Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002910

Physical Location & Seq

Genomic Coordinates Forward (+)

18651265 .. 18654075

Gene Structure 2811 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G45990.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGACCGGGAAAGATGCTGAAGTAAAGCTTCCACGGACGACGCGGGTCAAGAACAAGACCCCGGCACCTGTGCAAATCACTGCAGAGCAAATTCTAAGAGAAGCTCGAGAGAGGCAAGAAGCTGAGATCCGTCCACCTAAGCAGAAAATCACTGATTCTACTGAGCTTTCCGATTACAGACTCCGACGTCGGAAAGAGTTTGAGGACCAGATCCGTCGAGCGAGATGGAACATCCAAGTTTGGGTCAAATATGCGAAGTGGGAAGAGTCGCAAATGGACTACGCACGTGCTCGAAGCGTGTGGGAACGAGCTTTAGAAGGAGAGTACAGGAACCATACGCTTTGGGTCAAGTACGCAGAGTTTGAGATGAAGAACAAGTTTGTCAACAATGCAAGGAACGTTTGGGATCGTTCTGTTACGCTTCTCCCTCGAGTTGATCAGCTTTGGGAGAAGTATATTTACATGGAAGAGAAGCTTGGGAATGTTACTGGAGCTAGACAGATCTTCGAGCGGTGGATGAACTGGTCACCAGATCAAAAAGCTTGGCTCTGTTTTATTAAGTTTGAACTTAGGTATAACGAAATCGAACGTGCGAGATCGATATACGAGAGATTTGTTCTTTGTCATCCGAAAGTATCTGCTTTTATTCGATATGCAAAGTTTGAGATGAAGCGTGGTGGTCAAGTTAAGCTAGCTAGGGAGGTTTACGAACGAGCAGTGGACAAACTTGCAAACGATGAAGAAGCTGAGATTCTCTTTGTATCGTTTGCTGAATTCGAAGAACGATGCAAGGAAGTAGAGCGGGCTAGGTTTATCTACAAGTTTGCTCTTGATCATATTCGTAAAGGAAGAGCTGAGGAGTTGTACAAGAAGTTTGTGGCGTTTGAGAAACAGTATGGAGATAAGGAAGGTATTGAGGATGCTATTGTTGGGAAGAAGAGGTTTGAGTATGAAGATGAAGTGAGTAAAAACCCTTTGAACTATGACTCATGGTTCGATTATGTTAGGCTGGAAGAGAGTGTTGGGAACAAAGATAGGATAAGAGAAATCTATGAGAGGGCTATTGCTAATGTTCCACCTGCCCAAGAGAAACGATTCTGGCAAAGATACATTTATCTTTGGATTAATTATGCTTTGTATGAAGAGATTGAAACTAAAGATGTGGAACGTACACGAGATGTTTACAGAGAATGTCTCAAGCTTATCCCACACACCAAATTTTCTTTTGCCAAAATATGGTTGCTCGCTGCAGAATATGAAATCAGGCAATTGAATCTCACCGGTGCACGGCAGATATTAGGTAATGCGATTGGGAAAGCTCCAAAAGTTAAGATATTCAAGAAATACATTGAGATGGAACTCAAGTTGGTAAACATCGATAGATGTAGAAAATTATACGAGCGGTTTCTTGAATGGTCTCCTGAGAATTGCTATGCTTGGAGAAACTATGCTGAGTTTGAGATTTCGCTTGCTGAAACAGAACGTGCTAGAGCTATCTTTGAACTTGCAATATCTCAGCCTGCTCTAGACATGCCTGAGCTGCTTTGGAAGACGTACATTGATTTTGAGATATCAGAAGGGGAATTCGAGAAGACACGGGCTTTATATGAGCGACTCTTGGACCGTACAAAGCATTGCAAGGTGTGGATTAGCTTTGCAAAGTTCGAAGCTTCTGCTTCAGAACACAAAGAAGACGGCATCAAAAGCGCCAGAGTGATCTTCGACAGAGCCAATACATACTACAAAGACACCACACCGGAGCTTGAAGAAGAGCGTGCTACGCTTTTGGAGGATTGGCTTAACATGGAGACAGGCTTTGGTGAGCTCGGGGATGTTAGTGTCGTTCAATCAAAGCTCCCGAAGAAGCTCAAGAAGAGAAAGATGACCAGTAGAGAAGACGGCTCTACAGAGTATGAAGAATACTTTGATTATCTGTTCCCTGAAGAATCAGGGACGACGAATCTCAAGATTCTTGAAGCTGCTTATAAATGGAAGAAGCTTAAAGGTGAGGAATGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0071007 GO:0071010 GO:0071011 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

