Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001286

Physical Location & Seq

Genomic Coordinates Forward (+)

20273282 .. 20280479

Gene Structure 7198 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g26540.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGCCTGCCCAGAAGCGTTCTTCGCCGGAAAATCTCACCGACGACGACGACGACGACCCCTCACGTCACCACCGCCACCGCCCCAAGCAATCTCGTCCGCCTGATGAACCACTACTACAGCAGCAGCAACAAGAAGAACAAGGAGACGTAGCAGCTGAACAACAGCAGCAAGAAGACGAAGAAGAAGAAGAGGCGGTGGAGGAAGATGGCGAAGCAAACGACGACGAAGAAGAAGAAGAAGATGAAGCTTACGATTGTGACGGAAGCCCATCCCAAGAAAAGCCCGAATTTGTACTTGTCCAACTGCCGGATATTCGTAAAGATGTACACTGTCCAATATGTCTTGGGATTATTAAGAAGACACGGACTGTAATGGAATGCCTACACAGGTTTTGCAGGGAATGCATCGACAAATCAATGAGAATGGGCTTGTTACATAATTTCAGGAACAATGAGTGTCCTGCTTGCCGAACACACTGTGCCAGTCGACGGTCTTTGAGAGATGATCCAAATTATGATGCCTTAATTGCAACATTATATCCAGATATTGAGAAATATGAGGAGGAGGAATTGGCTTTCCATGAAGAGGAGAGGACTCGAAATGAGCAGATACAAGCATCAATTGCCCAAATATTTCAACGACAATCAGAAGCTCTAATCAAGAGACGCTCACTTGGCAAAGATACCCAAGATGGATTTAATATGAGACCACAGCGCAATAGTCGGAGTGCTTTCCAAAGGAGAAGGAACTCTCGAGCCACTGAACTCCGAGGGTTTGAAGACAATGAAGATGAAATTGACAAATCACCTCCTGCTGAAGAGAGATATACTGAAGTGAGGCCAAGACGGCTAAGGAGAAGGACAGGATTTCGATCATCTCAGCCTTCATCATCTGTGACCAATTCAAATGCAGGATGCACTGAAAATGATTTAGAAGTGAGCAGAGACAGCAGGGGAATTTCTCCTGGTCTTGTGTGGAGCTCTGAAATGCTTGCTTGGGGCCGGGGTGGTGCTCGGAGTCACACCCGGCATGGCGTTGCAAGTGGTTGCAGCAATAAGAGTTCTCGAAGCGCTCGCTTATCAAAGCTGGTTGATTACCTTCGAAGCCTCAAGGAAAACAATGATGAGTTAGATGTTCATCTCATGCTTATTTCTTTGGATAAAAGATGCACACCAAACTTGCAGCAGCCTCACCTTTGCTGTAGGCCGAGTTTGTCAGTCAAGCACCTTCGCGAATATGTTGCTTGTCAAACACCTCTGCAAGCTGAAGAAGTTGAGTTGTTCTCAGTTAAAGGGCACCACAATTCCAATGACGATAAATTGACTGATCACCCATCACCGTTAATGAATGATCTAGATTCTGTACCCCTTTTGCTTGATCCATGCCAATATGATTTGCAAATTCTGCAAGCAGAAGAAACTCTGGCAGGGATTAAAGCCAATTGCACTTCCAGTAGGGACCGTTTGATTCTAGCATACAGGCGGAAGGAGATCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0001709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0032501 GO:0032502 GO:0032991 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045165 GO:0045814 GO:0045892 GO:0045934 GO:0048507 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

500

Amino Acids

57.39

Weight (kDa)

5.22

Isoelectric Point (pI)

