Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001286

Physical Location & Seq

Genomic Coordinates Reverse (-)

59702747 .. 59705217

Gene Structure 2471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0440100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGTCTCGCACGTGCTCTCAGTGCGGGAACAACGGCCACAACTCTCGCACATGCACGGAGGCCACCGGCGGTGGCGCCGCCCCCGCAGAAAACGGCATCATGCTCTTCGGCGTGAGACTGGTCACCGAGCAGGGAAATGCCTTCAGGAAGAGTGCTAGTATGAACAATCTCTCCCAGTACGACCAGCTGCCTCTTCATGACTCCAACCCCGACGCCGGCTATGCCTCCGACGACGTCGTTCACGCTTCTGGCAACCGCCGCGAGCGCAAGAGAGGTGTTGCGTGGACGGAGGAGGAGCACAGGCTGTTCTTGTTGGGTTTGCAGAAGGTAGGAAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTGAAGACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTTCTCAGGCGGAACAACCATAACCGTAGACGCCGTAGATCTAGTCTCTTTGATATCACCACCGATACTCCGTCCATGAATTCATTAATGGAAGAAGATCTAGCCCTGCACCATGAAAATAGTGCACAACTATCACTACCGGTACTGCCATATCCTCCACCGCAGTCGACCAGTTTAAGTGGCAATCTTATCGGCGGGTTTCCAATCTCAACCTTTCCTATGGCACTGTCTCCGGTGGTCCTACCTGTCACCGGCGAGAGCTCATCGTCAGCCGAGAGTCTAGCATTATTAGGAGGAGCACCAAATCCATCCAATGACGTGCAGCAGATGGCAAAAGTCCCACCAACGACGAGAAAGCTCGTCCGTCCGATTCCGGTCCATCCGGTTCCTCCGTCAGCAAAAATGGCTGAGCTCAACTTGAATCACAAGTATTCACCTAGCAGAGTAGCACCAGAGCCATTGCCTTTGTCACTAAAGCTCTCCAACACGACGTCGTCGGAAGAACAGTCTCCGACGGCTTCGAGTCACTCGTCTGCTTTTCAGGCCATGTCTAGTGGCACTGATAGCATCATCAGTGTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0001709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0032501 GO:0032502 GO:0032991 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045165 GO:0045814 GO:0045892 GO:0045934 GO:0048507 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

332

Amino Acids

35.84

Weight (kDa)

9.34

Isoelectric Point (pI)