HAT TPR_8

Protein Analysis

673

Amino Acids

80.89

Weight (kDa)

8.27

Isoelectric Point (pI)

47.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_C	PF23241	73 - 188	1.1e-12	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	75 - 317	1.3e-20	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	76 - 221	3.2e-19	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
Suf	PF05843	77 - 316	2.1e-09	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	88 - 185	3.2e-08	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	190 - 291	3.6e-10	PRP39 C-terminal HAT repeat
HAT_PRP39_N	PF23240	191 - 302	2.3e-08	PRP39 N-terminal HAT repeat
HAT	PF02184	204 - 232	7.2e-13	HAT (Half-A-TPR) repeat
HAT_PRP39_N	PF23240	322 - 446	6.2e-07	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	325 - 485	7.4e-14	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	338 - 449	1.8e-08	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	394 - 543	3.4e-12	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	452 - 572	2e-08	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N	PF23240	455 - 551	3e-13	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	526 - 613	8e-11	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13210 AT5G41770 AT5G45990 AT5G45990
fragaria_vesca	FvH4_3g03250 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070 FvH4_5g04070
malus_domestica	MD06G1102000.v1.1 MD14G1121300.v1.1
prunus_persica	Prupe.5G115100_v2.0.a1
pyrus_communis	pycom06g09690
rosa_chinensis	RchiOBHm_Chr5g0005001 RchiOBHm_Chr7g0195451
rosa_laevigata	RLG00000004120 RLG00000031279
rosa_multiflora	Rmu_co8413909.1_g000001 Rmu_sc0010714.1_g000003 Rmu_sc0016543.1_g000004 Rmu_sc0018163.1_g000001 Rmu_sc0020160.1_g000003
rosa_roxburghii	Rroxscaffold_3G00260470
rosa_rugosa	Rorug04G0415100 Rorug04G0460000 Rorug07G0023200
