Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001286

Physical Location & Seq

Genomic Coordinates Forward (+)

40608154 .. 40616260

Gene Structure 8107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G026350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGCCTGCCCAGAAGCGTTCCTTGCCGGACAACCTCACCGACGATGACGACGACGACCCCACACCTCACCACCGCCACCGCCCCAAGCAATCTCGACCCCAAGATGAACTCCTACAACAACAACAACAAGAGCAGCAAGGAGACGTAGTAGTAGAAAAACAACAACAACAAGAGGAGGAGGAGGAAGATGAAGAAGAAAACGACGACGTCGAAGAAGAAGAAGAAGAAGATGAGGAATACGATCGAGATGAAGTTGACGATTATGACGGAAGCCCATCCTCTGCCTCTCAACAAAACCCCGAATTTGTACTTGTACAACTGGCAGATATTCGTAAAGATGTACACTGCCCAATATGTCTCGGGATTATTAAGAAGACACGGACTGTAATGGAATGCCTACACAGGTTTTGCAGGGAATGCATCGACAAGTCAATGCGAATGGGGAACAATGAGTGCCCTGCTTGCCGCACACACTGTGCCAGTCGACGGTCTTTGAGAGATGATCCAAATTATGATGCCATAATTGCAACATTATATCCAGATATTGAGAAATATGAGAAGGAGGAATTGGCTTTCCATGAAGAGGAGAGGACTCGAAATGAGCAGATACAAGCATCAATTGCCCAAATATTCCAACGACAATCAGAAGCTTTAATCAAGAGACGCTCACTTGGCAAAGATACCCAAGATGCATATAATATGAGATCCCTGCGCAATAATCGGAGTGGTCTCCGAAGGAGAAGAAACTCTCAAGCCACTGAACTCCAAGGGTTTGAAGACAATGAGGATGAAAATGACACTAGTAACATGGGCACAAAATCGCCTTCAGCTGAAGAGAGACATACTGAAGTGAGGCCAAGACGGCTAAGAAGACGGACAGGATTTCGATCATCTCAGCCTTCATCATCTGTGACCAATTCAAATGGAGGATGCACTGAAAATGATGTAGAAGTGAGCCGAGAGAACAGGGGAATTTCACCGGGTCTTATGTGGAGCTCTGAAATGCTTGCTTGGGGCCGGGGTGGTGCTCGGAGTCACACTCGGCATGGCATTGCAAGCGGTTGCAGCAATAAGAGTTCTCGAAGCACTCGCTTATCAAAGTTGGTTGATTACCTTCGGAACCTCAAGGAAAACAATGATGAGTTAGATGTTCATCTCATGCTTATTTCTTTGGATAAAAGATGCACACCAAACTTGCAGCAGCCTCACCTTTGCTGTAGGCCGAGTTTGTCAGTCAAGCACCTTTGTGAATATGTTGCTCGTCAAACACCTTTGCAAGCCGAAGAAGTTGAGTTGTTCTCAGTTAAAGGACACCACAATTCCAATGACGAAAAATTGACTGATCACCCATCAGCGTTAATGAATGATCTGGATTCAGTTCCCCTTTTGGTTGATCCATGCAGATATGATTTGCAAATTCTGCAAGCAGAAGAAACTTTGGCAGGGATTAAAGCCAATTGCACTTCCAGTAGGGACCGCTTGATTCTAGCATACAGGCGGAAGGAGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0001709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0032501 GO:0032502 GO:0032991 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045165 GO:0045814 GO:0045892 GO:0045934 GO:0048507 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

503

Amino Acids

57.93

Weight (kDa)

5.19

Isoelectric Point (pI)