68.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	94 - 139	6.5e-11	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44280 AT5G44280 AT5G44280
fragaria_vesca	FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540
malus_domestica	MD05G1312000.v1.1 MD09G1244000.v1.1 MD10G1291500.v1.1 MD17G1235900.v1.1
prunus_persica	Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1
pyrus_communis	pycom05g28800 pycom09g16250 pycom10g24370
rosa_chinensis	RchiOBHm_Chr2g0127611 RchiOBHm_Chr5g0008911
rosa_laevigata	RLG00000018950 RLG00000031615
rosa_multiflora	Rmu_co8349609.1_g000001 Rmu_sc0004677.1_g000011 Rmu_ssc0000200.1_g000019
rosa_roxburghii	Rroxscaffold_1G00067100 Rroxscaffold_1G00067720 Rroxscaffold_2G00116570
rosa_rugosa	Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug04G0440100
rosa_samantha	Rh2AG324500 Rh2BG333800 Rh2CG312000 Rh2DG352000 Rh5AG068800 Rh5BG065500 Rh5CG076700 Rh5DG064500
rosa_wichuraiana	Rw2G026350 Rw5G006440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	237, 908
AccB1I	GGYRCC	1 cut(s)	74
AccI	GTMKAC	2 cut(s)	442, 581
AccII	CGCG	1 cut(s)	261
AciI	CCGC	9 cut(s)	24, 69, 78, 84, 256, 259, 424, 575, 609
AcoI	YGGCCR	1 cut(s)	34
AcsI	RAATTY	1 cut(s)	493
AcuI	CTGAAG	1 cut(s)	127
AcvI	CACGTG	1 cut(s)	12
AcyI	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
AfaI	GTAC	3 cut(s)	179, 413, 558
AfiI	CCNNNNNNNGG	2 cut(s)	215, 665
AgeI	ACCGGT	1 cut(s)	553
AgsI	TTSAA	1 cut(s)	835
AjiI	CACGTC	1 cut(s)	733
AjuI	GAANNNNNNNTTGG	2 cut(s)	325, 357
AloI	GAACNNNNNNTCC	2 cut(s)	155, 187
AluBI	AGCT	5 cut(s)	187, 675, 772, 826, 892
AluI	AGCT	5 cut(s)	187, 675, 772, 826, 892
Alw21I	GWGCWC	6 cut(s)	17, 300, 541, 677, 715, 828
Alw26I	GTCTC	5 cut(s)	9, 109, 464, 648, 927
Alw44I	GTGCAC	1 cut(s)	537
AoxI	GGCC	3 cut(s)	34, 60, 957
ApaLI	GTGCAC	1 cut(s)	537
ApeKI	GCWGC	2 cut(s)	187, 736
ApoI	RAATTY	1 cut(s)	493
AseI	ATTAAT	1 cut(s)	500
AsiGI	ACCGGT	1 cut(s)	553
AspLEI	GCGC	2 cut(s)	77, 267
AspS9I	GGNCC	2 cut(s)	652, 790
AsuHPI	GGTGA	4 cut(s)	115, 463, 655, 840
AvaII	GGWCC	2 cut(s)	652, 790
BaeGI	GKGCMC	1 cut(s)	541
BanI	GGYRCC	1 cut(s)	74
BanII	GRGCYC	2 cut(s)	677, 828
BbrPI	CACGTG	1 cut(s)	12
BbsI	GAAGAC	1 cut(s)	377
Bbv12I	GWGCWC	6 cut(s)	17, 300, 541, 677, 715, 828
BbvI	GCAGC	2 cut(s)	174, 748
BccI	CCATC	3 cut(s)	730, 736, 801
BceAI	ACGGC	4 cut(s)	49, 109, 432, 945
BcgI	CGANNNNNNTGC	2 cut(s)	586, 620