rosa_samantha	Rh5AG042700 Rh5BG042400 Rh5BG086900 Rh5BG087100 Rh5CG047200 Rh5DG042700 Rh7AG150800 Rh7BG152400 Rh7CG156000 Rh7DG151800
rosa_wichuraiana	Rw5G004150 Rw7G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1986
AarI	CACCTGC	1 cut(s)	1087
AasI	GACNNNNNNGTC	1 cut(s)	186
AatII	GACGTC	1 cut(s)	190
Acc36I	ACCTGC	1 cut(s)	1087
AccB1I	GGYRCC	1 cut(s)	64
AccB7I	CCANNNNNTGG	1 cut(s)	1236
AccBSI	CCGCTC	3 cut(s)	511, 802, 1402
AccII	CGCG	1 cut(s)	43
AciI	CCGC	4 cut(s)	43, 511, 802, 1402
AclI	AACGTT	1 cut(s)	399
AclWI	GGATC	3 cut(s)	121, 205, 414
AcsI	RAATTY	4 cut(s)	90, 773, 1217, 1583
AcuI	CTGAAG	3 cut(s)	39, 1662, 1962
AcvI	CACGTG	1 cut(s)	287
AcyI	GRCGYC	1 cut(s)	187
AfaI	GTAC	6 cut(s)	326, 353, 866, 1171, 1556, 1627
AfiI	CCNNNNNNNGG	3 cut(s)	241, 1236, 1287
AgeI	ACCGGT	1 cut(s)	1280
AjuI	GAANNNNNNNTTGG	4 cut(s)	459, 491, 1005, 1037
Alw21I	GWGCWC	3 cut(s)	292, 1288, 1827
Alw26I	GTCTC	3 cut(s)	1199, 1422, 1802
Alw44I	GTGCAC	1 cut(s)	1284
AlwI	GGATC	3 cut(s)	121, 205, 414
Ama87I	CYCGRG	3 cut(s)	105, 429, 1826
ApaLI	GTGCAC	1 cut(s)	1284
ApeKI	GCWGC	3 cut(s)	1247, 1540, 1979
ApoI	RAATTY	4 cut(s)	90, 773, 1217, 1583
ArsI	GACNNNNNNTTYG	2 cut(s)	977, 1009
AseI	ATTAAT	1 cut(s)	1125
AsiGI	ACCGGT	1 cut(s)	1280
Asp700I	GAANNNNTTC	1 cut(s)	1094
AspLEI	GCGC	1 cut(s)	1709
AspS9I	GGNCC	2 cut(s)	205, 1621
AsuC2I	CCSGG	2 cut(s)	7, 62
AsuHPI	GGTGA	4 cut(s)	519, 1270, 1832, 2018
AsuII	TTCGAA	2 cut(s)	777, 1665
AsuNHI	GCTAGC	1 cut(s)	691
AvaI	CYCGRG	3 cut(s)	105, 429, 1826
AvaII	GGWCC	2 cut(s)	205, 1621
BaeGI	GKGCMC	1 cut(s)	1288
BanI	GGYRCC	1 cut(s)	64
BanII	GRGCYC	1 cut(s)	1827
BarI	GAAGNNNNNNTAC	2 cut(s)	443, 475
BauI	CACGAG	1 cut(s)	1173
BbrPI	CACGTG	1 cut(s)	287
BbsI	GAAGAC	4 cut(s)	1556, 1598, 1698, 1902
Bbv12I	GWGCWC	3 cut(s)	292, 1288, 1827
BbvCI	CCTCAGC	1 cut(s)	855
BbvI	GCAGC	3 cut(s)	1234, 1527, 1966
BccI	CCATC	2 cut(s)	219, 1348
BceAI	ACGGC	3 cut(s)	1304, 1711, 1915
BcgI	CGANNNNNNTGC	2 cut(s)	1655, 1689
BclI	TGATCA	2 cut(s)	436, 832
BcnI	CCSGG	2 cut(s)	7, 62
BcoDI	GTCTC	3 cut(s)	1199, 1422, 1802
BfaI	CTAG	6 cut(s)	495, 692, 696, 807, 1488, 1526
BfmI	CTRYAG	3 cut(s)	81, 1248, 1905
BfoI	RGCGCY	1 cut(s)	1710
BfuAI	ACCTGC	1 cut(s)	1087
BglII	AGATCT	1 cut(s)	501
BisI	GCNGC	3 cut(s)	1248, 1541, 1980
