Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002910

Physical Location & Seq

Genomic Coordinates Reverse (-)

11266815 .. 11273589

Gene Structure 6775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG152400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGGCTCTTACAAGGATGCTGACCCAGCCCTAGGGTACCTAACCCGAAAGGATACGGAGGTCAAGCTACCACGGCCGACTAGGGTTAAGAATAAGACACCAGCCCCTGTTCAAATTACCGCCGAGCAAATCCTCCGGGAGGCTCGTGAGCGGCAGGAGGCGGAAATCCGGCCTCCCAAGCAGAAAATCACTGACCCATCTGAGCTTGCGGATTATCGTCTGCGAAAACGAAAGGAATTTGAGGATTTAATTCGGAGAGTGCGGTGGAATGTGAGTGTTTGGATCAAGTATGCACAGTGGGAGGAGTCCCAGAAGGACTTCAAGCGTGCACGGTCTGTTTGGGAGCGTGCCCTTGAGGTGGATTATCGGAATCATACGCTATGGCTCAAGTATGCGGAGGTGGAGATGAAGAACAAGTTCATTAATCATGCTAGGAATGTGTGGGACCGTGCTGTTCAACTCTTGCCTAGAGTGGACCAGCTCTGGTACAAGTACATTCACATGGAGGAGATGATTGGGAATGTGGCTGGTGCTCGGCAAATTTTTGAGAGGTGGATGACTTGGATGCCGGATCAGCAAGGCTGGCTCTCGTTCATCAAATTTGAGCTTCGGTATAATGAAGTTGAGCGTGCTAGAGCGATTTTCGAGCGGTTTGTACAATGTCATCCGAAAGTTGCAGCTTGGATTCGGTTTGCCAAATTTGAGATGAAGAATGGTGATGTTGCGAGGGCGAGGAATGTGTATGAGAGGGCAGTGGAGAAGTTAGCTGATGATGAGGAGGCCGAGCAGCTGTTTGTGGCTTTCGCTGAATTTGAAGAGCGGTGCAAAGAGACCGAGCGTGCTCGGTGTATCTATAAATTTGCACTGGATCACATACCCAAAGGAAGAGCTGAGGACTTGTATAAGAAGTTTGTATCTTTTGAGAAGCAATATGGCGATAGAGAAGGGATTGAGGATGCCATTGTGGGAAAGAGGAGGTTTCAGTATGAGGATGAGGTTAGGAAGAATCCTCTTAATTACGACTCTTGGTTTGATTATATAAGGCTGGAAGAGAGTGCAGGGAATAAGGACAGAATCAGAGAGGTTTATGAGCGAGCTGTAGCTAATGTTCCTCCTGCTCCTGAGAAGCGGTATTGGCAGCGATATATTTATCTGTGGATTAATTATGCACTTTACGAGGAACTTGATACTGGAGATGTGGAACGTACACGAGATGTCTATAGGGAGTGCCTTAAATTGATTCCTCATGAGAAATTTTCATTTGCAAAAATATGGCTTCTTGCTGCTCAGTTTGAGATACGGCAGCTAAATCTCACGGGTGCACGCCAGATTCTTGGTACTGCAATAGGCAAGGCACCAAAAGATAAGATTTTCAAGAAGTATATTGAGATTGAGCTGCAACTTGCAAATATAGATCGTTGTCGGAAGTTATATGAAAAGTATCTAGAGTGGGCACCACACAATTGCTATGCATGGAGCAAGTATGCAGAGTTAGAGAAATCTTTGGGTGAGACAGAACGAGCAAGGGCCCTTTTTGAACTCGCCATCAGCCAATTAGAACTTGACATGCCTGAATTGTTATGGAAGGCATACATTGACTTTGAACTGTCAGAATTTGAGTTTGAAAGAACCAGACAACTTTATGAGAGACTCCTAGACCGGACAAAACATCTAAAGGTGTGGATCAGTTATGCAAAATTTGAGGCATCCGCTATGGTGGGGGGGAATGATGAGGATTCAGATTTGGCAGAAGCTCCTTCCGAGGATGATATAATTGAAGAGAAGAAACAATGTATTGAGCGTGCTAGAAGTAAGCAGTTTCTAATAATGTTATATAGTTTATTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0071007 GO:0071010 GO:0071011 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

HAT Suf TPR_8

Protein Analysis

616

Amino Acids

74.06

Weight (kDa)