81.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	115 - 156	1.1e-07	Ring finger domain
zf-C3HC4_2	PF13923	116 - 155	2.6e-11	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	116 - 155	3.5e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44280 AT5G44280 AT5G44280
fragaria_vesca	FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540
malus_domestica	MD05G1312000.v1.1 MD09G1244000.v1.1 MD10G1291500.v1.1 MD17G1235900.v1.1
prunus_persica	Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1
pyrus_communis	pycom05g28800 pycom09g16250 pycom10g24370
rosa_chinensis	RchiOBHm_Chr2g0127611 RchiOBHm_Chr5g0008911
rosa_laevigata	RLG00000018950 RLG00000031615
rosa_multiflora	Rmu_co8349609.1_g000001 Rmu_sc0004677.1_g000011 Rmu_ssc0000200.1_g000019
rosa_roxburghii	Rroxscaffold_1G00067100 Rroxscaffold_1G00067720 Rroxscaffold_2G00116570
rosa_rugosa	Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug04G0440100
rosa_samantha	Rh2AG324500 Rh2BG333800 Rh2CG312000 Rh2DG352000 Rh5AG068800 Rh5BG065500 Rh5CG076700 Rh5DG064500
rosa_wichuraiana	Rw2G026350 Rw5G006440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	210
Acc16I	TGCGCA	1 cut(s)	713
AccI	GTMKAC	1 cut(s)	484
AciI	CCGC	6 cut(s)	73, 79, 466, 1059, 1477, 1498
AclWI	GGATC	3 cut(s)	497, 699, 1388
AcsI	RAATTY	3 cut(s)	302, 972, 1416
AcuI	CTGAAG	3 cut(s)	810, 852, 867
AcyI	GRCGYC	1 cut(s)	207
AdeI	CACNNNGTG	1 cut(s)	476
AfaI	GTAC	3 cut(s)	309, 315, 342
AfiI	CCNNNNNNNGG	2 cut(s)	486, 583
AgsI	TTSAA	2 cut(s)	776, 921
AhlI	ACTAGT	1 cut(s)	800
AjuI	GAANNNNNNNTTGG	2 cut(s)	551, 583
AleI	CACNNNNGTG	1 cut(s)	1245
AluBI	AGCT	3 cut(s)	650, 830, 996
AluI	AGCT	3 cut(s)	650, 830, 996
Alw21I	GWGCWC	2 cut(s)	998, 1030
Alw26I	GTCTC	5 cut(s)	135, 362, 655, 734, 832
AlwI	GGATC	3 cut(s)	497, 699, 1388
Ama87I	CYCGRG	1 cut(s)	359
AoxI	GGCC	3 cut(s)	854, 1015, 1220
ApeKI	GCWGC	4 cut(s)	133, 1065, 1198, 1201
ApoI	RAATTY	3 cut(s)	302, 972, 1416
AspLEI	GCGC	1 cut(s)	714
AspS9I	GGNCC	2 cut(s)	1015, 1474
AsuC2I	CCSGG	2 cut(s)	981, 1019
AsuHPI	GGTGA	5 cut(s)	28, 59, 969, 1199, 1337
AvaI	CYCGRG	1 cut(s)	359
AvaII	GGWCC	1 cut(s)	1474
BaeGI	GKGCMC	2 cut(s)	458, 815
BanII	GRGCYC	1 cut(s)	998
BbsI	GAAGAC	3 cut(s)	380, 783, 877
Bbv12I	GWGCWC	2 cut(s)	998, 1030
BbvI	GCAGC	4 cut(s)	145, 1077, 1210, 1213
BccI	CCATC	2 cut(s)	283, 1357