BlsI	GCNGC	3 cut(s)	1249, 1542, 1981
Bme1390I	CCNGG	2 cut(s)	7, 62
Bme18I	GGWCC	2 cut(s)	205, 1621
BmeT110I	CYCGRG	3 cut(s)	105, 429, 1826
BmgT120I	GGNCC	2 cut(s)	205, 1621
BmiI	GGNNCC	2 cut(s)	66, 332
BmrFI	CCNGG	2 cut(s)	7, 62
BmsI	GCATC	4 cut(s)	4, 776, 910, 1707
BmtI	GCTAGC	1 cut(s)	695
BoxI	GACNNNNGTC	1 cut(s)	44
BpiI	GAAGAC	4 cut(s)	1556, 1598, 1698, 1902
BplI	GAGNNNNNCTC	2 cut(s)	1179, 1211
BpmI	CTGGAG	1 cut(s)	510
Bpu10I	CCTNAGC	3 cut(s)	138, 855, 1536
Bpu14I	TTCGAA	2 cut(s)	777, 1665
BpuEI	CTTGAG	4 cut(s)	1181, 1346, 1853, 1949
BpuMI	CCSGG	2 cut(s)	7, 62
Bsa29I	ATCGAT	2 cut(s)	599, 1377
BsaAI	YACGTR	1 cut(s)	287
BsaHI	GRCGYC	1 cut(s)	187
BsaI	GGTCTC	1 cut(s)	1422
BsaJI	CCNNGG	2 cut(s)	32, 60
BsaWI	WCCGGW	2 cut(s)	1280, 1756
Bsc4I	CCNNNNNNNGG	3 cut(s)	241, 1236, 1287
Bse118I	RCCGGY	1 cut(s)	1280
Bse1I	ACTGG	3 cut(s)	493, 527, 1887
Bse3DI	GCAATG	1 cut(s)	1633
BseCI	ATCGAT	2 cut(s)	599, 1377
BseDI	CCNNGG	2 cut(s)	32, 60
BseGI	GGATG	5 cut(s)	231, 522, 625, 925, 1837
BseLI	CCNNNNNNNGG	3 cut(s)	241, 1236, 1287
BseMI	GCAATG	1 cut(s)	1633
BseMII	CTCAG	8 cut(s)	114, 153, 738, 846, 1413, 1443, 1527, 1529
BseNI	ACTGG	3 cut(s)	493, 527, 1887
BseRI	GAGGAG	1 cut(s)	872
BseSI	GKGCMC	1 cut(s)	1288
BseXI	GCAGC	3 cut(s)	1234, 1527, 1966
Bsh1236I	CGCG	1 cut(s)	43
BshNI	GGYRCC	1 cut(s)	64
BshTI	ACCGGT	1 cut(s)	1280
BshVI	ATCGAT	2 cut(s)	599, 1377
BsiHKAI	GWGCWC	3 cut(s)	292, 1288, 1827
BsiHKCI	CYCGRG	3 cut(s)	105, 429, 1826
BsiSI	CCGG	4 cut(s)	6, 62, 1281, 1757
BslFI	GGGAC	1 cut(s)	1966
BslI	CCNNNNNNNGG	3 cut(s)	241, 1236, 1287
BsmAI	GTCTC	3 cut(s)	1199, 1422, 1802
BsmFI	GGGAC	1 cut(s)	1966
BsmI	GAATGC	1 cut(s)	2018
Bso31I	GGTCTC	1 cut(s)	1422
BsoBI	CYCGRG	3 cut(s)	105, 429, 1826
Bsp119I	TTCGAA	2 cut(s)	777, 1665
Bsp1286I	GDGCHC	3 cut(s)	292, 1288, 1827
Bsp1407I	TGTACA	1 cut(s)	864
Bsp143I	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
BspACI	CCGC	4 cut(s)	43, 511, 802, 1402
BspCNI	CTCAG	8 cut(s)	115, 154, 739, 847, 1414, 1444, 1528, 1528
BspDI	ATCGAT	2 cut(s)	599, 1377
BspFNI	CGCG	1 cut(s)	43
BspLI	GGNNCC	2 cut(s)	66, 332
BspMAI	CTGCAG	2 cut(s)	85, 1252
BspMI	ACCTGC	1 cut(s)	1087
BspOI	GCTAGC	1 cut(s)	695
