Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002910

Physical Location & Seq

Genomic Coordinates Forward (+)

2421057 .. 2426772

Gene Structure 5716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g04070.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGGGTCATACAAGGACGCAGACCCTGCCCTAGGGTACCTAACCAAGAAGGATACGGAGGTCAAGCTACCGCGGCCGACTAGGGTTAAGAATAAGACCCCAGCCCCTGTTCAAATCACCGCCGAGCAAATCCTCCGGGAGGCTCGTGAGCGGCAGGAGGCGGAAATCCGGCCTCCCAAGCAGAAAATCACAGACCCGTCTGAGCTTGCGGATTATCGTCTGCGGAAACGGAAGGAGTTTGAGGATCTTATCCGGCGTGTGCGGTGGAATATCAGTGTTTGGATCAAGTATGCGCAGTGGGAGGAGTCCCAGAAGGATTTTAAGCGTGCGCGGTCAGTTTGGGAGCGTGCGCTTGAGGTGGATTATAGGAATCACACGCTGTGGCTGAAGTATGCGGAGGTGGAGATGAAGAACAAGTTCATTAACCATGCTAGGAATGTGTGGGACCGTGCTGTCCAGCTCTTGCCTAGAGTGGACCAGCTGTGGTACAAGTACATTCACATGGAGGAGATGATTGGGAATGTGGCTGGTGCTCGACAAGTTTACGAGAGGTGGATGACTTGGATGCCAGACCAGCAGGGCTGGCTCTCCTTCATCAAGTTTGAGCTTCGGTATAATGAAGTTGAGCGTGCTAGAGCCATTTTCGAGCGGTTTGTACAATGTCATCCGAAGGTTGCAGCTTGGATTCGGTTTGCAAAGTTTGAGATGAAGAATGGTGATGTTGCGAGGGCGAGGAATGTGTACGAGAGGGCAGTGGAGAAGTTAGCTGATGATGAGGAGGCCGAGGAGCTGTTTGTGGCTTTCGCTGAATTTGAAGAGCGGTGCAAAGAGACTGAGCGAGCTCGGTGTATCTATAAATTTGCACTGGATCATATACCCAAAGGAAGAGCTGAGGAATTGTATAAGAAGTTTGTATCTTTTGAGAAGCAATATGGGGATAGAGAAGGGATCGAGGATGCCATTGTGGGAAAGAGGAGGTTTCAGTATGAGGATGAGGTTAGGAAGAATCCTCTTAACTATGACTCCTGGTTTGATTATATAAGGCTAGAAGAGAGCGCAGGGAATAAGGACAGAATCAGAGAGGTTTATGAGCGAGCTGTGGCTAATGTTCCCCCGGCTCCTGAGAAGCGGTATTGGCAGCGATATATTTATCTGTGGATTAATTATGCACTTTATGAAGAACTTGATGCTGGAGATGTGGAACGTACACGAGATGTCTACAGGGAGTGCCTAAAGTTGATTCCTCATGAGAAATTTTCATTTGCAAAAATATGGCTTCTTGCTGCTCAGTTTGAGATACGGCAGCTAAATCTCAAGGGCGCACGCCAGATTCTTGGTAATGCAATTGGCAAGGCACCTAAAGATAAGATTTTCAAGAAATATATTGAGATTGAGCTGCAACTTGCAAATATAGATCGTTGTCGGAAGTTATATGAAAAGTATCTGGAGTGGGCACCACACAATTGTTACGCATGGAGCAAGTATGCAGAATTAGAGAAATCCTTGGGTGAGACAGAACGAGCAAGGTCCCTTTTTGAACTCGCCATCAGCCAATTAGAACTTGACATGCCTGAATTGTTATGGAAGGCATACATCGACTTTGAACTGTCAGAGTTTGACTTTGACAGAACTAGACAACTTTATGAGAGACTCCTAGACCGAACAAAACATCTAAAGGTGTGGATCAGTTATGCAAAATTTGAGGCATCTGCTATGGTGGGGGGTAATGATGAGGATTCAGAATTTGCAGAAGCTCCTTCCGAGGATGATATTATTGAAGAGAAGAAACAATGTATCGAGCGTGCTAGAAGGGTTTTCGAGAAAGCTCTTAACTATTTTAGAACTTCAGCACCCGAATTGAAGGAAGAAAGAGGTATGTTGTTAGAAGAATGGTTTAATATGGAGGCTAGCTTTGGGGATCTGGGTGATATCAGCCTTGTTCAATCTAAGCTGCCAAAGAAACTGAAGAAGAGGAGGGCAATTGAAACTGAAGACGGTCCTGCAGGGTATGAGGAATACATTGATTACCTGTTCCCTGAAGAAAGTCAGACGACAAATCTCAAGATTTTGGAAGCTGCCTACAAGTGGAAGAAGCAAAAACGTTCTTCTGATGAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0071007 GO:0071010 GO:0071011 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

