Rh5BG042400

Crooked neck-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0002910
Physical Location & Seq
Reverse (-)
3185987 .. 3188160
2174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG042400.1

Sequence Viewer

Length: 1962 bp
ATGGTCTCTGACAAAGACGCAGACGACCTAACACGAAAGAATAAGAAGGTCAACCTACCAAGACCGAGTAGGGTTAAGAACAAAACACCAGCCCCTATTCAAATCACCGCCGAGCAAATCGTCCGGGAGGCCCGTGAGCAACAGGAGCCAGAATTCCGACCTCCCAAACAGAAAATCACAGACCCAACTGAGCTTGCAGATGATCGTCTCCGAGAACGTAAGCAATTCGAGGACCAAGTCCGGCGAGCAAGGCAGGATATCAGTGTGTGGATCAGGTATGCAACATGGGAGGAAAAGGAGGACTTGAACCGTGCAAGCTCTGTTTGGGAGCGAGCCCTCAAAGTCGATTATAGGAACCACACGCTGTGGATCAAGTATGCGGAGATGGAGATGAAGAACAAGTACATCGACCATGCTAGGAATGTGTTGGACCGTGCCGTCCAACTCTTGCCTAGAGCGGACCAGCTTTGGTACAAGTACATTCATATGGAAGAGATGACTGGGAATGTAGCCGGTGCTCGACAGATTTTTGAGAGGTGGATGACTTGGATGCCGGAGCAGGAAGGCTGGCACTCGTATGTCAAGTTTGAGGTCCGGTATAACGAAGTTGAGCGTGCTAGAGCGATTTTCGAGAGGTTTGTACAGTGTCATCCTGGAGTTGGAGCTTGGATCCGGTATGCCAAGTTTGAGGTGAAGAATGGTGGTGATGTTGTAAGGGCTAGGAAAGTGTATGAGAGGGCAGTGGAGATTCTAGCTGATGATGAGGAGGCCGAGCAGCTGTTTTTGGCTTTCGCTGAGTTCGAAGAGAAGTGCAAAGATATTGATCGAGCAAGGTGTGTTTATAAATTTGCATTGGATCGAATACCGAAAGGAAGAGCACAGGATTTGTATAAGAAGTTTGTGTGTTTTGAGAAGCGATATGGGGATAGAGAAGGGATTGAGGATGCGGTTGTGGGAACAAGGAGGTTTGAGTATGAGGATGAGATTAGGAAGAATCCTCTAAACTACGACTCCTGGTTCGATTACATAAGGCTAGAAGAGAGTGCAGGTAATAAGGAAAGAATCCGAGAGGTTTACGAGAGAGCTGTTGCTAATGTTCCTCCAGCTAATGAGAAGCGGTATTGGAAGCGATATATTTATCTGTGGATTAACTATGCACTATATGAGGAGCTTGATACCGGAGATGTGGAACGTGCACGAGAGGTCTATAGAGAGTGCCTTAATCTGATTCCTCATAAGAAATTCTCATTTGCGAAAATATGGATTCTAGCTGCCGAGTTTGAGATTCGACAGCTGAATCTCACCAGTACTGCTATAGGCAAGGCACCTAAAGAGAAGATATTTAAGAAGTACATTGAGATTGAGCTGCAACTTGCAAAGATAGATCGTTGTCGGAAGTTGTATGATAAGTATCTGCTTTGGAATGCGCAGAGTTGTTATGCTTGGATCAAGTATGCAGAGTTTGAGAAATCTTTAGGTGAAACAGAACGAGCAAGGGCACTTTTTGAACTCGCAATCAGCCAACTAGAACTTGACAATCCTGAATTGGTGTGGATCAGTTATGCAAAATTTGAGGCAGAAGCTCCTGCCAAGGATGATGATGATCTTCTTGAAGAGAAGAGACAATGCATCAAGCGTGCTAGAAGGGTTTTTGAGAGAGCTCTTGACTATTTTATAACTTCAGCACCTGATAAGAAGGAAGAAAGAAGCATGTTGCTAGAAGAATGGTTGAATATGGAGGTTAGCTTTGGGGATCTGGGTGGTGTAAGCTTAGTTCAACCTAAGCTGCCAAAGAAACTGAAGAAGAGGAGGCAAACAATAACTGACGACGGTCCTGCTGGGTACGAGGAATACATCGATTACCTGTTCCCAGAAGAAAGTGAGACGACAAATCTCAAGATTTTGGAAGCTGCCTACCGGTGGAGGAAGAAGACAAGATTTTCTTCTTCTGATGAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
HAT Suf

Protein Analysis

653

Amino Acids

78.1

Weight (kDa)

6.72

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_Syf1_CNRKL1_N PF23233 74 - 218 1.1e-19 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
Suf PF05843 77 - 182 4.3e-06 Suppressor of forked protein (Suf)