BcoDI	GTCTC	5 cut(s)	9, 109, 464, 648, 927
BfaI	CTAG	7 cut(s)	156, 357, 456, 515, 695, 852, 966
BfoI	RGCGCY	1 cut(s)	78
BglII	AGATCT	2 cut(s)	452, 511
BisI	GCNGC	4 cut(s)	78, 188, 259, 737
BlpI	GCTNAGC	1 cut(s)	822
BlsI	GCNGC	4 cut(s)	79, 189, 260, 738
BmcAI	AGTACT	1 cut(s)	413
Bme18I	GGWCC	2 cut(s)	652, 790
BmgBI	CACGTC	1 cut(s)	733
BmgT120I	GGNCC	2 cut(s)	652, 790
BmiI	GGNNCC	2 cut(s)	76, 801
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	2 cut(s)	105, 990
BmuI	ACTGGG	1 cut(s)	169
BpiI	GAAGAC	1 cut(s)	377
BplI	GAGNNNNNCTC	2 cut(s)	388, 420
Bpu1102I	GCTNAGC	1 cut(s)	822
BsaAI	YACGTR	1 cut(s)	12
BsaHI	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
BsaWI	WCCGGW	4 cut(s)	553, 646, 787, 796
BsaXI	ACNNNNNCTCC	4 cut(s)	155, 185, 466, 496
Bsc4I	CCNNNNNNNGG	2 cut(s)	215, 665
Bse118I	RCCGGY	4 cut(s)	65, 215, 553, 665
Bse1I	ACTGG	3 cut(s)	123, 175, 585
Bse3DI	GCAATG	1 cut(s)	872
BseGI	GGATG	2 cut(s)	722, 793
BseLI	CCNNNNNNNGG	2 cut(s)	215, 665
BseMI	GCAATG	1 cut(s)	872
BseMII	CTCAG	5 cut(s)	32, 401, 419, 433, 813
BseNI	ACTGG	3 cut(s)	123, 175, 585
BseRI	GAGGAG	3 cut(s)	305, 308, 723
BseSI	GKGCMC	1 cut(s)	541
BseXI	GCAGC	2 cut(s)	174, 748
BsgI	GTGCAG	2 cut(s)	506, 755
Bsh1236I	CGCG	1 cut(s)	261
BshFI	GGCC	3 cut(s)	36, 62, 959
BshNI	GGYRCC	1 cut(s)	74
BshTI	ACCGGT	1 cut(s)	553
BsiHKAI	GWGCWC	6 cut(s)	17, 300, 541, 677, 715, 828
BsiSI	CCGG	7 cut(s)	66, 216, 554, 647, 666, 788, 797
BslFI	GGGAC	1 cut(s)	737
BslI	CCNNNNNNNGG	2 cut(s)	215, 665
BsmAI	GTCTC	5 cut(s)	9, 109, 464, 648, 927
BsmFI	GGGAC	1 cut(s)	737
BsnI	GGCC	3 cut(s)	36, 62, 959
Bsp1286I	GDGCHC	6 cut(s)	17, 300, 541, 677, 715, 828
Bsp143I	GATC	2 cut(s)	452, 511
Bsp1720I	GCTNAGC	1 cut(s)	822
BspACI	CCGC	9 cut(s)	24, 69, 78, 84, 256, 259, 424, 575, 609
BspANI	GGCC	3 cut(s)	36, 62, 959
BspCNI	CTCAG	5 cut(s)	31, 400, 418, 432, 814
BspFNI	CGCG	1 cut(s)	261
BspHI	TCATGA	1 cut(s)	196
BspLI	GGNNCC	2 cut(s)	76, 801
BspQI	GCTCTTC	1 cut(s)	110
BspT107I	GGYRCC	1 cut(s)	74
BsrDI	GCAATG	1 cut(s)	872
BsrFI	RCCGGY	4 cut(s)	65, 215, 553, 665
BsrI	ACTGG	3 cut(s)	123, 175, 585
BssAI	RCCGGY	4 cut(s)	65, 215, 553, 665
BssMI	GATC	2 cut(s)	452, 511
BssNI	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
Bst4CI	ACNGT	3 cut(s)	440, 642, 921
Bst6I	CTCTTC	3 cut(s)	110, 143, 198
BstACI	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
BstBAI	YACGTR	1 cut(s)	12