7.54

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_C	PF23241	76 - 191	7.9e-14	PRP39 C-terminal HAT repeat
HAT_PRP39_N	PF23240	77 - 187	7e-09	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	79 - 224	4.3e-18	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
Suf	PF05843	80 - 319	9e-12	Suppressor of forked protein (Suf)
HAT_Syf1_CNRKL1_C	PF23231	92 - 153	3.6e-08	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	126 - 240	1.4e-10	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N	PF23240	174 - 304	4.5e-12	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	193 - 294	4.3e-13	PRP39 C-terminal HAT repeat
HAT	PF02184	207 - 235	7.4e-12	HAT (Half-A-TPR) repeat
HAT_Syf1_CNRKL1_C	PF23231	241 - 321	9.5e-11	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N	PF23240	324 - 447	2.5e-07	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	327 - 486	1e-14	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	339 - 449	1.8e-08	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	399 - 537	8.2e-13	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N	PF23240	458 - 555	2.9e-11	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	459 - 571	2.9e-07	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13210 AT5G41770 AT5G45990 AT5G45990
fragaria_vesca	FvH4_3g03250 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070
malus_domestica	MD06G1102000.v1.1 MD14G1121300.v1.1
prunus_persica	Prupe.5G115100_v2.0.a1
pyrus_communis	pycom06g09690
rosa_chinensis	RchiOBHm_Chr5g0005001 RchiOBHm_Chr7g0195451
rosa_laevigata	RLG00000004120 RLG00000031279
rosa_multiflora	Rmu_co8413909.1_g000001 Rmu_sc0010714.1_g000003 Rmu_sc0016543.1_g000004 Rmu_sc0018163.1_g000001 Rmu_sc0020160.1_g000003
rosa_roxburghii	Rroxscaffold_3G00260470
rosa_rugosa	Rorug04G0415100 Rorug04G0460000 Rorug07G0023200
rosa_samantha	Rh5AG042700 Rh5BG042400 Rh5BG086900 Rh5BG087100 Rh5CG047200 Rh5DG042700 Rh7AG150800 Rh7BG152400 Rh7CG156000 Rh7DG151800
rosa_wichuraiana	Rw5G004150 Rw7G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	36
AccB1I	GGYRCC	3 cut(s)	36, 1354, 1453
AccBSI	CCGCTC	3 cut(s)	151, 649, 820
AclWI	GGATC	4 cut(s)	290, 579, 876, 1691
AcoI	YGGCCR	1 cut(s)	74
AcsI	RAATTY	9 cut(s)	236, 540, 599, 698, 809, 857, 1253, 1613, 1697
AfaI	GTAC	6 cut(s)	38, 488, 494, 657, 1207, 1339
AfiI	CCNNNNNNNGG	3 cut(s)	32, 139, 358
AgsI	TTSAA	9 cut(s)	113, 322, 458, 815, 1375, 1538, 1604, 1625, 1778
Alw21I	GWGCWC	4 cut(s)	331, 535, 844, 1324
Alw26I	GTCTC	3 cut(s)	824, 1505, 1642
Alw44I	GTGCAC	2 cut(s)	327, 1320
AlwI	GGATC	4 cut(s)	290, 579, 876, 1691