86.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4	PF00097	1 - 26	6.2e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	2 - 26	1.8e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44280 AT5G44280 AT5G44280
fragaria_vesca	FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540
malus_domestica	MD05G1312000.v1.1 MD09G1244000.v1.1 MD10G1291500.v1.1 MD17G1235900.v1.1
prunus_persica	Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1
pyrus_communis	pycom05g28800 pycom09g16250 pycom10g24370
rosa_chinensis	RchiOBHm_Chr2g0127611 RchiOBHm_Chr5g0008911
rosa_laevigata	RLG00000018950 RLG00000031615
rosa_multiflora	Rmu_co8349609.1_g000001 Rmu_sc0004677.1_g000011 Rmu_ssc0000200.1_g000019
rosa_roxburghii	Rroxscaffold_1G00067100 Rroxscaffold_1G00067720 Rroxscaffold_2G00116570
rosa_rugosa	Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug04G0440100
rosa_samantha	Rh2AG324500 Rh2BG333800 Rh2CG312000 Rh2DG352000 Rh5AG068800 Rh5BG065500 Rh5CG076700 Rh5DG064500
rosa_wichuraiana	Rw2G026350 Rw5G006440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1296
AccI	GTMKAC	1 cut(s)	487
AccII	CGCG	1 cut(s)	1233
AciI	CCGC	5 cut(s)	73, 79, 98, 194, 1483
AclWI	GGATC	2 cut(s)	500, 1373
AcsI	RAATTY	3 cut(s)	287, 957, 1401
AcuI	CTGAAG	3 cut(s)	837, 852, 1287
AdeI	CACNNNGTG	1 cut(s)	479
AfaI	GTAC	3 cut(s)	294, 327, 1365
AfeI	AGCGCT	1 cut(s)	1072
AfiI	CCNNNNNNNGG	3 cut(s)	307, 489, 586
AgsI	TTSAA	3 cut(s)	638, 779, 906
AjiI	CACGTC	1 cut(s)	65
AjnI	CCWGG	1 cut(s)	964
AluBI	AGCT	6 cut(s)	155, 248, 653, 981, 1087, 1265
AluI	AGCT	6 cut(s)	155, 248, 653, 981, 1087, 1265
Alw21I	GWGCWC	2 cut(s)	983, 1015
Alw26I	GTCTC	4 cut(s)	138, 658, 700, 939
AlwI	GGATC	2 cut(s)	500, 1373
Ama87I	CYCGRG	1 cut(s)	753
Aor51HI	AGCGCT	1 cut(s)	1072
AoxI	GGCC	3 cut(s)	839, 1000, 1205
ApeKI	GCWGC	7 cut(s)	121, 124, 152, 166, 1050, 1183, 1186
ApoI	RAATTY	3 cut(s)	287, 957, 1401
AspLEI	GCGC	2 cut(s)	717, 1073
AspS9I	GGNCC	2 cut(s)	1000, 1459
AsuC2I	CCSGG	2 cut(s)	1004, 1027
AsuHPI	GGTGA	6 cut(s)	28, 59, 798, 1184, 1322, 1329
AsuII	TTCGAA	1 cut(s)	1102
AvaI	CYCGRG	1 cut(s)	753
AvaII	GGWCC	1 cut(s)	1459
BaeGI	GKGCMC	1 cut(s)	1299
BanI	GGYRCC	1 cut(s)	1296
BanII	GRGCYC	1 cut(s)	983
BbsI	GAAGAC	3 cut(s)	180, 365, 786
Bbv12I	GWGCWC	2 cut(s)	983, 1015
BbvI	GCAGC	7 cut(s)	133, 136, 164, 178, 1062, 1195, 1198
BccI	CCATC	4 cut(s)	200, 277, 686, 1342
BceAI	ACGGC	1 cut(s)	863