BstC8I	GCNNGC	2 cut(s)	217, 263
BstDEI	CTNAG	5 cut(s)	18, 387, 405, 419, 822
BstEII	GGTNACC	1 cut(s)	121
BstF5I	GGATG	2 cut(s)	722, 793
BstFNI	CGCG	1 cut(s)	261
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	2 cut(s)	77, 267
BstKTI	GATC	2 cut(s)	455, 514
BstMAI	GTCTC	5 cut(s)	9, 109, 464, 648, 927
BstMBI	GATC	2 cut(s)	452, 511
BstMWI	GCNNNNNNNGC	9 cut(s)	21, 83, 221, 258, 264, 401, 818, 956, 978
BstNSI	RCATGY	1 cut(s)	54
BstPI	GGTNACC	1 cut(s)	121
BstSLI	GKGCMC	1 cut(s)	541
BstUI	CGCG	1 cut(s)	261
BstV1I	GCAGC	2 cut(s)	174, 748
BstV2I	GAAGAC	1 cut(s)	377
BstX2I	RGATCY	2 cut(s)	452, 511
BstYI	RGATCY	2 cut(s)	452, 511
BsuRI	GGCC	3 cut(s)	36, 62, 959
BtrI	CACGTC	1 cut(s)	733
BtsCI	GGATG	2 cut(s)	722, 793
BtsIMutI	CAGTG	4 cut(s)	26, 638, 972, 994
Cac8I	GCNNGC	2 cut(s)	217, 263
CciI	TCATGA	1 cut(s)	196
CfoI	GCGC	2 cut(s)	77, 267
Cfr10I	RCCGGY	4 cut(s)	65, 215, 553, 665
Cfr13I	GGNCC	2 cut(s)	652, 790
CseI	GACGC	3 cut(s)	221, 388, 453
Csp6I	GTAC	3 cut(s)	178, 412, 557
CspAI	ACCGGT	1 cut(s)	553
CviAII	CATG	7 cut(s)	51, 100, 197, 401, 490, 527, 961
CviQI	GTAC	3 cut(s)	178, 412, 557
DdeI	CTNAG	5 cut(s)	18, 387, 405, 419, 822
DinI	GGCGCC	1 cut(s)	76
DpnI	GATC	2 cut(s)	454, 513
DpnII	GATC	2 cut(s)	452, 511
EaeI	YGGCCR	1 cut(s)	34
Eam1104I	CTCTTC	3 cut(s)	110, 143, 198
EarI	CTCTTC	3 cut(s)	110, 143, 198
EciI	GGCGGA	1 cut(s)	439
Ecl136II	GAGCTC	2 cut(s)	675, 826
Eco24I	GRGCYC	2 cut(s)	677, 828
Eco32I	GATATC	1 cut(s)	469
Eco47I	GGWCC	2 cut(s)	652, 790
Eco53kI	GAGCTC	2 cut(s)	675, 826
Eco57I	CTGAAG	1 cut(s)	127
Eco72I	CACGTG	1 cut(s)	12
Eco91I	GGTNACC	1 cut(s)	121
EcoICRI	GAGCTC	2 cut(s)	675, 826
EcoO65I	GGTNACC	1 cut(s)	121
EcoRI	GAATTC	1 cut(s)	493
EcoRV	GATATC	1 cut(s)	469
EcoT38I	GRGCYC	2 cut(s)	677, 828
EgeI	GGCGCC	1 cut(s)	76
EheI	GGCGCC	1 cut(s)	76
FaeI	CATG	7 cut(s)	54, 103, 200, 404, 493, 530, 964
FaqI	GGGAC	1 cut(s)	737
FatI	CATG	7 cut(s)	50, 99, 196, 400, 489, 526, 960
FauI	CCCGC	3 cut(s)	17, 91, 602
FblI	GTMKAC	2 cut(s)	442, 581
Fnu4HI	GCNGC	4 cut(s)	78, 188, 259, 737
FokI	GGATG	2 cut(s)	709, 780
FriOI	GRGCYC	2 cut(s)	677, 828
Fsp4HI	GCNGC	4 cut(s)	78, 188, 259, 737
FspBI	CTAG	7 cut(s)	156, 357, 456, 515, 695, 852, 966
GlaI	GCGC	2 cut(s)	76, 266
GluI	GCNGC	4 cut(s)	78, 188, 259, 737
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	3 cut(s)	36, 62, 959
HapII	CCGG	7 cut(s)	66, 216, 554, 647, 666, 788, 797