HAT_PRP39_C PF23241 80 - 186 8.5e-13 PRP39 C-terminal HAT repeat
HAT_PRP39_N PF23240 85 - 178 1.3e-07 PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 87 - 149 1.5e-08 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N PF23240 164 - 300 2.6e-13 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 188 - 290 2.7e-15 PRP39 C-terminal HAT repeat
Suf PF05843 190 - 314 5.7e-06 Suppressor of forked protein (Suf)
HAT PF02184 202 - 230 9.4e-12 HAT (Half-A-TPR) repeat
HAT_Syf1_CNRKL1_C PF23231 238 - 314 2.3e-10 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 323 - 437 8.6e-11 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 324 - 435 2.8e-06 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 336 - 462 4.3e-06 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 438 - 532 2e-06 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N PF23240 457 - 557 3.4e-08 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 478 - 579 3.9e-06 PRP39 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 843, 1676
AasI GACNNNNNNGTC 1 cut(s) 437
Acc16I TGCGCA 1 cut(s) 1428
Acc36I ACCTGC 1 cut(s) 1037
AccB1I GGYRCC 1 cut(s) 1324
AccBSI CCGCTC 1 cut(s) 458
AciI CCGC 5 cut(s) 108, 380, 458, 947, 1117
AclWI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1454, 1562, 1761
AcsI RAATTY 4 cut(s) 152, 845, 1241, 1568
AcuI CTGAAG 2 cut(s) 1665, 1820
AdeI CACNNNGTG 1 cut(s) 366
AfaI GTAC 7 cut(s) 404, 473, 479, 642, 1309, 1352, 1844
AfiI CCNNNNNNNGG 2 cut(s) 659, 1920
AgeI ACCGGT 1 cut(s) 1917
AgsI TTSAA 6 cut(s) 101, 307, 1508, 1613, 1732, 1778
AjnI CCWGG 2 cut(s) 652, 1013
Alw21I GWGCWC 4 cut(s) 520, 880, 1198, 1663
Alw26I GTCTC 4 cut(s) 10, 212, 1615, 1877
Alw44I GTGCAC 1 cut(s) 1194
AlwI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1454, 1562, 1761
AlwNI CAGNNNCTG 1 cut(s) 1688
AoxI GGCC 2 cut(s) 129, 768
ApaLI GTGCAC 1 cut(s) 1194
ApeKI GCWGC 5 cut(s) 775, 1271, 1366, 1786, 1910
ApoI RAATTY 4 cut(s) 152, 845, 1241, 1568
ArsI GACNNNNNNTTYG 2 cut(s) 1001, 1033
AsiGI ACCGGT 1 cut(s) 1917
AspLEI GCGC 1 cut(s) 1429
AspS9I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1832
AsuC2I CCSGG 1 cut(s) 125
AsuHPI GGTGA 5 cut(s) 97, 703, 716, 1294, 1490
AsuII TTCGAA 1 cut(s) 801
AvaII GGWCC 5 cut(s) 232, 430, 460, 592, 1832
BaeGI GKGCMC 2 cut(s) 1198, 1501
BamHI GGATCC 1 cut(s) 669
BanI GGYRCC 1 cut(s) 1324
BanII GRGCYC 2 cut(s) 337, 1663
BarI GAAGNNNNNNTAC 2 cut(s) 386, 418
BauI CACGAG 1 cut(s) 1197
BbsI GAAGAC 1 cut(s) 1937
Bbv12I GWGCWC 4 cut(s) 520, 880, 1198, 1663
BbvI GCAGC 5 cut(s) 787, 1258, 1353, 1773, 1897
