Rw5G004150

Crooked neck-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0002910
Physical Location & Seq
Reverse (-)
4189097 .. 4191064
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004150.1

Sequence Viewer

Length: 1968 bp
ATGGTCTCTGACAAAGACGCAGACGACCTAACGCGAAAGAATAAGAAGGTCAATCTACCAAGACCGAGTAGGGTTAAGAACAAAACACCAGCCCCTATTCAAATCACCGCCGAGCAAATCATCCGGGAGGCCCGTGAGCAACAGGAGCCAGAATTTCGACCTCCCAAACAGAAAATCACAGACCCAACTGAGCTTGCAGATGATCGTCTCCGAGAACGCAAGCAATTCGAGGACCAAGTCCGGCGAGCAAGGCAGGATAACAGTGTGTGGATCAAGTATGCAGCATGGGAGGAAAAGGAGGACTTGAACCGTGCAAGCTCTGTTTGGGAGCGAGCCCTCAGAGTCGATTATAGGAACCACACGCTGTGGATCAAGTATGCGGAGATGGAGATGAAGAACGAGTACATCGACCATGCTAGGAATGTGTTGGACCGTGCCGTCCAACTCTTGCCTAGAGCGGACCAGCTTTGGTACAAGTACATTCATATGGAAGAGATGACTGGGAATGTGGCCGGTGCTCGACAGATTTTTGAGAGGTGGATGACTTGGATGCCGGAGCAGGAAGGCTGGCTCTCGTATGTCAAGTTTGAGGTCCGGTATAACGAAGTTGAGCGTGCTAGAGCGATTTTTGAGAGGTTTGTACAGTGTCATCCTGGAGTTGGAGCTTGGATCCGGTATGCCAAGTTTGAGGTGAAGAATGGTGGTGATGTTGTAAGGGCTAGGAAAGTGTATGAGAGGGCAGTGGAGATTCTAGCTGATGATGAGGAGGCCGAGCAGCTGTTTTTGGCTTTCGCTGAGTTCGAAGAGAAGTGCAAAGATATTGATCGAGCAAGGTGTGTTTATAAATTTGCATTGGATCAAATAACGAAAGGAAGAGCACAGGATTTGTATAAGAAGTTTGTATGTTTTGAGAAGCGATATGGGGATAGAGAAGGGATTGAGGATGCGGTTGTGGGAACAAGGAGGTTTGAGTATGAGGATGAGATTAGGAAGAATCCTCTAAACTACGACTCCTGGTTTGATTACATAAGGCTGGAAGAGAAGGAAAGAATCCGAGAGATTTACGAGAGAGCTGTTGCTAATGTTCCTCCAGCTAATGAGAAGCGGTATTGGAAGCGATATATTTATCTGTGGATTAATTATGCACTATATGAGGAGCTTGATACCGGAGATGTGGAACGTGCACGAAAGGTCTATAGAGAGTGCCTTAATCTGATTCCTCATAAGAAATTCTCATTTGCGAAAATATGGATTCTAGCTGCCGAGTTTGAGATTCGACAGCTGAATCTCACCAGCGCACGCCACATTCTTGGTACTGCTATAGGCAAGGCACCTAAAGAGAAGATATTTAAGAAGTACATTGAGATTGAGCTGCAACTTGCAAAGATAGATCGTTGTCGGAAGTTGTATGATAAGTATCTGCTTTGGAATGCGCAGAGTTGTTATGCTTGGATCAAGTATGCAGAGTTTGAGAAATCTTTAGGTGAAACAGAACGAGCAAGGGCACTTTTTGAACTCGCAATCAGCCAACTAGAACTTGACAATCCTGAATTGGTGTGGATCAGTTATGCAAAATTTGAGGCAGAAGCTCCTGCCAAGGATGATGATGATCTTCTTGAAGAGAAGAGACAATGCATCAAGCGTGCTAGAGGGGTTTTTGAGAGAGCTCTTGACTATTTTATAACTTCAGCACCTGATAAGAAGGAAGAAAGAAGCATGTTGCTAGAAGAATGGTTGAATATGGAGGCTAGCTTTGGGGATCTCGGTGGTGTAAGCTTAGTTCAACCTAAGCTGCCAAAGAAACTGAAGAAGAGGAGGCAAACAATAACTGACGACGGTCCTGCTGGGTACGAGGAATACATCGATTACCAGTTCCCAGAAGAAAGTGAGACGACAAATCTCAAGATTTTGGAAGCTGCCTACCGGTGGAGGAAGAAGACAAAATTTTCTGCTTCTGATGAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
HAT Suf

Protein Analysis

655

Amino Acids

78.22

Weight (kDa)

6.49

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_Syf1_CNRKL1_N PF23233 74 - 218 9e-18 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 75 - 163 3.7e-06 PRP39 N-terminal HAT repeat