AlwNI	CAGNNNCTG	1 cut(s)	107
AoxI	GGCC	4 cut(s)	74, 170, 780, 1527
ApaI	GGGCCC	1 cut(s)	1531
ApaLI	GTGCAC	2 cut(s)	327, 1320
ApeKI	GCWGC	6 cut(s)	677, 787, 1138, 1283, 1303, 1396
ApoI	RAATTY	9 cut(s)	236, 540, 599, 698, 809, 857, 1253, 1613, 1697
ArsI	GACNNNNNNTTYG	2 cut(s)	1013, 1045
AseI	ATTAAT	2 cut(s)	423, 1161
Asp700I	GAANNNNTTC	2 cut(s)	317, 416
Asp718I	GGTACC	1 cut(s)	36
AspA2I	CCTAGG	1 cut(s)	31
AspS9I	GGNCC	4 cut(s)	445, 475, 1527, 1528
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	2 cut(s)	728, 1520
AvaII	GGWCC	2 cut(s)	445, 475
AvrII	CCTAGG	1 cut(s)	31
BaeGI	GKGCMC	5 cut(s)	331, 352, 1324, 1456, 1531
BaeI	ACNNNNGTAYC	2 cut(s)	45, 78
BanI	GGYRCC	3 cut(s)	36, 1354, 1453
BanII	GRGCYC	2 cut(s)	8, 1531
BauI	CACGAG	2 cut(s)	144, 1209
Bbv12I	GWGCWC	4 cut(s)	331, 535, 844, 1324
BbvCI	CCTCAGC	1 cut(s)	891
BbvI	GCAGC	6 cut(s)	689, 799, 1150, 1270, 1315, 1383
BccI	CCATC	2 cut(s)	205, 1553
BceAI	ACGGC	2 cut(s)	89, 1316
BciVI	GTATCC	1 cut(s)	46
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	3 cut(s)	824, 1505, 1642
BfaI	CTAG	8 cut(s)	32, 81, 432, 468, 633, 1445, 1655, 1806
BfmI	CTRYAG	2 cut(s)	1098, 1219
BfuI	GTATCC	1 cut(s)	46
BisI	GCNGC	7 cut(s)	152, 678, 788, 1139, 1284, 1304, 1397
BlnI	CCTAGG	1 cut(s)	31
BlsI	GCNGC	7 cut(s)	153, 679, 789, 1140, 1285, 1305, 1398
Bme1390I	CCNGG	1 cut(s)	137
Bme18I	GGWCC	2 cut(s)	445, 475
BmgT120I	GGNCC	4 cut(s)	445, 475, 1527, 1528
BmiI	GGNNCC	5 cut(s)	38, 446, 1356, 1455, 1529
BmrFI	CCNGG	1 cut(s)	137
BmsI	GCATC	4 cut(s)	7, 555, 946, 1715
BpmI	CTGGAG	1 cut(s)	1212
Bpu10I	CCTNAGC	1 cut(s)	891
BpuEI	CTTGAG	2 cut(s)	371, 374
BpuMI	CCSGG	1 cut(s)	137
BsaI	GGTCTC	1 cut(s)	824
BsaJI	CCNNGG	3 cut(s)	31, 71, 1761
BsaWI	WCCGGW	1 cut(s)	1659
Bsc4I	CCNNNNNNNGG	3 cut(s)	32, 139, 358
Bse1I	ACTGG	2 cut(s)	870, 1195
BseDI	CCNNGG	3 cut(s)	31, 71, 1761
BseGI	GGATG	8 cut(s)	22, 561, 570, 664, 961, 997, 1706, 1771
BseLI	CCNNNNNNNGG	3 cut(s)	32, 139, 358
BseMII	CTCAG	4 cut(s)	192, 882, 1113, 1301
BseNI	ACTGG	2 cut(s)	870, 1195
BseRI	GAGGAG	4 cut(s)	317, 521, 791, 988
BseSI	GKGCMC	5 cut(s)	331, 352, 1324, 1456, 1531
BseX3I	CGGCCG	1 cut(s)	74
BseXI	GCAGC	6 cut(s)	689, 799, 1150, 1270, 1315, 1383
BseYI	CCCAGC	1 cut(s)	25
BsgI	GTGCAG	1 cut(s)	1077
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	4 cut(s)	76, 172, 782, 1529
BshNI	GGYRCC	3 cut(s)	36, 1354, 1453
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	4 cut(s)	331, 535, 844, 1324
BsiSI	CCGG	4 cut(s)	136, 169, 569, 1660
BslFI	GGGAC	2 cut(s)	292, 458
BslI	CCNNNNNNNGG	3 cut(s)	32, 139, 358