HAT Suf TPR_8

Protein Analysis

707

Amino Acids

84.62

Weight (kDa)

6.42

Isoelectric Point (pI)

49.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_C	PF23241	76 - 191	9.2e-14	PRP39 C-terminal HAT repeat
HAT_PRP39_N	PF23240	77 - 187	6.9e-09	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	79 - 224	2.6e-17	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	92 - 153	3.6e-08	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	126 - 240	1.2e-10	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N	PF23240	173 - 304	1.6e-12	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	193 - 308	4.7e-13	PRP39 C-terminal HAT repeat
HAT	PF02184	207 - 235	8.3e-12	HAT (Half-A-TPR) repeat
HAT_Syf1_CNRKL1_C	PF23231	241 - 320	1.2e-10	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N	PF23240	324 - 449	1.5e-07	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	327 - 486	1.1e-13	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	340 - 450	1.2e-08	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	399 - 537	6.7e-13	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	457 - 571	2.2e-07	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N	PF23240	458 - 555	1.3e-11	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	528 - 570	6.9e-06	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13210 AT5G41770 AT5G45990 AT5G45990
fragaria_vesca	FvH4_3g03250 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070
malus_domestica	MD06G1102000.v1.1 MD14G1121300.v1.1
prunus_persica	Prupe.5G115100_v2.0.a1
pyrus_communis	pycom06g09690
rosa_chinensis	RchiOBHm_Chr5g0005001 RchiOBHm_Chr7g0195451
rosa_laevigata	RLG00000004120 RLG00000031279
rosa_multiflora	Rmu_co8413909.1_g000001 Rmu_sc0010714.1_g000003 Rmu_sc0016543.1_g000004 Rmu_sc0018163.1_g000001 Rmu_sc0020160.1_g000003
rosa_roxburghii	Rroxscaffold_3G00260470
rosa_rugosa	Rorug04G0415100 Rorug04G0460000 Rorug07G0023200
rosa_samantha	Rh5AG042700 Rh5BG042400 Rh5BG086900 Rh5BG087100 Rh5CG047200 Rh5DG042700 Rh7AG150800 Rh7BG152400 Rh7CG156000 Rh7DG151800
rosa_wichuraiana	Rw5G004150 Rw7G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	452
Acc16I	TGCGCA	1 cut(s)	294
Acc65I	GGTACC	1 cut(s)	36
AccB1I	GGYRCC	3 cut(s)	36, 1354, 1453
AccBSI	CCGCTC	3 cut(s)	151, 649, 820
AccI	GTMKAC	1 cut(s)	1218
AccII	CGCG	2 cut(s)	73, 331
AclI	AACGTT	1 cut(s)	2101
AclWI	GGATC	6 cut(s)	252, 290, 876, 956, 1691, 1926
AcoI	YGGCCR	1 cut(s)	74