Suf PF05843 78 - 314 6.6e-11 Suppressor of forked protein (Suf)
HAT_PRP39_C PF23241 84 - 186 7.6e-12 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 86 - 149 1.5e-08 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 138 - 235 1.6e-06 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N PF23240 164 - 300 6.4e-13 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 188 - 289 2.3e-14 PRP39 C-terminal HAT repeat
HAT PF02184 202 - 230 9.4e-12 HAT (Half-A-TPR) repeat
HAT_Syf1_CNRKL1_C PF23231 238 - 314 1.1e-10 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 323 - 475 5.1e-12 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 348 - 471 3.4e-08 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 443 - 559 3e-06 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N PF23240 459 - 559 4.5e-08 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 480 - 582 5.4e-06 PRP39 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 843, 1682
AasI GACNNNNNNGTC 1 cut(s) 437
Acc16I TGCGCA 1 cut(s) 1434
AccB1I GGYRCC 1 cut(s) 1330
AccBSI CCGCTC 1 cut(s) 458
AccII CGCG 1 cut(s) 34
AciI CCGC 5 cut(s) 108, 380, 458, 947, 1105
AclWI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1460, 1568, 1767
AcoI YGGCCR 1 cut(s) 510
AcsI RAATTY 5 cut(s) 152, 845, 1229, 1574, 1943
AcuI CTGAAG 2 cut(s) 1671, 1826
AdeI CACNNNGTG 1 cut(s) 366
AfaI GTAC 7 cut(s) 404, 473, 479, 642, 1315, 1358, 1850
AfiI CCNNNNNNNGG 2 cut(s) 659, 1926
AgeI ACCGGT 1 cut(s) 1923
AgsI TTSAA 6 cut(s) 101, 307, 1514, 1619, 1738, 1784
AjnI CCWGG 2 cut(s) 652, 1013
Alw21I GWGCWC 4 cut(s) 520, 880, 1186, 1669
Alw26I GTCTC 4 cut(s) 10, 212, 1621, 1883
Alw44I GTGCAC 1 cut(s) 1182
AlwI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1460, 1568, 1767
AlwNI CAGNNNCTG 1 cut(s) 1694
AoxI GGCC 3 cut(s) 129, 510, 768
ApaLI GTGCAC 1 cut(s) 1182
ApeKI GCWGC 6 cut(s) 281, 775, 1259, 1372, 1792, 1916
ApoI RAATTY 5 cut(s) 152, 845, 1229, 1574, 1943
ArsI GACNNNNNNTTYG 2 cut(s) 1001, 1033
AseI ATTAAT 1 cut(s) 1137
AsiGI ACCGGT 1 cut(s) 1923
AspLEI GCGC 2 cut(s) 1298, 1435
AspS9I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1838
AsuC2I CCSGG 1 cut(s) 125
AsuHPI GGTGA 5 cut(s) 97, 703, 716, 1282, 1496
AsuII TTCGAA 1 cut(s) 801
AsuNHI GCTAGC 1 cut(s) 1748
AvaII GGWCC 5 cut(s) 232, 430, 460, 592, 1838
BaeGI GKGCMC 2 cut(s) 1186, 1507
BamHI GGATCC 1 cut(s) 669
BanI GGYRCC 1 cut(s) 1330
BanII GRGCYC 2 cut(s) 337, 1669
BarI GAAGNNNNNNTAC 2 cut(s) 386, 418
BbsI GAAGAC 1 cut(s) 1943
Bbv12I GWGCWC 4 cut(s) 520, 880, 1186, 1669
BbvI GCAGC 6 cut(s) 293, 787, 1246, 1359, 1779, 1903