BsmAI	GTCTC	3 cut(s)	824, 1505, 1642
BsmFI	GGGAC	2 cut(s)	292, 458
BsnI	GGCC	4 cut(s)	76, 172, 782, 1529
Bso31I	GGTCTC	1 cut(s)	824
Bsp120I	GGGCCC	1 cut(s)	1527
Bsp1286I	GDGCHC	8 cut(s)	8, 331, 352, 535, 844, 1324, 1456, 1531
Bsp1407I	TGTACA	1 cut(s)	655
Bsp143I	GATC	5 cut(s)	282, 571, 868, 1414, 1683
BspANI	GGCC	4 cut(s)	76, 172, 782, 1529
BspCNI	CTCAG	4 cut(s)	193, 883, 1114, 1300
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	5 cut(s)	38, 446, 1356, 1455, 1529
BspPI	GGATC	4 cut(s)	290, 579, 876, 1691
BspQI	GCTCTTC	2 cut(s)	810, 880
BspT107I	GGYRCC	3 cut(s)	36, 1354, 1453
BspTNI	GGTCTC	1 cut(s)	824
BsrBI	CCGCTC	3 cut(s)	151, 649, 820
BsrGI	TGTACA	1 cut(s)	655
BsrI	ACTGG	2 cut(s)	870, 1195
BssECI	CCNNGG	3 cut(s)	31, 71, 1761
BssMI	GATC	5 cut(s)	282, 571, 868, 1414, 1683
BssSI	CACGAG	2 cut(s)	144, 1209
BssT1I	CCWWGG	1 cut(s)	31
Bst2BI	CACGAG	2 cut(s)	144, 1209
Bst4CI	ACNGT	4 cut(s)	297, 333, 449, 1608
Bst6I	CTCTTC	4 cut(s)	810, 880, 1044, 1773
BstAUI	TGTACA	1 cut(s)	655
BstC8I	GCNNGC	9 cut(s)	207, 327, 348, 584, 630, 840, 1095, 1324, 1803
BstDEI	CTNAG	4 cut(s)	201, 891, 1122, 1287
BstDSI	CCRYGG	1 cut(s)	71
BstENI	CCTNNNNNAGG	1 cut(s)	137
BstF5I	GGATG	8 cut(s)	22, 561, 570, 664, 961, 997, 1706, 1771
BstKTI	GATC	5 cut(s)	285, 574, 871, 1417, 1686
BstMAI	GTCTC	3 cut(s)	824, 1505, 1642
BstMBI	GATC	5 cut(s)	282, 571, 868, 1414, 1683
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
BstNSI	RCATGY	1 cut(s)	1570
BstSCI	CCNGG	1 cut(s)	135
BstSFI	CTRYAG	2 cut(s)	1098, 1219
BstSLI	GKGCMC	5 cut(s)	331, 352, 1324, 1456, 1531
BstV1I	GCAGC	6 cut(s)	689, 799, 1150, 1270, 1315, 1383
BstXI	CCANNNNNNTGG	1 cut(s)	1334
BstZI	CGGCCG	1 cut(s)	74
BsuI	GTATCC	1 cut(s)	46
BsuRI	GGCC	4 cut(s)	76, 172, 782, 1529
BtgI	CCRYGG	1 cut(s)	71
BtsCI	GGATG	8 cut(s)	22, 561, 570, 664, 961, 997, 1706, 1771
BtsI	GCAGTG	1 cut(s)	759
BtsIMutI	CAGTG	4 cut(s)	189, 302, 759, 863
Cac8I	GCNNGC	9 cut(s)	207, 327, 348, 584, 630, 840, 1095, 1324, 1803
CaiI	CAGNNNCTG	1 cut(s)	107
CciI	TCATGA	1 cut(s)	1246
Cfr13I	GGNCC	4 cut(s)	445, 475, 1527, 1528
Csp6I	GTAC	6 cut(s)	37, 487, 493, 656, 1206, 1338
CviAII	CATG	5 cut(s)	428, 502, 1247, 1473, 1567
CviQI	GTAC	6 cut(s)	37, 487, 493, 656, 1206, 1338
DdeI	CTNAG	4 cut(s)	201, 891, 1122, 1287
DpnI	GATC	5 cut(s)	284, 573, 870, 1416, 1685
DpnII	GATC	5 cut(s)	282, 571, 868, 1414, 1683
EaeI	YGGCCR	1 cut(s)	74
EagI	CGGCCG	1 cut(s)	74
Eam1104I	CTCTTC	4 cut(s)	810, 880, 1044, 1773
EarI	CTCTTC	4 cut(s)	810, 880, 1044, 1773
EciI	GGCGGA	1 cut(s)	176
EclXI	CGGCCG	1 cut(s)	74
Eco130I	CCWWGG	1 cut(s)	31
Eco24I	GRGCYC	2 cut(s)	8, 1531