AcsI	RAATTY	5 cut(s)	809, 857, 1253, 1697, 1742
AcuI	CTGAAG	5 cut(s)	407, 1830, 1985, 2010, 2058
AdeI	CACNNNGTG	1 cut(s)	381
AfaI	GTAC	6 cut(s)	38, 488, 494, 657, 743, 1207
AfiI	CCNNNNNNNGG	3 cut(s)	32, 139, 2085
AgsI	TTSAA	9 cut(s)	113, 815, 1375, 1538, 1604, 1778, 1861, 1943, 1985
AjnI	CCWGG	1 cut(s)	1025
Alw21I	GWGCWC	2 cut(s)	535, 844
Alw26I	GTCTC	3 cut(s)	824, 1505, 1642
AlwI	GGATC	6 cut(s)	252, 290, 876, 956, 1691, 1926
AlwNI	CAGNNNCTG	2 cut(s)	26, 107
AoxI	GGCC	3 cut(s)	74, 170, 780
ApeKI	GCWGC	7 cut(s)	677, 1138, 1283, 1303, 1396, 1951, 2075
ApoI	RAATTY	5 cut(s)	809, 857, 1253, 1697, 1742
ArsI	GACNNNNNNTTYG	2 cut(s)	1013, 1045
AseI	ATTAAT	1 cut(s)	1161
Asp700I	GAANNNNTTC	1 cut(s)	416
Asp718I	GGTACC	1 cut(s)	36
AspA2I	CCTAGG	1 cut(s)	31
AspLEI	GCGC	5 cut(s)	295, 331, 352, 1058, 1322
AspS9I	GGNCC	4 cut(s)	445, 475, 1527, 1997
AsuC2I	CCSGG	2 cut(s)	137, 1115
AsuHPI	GGTGA	4 cut(s)	109, 728, 1520, 1937
AsuNHI	GCTAGC	1 cut(s)	1907
AvaII	GGWCC	4 cut(s)	445, 475, 1527, 1997
AvrII	CCTAGG	1 cut(s)	31
BaeGI	GKGCMC	1 cut(s)	1456
BaeI	ACNNNNGTAYC	2 cut(s)	45, 78
BanI	GGYRCC	3 cut(s)	36, 1354, 1453
BanII	GRGCYC	1 cut(s)	844
BauI	CACGAG	2 cut(s)	144, 1209
BbsI	GAAGAC	1 cut(s)	1998
Bbv12I	GWGCWC	2 cut(s)	535, 844
BbvCI	CCTCAGC	1 cut(s)	891
BbvI	GCAGC	7 cut(s)	689, 1150, 1270, 1315, 1383, 1938, 2062
BccI	CCATC	1 cut(s)	1553
BceAI	ACGGC	1 cut(s)	1316
BciT130I	CCWGG	1 cut(s)	1027
BciVI	GTATCC	1 cut(s)	46
BcnI	CCSGG	2 cut(s)	137, 1115
BcoDI	GTCTC	3 cut(s)	824, 1505, 1642
BfmI	CTRYAG	2 cut(s)	1219, 2001
BfuI	GTATCC	1 cut(s)	46
BisI	GCNGC	9 cut(s)	74, 152, 678, 1139, 1284, 1304, 1397, 1952, 2076
BlnI	CCTAGG	1 cut(s)	31
BlsI	GCNGC	9 cut(s)	75, 153, 679, 1140, 1285, 1305, 1398, 1953, 2077
Bme1390I	CCNGG	3 cut(s)	137, 1027, 1115
Bme18I	GGWCC	4 cut(s)	445, 475, 1527, 1997
BmgT120I	GGNCC	4 cut(s)	445, 475, 1527, 1997
BmiI	GGNNCC	6 cut(s)	38, 446, 1119, 1356, 1455, 1529
BmrFI	CCNGG	3 cut(s)	137, 1027, 1115
BmsI	GCATC	4 cut(s)	555, 946, 1177, 1715
BmtI	GCTAGC	1 cut(s)	1911
BpiI	GAAGAC	1 cut(s)	1998
BpmI	CTGGAG	2 cut(s)	1212, 1466
Bpu10I	CCTNAGC	1 cut(s)	891
BpuEI	CTTGAG	3 cut(s)	374, 1298, 2045
BpuMI	CCSGG	2 cut(s)	137, 1115
BsaJI	CCNNGG	6 cut(s)	31, 71, 783, 1113, 1503, 1761
BsaXI	ACNNNNNCTCC	2 cut(s)	1007, 1037
Bsc4I	CCNNNNNNNGG	3 cut(s)	32, 139, 2085
Bse1I	ACTGG	1 cut(s)	870
BseBI	CCWGG	1 cut(s)	1027
BseDI	CCNNGG	6 cut(s)	31, 71, 783, 1113, 1503, 1761
BseGI	GGATG	6 cut(s)	561, 570, 664, 961, 997, 1771