BspPI	GGATC	3 cut(s)	121, 205, 414
BspQI	GCTCTTC	2 cut(s)	844, 1764
BspT104I	TTCGAA	2 cut(s)	777, 1665
BspT107I	GGYRCC	1 cut(s)	64
BspTNI	GGTCTC	1 cut(s)	1422
BsrBI	CCGCTC	3 cut(s)	511, 802, 1402
BsrDI	GCAATG	1 cut(s)	1633
BsrFI	RCCGGY	1 cut(s)	1280
BsrGI	TGTACA	1 cut(s)	864
BsrI	ACTGG	3 cut(s)	493, 527, 1887
BssAI	RCCGGY	1 cut(s)	1280
BssECI	CCNNGG	2 cut(s)	32, 60
BssMI	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
BssNI	GRCGYC	1 cut(s)	187
BssSI	CACGAG	1 cut(s)	1173
Bst2BI	CACGAG	1 cut(s)	1173
Bst4CI	ACNGT	2 cut(s)	894, 1625
Bst6I	CTCTTC	8 cut(s)	258, 462, 844, 932, 1008, 1137, 1764, 1868
BstACI	GRCGYC	1 cut(s)	187
BstAUI	TGTACA	1 cut(s)	864
BstBAI	YACGTR	1 cut(s)	287
BstBI	TTCGAA	2 cut(s)	777, 1665
BstC8I	GCNNGC	6 cut(s)	693, 804, 1245, 1470, 1521, 1776
BstDSI	CCRYGG	1 cut(s)	32
BstEII	GGTNACC	1 cut(s)	525
BstF5I	GGATG	5 cut(s)	231, 522, 625, 925, 1837
BstFNI	CGCG	1 cut(s)	43
BstH2I	RGCGCY	1 cut(s)	1710
BstHHI	GCGC	1 cut(s)	1709
BstKTI	GATC	9 cut(s)	129, 213, 409, 439, 504, 535, 599, 835, 1719
BstMAI	GTCTC	3 cut(s)	1199, 1422, 1802
BstMBI	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
BstMWI	GCNNNNNNNGC	3 cut(s)	1540, 1704, 1780
BstNSI	RCATGY	1 cut(s)	1534
BstPAI	GACNNNNGTC	1 cut(s)	44
BstPI	GGTNACC	1 cut(s)	525
BstSCI	CCNGG	2 cut(s)	5, 60
BstSFI	CTRYAG	3 cut(s)	81, 1248, 1905
BstSLI	GKGCMC	1 cut(s)	1288
BstUI	CGCG	1 cut(s)	43
BstV1I	GCAGC	3 cut(s)	1234, 1527, 1966
BstV2I	GAAGAC	4 cut(s)	1556, 1598, 1698, 1902
BstX2I	RGATCY	3 cut(s)	126, 210, 501
BstYI	RGATCY	3 cut(s)	126, 210, 501
Bsu15I	ATCGAT	2 cut(s)	599, 1377
BsuTUI	ATCGAT	2 cut(s)	599, 1377
BtgI	CCRYGG	1 cut(s)	32
BtsCI	GGATG	5 cut(s)	231, 522, 625, 925, 1837
BtsI	GCAGTG	2 cut(s)	78, 723
BtsIMutI	CAGTG	3 cut(s)	78, 150, 723
BveI	ACCTGC	1 cut(s)	1087
Cac8I	GCNNGC	6 cut(s)	693, 804, 1245, 1470, 1521, 1776
CfoI	GCGC	1 cut(s)	1709
Cfr10I	RCCGGY	1 cut(s)	1280
Cfr13I	GGNCC	2 cut(s)	205, 1621
ClaI	ATCGAT	2 cut(s)	599, 1377
CseI	GACGC	2 cut(s)	49, 2005
Csp6I	GTAC	6 cut(s)	325, 352, 865, 1170, 1555, 1626
CspAI	ACCGGT	1 cut(s)	1280
CviAII	CATG	4 cut(s)	463, 990, 1531, 1804
CviQI	GTAC	6 cut(s)	325, 352, 865, 1170, 1555, 1626