BcgI	CGANNNNNNTGC	2 cut(s)	1223, 1257
BciT130I	CCWGG	1 cut(s)	966
BclI	TGATCA	1 cut(s)	1327
BcnI	CCSGG	2 cut(s)	1004, 1027
BcoDI	GTCTC	4 cut(s)	138, 658, 700, 939
BfaI	CTAG	2 cut(s)	1355, 1472
BfmI	CTRYAG	2 cut(s)	116, 1201
BfoI	RGCGCY	1 cut(s)	1074
BglI	GCCNNNNNGGC	1 cut(s)	847
BisI	GCNGC	7 cut(s)	122, 125, 153, 167, 1051, 1184, 1187
BlsI	GCNGC	7 cut(s)	123, 126, 154, 168, 1052, 1185, 1188
Bme1390I	CCNGG	3 cut(s)	966, 1004, 1027
Bme18I	GGWCC	1 cut(s)	1459
BmeT110I	CYCGRG	1 cut(s)	753
BmgBI	CACGTC	1 cut(s)	65
BmgT120I	GGNCC	2 cut(s)	1000, 1459
BmiI	GGNNCC	3 cut(s)	1001, 1298, 1460
BmrFI	CCNGG	3 cut(s)	966, 1004, 1027
BmsI	GCATC	5 cut(s)	414, 508, 626, 905, 1157
BpiI	GAAGAC	3 cut(s)	180, 365, 786
BplI	GAGNNNNNCTC	2 cut(s)	1268, 1300
Bpu10I	CCTNAGC	1 cut(s)	851
Bpu14I	TTCGAA	1 cut(s)	1102
BpuEI	CTTGAG	1 cut(s)	1094
BpuMI	CCSGG	2 cut(s)	1004, 1027
BsaBI	GATNNNNATC	2 cut(s)	871, 1137
BsaI	GGTCTC	1 cut(s)	700
BsaJI	CCNNGG	2 cut(s)	769, 1003
BsaXI	ACNNNNNCTCC	1 cut(s)	1481
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 489, 586
Bse1I	ACTGG	2 cut(s)	483, 1452
Bse8I	GATNNNNATC	2 cut(s)	871, 1137
BseBI	CCWGG	1 cut(s)	966
BseDI	CCNNGG	2 cut(s)	769, 1003
BseGI	GGATG	2 cut(s)	269, 920
BseJI	GATNNNNATC	2 cut(s)	871, 1137
BseLI	CCNNNNNNNGG	3 cut(s)	307, 489, 586
BseMII	CTCAG	2 cut(s)	893, 1299
BseNI	ACTGG	2 cut(s)	483, 1452
BseRI	GAGGAG	3 cut(s)	575, 578, 602
BseSI	GKGCMC	1 cut(s)	1299
BseXI	GCAGC	7 cut(s)	133, 136, 164, 178, 1062, 1195, 1198
Bsh1236I	CGCG	1 cut(s)	1233
BshFI	GGCC	3 cut(s)	841, 1002, 1207
BshNI	GGYRCC	1 cut(s)	1296
BsiHKAI	GWGCWC	2 cut(s)	983, 1015
BsiHKCI	CYCGRG	1 cut(s)	753
BsiSI	CCGG	4 cut(s)	26, 308, 1003, 1027
BslFI	GGGAC	1 cut(s)	1472
BslI	CCNNNNNNNGG	3 cut(s)	307, 489, 586
BsmAI	GTCTC	4 cut(s)	138, 658, 700, 939
BsmBI	CGTCTC	2 cut(s)	138, 658
BsmFI	GGGAC	1 cut(s)	1472
BsmI	GAATGC	2 cut(s)	383, 407
BsnI	GGCC	3 cut(s)	841, 1002, 1207
Bso31I	GGTCTC	1 cut(s)	700
BsoBI	CYCGRG	1 cut(s)	753
Bsp119I	TTCGAA	1 cut(s)	1102
Bsp1286I	GDGCHC	3 cut(s)	983, 1015, 1299
Bsp1407I	TGTACA	1 cut(s)	325
Bsp143I	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
Bsp68I	TCGCGA	1 cut(s)	1233
BspACI	CCGC	5 cut(s)	73, 79, 98, 194, 1483
BspANI	GGCC	3 cut(s)	841, 1002, 1207
BspCNI	CTCAG	2 cut(s)	892, 1298
BspFNI	CGCG	1 cut(s)	1233
BspLI	GGNNCC	3 cut(s)	1001, 1298, 1460
BspPI	GGATC	2 cut(s)	500, 1373
BspT104I	TTCGAA	1 cut(s)	1102