BseLI	CCNNNNNNNGG	3 cut(s)	32, 139, 2085
BseMII	CTCAG	5 cut(s)	192, 825, 882, 1113, 1301
BseNI	ACTGG	1 cut(s)	870
BseRI	GAGGAG	6 cut(s)	317, 521, 791, 800, 988, 1987
BseSI	GKGCMC	1 cut(s)	1456
BseX3I	CGGCCG	1 cut(s)	74
BseXI	GCAGC	7 cut(s)	689, 1150, 1270, 1315, 1383, 1938, 2062
BseYI	CCCAGC	1 cut(s)	100
Bsh1236I	CGCG	2 cut(s)	73, 331
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	3 cut(s)	76, 172, 782
BshNI	GGYRCC	3 cut(s)	36, 1354, 1453
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	2 cut(s)	535, 844
BsiSI	CCGG	4 cut(s)	136, 169, 253, 1115
BslFI	GGGAC	3 cut(s)	292, 458, 1513
BslI	CCNNNNNNNGG	3 cut(s)	32, 139, 2085
BsmAI	GTCTC	3 cut(s)	824, 1505, 1642
BsmFI	GGGAC	3 cut(s)	292, 458, 1513
BsnI	GGCC	3 cut(s)	76, 172, 782
Bsp1286I	GDGCHC	3 cut(s)	535, 844, 1456
Bsp1407I	TGTACA	1 cut(s)	655
Bsp143I	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
BspANI	GGCC	3 cut(s)	76, 172, 782
BspCNI	CTCAG	5 cut(s)	193, 826, 883, 1114, 1300
BspFNI	CGCG	2 cut(s)	73, 331
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	6 cut(s)	38, 446, 1119, 1356, 1455, 1529
BspMAI	CTGCAG	1 cut(s)	2005
BspOI	GCTAGC	1 cut(s)	1911
BspPI	GGATC	6 cut(s)	252, 290, 876, 956, 1691, 1926
BspQI	GCTCTTC	2 cut(s)	810, 880
BspT107I	GGYRCC	3 cut(s)	36, 1354, 1453
BsrBI	CCGCTC	3 cut(s)	151, 649, 820
BsrGI	TGTACA	1 cut(s)	655
BsrI	ACTGG	1 cut(s)	870
BssECI	CCNNGG	6 cut(s)	31, 71, 783, 1113, 1503, 1761
BssMI	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
BssSI	CACGAG	2 cut(s)	144, 1209
BssT1I	CCWWGG	2 cut(s)	31, 1503
Bst2BI	CACGAG	2 cut(s)	144, 1209
Bst2UI	CCWGG	1 cut(s)	1027
Bst4CI	ACNGT	3 cut(s)	449, 1608, 1997
Bst6I	CTCTTC	5 cut(s)	810, 880, 1044, 1773, 1964
BstAPI	GCANNNNNTGC	1 cut(s)	26
BstAUI	TGTACA	1 cut(s)	655
BstDEI	CTNAG	6 cut(s)	201, 834, 891, 1122, 1287, 1947
BstDSI	CCRYGG	1 cut(s)	71
BstENI	CCTNNNNNAGG	2 cut(s)	30, 137
BstF5I	GGATG	6 cut(s)	561, 570, 664, 961, 997, 1771
BstFNI	CGCG	2 cut(s)	73, 331
BstHHI	GCGC	5 cut(s)	295, 331, 352, 1058, 1322
BstKTI	GATC	7 cut(s)	247, 285, 871, 951, 1417, 1686, 1921
BstMAI	GTCTC	3 cut(s)	824, 1505, 1642
BstMBI	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
BstNI	CCWGG	1 cut(s)	1027
BstNSI	RCATGY	1 cut(s)	1570
BstSCI	CCNGG	3 cut(s)	135, 1025, 1113
BstSFI	CTRYAG	2 cut(s)	1219, 2001
BstSLI	GKGCMC	1 cut(s)	1456
BstUI	CGCG	2 cut(s)	73, 331
BstV1I	GCAGC	7 cut(s)	689, 1150, 1270, 1315, 1383, 1938, 2062
BstV2I	GAAGAC	1 cut(s)	1998
BstX2I	RGATCY	2 cut(s)	244, 1918