BccI CCATC 1 cut(s) 379
BceAI ACGGC 1 cut(s) 422
BcgI CGANNNNNNTGC 4 cut(s) 208, 242, 1823, 1857
BciT130I CCWGG 2 cut(s) 654, 1015
BcnI CCSGG 1 cut(s) 125
BcoDI GTCTC 4 cut(s) 10, 212, 1621, 1883
BfmI CTRYAG 2 cut(s) 1195, 1320
BisI GCNGC 6 cut(s) 282, 776, 1260, 1373, 1793, 1917
BlsI GCNGC 6 cut(s) 283, 777, 1261, 1374, 1794, 1918
Bme1390I CCNGG 3 cut(s) 125, 654, 1015
Bme18I GGWCC 5 cut(s) 232, 430, 460, 592, 1838
BmgT120I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1838
BmiI GGNNCC 4 cut(s) 147, 356, 671, 1332
BmrFI CCNGG 3 cut(s) 125, 654, 1015
BmrI ACTGGG 1 cut(s) 510
BmsI GCATC 3 cut(s) 540, 934, 1644
BmtI GCTAGC 1 cut(s) 1752
BmuI ACTGGG 1 cut(s) 510
BoxI GACNNNNGTC 1 cut(s) 1836
BpiI GAAGAC 1 cut(s) 1943
BpmI CTGGAG 2 cut(s) 675, 1074
Bpu10I CCTNAGC 1 cut(s) 1788
Bpu14I TTCGAA 1 cut(s) 801
BpuEI CTTGAG 1 cut(s) 1886
BpuMI CCSGG 1 cut(s) 125
Bsa29I ATCGAT 1 cut(s) 1863
BsaBI GATNNNNATC 3 cut(s) 822, 1416, 1608
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 1 cut(s) 1596
BsaWI WCCGGW 4 cut(s) 594, 672, 1166, 1923
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 2 cut(s) 659, 1926
Bse118I RCCGGY 2 cut(s) 512, 1923
Bse1I ACTGG 2 cut(s) 505, 1870
Bse8I GATNNNNATC 3 cut(s) 822, 1416, 1608
BseBI CCWGG 2 cut(s) 654, 1015
BseCI ATCGAT 1 cut(s) 1863
BseDI CCNNGG 1 cut(s) 1596
BseGI GGATG 7 cut(s) 120, 546, 555, 649, 949, 985, 1606
BseJI GATNNNNATC 3 cut(s) 822, 1416, 1608
BseLI CCNNNNNNNGG 2 cut(s) 659, 1926
BseMII CTCAG 3 cut(s) 180, 352, 786
BseNI ACTGG 2 cut(s) 505, 1870
BseRI GAGGAG 3 cut(s) 779, 1169, 1828
BseSI GKGCMC 2 cut(s) 1186, 1507
BseXI GCAGC 6 cut(s) 293, 787, 1246, 1359, 1779, 1903
BseYI CCCAGC 1 cut(s) 1844
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 3 cut(s) 131, 512, 770
BshNI GGYRCC 1 cut(s) 1330
BshTI ACCGGT 1 cut(s) 1923
BshVI ATCGAT 1 cut(s) 1863
BsiHKAI GWGCWC 4 cut(s) 520, 880, 1186, 1669
BsiSI CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1167, 1924
BslI CCNNNNNNNGG 2 cut(s) 659, 1926
BsmAI GTCTC 4 cut(s) 10, 212, 1621, 1883
BsmBI CGTCTC 2 cut(s) 212, 1883
BsmI GAATGC 1 cut(s) 1435
BsnI GGCC 3 cut(s) 131, 512, 770
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 801
Bsp1286I GDGCHC 6 cut(s) 337, 520, 880, 1186, 1507, 1669
Bsp1407I TGTACA 1 cut(s) 640
BspACI CCGC 5 cut(s) 108, 380, 458, 947, 1105
BspANI GGCC 3 cut(s) 131, 512, 770
BspCNI CTCAG 3 cut(s) 181, 351, 787
BspDI ATCGAT 1 cut(s) 1863
BspFNI CGCG 1 cut(s) 34
BspLI GGNNCC 4 cut(s) 147, 356, 671, 1332
BspOI GCTAGC 1 cut(s) 1752
BspPI GGATC 8 cut(s) 278, 377, 664, 677, 864, 1460, 1568, 1767