BceAI	ACGGC	1 cut(s)	878
BclI	TGATCA	1 cut(s)	1342
BcnI	CCSGG	2 cut(s)	981, 1019
BcoDI	GTCTC	5 cut(s)	135, 362, 655, 734, 832
BcuI	ACTAGT	1 cut(s)	800
BfaI	CTAG	3 cut(s)	801, 1487, 1510
BfmI	CTRYAG	1 cut(s)	1216
BglI	GCCNNNNNGGC	1 cut(s)	862
BglII	AGATCT	1 cut(s)	1506
BisI	GCNGC	5 cut(s)	134, 466, 1066, 1199, 1202
BlsI	GCNGC	5 cut(s)	135, 467, 1067, 1200, 1203
Bme1390I	CCNGG	2 cut(s)	981, 1019
Bme18I	GGWCC	1 cut(s)	1474
BmeT110I	CYCGRG	1 cut(s)	359
BmgT120I	GGNCC	2 cut(s)	1015, 1474
BmiI	GGNNCC	3 cut(s)	1016, 1121, 1475
BmrFI	CCNGG	2 cut(s)	981, 1019
BmsI	GCATC	6 cut(s)	429, 505, 623, 679, 920, 1172
BpiI	GAAGAC	3 cut(s)	380, 783, 877
BplI	GAGNNNNNCTC	4 cut(s)	1024, 1056, 1283, 1315
BpuEI	CTTGAG	2 cut(s)	735, 1109
BpuMI	CCSGG	2 cut(s)	981, 1019
BsaBI	GATNNNNATC	2 cut(s)	886, 1152
BsaHI	GRCGYC	1 cut(s)	207
BsaI	GGTCTC	1 cut(s)	734
BsaJI	CCNNGG	2 cut(s)	766, 1018
BsaXI	ACNNNNNCTCC	2 cut(s)	132, 162
Bsc4I	CCNNNNNNNGG	2 cut(s)	486, 583
Bse1I	ACTGG	3 cut(s)	324, 480, 1467
Bse3DI	GCAATG	1 cut(s)	1050
Bse8I	GATNNNNATC	2 cut(s)	886, 1152
BseDI	CCNNGG	2 cut(s)	766, 1018
BseGI	GGATG	3 cut(s)	275, 793, 935
BseJI	GATNNNNATC	2 cut(s)	886, 1152
BseLI	CCNNNNNNNGG	2 cut(s)	486, 583
BseMI	GCAATG	1 cut(s)	1050
BseMII	CTCAG	2 cut(s)	908, 1314
BseNI	ACTGG	3 cut(s)	324, 480, 1467
BseRI	GAGGAG	4 cut(s)	188, 191, 194, 599
BseSI	GKGCMC	2 cut(s)	458, 815
BseXI	GCAGC	4 cut(s)	145, 1077, 1210, 1213
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	3 cut(s)	856, 1017, 1222
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	2 cut(s)	998, 1030
BsiHKCI	CYCGRG	1 cut(s)	359
BsiSI	CCGG	3 cut(s)	26, 980, 1018
BslFI	GGGAC	1 cut(s)	1487
BslI	CCNNNNNNNGG	2 cut(s)	486, 583
BsmAI	GTCTC	5 cut(s)	135, 362, 655, 734, 832
BsmBI	CGTCTC	2 cut(s)	135, 655
BsmFI	GGGAC	1 cut(s)	1487
BsmI	GAATGC	2 cut(s)	398, 422
BsnI	GGCC	3 cut(s)	856, 1017, 1222
Bso31I	GGTCTC	1 cut(s)	734
BsoBI	CYCGRG	1 cut(s)	359
Bsp1286I	GDGCHC	4 cut(s)	458, 815, 998, 1030
Bsp1407I	TGTACA	2 cut(s)	313, 340
Bsp143I	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
BspACI	CCGC	6 cut(s)	73, 79, 466, 1059, 1477, 1498
BspANI	GGCC	3 cut(s)	856, 1017, 1222
BspCNI	CTCAG	2 cut(s)	907, 1313
BspLI	GGNNCC	3 cut(s)	1016, 1121, 1475
BspPI	GGATC	3 cut(s)	497, 699, 1388
BspTNI	GGTCTC	1 cut(s)	734
BsrDI	GCAATG	1 cut(s)	1050
BsrGI	TGTACA	2 cut(s)	313, 340