BstXI	CCANNNNNNTGG	1 cut(s)	1334
BstYI	RGATCY	2 cut(s)	244, 1918
BstZI	CGGCCG	1 cut(s)	74
BsuI	GTATCC	1 cut(s)	46
BsuRI	GGCC	3 cut(s)	76, 172, 782
BtgI	CCRYGG	1 cut(s)	71
BtsCI	GGATG	6 cut(s)	561, 570, 664, 961, 997, 1771
BtsI	GCAGTG	2 cut(s)	302, 759
BtsIMutI	CAGTG	4 cut(s)	280, 302, 759, 863
CaiI	CAGNNNCTG	2 cut(s)	26, 107
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	5 cut(s)	295, 331, 352, 1058, 1322
Cfr13I	GGNCC	4 cut(s)	445, 475, 1527, 1997
Cfr42I	CCGCGG	1 cut(s)	74
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	6 cut(s)	37, 487, 493, 656, 742, 1206
CviAII	CATG	5 cut(s)	428, 502, 1247, 1473, 1567
CviQI	GTAC	6 cut(s)	37, 487, 493, 656, 742, 1206
DdeI	CTNAG	6 cut(s)	201, 834, 891, 1122, 1287, 1947
DpnI	GATC	7 cut(s)	246, 284, 870, 950, 1416, 1685, 1920
DpnII	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
DraIII	CACNNNGTG	1 cut(s)	381
DrdI	GACNNNNNNGTC	1 cut(s)	452
DseDI	GACNNNNNNGTC	1 cut(s)	452
EaeI	YGGCCR	1 cut(s)	74
EagI	CGGCCG	1 cut(s)	74
Eam1104I	CTCTTC	5 cut(s)	810, 880, 1044, 1773, 1964
EarI	CTCTTC	5 cut(s)	810, 880, 1044, 1773, 1964
EciI	GGCGGA	1 cut(s)	176
Ecl136II	GAGCTC	1 cut(s)	842
EclXI	CGGCCG	1 cut(s)	74
Eco130I	CCWWGG	2 cut(s)	31, 1503
Eco24I	GRGCYC	1 cut(s)	844
Eco32I	GATATC	1 cut(s)	1930
Eco47I	GGWCC	4 cut(s)	445, 475, 1527, 1997
Eco52I	CGGCCG	1 cut(s)	74
Eco53kI	GAGCTC	1 cut(s)	842
Eco57I	CTGAAG	5 cut(s)	407, 1830, 1985, 2010, 2058
EcoICRI	GAGCTC	1 cut(s)	842
EcoNI	CCTNNNNNAGG	2 cut(s)	30, 137
EcoO109I	RGGNCCY	1 cut(s)	1527
EcoRII	CCWGG	1 cut(s)	1025
EcoRV	GATATC	1 cut(s)	1930
EcoT14I	CCWWGG	2 cut(s)	31, 1503
EcoT38I	GRGCYC	1 cut(s)	844
ErhI	CCWWGG	2 cut(s)	31, 1503
FaeI	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
FaqI	GGGAC	3 cut(s)	292, 458, 1513
FatI	CATG	5 cut(s)	427, 501, 1246, 1472, 1566
FblI	GTMKAC	1 cut(s)	1218
Fnu4HI	GCNGC	9 cut(s)	74, 152, 678, 1139, 1284, 1304, 1397, 1952, 2076
FokI	GGATG	6 cut(s)	568, 577, 651, 968, 1004, 1778
FriOI	GRGCYC	1 cut(s)	844
Fsp4HI	GCNGC	9 cut(s)	74, 152, 678, 1139, 1284, 1304, 1397, 1952, 2076
FspI	TGCGCA	1 cut(s)	294
GlaI	GCGC	5 cut(s)	294, 330, 351, 1057, 1321
GluI	GCNGC	9 cut(s)	74, 152, 678, 1139, 1284, 1304, 1397, 1952, 2076
GsaI	CCCAGC	1 cut(s)	104
GsuI	CTGGAG	2 cut(s)	1212, 1466
HaeIII	GGCC	3 cut(s)	76, 172, 782
HapII	CCGG	4 cut(s)	136, 169, 253, 1115
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	5 cut(s)	295, 331, 352, 1058, 1322