DpnI	GATC	9 cut(s)	128, 212, 408, 438, 503, 534, 598, 834, 1718
DpnII	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
DrdI	GACNNNNNNGTC	1 cut(s)	186
DseDI	GACNNNNNNGTC	1 cut(s)	186
Eam1104I	CTCTTC	8 cut(s)	258, 462, 844, 932, 1008, 1137, 1764, 1868
EarI	CTCTTC	8 cut(s)	258, 462, 844, 932, 1008, 1137, 1764, 1868
Ecl136II	GAGCTC	1 cut(s)	1825
Eco24I	GRGCYC	1 cut(s)	1827
Eco31I	GGTCTC	1 cut(s)	1422
Eco32I	GATATC	1 cut(s)	1572
Eco47I	GGWCC	2 cut(s)	205, 1621
Eco53kI	GAGCTC	1 cut(s)	1825
Eco57I	CTGAAG	3 cut(s)	39, 1662, 1962
Eco72I	CACGTG	1 cut(s)	287
Eco88I	CYCGRG	3 cut(s)	105, 429, 1826
Eco91I	GGTNACC	1 cut(s)	525
EcoICRI	GAGCTC	1 cut(s)	1825
EcoO65I	GGTNACC	1 cut(s)	525
EcoRI	GAATTC	2 cut(s)	773, 1583
EcoRV	GATATC	1 cut(s)	1572
EcoT38I	GRGCYC	1 cut(s)	1827
FaeI	CATG	4 cut(s)	466, 993, 1534, 1807
FalI	AAGNNNNNCTT	4 cut(s)	12, 44, 459, 491
FaqI	GGGAC	1 cut(s)	1966
FatI	CATG	4 cut(s)	462, 989, 1530, 1803
FauI	CCCGC	2 cut(s)	36, 795
FbaI	TGATCA	2 cut(s)	436, 832
Fnu4HI	GCNGC	3 cut(s)	1248, 1541, 1980
FokI	GGATG	5 cut(s)	218, 529, 612, 932, 1844
FriOI	GRGCYC	1 cut(s)	1827
Fsp4HI	GCNGC	3 cut(s)	1248, 1541, 1980
FspBI	CTAG	6 cut(s)	495, 692, 696, 807, 1488, 1526
GlaI	GCGC	1 cut(s)	1708
GluI	GCNGC	3 cut(s)	1248, 1541, 1980
GsuI	CTGGAG	1 cut(s)	510
HaeII	RGCGCY	1 cut(s)	1710
HapII	CCGG	4 cut(s)	6, 62, 1281, 1757
HgaI	GACGC	2 cut(s)	49, 2005
HhaI	GCGC	1 cut(s)	1709
Hin1I	GRCGYC	1 cut(s)	187
Hin1II	CATG	4 cut(s)	466, 993, 1534, 1807
Hin6I	GCGC	1 cut(s)	1707
HinP1I	GCGC	1 cut(s)	1707
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	6 cut(s)	26, 473, 540, 1199, 1668, 1997
HpaII	CCGG	4 cut(s)	6, 62, 1281, 1757
HphI	GGTGA	4 cut(s)	519, 1270, 1832, 2018
Hpy166II	GTNNAC	8 cut(s)	134, 385, 706, 721, 1172, 1183, 1286, 1372
Hpy188I	TCNGA	7 cut(s)	172, 185, 192, 630, 1576, 1681, 2021
Hpy8I	GTNNAC	8 cut(s)	134, 385, 706, 721, 1172, 1183, 1286, 1372
Hpy99I	CGWCG	5 cut(s)	43, 189, 192, 219, 1960
HpyAV	CCTTC	3 cut(s)	311, 902, 1571
HpyCH4III	ACNGT	2 cut(s)	894, 1625
HpyCH4IV	ACGT	7 cut(s)	187, 286, 399, 589, 1168, 1483, 1553
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1540, 1704, 1780
HpySE526I	ACGT	7 cut(s)	187, 286, 399, 589, 1168, 1483, 1553