HgaI	GACGC	3 cut(s)	221, 388, 453
HhaI	GCGC	2 cut(s)	77, 267
Hin1I	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
Hin1II	CATG	7 cut(s)	54, 103, 200, 404, 493, 530, 964
Hin6I	GCGC	2 cut(s)	75, 265
HinP1I	GCGC	2 cut(s)	75, 265
HincII	GTYRAC	1 cut(s)	582
HindII	GTYRAC	1 cut(s)	582
HinfI	GANTC	8 cut(s)	200, 373, 385, 397, 691, 784, 835, 937
HpaII	CCGG	7 cut(s)	66, 216, 554, 647, 666, 788, 797
HphI	GGTGA	4 cut(s)	115, 463, 655, 840
Hpy166II	GTNNAC	5 cut(s)	241, 285, 443, 539, 582
Hpy188I	TCNGA	6 cut(s)	229, 378, 408, 783, 913, 927
Hpy188III	TCNNGA	4 cut(s)	145, 197, 357, 367
Hpy8I	GTNNAC	5 cut(s)	241, 285, 443, 539, 582
Hpy99I	CGWCG	9 cut(s)	215, 233, 236, 239, 766, 907, 910, 913, 931
HpyAV	CCTTC	2 cut(s)	151, 319
HpyCH4III	ACNGT	3 cut(s)	440, 642, 921
HpyCH4IV	ACGT	4 cut(s)	11, 234, 732, 905
HpyCH4V	TGCA	5 cut(s)	54, 322, 523, 539, 736
HpyF10VI	GCNNNNNNNGC	9 cut(s)	21, 83, 221, 258, 264, 401, 818, 956, 978
HpyF3I	CTNAG	5 cut(s)	18, 387, 405, 419, 822
HpySE526I	ACGT	4 cut(s)	11, 234, 732, 905
Hsp92I	GRCGYC	6 cut(s)	75, 213, 234, 380, 445, 905
Hsp92II	CATG	7 cut(s)	54, 103, 200, 404, 493, 530, 964
HspAI	GCGC	2 cut(s)	75, 265
KasI	GGCGCC	1 cut(s)	74
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Kzo9I	GATC	2 cut(s)	452, 511
LguI	GCTCTTC	1 cut(s)	110
LmnI	GCTCC	2 cut(s)	295, 710
Lsp1109I	GCAGC	2 cut(s)	174, 748
LweI	GCATC	2 cut(s)	105, 990
MaeI	CTAG	7 cut(s)	156, 357, 456, 515, 695, 852, 966
MaeII	ACGT	4 cut(s)	11, 234, 732, 905
MaeIII	GTNAC	4 cut(s)	121, 661, 882, 938
MalI	GATC	2 cut(s)	454, 513
MboI	GATC	2 cut(s)	452, 511
MboII	GAAGA	7 cut(s)	97, 160, 185, 382, 518, 521, 926
MflI	RGATCY	2 cut(s)	452, 511
MhlI	GDGCHC	6 cut(s)	17, 300, 541, 677, 715, 828
MluCI	AATT	1 cut(s)	493
Mly113I	GGCGCC	1 cut(s)	75
MlyI	GAGTC	6 cut(s)	194, 367, 379, 406, 700, 946
MmeI	TCCRAC	5 cut(s)	228, 252, 891, 921, 950
MroNI	GCCGGC	1 cut(s)	215
MseI	TTAA	2 cut(s)	500, 590
MspA1I	CMGCKG	1 cut(s)	187
MspI	CCGG	7 cut(s)	66, 216, 554, 647, 666, 788, 797
MvnI	CGCG	1 cut(s)	261
MwoI	GCNNNNNNNGC	9 cut(s)	21, 83, 221, 258, 264, 401, 818, 956, 978
NaeI	GCCGGC	1 cut(s)	217
NarI	GGCGCC	1 cut(s)	75
NdeII	GATC	2 cut(s)	452, 511
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	7 cut(s)	54, 103, 200, 404, 493, 530, 964
NlaIV	GGNNCC	2 cut(s)	76, 801
NmeAIII	GCCGAG	1 cut(s)	712
NmuCI	GTSAC	4 cut(s)	121, 661, 882, 938