Hin1II	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
Hin6I	GCGC	5 cut(s)	293, 329, 350, 1056, 1320
HinP1I	GCGC	5 cut(s)	293, 329, 350, 1056, 1320
HpaII	CCGG	4 cut(s)	136, 169, 253, 1115
HphI	GGTGA	4 cut(s)	109, 728, 1520, 1937
Hpy166II	GTNNAC	5 cut(s)	475, 544, 742, 1208, 1219
Hpy188I	TCNGA	9 cut(s)	202, 669, 1079, 1425, 1612, 1741, 1762, 2049, 2110
Hpy188III	TCNNGA	7 cut(s)	146, 1121, 1247, 1375, 1445, 1819, 2062
Hpy8I	GTNNAC	5 cut(s)	475, 544, 742, 1208, 1219
HpyCH4III	ACNGT	3 cut(s)	449, 1608, 1997
HpyCH4IV	ACGT	2 cut(s)	1204, 2101
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
HpyF3I	CTNAG	6 cut(s)	201, 834, 891, 1122, 1287, 1947
HpySE526I	ACGT	2 cut(s)	1204, 2101
Hsp92II	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
HspAI	GCGC	5 cut(s)	293, 329, 350, 1056, 1320
KpnI	GGTACC	1 cut(s)	40
KspI	CCGCGG	1 cut(s)	74
Kzo9I	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
LguI	GCTCTTC	2 cut(s)	810, 880
LmnI	GCTCC	5 cut(s)	343, 787, 1123, 1476, 1759
Lsp1109I	GCAGC	7 cut(s)	689, 1150, 1270, 1315, 1383, 1938, 2062
LweI	GCATC	4 cut(s)	555, 946, 1177, 1715
MaeII	ACGT	2 cut(s)	1204, 2101
MaeIII	GTNAC	1 cut(s)	1466
MalI	GATC	7 cut(s)	246, 284, 870, 950, 1416, 1685, 1920
MbiI	CCGCTC	3 cut(s)	151, 649, 820
MboI	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
MfeI	CAATTG	3 cut(s)	1344, 1462, 1980
MflI	RGATCY	2 cut(s)	244, 1918
MhlI	GDGCHC	3 cut(s)	535, 844, 1456
MlyI	GAGTC	3 cut(s)	314, 1016, 1644
MmeI	TCCRAC	1 cut(s)	1403
MroXI	GAANNNNTTC	1 cut(s)	416
MseI	TTAA	8 cut(s)	87, 321, 423, 1014, 1161, 1830, 1896, 2119
MslI	CAYNNNNRTG	1 cut(s)	500
MspA1I	CMGCKG	2 cut(s)	73, 481
MspI	CCGG	4 cut(s)	136, 169, 253, 1115
MspR9I	CCNGG	3 cut(s)	137, 1027, 1115
MunI	CAATTG	3 cut(s)	1344, 1462, 1980
MvaI	CCWGG	1 cut(s)	1027
MvnI	CGCG	2 cut(s)	73, 331
MwoI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
NciI	CCSGG	2 cut(s)	137, 1115
NdeII	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
NheI	GCTAGC	1 cut(s)	1907
NlaIII	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
NlaIV	GGNNCC	6 cut(s)	38, 446, 1119, 1356, 1455, 1529
NmeAIII	GCCGAG	2 cut(s)	148, 808
NsbI	TGCGCA	1 cut(s)	294
NspI	RCATGY	1 cut(s)	1570
PagI	TCATGA	1 cut(s)	1246
PciSI	GCTCTTC	2 cut(s)	810, 880
PdmI	GAANNNNTTC	1 cut(s)	416
PfeI	GAWTC	7 cut(s)	370, 685, 1006, 1074, 1240, 1330, 1736
PfoI	TCCNGGA	1 cut(s)	135
PkrI	GCNGC	9 cut(s)	75, 153, 679, 1140, 1285, 1305, 1398, 1953, 2077
PleI	GAGTC	3 cut(s)	313, 1016, 1644