Eco31I	GGTCTC	1 cut(s)	824
Eco47I	GGWCC	2 cut(s)	445, 475
Eco52I	CGGCCG	1 cut(s)	74
EcoNI	CCTNNNNNAGG	1 cut(s)	137
EcoO109I	RGGNCCY	2 cut(s)	1527, 1528
EcoT14I	CCWWGG	1 cut(s)	31
EcoT22I	ATGCAT	1 cut(s)	1474
EcoT38I	GRGCYC	2 cut(s)	8, 1531
ErhI	CCWWGG	1 cut(s)	31
FaeI	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
FaqI	GGGAC	2 cut(s)	292, 458
FatI	CATG	5 cut(s)	427, 501, 1246, 1472, 1566
Fnu4HI	GCNGC	7 cut(s)	152, 678, 788, 1139, 1284, 1304, 1397
FokI	GGATG	8 cut(s)	29, 568, 577, 651, 968, 1004, 1693, 1778
FriOI	GRGCYC	2 cut(s)	8, 1531
Fsp4HI	GCNGC	7 cut(s)	152, 678, 788, 1139, 1284, 1304, 1397
FspBI	CTAG	8 cut(s)	32, 81, 432, 468, 633, 1445, 1655, 1806
GluI	GCNGC	7 cut(s)	152, 678, 788, 1139, 1284, 1304, 1397
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	1 cut(s)	1212
HaeIII	GGCC	4 cut(s)	76, 172, 782, 1529
HapII	CCGG	4 cut(s)	136, 169, 569, 1660
Hin1II	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
HpaII	CCGG	4 cut(s)	136, 169, 569, 1660
HphI	GGTGA	2 cut(s)	728, 1520
Hpy166II	GTNNAC	4 cut(s)	329, 475, 1208, 1322
Hpy188I	TCNGA	9 cut(s)	202, 255, 369, 669, 1079, 1425, 1612, 1741, 1762
Hpy188III	TCNNGA	5 cut(s)	146, 1121, 1247, 1375, 1445
Hpy8I	GTNNAC	4 cut(s)	329, 475, 1208, 1322
HpyAV	CCTTC	4 cut(s)	307, 938, 1579, 1767
HpyCH4III	ACNGT	4 cut(s)	297, 333, 449, 1608
HpyCH4IV	ACGT	1 cut(s)	1204
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
HpyF3I	CTNAG	4 cut(s)	201, 891, 1122, 1287
HpySE526I	ACGT	1 cut(s)	1204
Hsp92II	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
KpnI	GGTACC	1 cut(s)	40
Kzo9I	GATC	5 cut(s)	282, 571, 868, 1414, 1683
LguI	GCTCTTC	2 cut(s)	810, 880
LmnI	GCTCC	4 cut(s)	343, 1123, 1476, 1759
Lsp1109I	GCAGC	6 cut(s)	689, 799, 1150, 1270, 1315, 1383
LweI	GCATC	4 cut(s)	7, 555, 946, 1715
MaeI	CTAG	8 cut(s)	32, 81, 432, 468, 633, 1445, 1655, 1806
MaeII	ACGT	1 cut(s)	1204
MalI	GATC	5 cut(s)	284, 573, 870, 1416, 1685
MbiI	CCGCTC	3 cut(s)	151, 649, 820
MboI	GATC	5 cut(s)	282, 571, 868, 1414, 1683
MboII	GAAGA	8 cut(s)	421, 721, 827, 897, 1015, 1061, 1790, 1795
MfeI	CAATTG	1 cut(s)	1462
MhlI	GDGCHC	8 cut(s)	8, 331, 352, 535, 844, 1324, 1456, 1531
MlyI	GAGTC	3 cut(s)	314, 1016, 1644
MmeI	TCCRAC	1 cut(s)	1403
Mph1103I	ATGCAT	1 cut(s)	1474
MroXI	GAANNNNTTC	2 cut(s)	317, 416
MseI	TTAA	6 cut(s)	87, 248, 423, 1014, 1161, 1233
MslI	CAYNNNNRTG	1 cut(s)	500
MspA1I	CMGCKG	1 cut(s)	790
MspI	CCGG	4 cut(s)	136, 169, 569, 1660
MspR9I	CCNGG	1 cut(s)	137
MunI	CAATTG	1 cut(s)	1462
MwoI	GCNNNNNNNGC	6 cut(s)	26, 73, 178, 574, 583, 1135
NciI	CCSGG	1 cut(s)	137