BspQI GCTCTTC 1 cut(s) 868
BspT104I TTCGAA 1 cut(s) 801
BspT107I GGYRCC 1 cut(s) 1330
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 1 cut(s) 458
BsrFI RCCGGY 2 cut(s) 512, 1923
BsrGI TGTACA 1 cut(s) 640
BsrI ACTGG 2 cut(s) 505, 1870
BssAI RCCGGY 2 cut(s) 512, 1923
BssECI CCNNGG 1 cut(s) 1596
BssT1I CCWWGG 1 cut(s) 1596
Bst2UI CCWGG 2 cut(s) 654, 1015
Bst4CI ACNGT 5 cut(s) 263, 311, 434, 645, 1838
Bst6I CTCTTC 7 cut(s) 486, 798, 868, 1032, 1614, 1619, 1805
BstAUI TGTACA 1 cut(s) 640
BstBI TTCGAA 1 cut(s) 801
BstDEI CTNAG 5 cut(s) 189, 338, 795, 1777, 1788
BstF5I GGATG 7 cut(s) 120, 546, 555, 649, 949, 985, 1606
BstFNI CGCG 1 cut(s) 34
BstHHI GCGC 2 cut(s) 1298, 1435
BstMAI GTCTC 4 cut(s) 10, 212, 1621, 1883
BstMWI GCNNNNNNNGC 2 cut(s) 145, 250
BstNI CCWGG 2 cut(s) 654, 1015
BstNSI RCATGY 1 cut(s) 1720
BstPAI GACNNNNGTC 1 cut(s) 1836
BstSCI CCNGG 3 cut(s) 123, 652, 1013
BstSFI CTRYAG 2 cut(s) 1195, 1320
BstSLI GKGCMC 2 cut(s) 1186, 1507
BstUI CGCG 1 cut(s) 34
BstV1I GCAGC 6 cut(s) 293, 787, 1246, 1359, 1779, 1903
BstV2I GAAGAC 1 cut(s) 1943
BstX2I RGATCY 2 cut(s) 669, 1759
BstXI CCANNNNNNTGG 1 cut(s) 1310
BstYI RGATCY 2 cut(s) 669, 1759
Bsu15I ATCGAT 1 cut(s) 1863
BsuRI GGCC 3 cut(s) 131, 512, 770
BsuTUI ATCGAT 1 cut(s) 1863
BtsCI GGATG 7 cut(s) 120, 546, 555, 649, 949, 985, 1606
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 3 cut(s) 268, 650, 747
CaiI CAGNNNCTG 1 cut(s) 1694
CfoI GCGC 2 cut(s) 1298, 1435
Cfr10I RCCGGY 2 cut(s) 512, 1923
Cfr13I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1838
ClaI ATCGAT 1 cut(s) 1863
CseI GACGC 1 cut(s) 26
Csp6I GTAC 7 cut(s) 403, 472, 478, 641, 1314, 1357, 1849
CspAI ACCGGT 1 cut(s) 1923
CviAII CATG 3 cut(s) 285, 413, 1717
CviQI GTAC 7 cut(s) 403, 472, 478, 641, 1314, 1357, 1849
DdeI CTNAG 5 cut(s) 189, 338, 795, 1777, 1788
DraIII CACNNNGTG 1 cut(s) 366
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
EaeI YGGCCR 1 cut(s) 510
Eam1104I CTCTTC 7 cut(s) 486, 798, 868, 1032, 1614, 1619, 1805
EarI CTCTTC 7 cut(s) 486, 798, 868, 1032, 1614, 1619, 1805
Ecl136II GAGCTC 1 cut(s) 1667
Eco130I CCWWGG 1 cut(s) 1596
Eco24I GRGCYC 2 cut(s) 337, 1669
Eco31I GGTCTC 1 cut(s) 10
Eco47I GGWCC 5 cut(s) 232, 430, 460, 592, 1838
Eco53kI GAGCTC 1 cut(s) 1667
Eco57I CTGAAG 2 cut(s) 1671, 1826
EcoICRI GAGCTC 1 cut(s) 1667
EcoRII CCWGG 2 cut(s) 652, 1013
EcoT14I CCWWGG 1 cut(s) 1596
EcoT22I ATGCAT 1 cut(s) 1637
EcoT38I GRGCYC 2 cut(s) 337, 1669
ErhI CCWWGG 1 cut(s) 1596
Esp3I CGTCTC 2 cut(s) 212, 1883
FaeI CATG 3 cut(s) 288, 416, 1720
