Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001286

Physical Location & Seq

Genomic Coordinates Reverse (-)

88490594 .. 88496447

Gene Structure 5854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00067100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGCCTGCACAGAAGCGTGGCTTCGAGGCCGCGGAGGACGGTGATCCTGTGGAGAACCACCGCGAGAACGGCCTTGAGGAGCCGCAGGACGGAGAAGAGTCCGATCGGAGCCGGAGCCCCGAGCCGAGTGAGGACGAGAAGGACGACCAGAAACCCGAATACGTTGCAGTAAGACTGTCAGAAATTCGGAAAGAAGTGCAATGCCCTATCTGTCTAGGGATCATTAGGAAAACAAGAACAGTGATGGAATGCCTGCACCGCTTCTGTAGGGAATGCATTGACAAGTCCATGCGGCTTGGGAACAATGAATGCCCTGCATGCCGTACACATTGTGCTAGTCGTCGCTCTTTGAGAGATGATCCGAAGTACGATGCCTTAATTGCAGCTATTTATCCAGATATTGACAAGTATGAGGAAGAGGAATTAGCTTTTCATGAAGAAGAGAAGGCTCGCAATAAGCAGATCCAAGCTTCCATTGCCCAGACATTTCGACGACAATCCGAAGCACTTGGTAGGAAGCGAACAACAGCAAAAGCCACTGCAGCTGCATTTATGAGATCACAGGGTAACTATAAAAATTTGAGGAGGAGAAGGAATCATAAAAATACTGTTGAAATTCAAGGATCCGATGACAATGAGGAGGCAAATGGTAATGATGGAGGAAAAGATTCATCTTCTGGTGATGAGCGCAAAGAACCAAGACCAAAAAGACCCAAAAGATGGGCAGGAGCTCGATATTATCAGCCTTCATCAGCAACTGCCAATGCAGATGGTGATGATGAAAATGATTATGAGGTGAACAGAGAAGTTATGGGTGCATCTGTGGGGTTTGTTGGCAGTCCAGAAAGGCTTGCAGAAAGGCTTGCATGGGGTAAAGGTGGCATGCGGAGTCATACACGATATGGCAGTTCTAGTGGTGCCAATGGTAAGAATGCCAGGAACCGCCTTTCTAAGTTGGTGGATTATCTCCGGAACTCGGAAGCTAATGATAAAGGGCTGGATATCCACCTCCTACTTGTTTCTTTTGATGAACAAAGAATACCCAGTCTGCAGAGGCCTTATCTTTGCTGCAGTCCCACCCTGTCAGTTGGACAACTATGTCAGTATGTTGCTGCACAAACTGCACTGCAACCTGATGAAGTGCAAATATACTTTTTAAAAGAACTACAAGCCAAACTTAACCCATCAGACCCTACAAATGCTTCAGTTTCAACATCTGGTGTTTTAGATTCAAGCAAGGATACACTGCTTCTGTTAAGAGACGATGAATTATTGGGAGAAGTCCAAGTACGCCATCTCATTCGTGGCCATCTGCTTTTGGCGTATCAGAAGAAGTGGAACTTAAACCGTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0001709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0032501 GO:0032502 GO:0032991 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045165 GO:0045814 GO:0045892 GO:0045934 GO:0048507 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

451

Amino Acids

50.87

Weight (kDa)

6.55

Isoelectric Point (pI)