NdeII	GATC	5 cut(s)	282, 571, 868, 1414, 1683
NlaIII	CATG	5 cut(s)	431, 505, 1250, 1476, 1570
NlaIV	GGNNCC	5 cut(s)	38, 446, 1356, 1455, 1529
NmeAIII	GCCGAG	3 cut(s)	148, 514, 808
NsiI	ATGCAT	1 cut(s)	1474
NspI	RCATGY	1 cut(s)	1570
PagI	TCATGA	1 cut(s)	1246
PciSI	GCTCTTC	2 cut(s)	810, 880
PdmI	GAANNNNTTC	2 cut(s)	317, 416
PfeI	GAWTC	7 cut(s)	370, 685, 1006, 1074, 1240, 1330, 1736
PfoI	TCCNGGA	1 cut(s)	135
PkrI	GCNGC	7 cut(s)	153, 679, 789, 1140, 1285, 1305, 1398
PleI	GAGTC	3 cut(s)	313, 1016, 1644
PpsI	GAGTC	3 cut(s)	313, 1016, 1644
PshBI	ATTAAT	2 cut(s)	423, 1161
PspFI	CCCAGC	1 cut(s)	25
PspN4I	GGNNCC	5 cut(s)	38, 446, 1356, 1455, 1529
PspOMI	GGGCCC	1 cut(s)	1527
PspPI	GGNCC	4 cut(s)	445, 475, 1527, 1528
PsrI	GAACNNNNNNTAC	2 cut(s)	1092, 1124
PstNI	CAGNNNCTG	1 cut(s)	107
PvuII	CAGCTG	1 cut(s)	790
RsaI	GTAC	6 cut(s)	38, 488, 494, 657, 1207, 1339
RsaNI	GTAC	6 cut(s)	37, 487, 493, 656, 1206, 1338
RseI	CAYNNNNRTG	1 cut(s)	500
SapI	GCTCTTC	2 cut(s)	810, 880
SaqAI	TTAA	6 cut(s)	87, 248, 423, 1014, 1161, 1233
SatI	GCNGC	7 cut(s)	152, 678, 788, 1139, 1284, 1304, 1397
Sau3AI	GATC	5 cut(s)	282, 571, 868, 1414, 1683
Sau96I	GGNCC	4 cut(s)	445, 475, 1527, 1528
SchI	GAGTC	3 cut(s)	314, 1016, 1644
ScrFI	CCNGG	1 cut(s)	137
SduI	GDGCHC	8 cut(s)	8, 331, 352, 535, 844, 1324, 1456, 1531
SfaNI	GCATC	4 cut(s)	7, 555, 946, 1715
SfcI	CTRYAG	2 cut(s)	1098, 1219
SinI	GGWCC	2 cut(s)	445, 475
SmiMI	CAYNNNNRTG	1 cut(s)	500
SmlI	CTYRAG	2 cut(s)	353, 386
SmoI	CTYRAG	2 cut(s)	353, 386
SspMI	CTAG	8 cut(s)	32, 81, 432, 468, 633, 1445, 1655, 1806
StyD4I	CCNGG	1 cut(s)	135
StyI	CCWWGG	1 cut(s)	31
TaaI	ACNGT	4 cut(s)	297, 333, 449, 1608
TaiI	ACGT	1 cut(s)	1207
TaqI	TCGA	1 cut(s)	645
TaqII	GACCGA	1 cut(s)	848
TatI	WGTACW	2 cut(s)	492, 655
TauI	GCSGC	1 cut(s)	154
TfiI	GAWTC	7 cut(s)	370, 685, 1006, 1074, 1240, 1330, 1736
Tru1I	TTAA	6 cut(s)	87, 248, 423, 1014, 1161, 1233
Tru9I	TTAA	6 cut(s)	87, 248, 423, 1014, 1161, 1233
TscAI	CASTG	4 cut(s)	196, 302, 759, 870
TseI	GCWGC	6 cut(s)	677, 787, 1138, 1283, 1303, 1396
TspDTI	ATGAA	7 cut(s)	409, 422, 583, 633, 722, 1248, 1449
TspGWI	ACGGA	1 cut(s)	71
TspRI	CASTG	4 cut(s)	196, 302, 759, 870
VneI	GTGCAC	2 cut(s)	327, 1320
VpaK11BI	GGWCC	2 cut(s)	445, 475
VspI	ATTAAT	2 cut(s)	423, 1161
XagI	CCTNNNNNAGG	1 cut(s)	137
XapI	RAATTY	9 cut(s)	236, 540, 599, 698, 809, 857, 1253, 1613, 1697
XbaI	TCTAGA	1 cut(s)	1444
XceI	RCATGY	1 cut(s)	1570
XmaJI	CCTAGG	1 cut(s)	31
XmnI	GAANNNNTTC	2 cut(s)	317, 416
XspI	CTAG	8 cut(s)	32, 81, 432, 468, 633, 1445, 1655, 1806
Zsp2I	ATGCAT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.