BccI CCATC 1 cut(s) 379
BceAI ACGGC 1 cut(s) 422
BcgI CGANNNNNNTGC 2 cut(s) 1817, 1851
BciT130I CCWGG 2 cut(s) 654, 1015
BcnI CCSGG 1 cut(s) 125
BcoDI GTCTC 4 cut(s) 10, 212, 1615, 1877
BfmI CTRYAG 2 cut(s) 1207, 1314
BfuAI ACCTGC 1 cut(s) 1037
BisI GCNGC 5 cut(s) 776, 1272, 1367, 1787, 1911
BlsI GCNGC 5 cut(s) 777, 1273, 1368, 1788, 1912
BmcAI AGTACT 1 cut(s) 1309
Bme1390I CCNGG 3 cut(s) 125, 654, 1015
Bme18I GGWCC 5 cut(s) 232, 430, 460, 592, 1832
BmgT120I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1832
BmiI GGNNCC 4 cut(s) 147, 356, 671, 1326
BmrFI CCNGG 3 cut(s) 125, 654, 1015
BmrI ACTGGG 1 cut(s) 510
BmsI GCATC 3 cut(s) 540, 934, 1638
BmuI ACTGGG 1 cut(s) 510
BoxI GACNNNNGTC 1 cut(s) 1830
BpiI GAAGAC 1 cut(s) 1937
BpmI CTGGAG 2 cut(s) 675, 1086
Bpu10I CCTNAGC 1 cut(s) 1782
Bpu14I TTCGAA 1 cut(s) 801
BpuEI CTTGAG 1 cut(s) 1880
BpuMI CCSGG 1 cut(s) 125
Bsa29I ATCGAT 1 cut(s) 1857
BsaBI GATNNNNATC 3 cut(s) 822, 1410, 1602
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 1 cut(s) 1590
BsaWI WCCGGW 4 cut(s) 594, 672, 1178, 1917
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 2 cut(s) 659, 1920
Bse118I RCCGGY 2 cut(s) 512, 1917
Bse1I ACTGG 2 cut(s) 505, 1305
Bse8I GATNNNNATC 3 cut(s) 822, 1410, 1602
BseBI CCWGG 2 cut(s) 654, 1015
BseCI ATCGAT 1 cut(s) 1857
BseDI CCNNGG 1 cut(s) 1590
BseGI GGATG 6 cut(s) 546, 555, 649, 949, 985, 1600
BseJI GATNNNNATC 3 cut(s) 822, 1410, 1602
BseLI CCNNNNNNNGG 2 cut(s) 659, 1920
BseMII CTCAG 2 cut(s) 180, 786
BseNI ACTGG 2 cut(s) 505, 1305
BseRI GAGGAG 3 cut(s) 779, 1181, 1822
BseSI GKGCMC 2 cut(s) 1198, 1501
BseXI GCAGC 5 cut(s) 787, 1258, 1353, 1773, 1897
BseYI CCCAGC 1 cut(s) 1838
BsgI GTGCAG 1 cut(s) 1065
BshFI GGCC 2 cut(s) 131, 770
BshNI GGYRCC 1 cut(s) 1324
BshTI ACCGGT 1 cut(s) 1917
BshVI ATCGAT 1 cut(s) 1857
BsiHKAI GWGCWC 4 cut(s) 520, 880, 1198, 1663
BsiSI CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1179, 1918
BslI CCNNNNNNNGG 2 cut(s) 659, 1920
BsmAI GTCTC 4 cut(s) 10, 212, 1615, 1877
BsmBI CGTCTC 2 cut(s) 212, 1877
BsmI GAATGC 1 cut(s) 1429
BsnI GGCC 2 cut(s) 131, 770
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 801
Bsp1286I GDGCHC 6 cut(s) 337, 520, 880, 1198, 1501, 1663
Bsp1407I TGTACA 1 cut(s) 640
BspACI CCGC 5 cut(s) 108, 380, 458, 947, 1117
BspANI GGCC 2 cut(s) 131, 770
BspCNI CTCAG 2 cut(s) 181, 787
BspDI ATCGAT 1 cut(s) 1857
BspLI GGNNCC 4 cut(s) 147, 356, 671, 1326
BspMI ACCTGC 1 cut(s) 1037
BspPI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1454, 1562, 1761
BspQI GCTCTTC 1 cut(s) 868
