Zinc finger, C3HC4 type (RING finger)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 428 |
| AccI | GTMKAC | 2 cut(s) | 941, 1261 |
| AccII | CGCG | 2 cut(s) | 63, 766 |
| AciI | CCGC | 4 cut(s) | 158, 764, 1092, 1403 |
| AclWI | GGATC | 3 cut(s) | 99, 557, 1213 |
| AcsI | RAATTY | 2 cut(s) | 569, 1325 |
| AcuI | CTGAAG | 5 cut(s) | 876, 957, 1322, 1377, 1422 |
| AcyI | GRCGYC | 1 cut(s) | 192 |
| AfaI | GTAC | 1 cut(s) | 907 |
| AgsI | TTSAA | 6 cut(s) | 671, 954, 1181, 1351, 1367, 1518 |
| AjiI | CACGTC | 1 cut(s) | 400 |
| AleI | CACNNNNGTG | 1 cut(s) | 1019 |
| AluBI | AGCT | 8 cut(s) | 21, 83, 683, 833, 1237, 1318, 1436, 1544 |
| AluI | AGCT | 8 cut(s) | 21, 83, 683, 833, 1237, 1318, 1436, 1544 |
| Alw26I | GTCTC | 8 cut(s) | 104, 345, 461, 552, 784, 870, 1023, 1246 |
| AlwI | GGATC | 3 cut(s) | 99, 557, 1213 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 468 |
| Ama87I | CYCGRG | 2 cut(s) | 1049, 1067 |
| ApeKI | GCWGC | 6 cut(s) | 587, 743, 1191, 1194, 1442, 1445 |
| ApoI | RAATTY | 2 cut(s) | 569, 1325 |
| AspA2I | CCTAGG | 1 cut(s) | 418 |
| AsuC2I | CCSGG | 3 cut(s) | 473, 1050, 1051 |
| AsuHPI | GGTGA | 2 cut(s) | 224, 753 |
| AvaI | CYCGRG | 2 cut(s) | 1049, 1067 |
| AvrII | CCTAGG | 1 cut(s) | 418 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 897, 930 |
| BbsI | GAAGAC | 4 cut(s) | 171, 882, 1358, 1482 |
| BbvI | GCAGC | 6 cut(s) | 574, 755, 1203, 1206, 1454, 1457 |
| BccI | CCATC | 4 cut(s) | 203, 343, 442, 1196 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 500, 534 |
| BciVI | GTATCC | 1 cut(s) | 1243 |
| BclI | TGATCA | 1 cut(s) | 1536 |
| BcnI | CCSGG | 3 cut(s) | 473, 1050, 1051 |
| BcoDI | GTCTC | 8 cut(s) | 104, 345, 461, 552, 784, 870, 1023, 1246 |
| BfaI | CTAG | 4 cut(s) | 380, 419, 774, 1209 |
| BfmI | CTRYAG | 2 cut(s) | 678, 1422 |
| BfuI | GTATCC | 1 cut(s) | 1243 |
| BisI | GCNGC | 7 cut(s) | 588, 744, 1192, 1195, 1404, 1443, 1446 |
| BlnI | CCTAGG | 1 cut(s) | 418 |
| BlsI | GCNGC | 7 cut(s) | 589, 745, 1193, 1196, 1405, 1444, 1447 |
| Bme1390I | CCNGG | 3 cut(s) | 473, 1050, 1051 |
| BmeT110I | CYCGRG | 2 cut(s) | 1049, 1067 |
| BmgBI | CACGTC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 1 cut(s) | 781 |
| BmrFI | CCNGG | 3 cut(s) | 473, 1050, 1051 |
| BmsI | GCATC | 7 cut(s) | 208, 565, 683, 833, 1390, 1452, 1457 |
| BpiI | GAAGAC | 4 cut(s) | 171, 882, 1358, 1482 |
| BpmI | CTGGAG | 4 cut(s) | 369, 766, 1152, 1416 |
| BpuMI | CCSGG | 3 cut(s) | 473, 1050, 1051 |
| Bsa29I | ATCGAT | 1 cut(s) | 1506 |
| BsaHI | GRCGYC | 1 cut(s) | 192 |
