCCACACCAGAGCTGAAGGAAGAACGAGCTACGCTCTTGGAGGATTGGCTGAACATGGAGAGTAGCTTTGGTAACCTCGGGGATGTTAGTATTGTTCAATCGAAGCTTCCAAAGAAGCTCAAGAAAAGAAAGGCGATCACTAGAGAAGACGGGTCAACAGAGTACGAAGAATACATCGATTATTTATACCCAGAAGAATCGCAAACAACGAATCTCAAGATTCTTGAAGCTGCATACAAATGGAAGAAGCAGAAGGTTGCTGCTTCTGAGGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
HAT

Protein Analysis

705

Amino Acids

84.53

Weight (kDa)

5.86

Isoelectric Point (pI)

55.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_PRP39_C PF23241 77 - 192 1.8e-13 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 80 - 225 4.5e-18 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 86 - 321 1e-19 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
Suf PF05843 89 - 320 2.2e-07 Suppressor of forked protein (Suf)
HAT_PRP39_N PF23240 93 - 188 5.6e-08 PRP39 N-terminal HAT repeat
HAT_PRP39_N PF23240 193 - 311 1.1e-08 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 194 - 295 2.5e-11 PRP39 C-terminal HAT repeat
HAT PF02184 208 - 236 2e-12 HAT (Half-A-TPR) repeat
HAT_PRP39_N PF23240 268 - 383 5.8e-06 PRP39 N-terminal HAT repeat
HAT_PRP39_N PF23240 326 - 449 4.5e-06 PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 328 - 488 4.3e-15 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C PF23241 339 - 451 2.6e-08 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 395 - 546 1e-13 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 458 - 573 1.6e-08 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 459 - 557 1e-12 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 529 - 634 2.8e-08 PRP39 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1126
Acc36I ACCTGC 1 cut(s) 1126
AccB1I GGYRCC 1 cut(s) 106
AccB7I CCANNNNNTGG 1 cut(s) 1275
AccI GTMKAC 1 cut(s) 477
AccII CGCG 2 cut(s) 261, 263
AciI CCGC 3 cut(s) 12, 226, 1718
AclI AACGTT 2 cut(s) 441, 823
AclWI GGATC 6 cut(s) 163, 247, 456, 582, 784, 1085
AcsI RAATTY 2 cut(s) 239, 1256
AcuI CTGAAG 3 cut(s) 1215, 1385, 1874
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 6 cut(s) 31, 41, 491, 1210, 1666, 2003
AfiI CCNNNNNNNGG 5 cut(s) 235, 537, 799, 969, 1275
AflII CTTAAG 1 cut(s) 1235
AjnI CCWGG 1 cut(s) 1752
Alw21I GWGCWC 2 cut(s) 334, 1327
Alw26I GTCTC 3 cut(s) 148, 1461, 1509
AlwI GGATC 6 cut(s) 163, 247, 456, 582, 784, 1085
Ama87I CYCGRG 3 cut(s) 147, 1212, 1916
ApeKI GCWGC 5 cut(s) 1286, 1579, 1715, 2069, 2099
ApoI RAATTY 2 cut(s) 239, 1256
AseI ATTAAT 1 cut(s) 1164
AspLEI GCGC 2 cut(s) 109, 263
AspS9I GGNCC 1 cut(s) 1660
AsuHPI GGTGA 3 cut(s) 561, 731, 950
AsuII TTCGAA 1 cut(s) 606