BspT104I TTCGAA 1 cut(s) 801
BspT107I GGYRCC 1 cut(s) 1324
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 1 cut(s) 458
BsrFI RCCGGY 2 cut(s) 512, 1917
BsrGI TGTACA 1 cut(s) 640
BsrI ACTGG 2 cut(s) 505, 1305
BssAI RCCGGY 2 cut(s) 512, 1917
BssECI CCNNGG 1 cut(s) 1590
BssSI CACGAG 1 cut(s) 1197
BssT1I CCWWGG 1 cut(s) 1590
Bst2BI CACGAG 1 cut(s) 1197
Bst2UI CCWGG 2 cut(s) 654, 1015
Bst4CI ACNGT 4 cut(s) 311, 434, 645, 1832
Bst6I CTCTTC 7 cut(s) 486, 798, 868, 1032, 1608, 1613, 1799
BstAUI TGTACA 1 cut(s) 640
BstBI TTCGAA 1 cut(s) 801
BstC8I GCNNGC 7 cut(s) 195, 246, 316, 333, 569, 615, 1638
BstDEI CTNAG 4 cut(s) 189, 795, 1771, 1782
BstF5I GGATG 6 cut(s) 546, 555, 649, 949, 985, 1600
BstHHI GCGC 1 cut(s) 1429
BstMAI GTCTC 4 cut(s) 10, 212, 1615, 1877
BstMWI GCNNNNNNNGC 2 cut(s) 145, 250
BstNI CCWGG 2 cut(s) 654, 1015
BstNSI RCATGY 1 cut(s) 1714
BstPAI GACNNNNGTC 1 cut(s) 1830
BstSCI CCNGG 3 cut(s) 123, 652, 1013
BstSFI CTRYAG 2 cut(s) 1207, 1314
BstSLI GKGCMC 2 cut(s) 1198, 1501
BstV1I GCAGC 5 cut(s) 787, 1258, 1353, 1773, 1897
BstV2I GAAGAC 1 cut(s) 1937
BstX2I RGATCY 2 cut(s) 669, 1753
BstYI RGATCY 2 cut(s) 669, 1753
Bsu15I ATCGAT 1 cut(s) 1857
BsuRI GGCC 2 cut(s) 131, 770
BsuTUI ATCGAT 1 cut(s) 1857
BtsCI GGATG 6 cut(s) 546, 555, 649, 949, 985, 1600
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 3 cut(s) 268, 650, 747
BveI ACCTGC 1 cut(s) 1037
Cac8I GCNNGC 7 cut(s) 195, 246, 316, 333, 569, 615, 1638
CaiI CAGNNNCTG 1 cut(s) 1688
CfoI GCGC 1 cut(s) 1429
Cfr10I RCCGGY 2 cut(s) 512, 1917
Cfr13I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1832
ClaI ATCGAT 1 cut(s) 1857
CseI GACGC 1 cut(s) 26
Csp6I GTAC 7 cut(s) 403, 472, 478, 641, 1308, 1351, 1843
CspAI ACCGGT 1 cut(s) 1917
CviAII CATG 3 cut(s) 285, 413, 1711
CviQI GTAC 7 cut(s) 403, 472, 478, 641, 1308, 1351, 1843
DdeI CTNAG 4 cut(s) 189, 795, 1771, 1782
DraIII CACNNNGTG 1 cut(s) 366
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
Eam1104I CTCTTC 7 cut(s) 486, 798, 868, 1032, 1608, 1613, 1799
EarI CTCTTC 7 cut(s) 486, 798, 868, 1032, 1608, 1613, 1799
Ecl136II GAGCTC 1 cut(s) 1661
Eco130I CCWWGG 1 cut(s) 1590
Eco24I GRGCYC 2 cut(s) 337, 1663
Eco31I GGTCTC 1 cut(s) 10
Eco32I GATATC 1 cut(s) 259
Eco47I GGWCC 5 cut(s) 232, 430, 460, 592, 1832
Eco53kI GAGCTC 1 cut(s) 1661
Eco57I CTGAAG 2 cut(s) 1665, 1820
EcoICRI GAGCTC 1 cut(s) 1661
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 2 cut(s) 652, 1013
EcoRV GATATC 1 cut(s) 259
EcoT14I CCWWGG 1 cut(s) 1590
EcoT22I ATGCAT 1 cut(s) 1631
EcoT38I GRGCYC 2 cut(s) 337, 1663