Hsp92I	GRCGYC	1 cut(s)	187
Hsp92II	CATG	4 cut(s)	466, 993, 1534, 1807
HspAI	GCGC	1 cut(s)	1707
Ksp22I	TGATCA	2 cut(s)	436, 832
Kzo9I	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
LguI	GCTCTTC	2 cut(s)	844, 1764
LmnI	GCTCC	4 cut(s)	491, 1324, 1759, 1860
Lsp1109I	GCAGC	3 cut(s)	1234, 1527, 1966
LweI	GCATC	4 cut(s)	4, 776, 910, 1707
MaeI	CTAG	6 cut(s)	495, 692, 696, 807, 1488, 1526
MaeII	ACGT	7 cut(s)	187, 286, 399, 589, 1168, 1483, 1553
MaeIII	GTNAC	3 cut(s)	415, 484, 525
MalI	GATC	9 cut(s)	128, 212, 408, 438, 503, 534, 598, 834, 1718
MbiI	CCGCTC	3 cut(s)	511, 802, 1402
MboI	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
MfeI	CAATTG	1 cut(s)	1268
MflI	RGATCY	3 cut(s)	126, 210, 501
MhlI	GDGCHC	3 cut(s)	292, 1288, 1827
MluCI	AATT	8 cut(s)	90, 773, 1126, 1217, 1268, 1391, 1426, 1583
MlyI	GAGTC	4 cut(s)	174, 275, 980, 1608
MmeI	TCCRAC	2 cut(s)	170, 208
MroXI	GAANNNNTTC	1 cut(s)	1094
MseI	TTAA	6 cut(s)	558, 687, 1125, 1329, 1800, 2001
MslI	CAYNNNNRTG	1 cut(s)	1352
MspI	CCGG	4 cut(s)	6, 62, 1281, 1757
MspR9I	CCNGG	2 cut(s)	7, 62
MunI	CAATTG	1 cut(s)	1268
Mva1269I	GAATGC	1 cut(s)	2018
MvnI	CGCG	1 cut(s)	43
MwoI	GCNNNNNNNGC	3 cut(s)	1540, 1704, 1780
NciI	CCSGG	2 cut(s)	7, 62
NdeII	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
NheI	GCTAGC	1 cut(s)	691
NlaIII	CATG	4 cut(s)	466, 993, 1534, 1807
NlaIV	GGNNCC	2 cut(s)	66, 332
NmuCI	GTSAC	1 cut(s)	525
NspI	RCATGY	1 cut(s)	1534
NspV	TTCGAA	2 cut(s)	777, 1665
PaeR7I	CTCGAG	2 cut(s)	105, 429
PaqCI	CACCTGC	1 cut(s)	1087
PciSI	GCTCTTC	2 cut(s)	844, 1764
PctI	GAATGC	1 cut(s)	2018
PdmI	GAANNNNTTC	1 cut(s)	1094
PfeI	GAWTC	7 cut(s)	155, 751, 1095, 1273, 1946, 1960, 1969
PflMI	CCANNNNNTGG	1 cut(s)	1236
PinAI	ACCGGT	1 cut(s)	1280
PkrI	GCNGC	3 cut(s)	1249, 1542, 1981
PleI	GAGTC	4 cut(s)	174, 274, 980, 1608
PmaCI	CACGTG	1 cut(s)	287
PmlI	CACGTG	1 cut(s)	287
PpsI	GAGTC	4 cut(s)	174, 274, 980, 1608
Ppu21I	YACGTR	1 cut(s)	287
PshAI	GACNNNNGTC	1 cut(s)	44
PshBI	ATTAAT	1 cut(s)	1125
PsiI	TTATAA	1 cut(s)	1986
Psp124BI	GAGCTC	1 cut(s)	1827
Psp1406I	AACGTT	1 cut(s)	399
PspCI	CACGTG	1 cut(s)	287
PspEI	GGTNACC	1 cut(s)	525
PspN4I	GGNNCC	2 cut(s)	66, 332
PspPI	GGNCC	2 cut(s)	205, 1621