58.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_2	PF13923	67 - 107	1.4e-11	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	67 - 108	1.3e-07	Ring finger domain
zf-C3HC4	PF00097	68 - 107	9.9e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44280 AT5G44280 AT5G44280
fragaria_vesca	FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540
malus_domestica	MD05G1312000.v1.1 MD09G1244000.v1.1 MD10G1291500.v1.1 MD17G1235900.v1.1
prunus_persica	Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1
pyrus_communis	pycom05g28800 pycom09g16250 pycom10g24370
rosa_chinensis	RchiOBHm_Chr2g0127611 RchiOBHm_Chr5g0008911
rosa_laevigata	RLG00000018950 RLG00000031615
rosa_multiflora	Rmu_co8349609.1_g000001 Rmu_sc0004677.1_g000011 Rmu_ssc0000200.1_g000019
rosa_roxburghii	Rroxscaffold_1G00067100 Rroxscaffold_1G00067720 Rroxscaffold_2G00116570
rosa_rugosa	Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug04G0440100
rosa_samantha	Rh2AG324500 Rh2BG333800 Rh2CG312000 Rh2DG352000 Rh5AG068800 Rh5BG065500 Rh5CG076700 Rh5DG064500
rosa_wichuraiana	Rw2G026350 Rw5G006440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1098
AccB1I	GGYRCC	1 cut(s)	917
AccB7I	CCANNNNNTGG	1 cut(s)	720
AccII	CGCG	2 cut(s)	32, 63
AccIII	TCCGGA	1 cut(s)	969
AciI	CCGC	8 cut(s)	30, 32, 61, 83, 259, 292, 886, 943
AclWI	GGATC	6 cut(s)	38, 227, 353, 457, 618, 631
AcoI	YGGCCR	1 cut(s)	1306
AcsI	RAATTY	3 cut(s)	183, 577, 615
AcuI	CTGAAG	1 cut(s)	1188
AdeI	CACNNNGTG	1 cut(s)	332
AfaI	GTAC	3 cut(s)	325, 368, 1290
AfiI	CCNNNNNNNGG	3 cut(s)	89, 720, 976
AgsI	TTSAA	4 cut(s)	614, 620, 1212, 1233
AjnI	CCWGG	1 cut(s)	935
AluBI	AGCT	6 cut(s)	386, 428, 470, 545, 731, 983
AluI	AGCT	6 cut(s)	386, 428, 470, 545, 731, 983
Alw21I	GWGCWC	1 cut(s)	733
Alw26I	GTCTC	1 cut(s)	1254
AlwI	GGATC	6 cut(s)	38, 227, 353, 457, 618, 631
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	1 cut(s)	119
Aor13HI	TCCGGA	1 cut(s)	969
AoxI	GGCC	4 cut(s)	27, 70, 1055, 1306
ApeKI	GCWGC	5 cut(s)	383, 542, 545, 1068, 1112
ApoI	RAATTY	3 cut(s)	183, 577, 615
Asp700I	GAANNNNTTC	1 cut(s)	667
AspLEI	GCGC	1 cut(s)	690
AsuHPI	GGTGA	4 cut(s)	53, 692, 785, 808
AvaI	CYCGRG	1 cut(s)	119
BalI	TGGCCA	1 cut(s)	1308
BamHI	GGATCC	1 cut(s)	623
BanI	GGYRCC	1 cut(s)	917
BanII	GRGCYC	2 cut(s)	119, 733
BarI	GAAGNNNNNNTAC	2 cut(s)	1272, 1304
Bbv12I	GWGCWC	1 cut(s)	733
BbvI	GCAGC	5 cut(s)	395, 532, 554, 1055, 1099
BccI	CCATC	7 cut(s)	238, 650, 714, 764, 1192, 1302, 1317
BceAI	ACGGC	2 cut(s)	85, 306
BcgI	CGANNNNNNTGC	2 cut(s)	146, 180
BciT130I	CCWGG	1 cut(s)	937
BciVI	GTATCC	1 cut(s)	1234
BcoDI	GTCTC	1 cut(s)	1254
BfaI	CTAG	3 cut(s)	215, 336, 912
BfmI	CTRYAG	4 cut(s)	265, 540, 1049, 1069
BfuI	GTATCC	1 cut(s)	1234
BisI	GCNGC	8 cut(s)	30, 83, 293, 384, 543, 546, 1069, 1113