ErhI CCWWGG 1 cut(s) 1590
Esp3I CGTCTC 2 cut(s) 212, 1877
FaeI CATG 3 cut(s) 288, 416, 1714
FalI AAGNNNNNCTT 4 cut(s) 287, 319, 1927, 1959
FatI CATG 3 cut(s) 284, 412, 1710
FauNDI CATATG 1 cut(s) 486
Fnu4HI GCNGC 5 cut(s) 776, 1272, 1367, 1787, 1911
FokI GGATG 6 cut(s) 553, 562, 636, 956, 992, 1607
FriOI GRGCYC 2 cut(s) 337, 1663
Fsp4HI GCNGC 5 cut(s) 776, 1272, 1367, 1787, 1911
FspI TGCGCA 1 cut(s) 1428
GlaI GCGC 1 cut(s) 1428
GluI GCNGC 5 cut(s) 776, 1272, 1367, 1787, 1911
GsaI CCCAGC 1 cut(s) 1842
GsuI CTGGAG 2 cut(s) 675, 1086
HaeIII GGCC 2 cut(s) 131, 770
HapII CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1179, 1918
HgaI GACGC 1 cut(s) 26
HhaI GCGC 1 cut(s) 1429
Hin1II CATG 3 cut(s) 288, 416, 1714
Hin6I GCGC 1 cut(s) 1427
HinP1I GCGC 1 cut(s) 1427
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HindIII AAGCTT 1 cut(s) 1768
HinfI GANTC 8 cut(s) 748, 994, 1010, 1062, 1228, 1264, 1285, 1297
HpaII CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1179, 1918
HphI GGTGA 5 cut(s) 97, 703, 716, 1294, 1490
Hpy166II GTNNAC 3 cut(s) 52, 1075, 1196
Hpy188I TCNGA 7 cut(s) 10, 158, 212, 1067, 1227, 1395, 1951
Hpy188III TCNNGA 5 cut(s) 631, 1541, 1610, 1664, 1897
Hpy8I GTNNAC 3 cut(s) 52, 1075, 1196
Hpy99I CGWCG 1 cut(s) 1832
HpyAV CCTTC 5 cut(s) 40, 557, 926, 1638, 1690
HpyCH4III ACNGT 4 cut(s) 311, 434, 645, 1832
HpyCH4IV ACGT 2 cut(s) 217, 1192
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 250
HpyF3I CTNAG 4 cut(s) 189, 795, 1771, 1782
HpySE526I ACGT 2 cut(s) 217, 1192
Hsp92II CATG 3 cut(s) 288, 416, 1714
HspAI GCGC 1 cut(s) 1427
LguI GCTCTTC 1 cut(s) 868
LmnI GCTCC 6 cut(s) 145, 328, 556, 662, 1168, 1588
Lsp1109I GCAGC 5 cut(s) 787, 1258, 1353, 1773, 1897
LweI GCATC 3 cut(s) 540, 934, 1638
MaeII ACGT 2 cut(s) 217, 1192
MbiI CCGCTC 1 cut(s) 458
MflI RGATCY 2 cut(s) 669, 1753
MhlI GDGCHC 6 cut(s) 337, 520, 880, 1198, 1501, 1663
MluCI AATT 6 cut(s) 152, 224, 845, 1241, 1544, 1568
MlyI GAGTC 1 cut(s) 1004
MmeI TCCRAC 5 cut(s) 181, 408, 466, 640, 1373
Mph1103I ATGCAT 1 cut(s) 1631
MseI TTAA 4 cut(s) 75, 1149, 1221, 1344
MslI CAYNNNNRTG 2 cut(s) 485, 576
MspA1I CMGCKG 2 cut(s) 778, 1294
MspI CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1179, 1918
MspR9I CCNGG 3 cut(s) 125, 654, 1015
Mva1269I GAATGC 1 cut(s) 1429
MvaI CCWGG 2 cut(s) 654, 1015
MwoI GCNNNNNNNGC 2 cut(s) 145, 250
NciI CCSGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 486
NlaIII CATG 3 cut(s) 288, 416, 1714
NlaIV GGNNCC 4 cut(s) 147, 356, 671, 1326
NmeAIII GCCGAG 3 cut(s) 136, 796, 1300
NsbI TGCGCA 1 cut(s) 1428