BspT107I	GGYRCC	1 cut(s)	1296
BspTNI	GGTCTC	1 cut(s)	700
BsrGI	TGTACA	1 cut(s)	325
BsrI	ACTGG	2 cut(s)	483, 1452
BssECI	CCNNGG	2 cut(s)	769, 1003
BssMI	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
Bst2UI	CCWGG	1 cut(s)	966
Bst4CI	ACNGT	6 cut(s)	332, 370, 479, 492, 1341, 1463
Bst6I	CTCTTC	3 cut(s)	183, 579, 813
BstAPI	GCANNNNNTGC	3 cut(s)	402, 623, 1405
BstAUI	TGTACA	1 cut(s)	325
BstBI	TTCGAA	1 cut(s)	1102
BstC8I	GCNNGC	6 cut(s)	6, 466, 993, 1075, 1263, 1410
BstDEI	CTNAG	3 cut(s)	851, 879, 1285
BstF5I	GGATG	2 cut(s)	269, 920
BstFNI	CGCG	1 cut(s)	1233
BstH2I	RGCGCY	1 cut(s)	1074
BstHHI	GCGC	2 cut(s)	717, 1073
BstKTI	GATC	6 cut(s)	508, 875, 1330, 1354, 1381, 1494
BstMAI	GTCTC	4 cut(s)	138, 658, 700, 939
BstMBI	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 402, 527, 623, 675, 847, 948, 1405
BstNI	CCWGG	1 cut(s)	966
BstSCI	CCNGG	3 cut(s)	964, 1002, 1025
BstSFI	CTRYAG	2 cut(s)	116, 1201
BstSLI	GKGCMC	1 cut(s)	1299
BstUI	CGCG	1 cut(s)	1233
BstV1I	GCAGC	7 cut(s)	133, 136, 164, 178, 1062, 1195, 1198
BstV2I	GAAGAC	3 cut(s)	180, 365, 786
BsuRI	GGCC	3 cut(s)	841, 1002, 1207
BtrI	CACGTC	1 cut(s)	65
BtsCI	GGATG	2 cut(s)	269, 920
BtsIMutI	CAGTG	4 cut(s)	328, 475, 759, 918
BtuMI	TCGCGA	1 cut(s)	1233
Cac8I	GCNNGC	6 cut(s)	6, 466, 993, 1075, 1263, 1410
CfoI	GCGC	2 cut(s)	717, 1073
Cfr13I	GGNCC	2 cut(s)	1000, 1459
CseI	GACGC	1 cut(s)	675
Csp6I	GTAC	3 cut(s)	293, 326, 1364
CviAII	CATG	5 cut(s)	581, 1031, 1144, 1383, 1495
CviQI	GTAC	3 cut(s)	293, 326, 1364
DdeI	CTNAG	3 cut(s)	851, 879, 1285
DpnI	GATC	6 cut(s)	507, 874, 1329, 1353, 1380, 1493
DpnII	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
DraIII	CACNNNGTG	1 cut(s)	479
Eam1104I	CTCTTC	3 cut(s)	183, 579, 813
EarI	CTCTTC	3 cut(s)	183, 579, 813
EciI	GGCGGA	2 cut(s)	87, 1498
Ecl136II	GAGCTC	1 cut(s)	981
Eco24I	GRGCYC	1 cut(s)	983
Eco31I	GGTCTC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	1459
Eco47III	AGCGCT	1 cut(s)	1072
Eco53kI	GAGCTC	1 cut(s)	981
Eco57I	CTGAAG	3 cut(s)	837, 852, 1287
Eco88I	CYCGRG	1 cut(s)	753
EcoICRI	GAGCTC	1 cut(s)	981
EcoRII	CCWGG	1 cut(s)	964
EcoT22I	ATGCAT	1 cut(s)	407
EcoT38I	GRGCYC	1 cut(s)	983
Esp3I	CGTCTC	2 cut(s)	138, 658
FaeI	CATG	5 cut(s)	584, 1034, 1147, 1386, 1498
FaqI	GGGAC	1 cut(s)	1472
FatI	CATG	5 cut(s)	580, 1030, 1143, 1382, 1494
FbaI	TGATCA	1 cut(s)	1327
FblI	GTMKAC	1 cut(s)	487
Fnu4HI	GCNGC	7 cut(s)	122, 125, 153, 167, 1051, 1184, 1187