| BsaI | GGTCTC | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 3 cut(s) | 195, 418, 1049 |
| BsaWI | WCCGGW | 1 cut(s) | 1548 |
| Bse118I | RCCGGY | 1 cut(s) | 543 |
| Bse1I | ACTGG | 2 cut(s) | 633, 1080 |
| BseCI | ATCGAT | 1 cut(s) | 1506 |
| BseDI | CCNNGG | 3 cut(s) | 195, 418, 1049 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseMII | CTCAG | 5 cut(s) | 24, 696, 698, 1457, 1554 |
| BseNI | ACTGG | 2 cut(s) | 633, 1080 |
| BseRI | GAGGAG | 1 cut(s) | 239 |
| BseXI | GCAGC | 6 cut(s) | 574, 755, 1203, 1206, 1454, 1457 |
| BsgI | GTGCAG | 2 cut(s) | 422, 1023 |
| Bsh1236I | CGCG | 2 cut(s) | 63, 766 |
| Bsh1285I | CGRYCG | 1 cut(s) | 67 |
| BshVI | ATCGAT | 1 cut(s) | 1506 |
| BsiEI | CGRYCG | 1 cut(s) | 67 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1049, 1067 |
| BsiSI | CCGG | 5 cut(s) | 472, 544, 916, 1050, 1549 |
| BslFI | GGGAC | 1 cut(s) | 1108 |
| BsmAI | GTCTC | 8 cut(s) | 104, 345, 461, 552, 784, 870, 1023, 1246 |
| BsmBI | CGTCTC | 3 cut(s) | 104, 552, 784 |
| BsmFI | GGGAC | 1 cut(s) | 1108 |
| BsmI | GAATGC | 1 cut(s) | 1162 |
| Bso31I | GGTCTC | 1 cut(s) | 345 |
| BsoBI | CYCGRG | 2 cut(s) | 1049, 1067 |
| Bsp143I | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| BspACI | CCGC | 4 cut(s) | 158, 764, 1092, 1403 |
| BspCNI | CTCAG | 5 cut(s) | 25, 697, 697, 1458, 1555 |
| BspDI | ATCGAT | 1 cut(s) | 1506 |
| BspFNI | CGCG | 2 cut(s) | 63, 766 |
| BspHI | TCATGA | 1 cut(s) | 835 |
| BspLI | GGNNCC | 1 cut(s) | 781 |
| BspMAI | CTGCAG | 1 cut(s) | 1426 |
| BspPI | GGATC | 3 cut(s) | 99, 557, 1213 |
| BspTNI | GGTCTC | 1 cut(s) | 345 |
| BsrFI | RCCGGY | 1 cut(s) | 543 |
| BsrI | ACTGG | 2 cut(s) | 633, 1080 |
| BssAI | RCCGGY | 1 cut(s) | 543 |
| BssECI | CCNNGG | 3 cut(s) | 195, 418, 1049 |
| BssMI | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| BssNAI | GTATAC | 1 cut(s) | 1262 |
| BssNI | GRCGYC | 1 cut(s) | 192 |
| BssT1I | CCWWGG | 1 cut(s) | 418 |
| Bst1107I | GTATAC | 1 cut(s) | 1262 |
| Bst4CI | ACNGT | 3 cut(s) | 445, 939, 1001 |
| Bst6I | CTCTTC | 8 cut(s) | 114, 270, 285, 615, 868, 1081, 1353, 1381 |
| BstACI | GRCGYC | 1 cut(s) | 192 |
| BstC8I | GCNNGC | 3 cut(s) | 523, 541, 545 |
| BstDEI | CTNAG | 6 cut(s) | 33, 554, 684, 705, 1466, 1563 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstFNI | CGCG | 2 cut(s) | 63, 766 |
| BstKTI | GATC | 7 cut(s) | 94, 379, 565, 728, 761, 1208, 1539 |
| BstMAI | GTCTC | 8 cut(s) | 104, 345, 461, 552, 784, 870, 1023, 1246 |