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FatI CATG 3 cut(s) 284, 412, 1716
FauNDI CATATG 1 cut(s) 486
Fnu4HI GCNGC 6 cut(s) 282, 776, 1260, 1373, 1793, 1917
FokI GGATG 7 cut(s) 107, 553, 562, 636, 956, 992, 1613
FriOI GRGCYC 2 cut(s) 337, 1669
Fsp4HI GCNGC 6 cut(s) 282, 776, 1260, 1373, 1793, 1917
FspI TGCGCA 1 cut(s) 1434
GlaI GCGC 2 cut(s) 1297, 1434
GluI GCNGC 6 cut(s) 282, 776, 1260, 1373, 1793, 1917
GsaI CCCAGC 1 cut(s) 1848
GsuI CTGGAG 2 cut(s) 675, 1074
HaeIII GGCC 3 cut(s) 131, 512, 770
HapII CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1167, 1924
HgaI GACGC 1 cut(s) 26
HhaI GCGC 2 cut(s) 1298, 1435
Hin1II CATG 3 cut(s) 288, 416, 1720
Hin6I GCGC 2 cut(s) 1296, 1433
HinP1I GCGC 2 cut(s) 1296, 1433
HindIII AAGCTT 1 cut(s) 1774
HinfI GANTC 9 cut(s) 342, 748, 994, 1010, 1050, 1216, 1252, 1273, 1285
HpaII CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1167, 1924
HphI GGTGA 5 cut(s) 97, 703, 716, 1282, 1496
Hpy166II GTNNAC 1 cut(s) 1184
Hpy188I TCNGA 7 cut(s) 10, 212, 341, 1055, 1215, 1401, 1957
Hpy188III TCNNGA 4 cut(s) 1547, 1616, 1670, 1903
Hpy8I GTNNAC 1 cut(s) 1184
Hpy99I CGWCG 1 cut(s) 1838
HpyAV CCTTC 5 cut(s) 40, 557, 926, 1036, 1696
HpyCH4III ACNGT 5 cut(s) 263, 311, 434, 645, 1838
HpyCH4IV ACGT 1 cut(s) 1180
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 250
HpyF3I CTNAG 5 cut(s) 189, 338, 795, 1777, 1788
HpySE526I ACGT 1 cut(s) 1180
Hsp92II CATG 3 cut(s) 288, 416, 1720
HspAI GCGC 2 cut(s) 1296, 1433
LguI GCTCTTC 1 cut(s) 868
LmnI GCTCC 6 cut(s) 145, 328, 556, 662, 1156, 1594
Lsp1109I GCAGC 6 cut(s) 293, 787, 1246, 1359, 1779, 1903
LweI GCATC 3 cut(s) 540, 934, 1644
MaeII ACGT 1 cut(s) 1180
MbiI CCGCTC 1 cut(s) 458
MflI RGATCY 2 cut(s) 669, 1759
MhlI GDGCHC 6 cut(s) 337, 520, 880, 1186, 1507, 1669
MluCI AATT 8 cut(s) 152, 224, 845, 1138, 1229, 1550, 1574, 1943
MlyI GAGTC 2 cut(s) 351, 1004
MmeI TCCRAC 4 cut(s) 408, 466, 640, 1379
Mph1103I ATGCAT 1 cut(s) 1637
MseI TTAA 4 cut(s) 75, 1137, 1209, 1350
MslI CAYNNNNRTG 1 cut(s) 485
MspA1I CMGCKG 2 cut(s) 778, 1282
MspI CCGG 8 cut(s) 124, 241, 513, 554, 595, 673, 1167, 1924
MspR9I CCNGG 3 cut(s) 125, 654, 1015
Mva1269I GAATGC 1 cut(s) 1435
MvaI CCWGG 2 cut(s) 654, 1015
MvnI CGCG 1 cut(s) 34
MwoI GCNNNNNNNGC 2 cut(s) 145, 250
NciI CCSGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 486
NheI GCTAGC 1 cut(s) 1748
NlaIII CATG 3 cut(s) 288, 416, 1720
NlaIV GGNNCC 4 cut(s) 147, 356, 671, 1332
NmeAIII GCCGAG 3 cut(s) 136, 796, 1288
NsbI TGCGCA 1 cut(s) 1434
NsiI ATGCAT 1 cut(s) 1637
NspI RCATGY 1 cut(s) 1720
NspV TTCGAA 1 cut(s) 801