PpsI	GAGTC	3 cut(s)	313, 1016, 1644
PpuMI	RGGWCCY	1 cut(s)	1527
PshBI	ATTAAT	1 cut(s)	1161
Psp124BI	GAGCTC	1 cut(s)	844
Psp1406I	AACGTT	1 cut(s)	2101
Psp5II	RGGWCCY	1 cut(s)	1527
Psp6I	CCWGG	1 cut(s)	1025
PspFI	CCCAGC	1 cut(s)	100
PspGI	CCWGG	1 cut(s)	1025
PspN4I	GGNNCC	6 cut(s)	38, 446, 1119, 1356, 1455, 1529
PspPI	GGNCC	4 cut(s)	445, 475, 1527, 1997
PspPPI	RGGWCCY	1 cut(s)	1527
PstI	CTGCAG	1 cut(s)	2005
PstNI	CAGNNNCTG	2 cut(s)	26, 107
PsuI	RGATCY	2 cut(s)	244, 1918
PvuII	CAGCTG	1 cut(s)	481
RsaI	GTAC	6 cut(s)	38, 488, 494, 657, 743, 1207
RsaNI	GTAC	6 cut(s)	37, 487, 493, 656, 742, 1206
RseI	CAYNNNNRTG	1 cut(s)	500
SacI	GAGCTC	1 cut(s)	844
SacII	CCGCGG	1 cut(s)	74
SapI	GCTCTTC	2 cut(s)	810, 880
SaqAI	TTAA	8 cut(s)	87, 321, 423, 1014, 1161, 1830, 1896, 2119
SatI	GCNGC	9 cut(s)	74, 152, 678, 1139, 1284, 1304, 1397, 1952, 2076
Sau3AI	GATC	7 cut(s)	244, 282, 868, 948, 1414, 1683, 1918
Sau96I	GGNCC	4 cut(s)	445, 475, 1527, 1997
SbfI	CCTGCAGG	1 cut(s)	2005
SchI	GAGTC	3 cut(s)	314, 1016, 1644
ScrFI	CCNGG	3 cut(s)	137, 1027, 1115
SdaI	CCTGCAGG	1 cut(s)	2005
SduI	GDGCHC	3 cut(s)	535, 844, 1456
SfaNI	GCATC	4 cut(s)	555, 946, 1177, 1715
SfcI	CTRYAG	2 cut(s)	1219, 2001
Sfr303I	CCGCGG	1 cut(s)	74
SgrBI	CCGCGG	1 cut(s)	74
SinI	GGWCC	4 cut(s)	445, 475, 1527, 1997
SmiMI	CAYNNNNRTG	1 cut(s)	500
SmlI	CTYRAG	3 cut(s)	353, 1313, 2060
SmoI	CTYRAG	3 cut(s)	353, 1313, 2060
Sse8387I	CCTGCAGG	1 cut(s)	2005
SstI	GAGCTC	1 cut(s)	844
StyD4I	CCNGG	3 cut(s)	135, 1025, 1113
StyI	CCWWGG	2 cut(s)	31, 1503
TaaI	ACNGT	3 cut(s)	449, 1608, 1997
TaiI	ACGT	2 cut(s)	1207, 2104
TaqI	TCGA	6 cut(s)	535, 645, 951, 1596, 1797, 1818
TaqII	GACCGA	1 cut(s)	1674
TatI	WGTACW	2 cut(s)	492, 655
TauI	GCSGC	2 cut(s)	76, 154
TfiI	GAWTC	7 cut(s)	370, 685, 1006, 1074, 1240, 1330, 1736
Tru1I	TTAA	8 cut(s)	87, 321, 423, 1014, 1161, 1830, 1896, 2119
Tru9I	TTAA	8 cut(s)	87, 321, 423, 1014, 1161, 1830, 1896, 2119
TscAI	CASTG	4 cut(s)	280, 302, 759, 870
TseI	GCWGC	7 cut(s)	677, 1138, 1283, 1303, 1396, 1951, 2075
TspDTI	ATGAA	8 cut(s)	409, 422, 583, 633, 722, 1191, 1248, 1449
TspGWI	ACGGA	2 cut(s)	71, 244
TspRI	CASTG	4 cut(s)	280, 302, 759, 870
VpaK11BI	GGWCC	4 cut(s)	445, 475, 1527, 1997
VspI	ATTAAT	1 cut(s)	1161
XagI	CCTNNNNNAGG	2 cut(s)	30, 137
XapI	RAATTY	5 cut(s)	809, 857, 1253, 1697, 1742
XceI	RCATGY	1 cut(s)	1570
XmaJI	CCTAGG	1 cut(s)	31
XmiI	GTMKAC	1 cut(s)	1218
XmnI	GAANNNNTTC	1 cut(s)	416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.