AvaI CYCGRG 3 cut(s) 147, 1212, 1916
AvaII GGWCC 1 cut(s) 1660
AxyI CCTNAGG 1 cut(s) 34
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BanI GGYRCC 1 cut(s) 106
BauI CACGAG 3 cut(s) 84, 327, 471
BbsI GAAGAC 4 cut(s) 252, 1737, 1755, 1992
Bbv12I GWGCWC 2 cut(s) 334, 1327
BbvCI CCTCAGC 2 cut(s) 894, 1122
BbvI GCAGC 5 cut(s) 1273, 1566, 1702, 2056, 2086
BccI CCATC 2 cut(s) 261, 553
BciT130I CCWGG 1 cut(s) 1754
BclI TGATCA 1 cut(s) 871
BcoDI GTCTC 3 cut(s) 148, 1461, 1509
BfaI CTAG 7 cut(s) 537, 636, 846, 1496, 1527, 1724, 1980
BfmI CTRYAG 2 cut(s) 217, 756
BfoI RGCGCY 1 cut(s) 110
BfrI CTTAAG 1 cut(s) 1235
BfuAI ACCTGC 1 cut(s) 1126
BisI GCNGC 6 cut(s) 13, 1287, 1580, 1716, 2070, 2100
BlsI GCNGC 6 cut(s) 14, 1288, 1581, 1717, 2071, 2101
Bme1390I CCNGG 1 cut(s) 1754
Bme18I GGWCC 1 cut(s) 1660
BmeT110I CYCGRG 3 cut(s) 147, 1212, 1916
BmgT120I GGNCC 1 cut(s) 1660
BmiI GGNNCC 2 cut(s) 108, 374
BmrFI CCNGG 1 cut(s) 1754
BmsI GCATC 2 cut(s) 949, 1797
BpiI GAAGAC 4 cut(s) 252, 1737, 1755, 1992
BplI GAGNNNNNCTC 2 cut(s) 1857, 1889
Bpu10I CCTNAGC 3 cut(s) 894, 1122, 1575
Bpu14I TTCGAA 1 cut(s) 606
BpuEI CTTGAG 3 cut(s) 1469, 1943, 2039
Bsa29I ATCGAT 1 cut(s) 2016
BsaBI GATNNNNATC 1 cut(s) 24
BsaHI GRCGYC 1 cut(s) 107
BsaI GGTCTC 2 cut(s) 1461, 1509
BsaJI CCNNGG 2 cut(s) 672, 1915
BsaWI WCCGGW 1 cut(s) 571
BsaXI ACNNNNNCTCC 2 cut(s) 1823, 1853
Bsc4I CCNNNNNNNGG 5 cut(s) 235, 537, 799, 969, 1275
Bse1I ACTGG 1 cut(s) 1142
Bse21I CCTNAGG 1 cut(s) 34
Bse8I GATNNNNATC 1 cut(s) 24
BseBI CCWGG 1 cut(s) 1754
BseCI ATCGAT 1 cut(s) 2016
BseDI CCNNGG 2 cut(s) 672, 1915
BseGI GGATG 5 cut(s) 564, 667, 964, 1927, 2116
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 5 cut(s) 235, 537, 799, 969, 1275
BseNI ACTGG 1 cut(s) 1142
BseRI GAGGAG 3 cut(s) 524, 991, 1139
BseXI GCAGC 5 cut(s) 1273, 1566, 1702, 2056, 2086
BseYI CCCAGC 1 cut(s) 1554
Bsh1236I CGCG 2 cut(s) 261, 263
Bsh1285I CGRYCG 1 cut(s) 28
BshNI GGYRCC 1 cut(s) 106
BshVI ATCGAT 1 cut(s) 2016
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 2 cut(s) 334, 1327
BsiHKCI CYCGRG 3 cut(s) 147, 1212, 1916
BsiSI CCGG 5 cut(s) 9, 104, 229, 531, 572
BslI CCNNNNNNNGG 5 cut(s) 235, 537, 799, 969, 1275
BsmAI GTCTC 3 cut(s) 148, 1461, 1509
Bso31I GGTCTC 2 cut(s) 1461, 1509
BsoBI CYCGRG 3 cut(s) 147, 1212, 1916
Bsp119I TTCGAA 1 cut(s) 606
Bsp1286I GDGCHC 2 cut(s) 334, 1327
BspACI CCGC 3 cut(s) 12, 226, 1718
BspDI ATCGAT 1 cut(s) 2016
BspFNI CGCG 2 cut(s) 261, 263
BspLI GGNNCC 2 cut(s) 108, 374
BspMI ACCTGC 1 cut(s) 1126
BspPI GGATC 6 cut(s) 163, 247, 456, 582, 784, 1085