BsrI	ACTGG	3 cut(s)	324, 480, 1467
BssECI	CCNNGG	2 cut(s)	766, 1018
BssMI	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
BssNI	GRCGYC	1 cut(s)	207
BssT1I	CCWWGG	1 cut(s)	766
Bst4CI	ACNGT	3 cut(s)	385, 476, 489
Bst6I	CTCTTC	2 cut(s)	576, 828
BstACI	GRCGYC	1 cut(s)	207
BstAPI	GCANNNNNTGC	3 cut(s)	417, 620, 1420
BstAUI	TGTACA	2 cut(s)	313, 340
BstC8I	GCNNGC	6 cut(s)	6, 463, 1008, 1057, 1278, 1425
BstDEI	CTNAG	3 cut(s)	866, 894, 1300
BstF5I	GGATG	3 cut(s)	275, 793, 935
BstHHI	GCGC	1 cut(s)	714
BstKTI	GATC	8 cut(s)	244, 505, 707, 890, 1345, 1369, 1396, 1509
BstMAI	GTCTC	5 cut(s)	135, 362, 655, 734, 832
BstMBI	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
BstMCI	CGRYCG	1 cut(s)	244
BstSCI	CCNGG	2 cut(s)	979, 1017
BstSFI	CTRYAG	1 cut(s)	1216
BstSLI	GKGCMC	2 cut(s)	458, 815
BstV1I	GCAGC	4 cut(s)	145, 1077, 1210, 1213
BstV2I	GAAGAC	3 cut(s)	380, 783, 877
BstX2I	RGATCY	2 cut(s)	704, 1506
BstYI	RGATCY	2 cut(s)	704, 1506
BsuRI	GGCC	3 cut(s)	856, 1017, 1222
BtsCI	GGATG	3 cut(s)	275, 793, 935
BtsI	GCAGTG	1 cut(s)	343
BtsIMutI	CAGTG	4 cut(s)	343, 472, 756, 933
Cac8I	GCNNGC	6 cut(s)	6, 463, 1008, 1057, 1278, 1425
CfoI	GCGC	1 cut(s)	714
Cfr13I	GGNCC	2 cut(s)	1015, 1474
CseI	GACGC	1 cut(s)	672
Csp6I	GTAC	3 cut(s)	308, 314, 341
CviAII	CATG	5 cut(s)	578, 808, 1046, 1159, 1398
CviQI	GTAC	3 cut(s)	308, 314, 341
DdeI	CTNAG	3 cut(s)	866, 894, 1300
DpnI	GATC	8 cut(s)	243, 504, 706, 889, 1344, 1368, 1395, 1508
DpnII	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
DraIII	CACNNNGTG	1 cut(s)	476
Eam1104I	CTCTTC	2 cut(s)	576, 828
EarI	CTCTTC	2 cut(s)	576, 828
Ecl136II	GAGCTC	1 cut(s)	996
Eco130I	CCWWGG	1 cut(s)	766
Eco24I	GRGCYC	1 cut(s)	998
Eco31I	GGTCTC	1 cut(s)	734
Eco47I	GGWCC	1 cut(s)	1474
Eco53kI	GAGCTC	1 cut(s)	996
Eco57I	CTGAAG	3 cut(s)	810, 852, 867
Eco88I	CYCGRG	1 cut(s)	359
EcoICRI	GAGCTC	1 cut(s)	996
EcoT14I	CCWWGG	1 cut(s)	766
EcoT22I	ATGCAT	2 cut(s)	422, 694
EcoT38I	GRGCYC	1 cut(s)	998
ErhI	CCWWGG	1 cut(s)	766
Esp3I	CGTCTC	2 cut(s)	135, 655
FaeI	CATG	5 cut(s)	581, 811, 1049, 1162, 1401
FalI	AAGNNNNNCTT	1 cut(s)	37
FaqI	GGGAC	1 cut(s)	1487
FatI	CATG	5 cut(s)	577, 807, 1045, 1158, 1397
FbaI	TGATCA	1 cut(s)	1342
FblI	GTMKAC	1 cut(s)	484
Fnu4HI	GCNGC	5 cut(s)	134, 466, 1066, 1199, 1202
FokI	GGATG	3 cut(s)	262, 800, 942
FriOI	GRGCYC	1 cut(s)	998