PspXI	VCTCGAGB	1 cut(s)	429
PstI	CTGCAG	2 cut(s)	85, 1252
PsuI	RGATCY	3 cut(s)	126, 210, 501
RsaI	GTAC	6 cut(s)	326, 353, 866, 1171, 1556, 1627
RsaNI	GTAC	6 cut(s)	325, 352, 865, 1170, 1555, 1626
RseI	CAYNNNNRTG	1 cut(s)	1352
SacI	GAGCTC	1 cut(s)	1827
SapI	GCTCTTC	2 cut(s)	844, 1764
SaqAI	TTAA	6 cut(s)	558, 687, 1125, 1329, 1800, 2001
SatI	GCNGC	3 cut(s)	1248, 1541, 1980
Sau3AI	GATC	9 cut(s)	126, 210, 406, 436, 501, 532, 596, 832, 1716
Sau96I	GGNCC	2 cut(s)	205, 1621
SchI	GAGTC	4 cut(s)	174, 275, 980, 1608
ScrFI	CCNGG	2 cut(s)	7, 62
SduI	GDGCHC	3 cut(s)	292, 1288, 1827
SfaNI	GCATC	4 cut(s)	4, 776, 910, 1707
SfcI	CTRYAG	3 cut(s)	81, 1248, 1905
Sfr274I	CTCGAG	2 cut(s)	105, 429
SfuI	TTCGAA	2 cut(s)	777, 1665
SgrAI	CRCCGGYG	1 cut(s)	1280
SinI	GGWCC	2 cut(s)	205, 1621
SlaI	CTCGAG	2 cut(s)	105, 429
SmiMI	CAYNNNNRTG	1 cut(s)	1352
SmlI	CTYRAG	6 cut(s)	105, 429, 1196, 1361, 1868, 1964
SmoI	CTYRAG	6 cut(s)	105, 429, 1196, 1361, 1868, 1964
Sse9I	AATT	8 cut(s)	90, 773, 1126, 1217, 1268, 1391, 1426, 1583
SsiI	CCGC	4 cut(s)	43, 511, 802, 1402
SspMI	CTAG	6 cut(s)	495, 692, 696, 807, 1488, 1526
SstI	GAGCTC	1 cut(s)	1827
StyD4I	CCNGG	2 cut(s)	5, 60
TaaI	ACNGT	2 cut(s)	894, 1625
TaiI	ACGT	7 cut(s)	190, 289, 402, 592, 1171, 1486, 1556
TasI	AATT	8 cut(s)	90, 773, 1126, 1217, 1268, 1391, 1426, 1583
TatI	WGTACW	2 cut(s)	324, 864
TfiI	GAWTC	7 cut(s)	155, 751, 1095, 1273, 1946, 1960, 1969
Tru1I	TTAA	6 cut(s)	558, 687, 1125, 1329, 1800, 2001
Tru9I	TTAA	6 cut(s)	558, 687, 1125, 1329, 1800, 2001
TscAI	CASTG	3 cut(s)	85, 157, 723
TseFI	GTSAC	1 cut(s)	525
TseI	GCWGC	3 cut(s)	1247, 1540, 1979
Tsp45I	GTSAC	1 cut(s)	525
TspDTI	ATGAA	9 cut(s)	383, 533, 683, 753, 966, 972, 1155, 1272, 1929
TspGWI	ACGGA	3 cut(s)	49, 119, 203
TspRI	CASTG	3 cut(s)	85, 157, 723
Van91I	CCANNNNNTGG	1 cut(s)	1236
VneI	GTGCAC	1 cut(s)	1284
VpaK11BI	GGWCC	2 cut(s)	205, 1621
VspI	ATTAAT	1 cut(s)	1125
XapI	RAATTY	4 cut(s)	90, 773, 1217, 1583
XbaI	TCTAGA	1 cut(s)	1525
XceI	RCATGY	1 cut(s)	1534
XhoI	CTCGAG	2 cut(s)	105, 429
XmnI	GAANNNNTTC	1 cut(s)	1094
XspI	CTAG	6 cut(s)	495, 692, 696, 807, 1488, 1526
ZraI	GACGTC	1 cut(s)	188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.