| BstMBI | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| BstMCI | CGRYCG | 1 cut(s) | 67 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 584, 680, 830, 1243, 1442 |
| BstSCI | CCNGG | 3 cut(s) | 471, 1048, 1049 |
| BstSFI | CTRYAG | 2 cut(s) | 678, 1422 |
| BstUI | CGCG | 2 cut(s) | 63, 766 |
| BstV1I | GCAGC | 6 cut(s) | 574, 755, 1203, 1206, 1454, 1457 |
| BstV2I | GAAGAC | 4 cut(s) | 171, 882, 1358, 1482 |
| BstX2I | RGATCY | 2 cut(s) | 91, 1205 |
| BstYI | RGATCY | 2 cut(s) | 91, 1205 |
| BstZ17I | GTATAC | 1 cut(s) | 1262 |
| Bsu15I | ATCGAT | 1 cut(s) | 1506 |
| BsuI | GTATCC | 1 cut(s) | 1243 |
| BsuTUI | ATCGAT | 1 cut(s) | 1506 |
| BtrI | CACGTC | 1 cut(s) | 400 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| BtsI | GCAGTG | 2 cut(s) | 410, 1431 |
| BtsIMutI | CAGTG | 2 cut(s) | 410, 1431 |
| Cac8I | GCNNGC | 3 cut(s) | 523, 541, 545 |
| CaiI | CAGNNNCTG | 1 cut(s) | 468 |
| CciI | TCATGA | 1 cut(s) | 835 |
| Cfr10I | RCCGGY | 1 cut(s) | 543 |
| Cfr9I | CCCGGG | 1 cut(s) | 1049 |
| ClaI | ATCGAT | 1 cut(s) | 1506 |
| CseI | GACGC | 1 cut(s) | 200 |
| Csp6I | GTAC | 1 cut(s) | 906 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1288, 1323 |
| CviAII | CATG | 5 cut(s) | 808, 836, 1115, 1229, 1523 |
| CviQI | GTAC | 1 cut(s) | 906 |
| DdeI | CTNAG | 6 cut(s) | 33, 554, 684, 705, 1466, 1563 |
| DpnI | GATC | 7 cut(s) | 93, 378, 564, 727, 760, 1207, 1538 |
| DpnII | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| Eam1104I | CTCTTC | 8 cut(s) | 114, 270, 285, 615, 868, 1081, 1353, 1381 |
| EarI | CTCTTC | 8 cut(s) | 114, 270, 285, 615, 868, 1081, 1353, 1381 |
| Eco130I | CCWWGG | 1 cut(s) | 418 |
| Eco31I | GGTCTC | 1 cut(s) | 345 |
| Eco32I | GATATC | 1 cut(s) | 690 |
| Eco57I | CTGAAG | 5 cut(s) | 876, 957, 1322, 1377, 1422 |
| Eco88I | CYCGRG | 2 cut(s) | 1049, 1067 |
| EcoRI | GAATTC | 1 cut(s) | 1325 |
| EcoRV | GATATC | 1 cut(s) | 690 |
| EcoT14I | CCWWGG | 1 cut(s) | 418 |
| ErhI | CCWWGG | 1 cut(s) | 418 |
| Esp3I | CGTCTC | 3 cut(s) | 104, 552, 784 |
| FaeI | CATG | 5 cut(s) | 811, 839, 1118, 1232, 1526 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 322, 354 |
| FaqI | GGGAC | 1 cut(s) | 1108 |
| FatI | CATG | 5 cut(s) | 807, 835, 1114, 1228, 1522 |
| FauI | CCCGC | 1 cut(s) | 1085 |
| FbaI | TGATCA | 1 cut(s) | 1536 |
| FblI | GTMKAC | 2 cut(s) | 941, 1261 |
| Fnu4HI | GCNGC | 7 cut(s) | 588, 744, 1192, 1195, 1404, 1443, 1446 |
| FokI | GGATG | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 7 cut(s) | 588, 744, 1192, 1195, 1404, 1443, 1446 |
| FspBI | CTAG | 4 cut(s) | 380, 419, 774, 1209 |
| GluI | GCNGC | 7 cut(s) | 588, 744, 1192, 1195, 1404, 1443, 1446 |