Fsp4HI	GCNGC	5 cut(s)	134, 466, 1066, 1199, 1202
FspBI	CTAG	3 cut(s)	801, 1487, 1510
FspI	TGCGCA	1 cut(s)	713
GlaI	GCGC	1 cut(s)	713
GluI	GCNGC	5 cut(s)	134, 466, 1066, 1199, 1202
HaeIII	GGCC	3 cut(s)	856, 1017, 1222
HapII	CCGG	3 cut(s)	26, 980, 1018
HgaI	GACGC	1 cut(s)	672
HhaI	GCGC	1 cut(s)	714
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	5 cut(s)	581, 811, 1049, 1162, 1401
Hin6I	GCGC	1 cut(s)	712
HinP1I	GCGC	1 cut(s)	712
HincII	GTYRAC	2 cut(s)	256, 485
HindII	GTYRAC	2 cut(s)	256, 485
HindIII	AAGCTT	1 cut(s)	648
HinfI	GANTC	4 cut(s)	592, 1033, 1373, 1483
HpaII	CCGG	3 cut(s)	26, 980, 1018
HphI	GGTGA	5 cut(s)	28, 59, 969, 1199, 1337
Hpy166II	GTNNAC	3 cut(s)	256, 343, 485
Hpy188I	TCNGA	6 cut(s)	646, 723, 734, 1000, 1032, 1119
Hpy188III	TCNNGA	7 cut(s)	93, 245, 361, 539, 658, 1080, 1370
Hpy8I	GTNNAC	3 cut(s)	256, 343, 485
Hpy99I	CGWCG	7 cut(s)	44, 53, 56, 206, 209, 212, 489
HpyAV	CCTTC	6 cut(s)	553, 729, 834, 909, 1124, 1495
HpyCH4III	ACNGT	3 cut(s)	385, 476, 489
HpyCH4IV	ACGT	2 cut(s)	144, 207
HpyF3I	CTNAG	3 cut(s)	866, 894, 1300
HpySE526I	ACGT	2 cut(s)	144, 207
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	5 cut(s)	581, 811, 1049, 1162, 1401
HspAI	GCGC	1 cut(s)	712
Ksp22I	TGATCA	1 cut(s)	1342
Kzo9I	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
LmnI	GCTCC	1 cut(s)	993
Lsp1109I	GCAGC	4 cut(s)	145, 1077, 1210, 1213
LweI	GCATC	6 cut(s)	429, 505, 623, 679, 920, 1172
MaeI	CTAG	3 cut(s)	801, 1487, 1510
MaeII	ACGT	2 cut(s)	144, 207
MaeIII	GTNAC	3 cut(s)	803, 910, 1034
MalI	GATC	8 cut(s)	243, 504, 706, 889, 1344, 1368, 1395, 1508
MboI	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
MfeI	CAATTG	2 cut(s)	618, 1456
MflI	RGATCY	2 cut(s)	704, 1506
MhlI	GDGCHC	4 cut(s)	458, 815, 998, 1030
MlyI	GAGTC	2 cut(s)	586, 1042
MmeI	TCCRAC	1 cut(s)	658
Mph1103I	ATGCAT	2 cut(s)	422, 694
MseI	TTAA	5 cut(s)	369, 653, 1305, 1358, 1449
MslI	CAYNNNNRTG	1 cut(s)	1245
MspA1I	CMGCKG	1 cut(s)	830
MspI	CCGG	3 cut(s)	26, 980, 1018
MspR9I	CCNGG	2 cut(s)	981, 1019
MunI	CAATTG	2 cut(s)	618, 1456
Mva1269I	GAATGC	2 cut(s)	398, 422
NciI	CCSGG	2 cut(s)	981, 1019
NdeII	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
NlaIII	CATG	5 cut(s)	581, 811, 1049, 1162, 1401
NlaIV	GGNNCC	3 cut(s)	1016, 1121, 1475
NmeAIII	GCCGAG	3 cut(s)	983, 1021, 1248
NmuCI	GTSAC	2 cut(s)	910, 1034