BlsI	GCNGC	8 cut(s)	31, 84, 294, 385, 544, 547, 1070, 1114
Bme1390I	CCNGG	1 cut(s)	937
BmeT110I	CYCGRG	1 cut(s)	119
BmiI	GGNNCC	6 cut(s)	81, 110, 116, 625, 919, 941
BmrFI	CCNGG	1 cut(s)	937
BmrI	ACTGGG	1 cut(s)	1038
BmsI	GCATC	2 cut(s)	361, 827
BmuI	ACTGGG	1 cut(s)	1038
BpuEI	CTTGAG	1 cut(s)	95
BsaJI	CCNNGG	2 cut(s)	30, 1348
BsaWI	WCCGGW	1 cut(s)	969
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 720, 976
Bse1I	ACTGG	1 cut(s)	1044
Bse3DI	GCAATG	2 cut(s)	206, 474
BseAI	TCCGGA	1 cut(s)	969
BseBI	CCWGG	1 cut(s)	937
BseDI	CCNNGG	2 cut(s)	30, 1348
BseLI	CCNNNNNNNGG	3 cut(s)	89, 720, 976
BseMI	GCAATG	2 cut(s)	206, 474
BseNI	ACTGG	1 cut(s)	1044
BseRI	GAGGAG	4 cut(s)	92, 598, 601, 653
BseXI	GCAGC	5 cut(s)	395, 532, 554, 1055, 1099
BsgI	GTGCAG	3 cut(s)	239, 1098, 1107
Bsh1236I	CGCG	2 cut(s)	32, 63
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	4 cut(s)	29, 72, 1057, 1308
BshNI	GGYRCC	1 cut(s)	917
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	1 cut(s)	733
BsiHKCI	CYCGRG	1 cut(s)	119
BsiSI	CCGG	2 cut(s)	112, 970
BslFI	GGGAC	1 cut(s)	1059
BslI	CCNNNNNNNGG	3 cut(s)	89, 720, 976
BsmAI	GTCTC	1 cut(s)	1254
BsmBI	CGTCTC	1 cut(s)	1254
BsmFI	GGGAC	1 cut(s)	1059
BsmI	GAATGC	4 cut(s)	254, 278, 314, 937
BsnI	GGCC	4 cut(s)	29, 72, 1057, 1308
BsoBI	CYCGRG	1 cut(s)	119
Bsp1286I	GDGCHC	2 cut(s)	119, 733
Bsp13I	TCCGGA	1 cut(s)	969
Bsp143I	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
BspACI	CCGC	8 cut(s)	30, 32, 61, 83, 259, 292, 886, 943
BspANI	GGCC	4 cut(s)	29, 72, 1057, 1308
BspEI	TCCGGA	1 cut(s)	969
BspFNI	CGCG	2 cut(s)	32, 63
BspHI	TCATGA	1 cut(s)	433
BspLI	GGNNCC	6 cut(s)	81, 110, 116, 625, 919, 941
BspMAI	CTGCAG	3 cut(s)	544, 1053, 1073
BspPI	GGATC	6 cut(s)	38, 227, 353, 457, 618, 631
BspT107I	GGYRCC	1 cut(s)	917
BsrDI	GCAATG	2 cut(s)	206, 474
BsrI	ACTGG	1 cut(s)	1044
BssECI	CCNNGG	2 cut(s)	30, 1348
BssMI	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
Bst2UI	CCWGG	1 cut(s)	937
Bst4CI	ACNGT	5 cut(s)	41, 177, 241, 610, 1349
Bst6I	CTCTTC	3 cut(s)	90, 411, 435
BstAPI	GCANNNNNTGC	1 cut(s)	1121
BstC8I	GCNNGC	7 cut(s)	6, 254, 319, 451, 852, 864, 884
BstDEI	CTNAG	1 cut(s)	951
BstDSI	CCRYGG	2 cut(s)	30, 1348
BstFNI	CGCG	2 cut(s)	32, 63
BstHHI	GCGC	1 cut(s)	690
BstKTI	GATC	7 cut(s)	46, 106, 222, 361, 465, 560, 626
BstMAI	GTCTC	1 cut(s)	1254
BstMBI	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 258, 318, 380, 476, 542, 1121
BstNI	CCWGG	1 cut(s)	937
BstNSI	RCATGY	2 cut(s)	321, 886
BstSCI	CCNGG	1 cut(s)	935
BstSFI	CTRYAG	4 cut(s)	265, 540, 1049, 1069
BstUI	CGCG	2 cut(s)	32, 63
BstV1I	GCAGC	5 cut(s)	395, 532, 554, 1055, 1099
BstX2I	RGATCY	2 cut(s)	462, 623
BstYI	RGATCY	2 cut(s)	462, 623
BsuI	GTATCC	1 cut(s)	1234
BsuRI	GGCC	4 cut(s)	29, 72, 1057, 1308
BtgI	CCRYGG	2 cut(s)	30, 1348
BtsI	GCAGTG	3 cut(s)	537, 1124, 1244