| GsuI | CTGGAG | 4 cut(s) | 369, 766, 1152, 1416 |
| HapII | CCGG | 5 cut(s) | 472, 544, 916, 1050, 1549 |
| HgaI | GACGC | 1 cut(s) | 200 |
| Hin1I | GRCGYC | 1 cut(s) | 192 |
| Hin1II | CATG | 5 cut(s) | 811, 839, 1118, 1232, 1526 |
| HindIII | AAGCTT | 1 cut(s) | 1235 |
| HinfI | GANTC | 7 cut(s) | 37, 317, 667, 884, 1063, 1414, 1429 |
| HpaII | CCGG | 5 cut(s) | 472, 544, 916, 1050, 1549 |
| HphI | GGTGA | 2 cut(s) | 224, 753 |
| Hpy166II | GTNNAC | 3 cut(s) | 942, 1168, 1262 |
| Hpy188I | TCNGA | 7 cut(s) | 361, 567, 687, 706, 829, 895, 1341 |
| Hpy188III | TCNNGA | 8 cut(s) | 10, 41, 348, 638, 783, 836, 1067, 1131 |
| Hpy8I | GTNNAC | 3 cut(s) | 942, 1168, 1262 |
| Hpy99I | CGWCG | 3 cut(s) | 31, 155, 194 |
| HpyAV | CCTTC | 4 cut(s) | 97, 122, 780, 975 |
| HpyCH4III | ACNGT | 3 cut(s) | 445, 939, 1001 |
| HpyCH4IV | ACGT | 2 cut(s) | 399, 928 |
| HpyCH4V | TGCA | 8 cut(s) | 221, 403, 525, 539, 980, 1004, 1334, 1424 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 584, 680, 830, 1243, 1442 |
| HpyF3I | CTNAG | 6 cut(s) | 33, 554, 684, 705, 1466, 1563 |
| HpySE526I | ACGT | 2 cut(s) | 399, 928 |
| Hsp92I | GRCGYC | 1 cut(s) | 192 |
| Hsp92II | CATG | 5 cut(s) | 811, 839, 1118, 1232, 1526 |
| KroI | GCCGGC | 1 cut(s) | 543 |
| KroNI | GCCGGC | 1 cut(s) | 545 |
| Ksp22I | TGATCA | 1 cut(s) | 1536 |
| Kzo9I | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| LmnI | GCTCC | 2 cut(s) | 785, 1323 |
| Lsp1109I | GCAGC | 6 cut(s) | 574, 755, 1203, 1206, 1454, 1457 |
| LweI | GCATC | 7 cut(s) | 208, 565, 683, 833, 1390, 1452, 1457 |
| MaeI | CTAG | 4 cut(s) | 380, 419, 774, 1209 |
| MaeII | ACGT | 2 cut(s) | 399, 928 |
| MaeIII | GTNAC | 5 cut(s) | 212, 995, 1103, 1375, 1426 |
| MalI | GATC | 7 cut(s) | 93, 378, 564, 727, 760, 1207, 1538 |
| MboI | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| MflI | RGATCY | 2 cut(s) | 91, 1205 |
| MluCI | AATT | 4 cut(s) | 372, 569, 1325, 1367 |
| MlyI | GAGTC | 1 cut(s) | 1423 |
| MmeI | TCCRAC | 1 cut(s) | 1200 |
| MroNI | GCCGGC | 1 cut(s) | 543 |
| MseI | TTAA | 2 cut(s) | 72, 752 |
| MslI | CAYNNNNRTG | 3 cut(s) | 642, 840, 1019 |
| MspI | CCGG | 5 cut(s) | 472, 544, 916, 1050, 1549 |
| MspR9I | CCNGG | 3 cut(s) | 473, 1050, 1051 |
| Mva1269I | GAATGC | 1 cut(s) | 1162 |
| MvnI | CGCG | 2 cut(s) | 63, 766 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 584, 680, 830, 1243, 1442 |
| NaeI | GCCGGC | 1 cut(s) | 545 |
| NciI | CCSGG | 3 cut(s) | 473, 1050, 1051 |
| NdeII | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| NgoMIV | GCCGGC | 1 cut(s) | 543 |