BspQI GCTCTTC 1 cut(s) 883
BspT104I TTCGAA 1 cut(s) 606
BspT107I GGYRCC 1 cut(s) 106
BspTI CTTAAG 1 cut(s) 1235
BspTNI GGTCTC 2 cut(s) 1461, 1509
BsrI ACTGG 1 cut(s) 1142
BssECI CCNNGG 2 cut(s) 672, 1915
BssNI GRCGYC 1 cut(s) 107
BssSI CACGAG 3 cut(s) 84, 327, 471
BssT1I CCWWGG 1 cut(s) 672
Bst2BI CACGAG 3 cut(s) 84, 327, 471
Bst2UI CCWGG 1 cut(s) 1754
Bst4CI ACNGT 5 cut(s) 431, 555, 933, 1443, 1664
Bst6I CTCTTC 6 cut(s) 300, 883, 968, 1001, 1047, 1176
BstACI GRCGYC 1 cut(s) 107
BstAFI CTTAAG 1 cut(s) 1235
BstBI TTCGAA 1 cut(s) 606
BstC8I GCNNGC 4 cut(s) 768, 1284, 1327, 1560
BstEII GGTNACC 2 cut(s) 567, 1910
BstF5I GGATG 5 cut(s) 564, 667, 964, 1927, 2116
BstFNI CGCG 2 cut(s) 261, 263
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 263
BstMAI GTCTC 3 cut(s) 148, 1461, 1509
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 2 cut(s) 1579, 1715
BstNI CCWGG 1 cut(s) 1754
BstNSI RCATGY 1 cut(s) 1573
BstPI GGTNACC 2 cut(s) 567, 1910
BstSCI CCNGG 1 cut(s) 1752
BstSFI CTRYAG 2 cut(s) 217, 756
BstUI CGCG 2 cut(s) 261, 263
BstV1I GCAGC 5 cut(s) 1273, 1566, 1702, 2056, 2086
BstV2I GAAGAC 4 cut(s) 252, 1737, 1755, 1992
BstX2I RGATCY 3 cut(s) 168, 252, 789
BstYI RGATCY 3 cut(s) 168, 252, 789
Bsu15I ATCGAT 1 cut(s) 2016
Bsu36I CCTNAGG 1 cut(s) 34
BsuTUI ATCGAT 1 cut(s) 2016
BtsCI GGATG 5 cut(s) 564, 667, 964, 1927, 2116
BtsIMutI CAGTG 3 cut(s) 192, 201, 436
BveI ACCTGC 1 cut(s) 1126
Cac8I GCNNGC 4 cut(s) 768, 1284, 1327, 1560
CfoI GCGC 2 cut(s) 109, 263
Cfr13I GGNCC 1 cut(s) 1660
ClaI ATCGAT 1 cut(s) 2016
Csp6I GTAC 6 cut(s) 30, 40, 490, 1209, 1665, 2002
CviAII CATG 4 cut(s) 43, 1414, 1570, 1894
CviQI GTAC 6 cut(s) 30, 40, 490, 1209, 1665, 2002
DinI GGCGCC 1 cut(s) 108
Eam1104I CTCTTC 6 cut(s) 300, 883, 968, 1001, 1047, 1176
EarI CTCTTC 6 cut(s) 300, 883, 968, 1001, 1047, 1176
EciI GGCGGA 1 cut(s) 215
Eco130I CCWWGG 1 cut(s) 672
Eco31I GGTCTC 2 cut(s) 1461, 1509
Eco32I GATATC 1 cut(s) 1611
Eco47I GGWCC 1 cut(s) 1660
Eco57I CTGAAG 3 cut(s) 1215, 1385, 1874
Eco81I CCTNAGG 1 cut(s) 34
Eco88I CYCGRG 3 cut(s) 147, 1212, 1916
Eco91I GGTNACC 2 cut(s) 567, 1910
EcoO65I GGTNACC 2 cut(s) 567, 1910
EcoRII CCWGG 1 cut(s) 1752
EcoRV GATATC 1 cut(s) 1611
EcoT14I CCWWGG 1 cut(s) 672
EcoT22I ATGCAT 1 cut(s) 1174
EgeI GGCGCC 1 cut(s) 108
EheI GGCGCC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 4 cut(s) 46, 1417, 1573, 1897
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FatI CATG 4 cut(s) 42, 1413, 1569, 1893
FauNDI CATATG 1 cut(s) 504
FbaI TGATCA 1 cut(s) 871