NsbI	TGCGCA	1 cut(s)	713
NsiI	ATGCAT	2 cut(s)	422, 694
OliI	CACNNNNGTG	1 cut(s)	1245
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 207
PctI	GAATGC	2 cut(s)	398, 422
PfeI	GAWTC	2 cut(s)	1373, 1483
PflFI	GACNNNGTC	1 cut(s)	206
PkrI	GCNGC	5 cut(s)	135, 467, 1067, 1200, 1203
Ple19I	CGATCG	1 cut(s)	244
PleI	GAGTC	2 cut(s)	586, 1041
PpsI	GAGTC	2 cut(s)	586, 1041
Psp124BI	GAGCTC	1 cut(s)	998
PspN4I	GGNNCC	3 cut(s)	1016, 1121, 1475
PspPI	GGNCC	2 cut(s)	1015, 1474
PsuI	RGATCY	2 cut(s)	704, 1506
PsyI	GACNNNGTC	1 cut(s)	206
PvuI	CGATCG	1 cut(s)	244
PvuII	CAGCTG	1 cut(s)	830
RsaI	GTAC	3 cut(s)	309, 315, 342
RsaNI	GTAC	3 cut(s)	308, 314, 341
RseI	CAYNNNNRTG	1 cut(s)	1245
SacI	GAGCTC	1 cut(s)	998
SalI	GTCGAC	1 cut(s)	483
SaqAI	TTAA	5 cut(s)	369, 653, 1305, 1358, 1449
SatI	GCNGC	5 cut(s)	134, 466, 1066, 1199, 1202
Sau3AI	GATC	8 cut(s)	241, 502, 704, 887, 1342, 1366, 1393, 1506
Sau96I	GGNCC	2 cut(s)	1015, 1474
SchI	GAGTC	2 cut(s)	586, 1042
ScrFI	CCNGG	2 cut(s)	981, 1019
SduI	GDGCHC	4 cut(s)	458, 815, 998, 1030
SfaNI	GCATC	6 cut(s)	429, 505, 623, 679, 920, 1172
SfcI	CTRYAG	1 cut(s)	1216
SinI	GGWCC	1 cut(s)	1474
SmiMI	CAYNNNNRTG	1 cut(s)	1245
SmlI	CTYRAG	2 cut(s)	750, 1124
SmoI	CTYRAG	2 cut(s)	750, 1124
SpeI	ACTAGT	1 cut(s)	800
SsiI	CCGC	6 cut(s)	73, 79, 466, 1059, 1477, 1498
SspI	AATATT	1 cut(s)	630
SspMI	CTAG	3 cut(s)	801, 1487, 1510
SstI	GAGCTC	1 cut(s)	998
StyD4I	CCNGG	2 cut(s)	979, 1017
StyI	CCWWGG	1 cut(s)	766
TaaI	ACNGT	3 cut(s)	385, 476, 489
TaiI	ACGT	2 cut(s)	147, 210
TaqI	TCGA	8 cut(s)	94, 210, 244, 423, 484, 595, 886, 1081
TatI	WGTACW	3 cut(s)	307, 313, 340
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	2 cut(s)	1373, 1483
Tru1I	TTAA	5 cut(s)	369, 653, 1305, 1358, 1449
Tru9I	TTAA	5 cut(s)	369, 653, 1305, 1358, 1449
TscAI	CASTG	4 cut(s)	350, 479, 763, 940
TseFI	GTSAC	2 cut(s)	910, 1034
TseI	GCWGC	4 cut(s)	133, 1065, 1198, 1201
Tsp45I	GTSAC	2 cut(s)	910, 1034
TspDTI	ATGAA	8 cut(s)	120, 204, 264, 594, 804, 891, 1142, 1376
TspGWI	ACGGA	3 cut(s)	282, 394, 889
TspRI	CASTG	4 cut(s)	350, 479, 763, 940
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	1 cut(s)	1474
XapI	RAATTY	3 cut(s)	302, 972, 1416
XmiI	GTMKAC	1 cut(s)	484
XspI	CTAG	3 cut(s)	801, 1487, 1510
ZraI	GACGTC	1 cut(s)	208
Zsp2I	ATGCAT	2 cut(s)	422, 694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.