BtsIMutI	CAGTG	4 cut(s)	246, 537, 1124, 1244
Cac8I	GCNNGC	7 cut(s)	6, 254, 319, 451, 852, 864, 884
CaiI	CAGNNNCTG	1 cut(s)	758
CciI	TCATGA	1 cut(s)	433
CfoI	GCGC	1 cut(s)	690
Cfr42I	CCGCGG	1 cut(s)	33
Csp6I	GTAC	3 cut(s)	324, 367, 1289
CviAII	CATG	5 cut(s)	289, 318, 434, 867, 883
CviQI	GTAC	3 cut(s)	324, 367, 1289
DdeI	CTNAG	1 cut(s)	951
DpnI	GATC	7 cut(s)	45, 105, 221, 360, 464, 559, 625
DpnII	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
DraI	TTTAAA	1 cut(s)	1158
DraIII	CACNNNGTG	1 cut(s)	332
DrdI	GACNNNNNNGTC	1 cut(s)	1098
DseDI	GACNNNNNNGTC	1 cut(s)	1098
EaeI	YGGCCR	1 cut(s)	1306
Eam1104I	CTCTTC	3 cut(s)	90, 411, 435
EarI	CTCTTC	3 cut(s)	90, 411, 435
Ecl136II	GAGCTC	1 cut(s)	731
Eco147I	AGGCCT	1 cut(s)	1057
Eco24I	GRGCYC	2 cut(s)	119, 733
Eco32I	GATATC	1 cut(s)	1003
Eco53kI	GAGCTC	1 cut(s)	731
Eco57I	CTGAAG	1 cut(s)	1188
Eco88I	CYCGRG	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	731
EcoRII	CCWGG	1 cut(s)	935
EcoRV	GATATC	1 cut(s)	1003
EcoT22I	ATGCAT	1 cut(s)	278
EcoT38I	GRGCYC	2 cut(s)	119, 733
Esp3I	CGTCTC	1 cut(s)	1254
FaeI	CATG	5 cut(s)	292, 321, 437, 870, 886
FalI	AAGNNNNNCTT	4 cut(s)	37, 1161, 1193, 1325
FaqI	GGGAC	1 cut(s)	1059
FatI	CATG	5 cut(s)	288, 317, 433, 866, 882
Fnu4HI	GCNGC	8 cut(s)	30, 83, 293, 384, 543, 546, 1069, 1113
FriOI	GRGCYC	2 cut(s)	119, 733
Fsp4HI	GCNGC	8 cut(s)	30, 83, 293, 384, 543, 546, 1069, 1113
FspBI	CTAG	3 cut(s)	215, 336, 912
GlaI	GCGC	1 cut(s)	689
GluI	GCNGC	8 cut(s)	30, 83, 293, 384, 543, 546, 1069, 1113
HaeIII	GGCC	4 cut(s)	29, 72, 1057, 1308
HapII	CCGG	2 cut(s)	112, 970
HhaI	GCGC	1 cut(s)	690
Hin1II	CATG	5 cut(s)	292, 321, 437, 870, 886
Hin6I	GCGC	1 cut(s)	688
HinP1I	GCGC	1 cut(s)	688
HindIII	AAGCTT	1 cut(s)	468
HinfI	GANTC	5 cut(s)	98, 595, 668, 889, 1229
HpaII	CCGG	2 cut(s)	112, 970
HphI	GGTGA	4 cut(s)	53, 692, 785, 808
Hpy166II	GTNNAC	2 cut(s)	326, 799
Hpy188III	TCNNGA	4 cut(s)	395, 434, 842, 970
Hpy8I	GTNNAC	2 cut(s)	326, 799
Hpy99I	CGWCG	2 cut(s)	345, 495
HpyAV	CCTTC	4 cut(s)	133, 439, 585, 756
HpyCH4III	ACNGT	5 cut(s)	41, 177, 241, 610, 1349
HpyCH4IV	ACGT	1 cut(s)	162
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 258, 318, 380, 476, 542, 1121
HpyF3I	CTNAG	1 cut(s)	951
HpySE526I	ACGT	1 cut(s)	162
Hsp92II	CATG	5 cut(s)	292, 321, 437, 870, 886
HspAI	GCGC	1 cut(s)	688
Kpn2I	TCCGGA	1 cut(s)	969
KspI	CCGCGG	1 cut(s)	33
Kzo9I	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
LmnI	GCTCC	4 cut(s)	79, 108, 114, 728
Lsp1109I	GCAGC	5 cut(s)	395, 532, 554, 1055, 1099
LweI	GCATC	2 cut(s)	361, 827
MaeI	CTAG	3 cut(s)	215, 336, 912
MaeII	ACGT	1 cut(s)	162
MaeIII	GTNAC	1 cut(s)	566
MalI	GATC	7 cut(s)	45, 105, 221, 360, 464, 559, 625
MboI	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
MboII	GAAGA	6 cut(s)	107, 428, 449, 452, 666, 1342