| NlaIII | CATG | 5 cut(s) | 811, 839, 1118, 1232, 1526 |
| NlaIV | GGNNCC | 1 cut(s) | 781 |
| NmeAIII | GCCGAG | 1 cut(s) | 220 |
| NmuCI | GTSAC | 2 cut(s) | 212, 1426 |
| OliI | CACNNNNGTG | 1 cut(s) | 1019 |
| PagI | TCATGA | 1 cut(s) | 835 |
| PctI | GAATGC | 1 cut(s) | 1162 |
| PdiI | GCCGGC | 1 cut(s) | 545 |
| PfeI | GAWTC | 6 cut(s) | 37, 317, 667, 884, 1063, 1414 |
| PkrI | GCNGC | 7 cut(s) | 589, 745, 1193, 1196, 1405, 1444, 1447 |
| PleI | GAGTC | 1 cut(s) | 1423 |
| PpsI | GAGTC | 1 cut(s) | 1423 |
| PsiI | TTATAA | 1 cut(s) | 428 |
| PspN4I | GGNNCC | 1 cut(s) | 781 |
| PstI | CTGCAG | 1 cut(s) | 1426 |
| PstNI | CAGNNNCTG | 1 cut(s) | 468 |
| PsuI | RGATCY | 2 cut(s) | 91, 1205 |
| RsaI | GTAC | 1 cut(s) | 907 |
| RsaNI | GTAC | 1 cut(s) | 906 |
| RseI | CAYNNNNRTG | 3 cut(s) | 642, 840, 1019 |
| SaqAI | TTAA | 2 cut(s) | 72, 752 |
| SatI | GCNGC | 7 cut(s) | 588, 744, 1192, 1195, 1404, 1443, 1446 |
| Sau3AI | GATC | 7 cut(s) | 91, 376, 562, 725, 758, 1205, 1536 |
| SchI | GAGTC | 1 cut(s) | 1423 |
| ScrFI | CCNGG | 3 cut(s) | 473, 1050, 1051 |
| SfaNI | GCATC | 7 cut(s) | 208, 565, 683, 833, 1390, 1452, 1457 |
| SfcI | CTRYAG | 2 cut(s) | 678, 1422 |
| SmaI | CCCGGG | 1 cut(s) | 1051 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 642, 840, 1019 |
| Sse9I | AATT | 4 cut(s) | 372, 569, 1325, 1367 |
| SsiI | CCGC | 4 cut(s) | 158, 764, 1092, 1403 |
| SspI | AATATT | 1 cut(s) | 604 |
| SspMI | CTAG | 4 cut(s) | 380, 419, 774, 1209 |
| StyD4I | CCNGG | 3 cut(s) | 471, 1048, 1049 |
| StyI | CCWWGG | 1 cut(s) | 418 |
| TaaI | ACNGT | 3 cut(s) | 445, 939, 1001 |
| TaiI | ACGT | 2 cut(s) | 402, 931 |
| TaqI | TCGA | 1 cut(s) | 1506 |
| TaqII | GACCGA | 1 cut(s) | 81 |
| TasI | AATT | 4 cut(s) | 372, 569, 1325, 1367 |
| TauI | GCSGC | 1 cut(s) | 1406 |
| TfiI | GAWTC | 6 cut(s) | 37, 317, 667, 884, 1063, 1414 |
| Tru1I | TTAA | 2 cut(s) | 72, 752 |
| Tru9I | TTAA | 2 cut(s) | 72, 752 |
| TscAI | CASTG | 2 cut(s) | 410, 1431 |
| TseFI | GTSAC | 2 cut(s) | 212, 1426 |
| TseI | GCWGC | 6 cut(s) | 587, 743, 1191, 1194, 1442, 1445 |
| Tsp45I | GTSAC | 2 cut(s) | 212, 1426 |
| TspDTI | ATGAA | 7 cut(s) | 276, 660, 852, 1217, 1497, 1501, 1539 |
| TspGWI | ACGGA | 3 cut(s) | 380, 808, 1310 |
| TspMI | CCCGGG | 1 cut(s) | 1049 |
| TspRI | CASTG | 2 cut(s) | 410, 1431 |
| XapI | RAATTY | 2 cut(s) | 569, 1325 |
| XmaI | CCCGGG | 1 cut(s) | 1049 |
| XmaJI | CCTAGG | 1 cut(s) | 418 |
| XmiI | GTMKAC | 2 cut(s) | 941, 1261 |
| XspI | CTAG | 4 cut(s) | 380, 419, 774, 1209 |