PciSI GCTCTTC 1 cut(s) 868
PcsI WCGNNNNNNNCGW 2 cut(s) 405, 798
PctI GAATGC 1 cut(s) 1435
PfeI GAWTC 7 cut(s) 748, 994, 1050, 1216, 1252, 1273, 1285
PflFI GACNNNGTC 1 cut(s) 236
PfoI TCCNGGA 2 cut(s) 123, 652
PinAI ACCGGT 1 cut(s) 1923
PkrI GCNGC 6 cut(s) 283, 777, 1261, 1374, 1794, 1918
PleI GAGTC 2 cut(s) 350, 1004
PpsI GAGTC 2 cut(s) 350, 1004
PshAI GACNNNNGTC 1 cut(s) 1836
PshBI ATTAAT 1 cut(s) 1137
PsiI TTATAA 2 cut(s) 843, 1682
Psp124BI GAGCTC 1 cut(s) 1669
Psp6I CCWGG 2 cut(s) 652, 1013
PspFI CCCAGC 1 cut(s) 1844
PspGI CCWGG 2 cut(s) 652, 1013
PspN4I GGNNCC 4 cut(s) 147, 356, 671, 1332
PspPI GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1838
PsrI GAACNNNNNNTAC 2 cut(s) 1764, 1796
PstNI CAGNNNCTG 1 cut(s) 1694
PsuI RGATCY 2 cut(s) 669, 1759
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 2 cut(s) 778, 1282
RsaI GTAC 7 cut(s) 404, 473, 479, 642, 1315, 1358, 1850
RsaNI GTAC 7 cut(s) 403, 472, 478, 641, 1314, 1357, 1849
RseI CAYNNNNRTG 1 cut(s) 485
SacI GAGCTC 1 cut(s) 1669
SapI GCTCTTC 1 cut(s) 868
SaqAI TTAA 4 cut(s) 75, 1137, 1209, 1350
SatI GCNGC 6 cut(s) 282, 776, 1260, 1373, 1793, 1917
Sau96I GGNCC 6 cut(s) 130, 232, 430, 460, 592, 1838
SchI GAGTC 2 cut(s) 351, 1004
ScrFI CCNGG 3 cut(s) 125, 654, 1015
SduI GDGCHC 6 cut(s) 337, 520, 880, 1186, 1507, 1669
SfaNI GCATC 3 cut(s) 540, 934, 1644
SfcI CTRYAG 2 cut(s) 1195, 1320
SfuI TTCGAA 1 cut(s) 801
SinI GGWCC 5 cut(s) 232, 430, 460, 592, 1838
SmiMI CAYNNNNRTG 1 cut(s) 485
SmlI CTYRAG 1 cut(s) 1901
SmoI CTYRAG 1 cut(s) 1901
Sse9I AATT 8 cut(s) 152, 224, 845, 1138, 1229, 1550, 1574, 1943
SsiI CCGC 5 cut(s) 108, 380, 458, 947, 1105
SstI GAGCTC 1 cut(s) 1669
StyD4I CCNGG 3 cut(s) 123, 652, 1013
StyI CCWWGG 1 cut(s) 1596
TaaI ACNGT 5 cut(s) 263, 311, 434, 645, 1838
TaiI ACGT 1 cut(s) 1183
TaqI TCGA 9 cut(s) 157, 228, 345, 408, 520, 801, 826, 1276, 1863
TaqII GACCGA 1 cut(s) 79
TasI AATT 8 cut(s) 152, 224, 845, 1138, 1229, 1550, 1574, 1943
TatI WGTACW 4 cut(s) 402, 477, 640, 1356
TfiI GAWTC 7 cut(s) 748, 994, 1050, 1216, 1252, 1273, 1285
Tru1I TTAA 4 cut(s) 75, 1137, 1209, 1350
Tru9I TTAA 4 cut(s) 75, 1137, 1209, 1350
TscAI CASTG 3 cut(s) 268, 650, 747
TseI GCWGC 6 cut(s) 281, 775, 1259, 1372, 1792, 1916
TspDTI ATGAA 2 cut(s) 407, 473
TspRI CASTG 3 cut(s) 268, 650, 747
Tth111I GACNNNGTC 1 cut(s) 236
VneI GTGCAC 1 cut(s) 1182
VpaK11BI GGWCC 5 cut(s) 232, 430, 460, 592, 1838
VspI ATTAAT 1 cut(s) 1137
XapI RAATTY 5 cut(s) 152, 845, 1229, 1574, 1943
XceI RCATGY 1 cut(s) 1720
Zsp2I ATGCAT 1 cut(s) 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.