FblI GTMKAC 1 cut(s) 477
Fnu4HI GCNGC 6 cut(s) 13, 1287, 1580, 1716, 2070, 2100
FokI GGATG 4 cut(s) 571, 654, 971, 1934
Fsp4HI GCNGC 6 cut(s) 13, 1287, 1580, 1716, 2070, 2100
FspBI CTAG 7 cut(s) 537, 636, 846, 1496, 1527, 1724, 1980
GlaI GCGC 2 cut(s) 108, 262
GluI GCNGC 6 cut(s) 13, 1287, 1580, 1716, 2070, 2100
GsaI CCCAGC 1 cut(s) 1558
HaeII RGCGCY 1 cut(s) 110
HapII CCGG 5 cut(s) 9, 104, 229, 531, 572
HhaI GCGC 2 cut(s) 109, 263
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 4 cut(s) 46, 1417, 1573, 1897
Hin6I GCGC 2 cut(s) 107, 261
HinP1I GCGC 2 cut(s) 107, 261
HincII GTYRAC 1 cut(s) 1995
HindII GTYRAC 1 cut(s) 1995
HindIII AAGCTT 5 cut(s) 68, 764, 1238, 1707, 1943
HpaII CCGG 5 cut(s) 9, 104, 229, 531, 572
HphI GGTGA 3 cut(s) 561, 731, 950
Hpy166II GTNNAC 4 cut(s) 427, 478, 1222, 1995
Hpy188I TCNGA 5 cut(s) 25, 214, 1082, 1615, 2107
Hpy8I GTNNAC 4 cut(s) 427, 478, 1222, 1995
Hpy99I CGWCG 1 cut(s) 261
HpyAV CCTTC 8 cut(s) 353, 706, 941, 1023, 1582, 1610, 1849, 2086
HpyCH4III ACNGT 5 cut(s) 431, 555, 933, 1443, 1664
HpyCH4IV ACGT 5 cut(s) 441, 631, 751, 823, 1795
HpyCH4V TGCA 5 cut(s) 1172, 1547, 1697, 1788, 2072
HpyF10VI GCNNNNNNNGC 2 cut(s) 1579, 1715
HpySE526I ACGT 5 cut(s) 441, 631, 751, 823, 1795
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 4 cut(s) 46, 1417, 1573, 1897
HspAI GCGC 2 cut(s) 107, 261
KasI GGCGCC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 871
LguI GCTCTTC 1 cut(s) 883
LmnI GCTCC 3 cut(s) 533, 1363, 1479
Lsp1109I GCAGC 5 cut(s) 1273, 1566, 1702, 2056, 2086
LweI GCATC 2 cut(s) 949, 1797
MaeI CTAG 7 cut(s) 537, 636, 846, 1496, 1527, 1724, 1980
MaeII ACGT 5 cut(s) 441, 631, 751, 823, 1795
MaeIII GTNAC 4 cut(s) 309, 457, 567, 1910
MfeI CAATTG 1 cut(s) 1307
MflI RGATCY 3 cut(s) 168, 252, 789
MhlI GDGCHC 2 cut(s) 334, 1327
MluCI AATT 8 cut(s) 239, 624, 1165, 1256, 1307, 1465, 1622, 1806
Mly113I GGCGCC 1 cut(s) 107
MlyI GAGTC 5 cut(s) 216, 317, 1018, 1647, 1832
MmeI TCCRAC 2 cut(s) 237, 1041
Mph1103I ATGCAT 1 cut(s) 1174
MseI TTAA 4 cut(s) 137, 600, 1164, 1236
MslI CAYNNNNRTG 1 cut(s) 2077
MspCI CTTAAG 1 cut(s) 1235
MspI CCGG 5 cut(s) 9, 104, 229, 531, 572
MspR9I CCNGG 1 cut(s) 1754
MunI CAATTG 1 cut(s) 1307
MvaI CCWGG 1 cut(s) 1754
MvnI CGCG 2 cut(s) 261, 263
MwoI GCNNNNNNNGC 2 cut(s) 1579, 1715
NarI GGCGCC 1 cut(s) 107
NdeI CATATG 1 cut(s) 504
NlaIII CATG 4 cut(s) 46, 1417, 1573, 1897
NlaIV GGNNCC 2 cut(s) 108, 374
NmuCI GTSAC 2 cut(s) 309, 567
NsiI ATGCAT 1 cut(s) 1174
NspI RCATGY 1 cut(s) 1573
NspV TTCGAA 1 cut(s) 606
PaeR7I CTCGAG 1 cut(s) 147