NsiI ATGCAT 1 cut(s) 1631
NspI RCATGY 1 cut(s) 1714
NspV TTCGAA 1 cut(s) 801
PciSI GCTCTTC 1 cut(s) 868
PcsI WCGNNNNNNNCGW 1 cut(s) 798
PctI GAATGC 1 cut(s) 1429
PfeI GAWTC 7 cut(s) 748, 994, 1062, 1228, 1264, 1285, 1297
PflFI GACNNNGTC 1 cut(s) 236
PfoI TCCNGGA 2 cut(s) 123, 652
PinAI ACCGGT 1 cut(s) 1917
PkrI GCNGC 5 cut(s) 777, 1273, 1368, 1788, 1912
PleI GAGTC 1 cut(s) 1004
PpsI GAGTC 1 cut(s) 1004
PshAI GACNNNNGTC 1 cut(s) 1830
PsiI TTATAA 2 cut(s) 843, 1676
Psp124BI GAGCTC 1 cut(s) 1663
Psp6I CCWGG 2 cut(s) 652, 1013
PspFI CCCAGC 1 cut(s) 1838
PspGI CCWGG 2 cut(s) 652, 1013
PspN4I GGNNCC 4 cut(s) 147, 356, 671, 1326
PspPI GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1832
PsrI GAACNNNNNNTAC 2 cut(s) 1758, 1790
PstNI CAGNNNCTG 1 cut(s) 1688
PsuI RGATCY 2 cut(s) 669, 1753
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 2 cut(s) 778, 1294
RsaI GTAC 7 cut(s) 404, 473, 479, 642, 1309, 1352, 1844
RsaNI GTAC 7 cut(s) 403, 472, 478, 641, 1308, 1351, 1843
RseI CAYNNNNRTG 2 cut(s) 485, 576
SacI GAGCTC 1 cut(s) 1663
SapI GCTCTTC 1 cut(s) 868
SaqAI TTAA 4 cut(s) 75, 1149, 1221, 1344
SatI GCNGC 5 cut(s) 776, 1272, 1367, 1787, 1911
Sau96I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1832
ScaI AGTACT 1 cut(s) 1309
SchI GAGTC 1 cut(s) 1004
ScrFI CCNGG 3 cut(s) 125, 654, 1015
SduI GDGCHC 6 cut(s) 337, 520, 880, 1198, 1501, 1663
SfaNI GCATC 3 cut(s) 540, 934, 1638
SfcI CTRYAG 2 cut(s) 1207, 1314
SfuI TTCGAA 1 cut(s) 801
SinI GGWCC 5 cut(s) 232, 430, 460, 592, 1832
SmiMI CAYNNNNRTG 2 cut(s) 485, 576
SmlI CTYRAG 1 cut(s) 1895
SmoI CTYRAG 1 cut(s) 1895
Sse9I AATT 6 cut(s) 152, 224, 845, 1241, 1544, 1568
SsiI CCGC 5 cut(s) 108, 380, 458, 947, 1117
SstI GAGCTC 1 cut(s) 1663
StyD4I CCNGG 3 cut(s) 123, 652, 1013
StyI CCWWGG 1 cut(s) 1590
TaaI ACNGT 4 cut(s) 311, 434, 645, 1832
TaiI ACGT 2 cut(s) 220, 1195
TaqII GACCGA 1 cut(s) 79
TasI AATT 6 cut(s) 152, 224, 845, 1241, 1544, 1568
TatI WGTACW 5 cut(s) 402, 477, 640, 1307, 1350
TfiI GAWTC 7 cut(s) 748, 994, 1062, 1228, 1264, 1285, 1297
Tru1I TTAA 4 cut(s) 75, 1149, 1221, 1344
Tru9I TTAA 4 cut(s) 75, 1149, 1221, 1344
TscAI CASTG 3 cut(s) 268, 650, 747
TseI GCWGC 5 cut(s) 775, 1271, 1366, 1786, 1910
TspDTI ATGAA 2 cut(s) 407, 473
TspRI CASTG 3 cut(s) 268, 650, 747
Tth111I GACNNNGTC 1 cut(s) 236
VneI GTGCAC 1 cut(s) 1194
VpaK11BI GGWCC 5 cut(s) 232, 430, 460, 592, 1832
XapI RAATTY 4 cut(s) 152, 845, 1241, 1568
XceI RCATGY 1 cut(s) 1714
ZrmI AGTACT 1 cut(s) 1309
Zsp2I ATGCAT 1 cut(s) 1631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.