NspI	RCATGY	1 cut(s)	54
PagI	TCATGA	1 cut(s)	196
PciSI	GCTCTTC	1 cut(s)	110
PcsI	WCGNNNNNNNCGW	1 cut(s)	941
PdiI	GCCGGC	1 cut(s)	217
PfeI	GAWTC	2 cut(s)	784, 835
PflFI	GACNNNGTC	2 cut(s)	233, 907
PinAI	ACCGGT	1 cut(s)	553
PkrI	GCNGC	4 cut(s)	79, 189, 260, 738
PleI	GAGTC	6 cut(s)	194, 367, 379, 405, 699, 945
PluTI	GGCGCC	1 cut(s)	78
PmaCI	CACGTG	1 cut(s)	12
PmlI	CACGTG	1 cut(s)	12
PpsI	GAGTC	6 cut(s)	194, 367, 379, 405, 699, 945
Ppu21I	YACGTR	1 cut(s)	12
PshBI	ATTAAT	1 cut(s)	500
Psp124BI	GAGCTC	2 cut(s)	677, 828
PspCI	CACGTG	1 cut(s)	12
PspEI	GGTNACC	1 cut(s)	121
PspN4I	GGNNCC	2 cut(s)	76, 801
PspPI	GGNCC	2 cut(s)	652, 790
PsuI	RGATCY	2 cut(s)	452, 511
PsyI	GACNNNGTC	2 cut(s)	233, 907
PvuII	CAGCTG	1 cut(s)	187
RsaI	GTAC	3 cut(s)	179, 413, 558
RsaNI	GTAC	3 cut(s)	178, 412, 557
SacI	GAGCTC	2 cut(s)	677, 828
SalI	GTCGAC	1 cut(s)	580
SapI	GCTCTTC	1 cut(s)	110
SaqAI	TTAA	2 cut(s)	500, 590
SatI	GCNGC	4 cut(s)	78, 188, 259, 737
Sau3AI	GATC	2 cut(s)	452, 511
Sau96I	GGNCC	2 cut(s)	652, 790
ScaI	AGTACT	1 cut(s)	413
SchI	GAGTC	6 cut(s)	194, 367, 379, 406, 700, 946
SduI	GDGCHC	6 cut(s)	17, 300, 541, 677, 715, 828
SfaNI	GCATC	2 cut(s)	105, 990
SfoI	GGCGCC	1 cut(s)	76
SgrAI	CRCCGGYG	2 cut(s)	65, 665
SinI	GGWCC	2 cut(s)	652, 790
Sse9I	AATT	1 cut(s)	493
SsiI	CCGC	9 cut(s)	24, 69, 78, 84, 256, 259, 424, 575, 609
SspDI	GGCGCC	1 cut(s)	74
SspMI	CTAG	7 cut(s)	156, 357, 456, 515, 695, 852, 966
SstI	GAGCTC	2 cut(s)	677, 828
TaaI	ACNGT	3 cut(s)	440, 642, 921
TaiI	ACGT	4 cut(s)	14, 237, 735, 908
TaqI	TCGA	2 cut(s)	581, 935
TasI	AATT	1 cut(s)	493
TatI	WGTACW	1 cut(s)	411
TauI	GCSGC	2 cut(s)	80, 261
TfiI	GAWTC	2 cut(s)	784, 835
Tru1I	TTAA	2 cut(s)	500, 590
Tru9I	TTAA	2 cut(s)	500, 590
TscAI	CASTG	4 cut(s)	26, 645, 979, 994
TseFI	GTSAC	4 cut(s)	121, 661, 882, 938
TseI	GCWGC	2 cut(s)	187, 736
Tsp45I	GTSAC	4 cut(s)	121, 661, 882, 938
TspDTI	ATGAA	5 cut(s)	176, 185, 486, 506, 543
TspGWI	ACGGA	5 cut(s)	71, 302, 474, 767, 795
TspRI	CASTG	4 cut(s)	26, 645, 979, 994
Tth111I	GACNNNGTC	2 cut(s)	233, 907
VneI	GTGCAC	1 cut(s)	537
VpaK11BI	GGWCC	2 cut(s)	652, 790
VspI	ATTAAT	1 cut(s)	500
XapI	RAATTY	1 cut(s)	493
XbaI	TCTAGA	1 cut(s)	356
XceI	RCATGY	1 cut(s)	54
XmiI	GTMKAC	2 cut(s)	442, 581
XspI	CTAG	7 cut(s)	156, 357, 456, 515, 695, 852, 966
ZraI	GACGTC	2 cut(s)	235, 906
ZrmI	AGTACT	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.