FokI	GGATG	2 cut(s)	256, 927
FriOI	GRGCYC	1 cut(s)	983
Fsp4HI	GCNGC	7 cut(s)	122, 125, 153, 167, 1051, 1184, 1187
FspBI	CTAG	2 cut(s)	1355, 1472
GlaI	GCGC	2 cut(s)	716, 1072
GluI	GCNGC	7 cut(s)	122, 125, 153, 167, 1051, 1184, 1187
HaeII	RGCGCY	1 cut(s)	1074
HaeIII	GGCC	3 cut(s)	841, 1002, 1207
HapII	CCGG	4 cut(s)	26, 308, 1003, 1027
HgaI	GACGC	1 cut(s)	675
HhaI	GCGC	2 cut(s)	717, 1073
Hin1II	CATG	5 cut(s)	584, 1034, 1147, 1386, 1498
Hin6I	GCGC	2 cut(s)	715, 1071
HinP1I	GCGC	2 cut(s)	715, 1071
HincII	GTYRAC	1 cut(s)	488
HindII	GTYRAC	1 cut(s)	488
HindIII	AAGCTT	1 cut(s)	246
HinfI	GANTC	4 cut(s)	595, 1018, 1358, 1468
HpaII	CCGG	4 cut(s)	26, 308, 1003, 1027
HphI	GGTGA	6 cut(s)	28, 59, 798, 1184, 1322, 1329
Hpy166II	GTNNAC	2 cut(s)	328, 488
Hpy188I	TCNGA	5 cut(s)	649, 726, 770, 985, 1017
Hpy188III	TCNNGA	7 cut(s)	445, 542, 661, 753, 1065, 1232, 1355
Hpy8I	GTNNAC	2 cut(s)	328, 488
Hpy99I	CGWCG	8 cut(s)	44, 47, 50, 53, 56, 224, 227, 492
HpyAV	CCTTC	6 cut(s)	738, 852, 894, 1109, 1238, 1480
HpyCH4III	ACNGT	6 cut(s)	332, 370, 479, 492, 1341, 1463
HpyCH4IV	ACGT	2 cut(s)	64, 147
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 402, 527, 623, 675, 847, 948, 1405
HpyF3I	CTNAG	3 cut(s)	851, 879, 1285
HpySE526I	ACGT	2 cut(s)	64, 147
Hsp92II	CATG	5 cut(s)	584, 1034, 1147, 1386, 1498
HspAI	GCGC	2 cut(s)	715, 1071
Ksp22I	TGATCA	1 cut(s)	1327
Kzo9I	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
LmnI	GCTCC	1 cut(s)	978
Lsp1109I	GCAGC	7 cut(s)	133, 136, 164, 178, 1062, 1195, 1198
LweI	GCATC	5 cut(s)	414, 508, 626, 905, 1157
MaeI	CTAG	2 cut(s)	1355, 1472
MaeII	ACGT	2 cut(s)	64, 147
MaeIII	GTNAC	5 cut(s)	65, 257, 432, 895, 1019
MalI	GATC	6 cut(s)	507, 874, 1329, 1353, 1380, 1493
MboI	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
MfeI	CAATTG	2 cut(s)	621, 1441
MhlI	GDGCHC	3 cut(s)	983, 1015, 1299
MlyI	GAGTC	2 cut(s)	589, 1027
MmeI	TCCRAC	2 cut(s)	325, 704
Mph1103I	ATGCAT	1 cut(s)	407
MseI	TTAA	6 cut(s)	354, 524, 699, 1290, 1343, 1434
MspA1I	CMGCKG	1 cut(s)	155
MspI	CCGG	4 cut(s)	26, 308, 1003, 1027
MspR9I	CCNGG	3 cut(s)	966, 1004, 1027
MunI	CAATTG	2 cut(s)	621, 1441
Mva1269I	GAATGC	2 cut(s)	383, 407
MvaI	CCWGG	1 cut(s)	966
MvnI	CGCG	1 cut(s)	1233
MwoI	GCNNNNNNNGC	8 cut(s)	22, 402, 527, 623, 675, 847, 948, 1405
NciI	CCSGG	2 cut(s)	1004, 1027
NdeII	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
NlaIII	CATG	5 cut(s)	584, 1034, 1147, 1386, 1498