PaqCI CACCTGC 1 cut(s) 1126
PciSI GCTCTTC 1 cut(s) 883
PcsI WCGNNNNNNNCGW 2 cut(s) 402, 2045
PfeI GAWTC 8 cut(s) 20, 112, 197, 1025, 1312, 2036, 2050, 2059
PflMI CCANNNNNTGG 1 cut(s) 1275
PkrI GCNGC 6 cut(s) 14, 1288, 1581, 1717, 2071, 2101
Ple19I CGATCG 1 cut(s) 28
PleI GAGTC 5 cut(s) 216, 316, 1017, 1647, 1832
PluTI GGCGCC 1 cut(s) 110
PpsI GAGTC 5 cut(s) 216, 316, 1017, 1647, 1832
PshBI ATTAAT 1 cut(s) 1164
Psp1406I AACGTT 2 cut(s) 441, 823
Psp6I CCWGG 1 cut(s) 1752
PspEI GGTNACC 2 cut(s) 567, 1910
PspFI CCCAGC 1 cut(s) 1554
PspGI CCWGG 1 cut(s) 1752
PspN4I GGNNCC 2 cut(s) 108, 374
PspPI GGNCC 1 cut(s) 1660
PsuI RGATCY 3 cut(s) 168, 252, 789
PvuI CGATCG 1 cut(s) 28
RsaI GTAC 6 cut(s) 31, 41, 491, 1210, 1666, 2003
RsaNI GTAC 6 cut(s) 30, 40, 490, 1209, 1665, 2002
RseI CAYNNNNRTG 1 cut(s) 2077
SapI GCTCTTC 1 cut(s) 883
SaqAI TTAA 4 cut(s) 137, 600, 1164, 1236
SatI GCNGC 6 cut(s) 13, 1287, 1580, 1716, 2070, 2100
Sau96I GGNCC 1 cut(s) 1660
SchI GAGTC 5 cut(s) 216, 317, 1018, 1647, 1832
ScrFI CCNGG 1 cut(s) 1754
SduI GDGCHC 2 cut(s) 334, 1327
SfaNI GCATC 2 cut(s) 949, 1797
SfcI CTRYAG 2 cut(s) 217, 756
SfoI GGCGCC 1 cut(s) 108
Sfr274I CTCGAG 1 cut(s) 147
SfuI TTCGAA 1 cut(s) 606
SinI GGWCC 1 cut(s) 1660
SlaI CTCGAG 1 cut(s) 147
SmiMI CAYNNNNRTG 1 cut(s) 2077
SmlI CTYRAG 5 cut(s) 147, 1235, 1448, 1958, 2054
SmoI CTYRAG 5 cut(s) 147, 1235, 1448, 1958, 2054
Sse9I AATT 8 cut(s) 239, 624, 1165, 1256, 1307, 1465, 1622, 1806
SsiI CCGC 3 cut(s) 12, 226, 1718
SspDI GGCGCC 1 cut(s) 106
SspMI CTAG 7 cut(s) 537, 636, 846, 1496, 1527, 1724, 1980
StyD4I CCNGG 1 cut(s) 1752
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 5 cut(s) 431, 555, 933, 1443, 1664
TaiI ACGT 5 cut(s) 444, 634, 754, 826, 1798
TasI AATT 8 cut(s) 239, 624, 1165, 1256, 1307, 1465, 1622, 1806
TauI GCSGC 1 cut(s) 15
TfiI GAWTC 8 cut(s) 20, 112, 197, 1025, 1312, 2036, 2050, 2059
Tru1I TTAA 4 cut(s) 137, 600, 1164, 1236
Tru9I TTAA 4 cut(s) 137, 600, 1164, 1236
TscAI CASTG 3 cut(s) 199, 208, 436
TseFI GTSAC 2 cut(s) 309, 567
TseI GCWGC 5 cut(s) 1286, 1579, 1715, 2069, 2099
Tsp45I GTSAC 2 cut(s) 309, 567
TspGWI ACGGA 3 cut(s) 64, 161, 245
TspRI CASTG 3 cut(s) 199, 208, 436
Van91I CCANNNNNTGG 1 cut(s) 1275
Vha464I CTTAAG 1 cut(s) 1235
VpaK11BI GGWCC 1 cut(s) 1660
VspI ATTAAT 1 cut(s) 1164
XapI RAATTY 2 cut(s) 239, 1256
XceI RCATGY 1 cut(s) 1573
XhoI CTCGAG 1 cut(s) 147
XmiI GTMKAC 1 cut(s) 477
XspI CTAG 7 cut(s) 537, 636, 846, 1496, 1527, 1724, 1980
Zsp2I ATGCAT 1 cut(s) 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.