NlaIV	GGNNCC	3 cut(s)	1001, 1298, 1460
NmeAIII	GCCGAG	1 cut(s)	1233
NmuCI	GTSAC	4 cut(s)	65, 257, 895, 1019
NruI	TCGCGA	1 cut(s)	1233
NsiI	ATGCAT	1 cut(s)	407
NspV	TTCGAA	1 cut(s)	1102
PaeR7I	CTCGAG	1 cut(s)	753
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 51
PctI	GAATGC	2 cut(s)	383, 407
PfeI	GAWTC	2 cut(s)	1358, 1468
PkrI	GCNGC	7 cut(s)	123, 126, 154, 168, 1052, 1185, 1188
PleI	GAGTC	2 cut(s)	589, 1026
PpsI	GAGTC	2 cut(s)	589, 1026
Psp124BI	GAGCTC	1 cut(s)	983
Psp6I	CCWGG	1 cut(s)	964
PspGI	CCWGG	1 cut(s)	964
PspN4I	GGNNCC	3 cut(s)	1001, 1298, 1460
PspPI	GGNCC	2 cut(s)	1000, 1459
PsrI	GAACNNNNNNTAC	2 cut(s)	99, 131
PvuII	CAGCTG	1 cut(s)	155
RruI	TCGCGA	1 cut(s)	1233
RsaI	GTAC	3 cut(s)	294, 327, 1365
RsaNI	GTAC	3 cut(s)	293, 326, 1364
SacI	GAGCTC	1 cut(s)	983
SalI	GTCGAC	1 cut(s)	486
SaqAI	TTAA	6 cut(s)	354, 524, 699, 1290, 1343, 1434
SatI	GCNGC	7 cut(s)	122, 125, 153, 167, 1051, 1184, 1187
Sau3AI	GATC	6 cut(s)	505, 872, 1327, 1351, 1378, 1491
Sau96I	GGNCC	2 cut(s)	1000, 1459
SchI	GAGTC	2 cut(s)	589, 1027
ScrFI	CCNGG	3 cut(s)	966, 1004, 1027
SduI	GDGCHC	3 cut(s)	983, 1015, 1299
SfaNI	GCATC	5 cut(s)	414, 508, 626, 905, 1157
SfcI	CTRYAG	2 cut(s)	116, 1201
Sfr274I	CTCGAG	1 cut(s)	753
SfuI	TTCGAA	1 cut(s)	1102
SinI	GGWCC	1 cut(s)	1459
SlaI	CTCGAG	1 cut(s)	753
SmlI	CTYRAG	2 cut(s)	753, 1109
SmoI	CTYRAG	2 cut(s)	753, 1109
SsiI	CCGC	5 cut(s)	73, 79, 98, 194, 1483
SspI	AATATT	1 cut(s)	633
SspMI	CTAG	2 cut(s)	1355, 1472
SstI	GAGCTC	1 cut(s)	983
StyD4I	CCNGG	3 cut(s)	964, 1002, 1025
TaaI	ACNGT	6 cut(s)	332, 370, 479, 492, 1341, 1463
TaiI	ACGT	2 cut(s)	67, 150
TaqI	TCGA	7 cut(s)	408, 487, 598, 754, 871, 1066, 1102
TatI	WGTACW	2 cut(s)	292, 325
TfiI	GAWTC	2 cut(s)	1358, 1468
Tru1I	TTAA	6 cut(s)	354, 524, 699, 1290, 1343, 1434
Tru9I	TTAA	6 cut(s)	354, 524, 699, 1290, 1343, 1434
TscAI	CASTG	4 cut(s)	335, 482, 766, 925
TseFI	GTSAC	4 cut(s)	65, 257, 895, 1019
TseI	GCWGC	7 cut(s)	121, 124, 152, 166, 1050, 1183, 1186
Tsp45I	GTSAC	4 cut(s)	65, 257, 895, 1019
TspDTI	ATGAA	8 cut(s)	120, 258, 597, 801, 807, 876, 1127, 1361
TspGWI	ACGGA	2 cut(s)	276, 379
TspRI	CASTG	4 cut(s)	335, 482, 766, 925
VpaK11BI	GGWCC	1 cut(s)	1459
XapI	RAATTY	3 cut(s)	287, 957, 1401
XbaI	TCTAGA	1 cut(s)	1354
XhoI	CTCGAG	1 cut(s)	753
XmiI	GTMKAC	1 cut(s)	487
XspI	CTAG	2 cut(s)	1355, 1472
Zsp2I	ATGCAT	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.