MflI	RGATCY	2 cut(s)	462, 623
MhlI	GDGCHC	2 cut(s)	119, 733
MlsI	TGGCCA	1 cut(s)	1308
MluCI	AATT	6 cut(s)	183, 378, 422, 577, 615, 1268
MluNI	TGGCCA	1 cut(s)	1308
MlyI	GAGTC	2 cut(s)	107, 898
MmeI	TCCRAC	1 cut(s)	1069
Mox20I	TGGCCA	1 cut(s)	1308
Mph1103I	ATGCAT	1 cut(s)	278
MroI	TCCGGA	1 cut(s)	969
MroXI	GAANNNNTTC	1 cut(s)	667
MscI	TGGCCA	1 cut(s)	1308
MseI	TTAA	5 cut(s)	377, 1157, 1179, 1256, 1343
Msp20I	TGGCCA	1 cut(s)	1308
MspA1I	CMGCKG	2 cut(s)	32, 545
MspI	CCGG	2 cut(s)	112, 970
MspR9I	CCNGG	1 cut(s)	937
Mva1269I	GAATGC	4 cut(s)	254, 278, 314, 937
MvaI	CCWGG	1 cut(s)	937
MvnI	CGCG	2 cut(s)	32, 63
MwoI	GCNNNNNNNGC	7 cut(s)	69, 258, 318, 380, 476, 542, 1121
NdeII	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
NlaIII	CATG	5 cut(s)	292, 321, 437, 870, 886
NlaIV	GGNNCC	6 cut(s)	81, 110, 116, 625, 919, 941
NmeAIII	GCCGAG	1 cut(s)	150
NsiI	ATGCAT	1 cut(s)	278
NspI	RCATGY	2 cut(s)	321, 886
PaeI	GCATGC	2 cut(s)	321, 886
PagI	TCATGA	1 cut(s)	433
PceI	AGGCCT	1 cut(s)	1057
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	4 cut(s)	254, 278, 314, 937
PdmI	GAANNNNTTC	1 cut(s)	667
PfeI	GAWTC	3 cut(s)	595, 668, 1229
PflMI	CCANNNNNTGG	1 cut(s)	720
PkrI	GCNGC	8 cut(s)	31, 84, 294, 385, 544, 547, 1070, 1114
Ple19I	CGATCG	1 cut(s)	106
PleI	GAGTC	2 cut(s)	106, 897
PpsI	GAGTC	2 cut(s)	106, 897
Psp124BI	GAGCTC	1 cut(s)	733
Psp6I	CCWGG	1 cut(s)	935
PspGI	CCWGG	1 cut(s)	935
PspN4I	GGNNCC	6 cut(s)	81, 110, 116, 625, 919, 941
PsrI	GAACNNNNNNTAC	2 cut(s)	1023, 1055
PstI	CTGCAG	3 cut(s)	544, 1053, 1073
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	2 cut(s)	462, 623
PvuI	CGATCG	1 cut(s)	106
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	3 cut(s)	325, 368, 1290
RsaNI	GTAC	3 cut(s)	324, 367, 1289
SacI	GAGCTC	1 cut(s)	733
SacII	CCGCGG	1 cut(s)	33
SaqAI	TTAA	5 cut(s)	377, 1157, 1179, 1256, 1343
SatI	GCNGC	8 cut(s)	30, 83, 293, 384, 543, 546, 1069, 1113
Sau3AI	GATC	7 cut(s)	43, 103, 219, 358, 462, 557, 623
SchI	GAGTC	2 cut(s)	107, 898
ScrFI	CCNGG	1 cut(s)	937
SduI	GDGCHC	2 cut(s)	119, 733
SfaNI	GCATC	2 cut(s)	361, 827
SfcI	CTRYAG	4 cut(s)	265, 540, 1049, 1069
Sfr303I	CCGCGG	1 cut(s)	33
SgrBI	CCGCGG	1 cut(s)	33
SmlI	CTYRAG	1 cut(s)	74
SmoI	CTYRAG	1 cut(s)	74
SphI	GCATGC	2 cut(s)	321, 886
Sse9I	AATT	6 cut(s)	183, 378, 422, 577, 615, 1268
SseBI	AGGCCT	1 cut(s)	1057
SsiI	CCGC	8 cut(s)	30, 32, 61, 83, 259, 292, 886, 943
SspMI	CTAG	3 cut(s)	215, 336, 912
SstI	GAGCTC	1 cut(s)	733
StuI	AGGCCT	1 cut(s)	1057
StyD4I	CCNGG	1 cut(s)	935
TaaI	ACNGT	5 cut(s)	41, 177, 241, 610, 1349
TaiI	ACGT	1 cut(s)	165
TaqI	TCGA	3 cut(s)	24, 490, 733
TasI	AATT	6 cut(s)	183, 378, 422, 577, 615, 1268
TauI	GCSGC	3 cut(s)	32, 85, 295
TfiI	GAWTC	3 cut(s)	595, 668, 1229
Tru1I	TTAA	5 cut(s)	377, 1157, 1179, 1256, 1343
Tru9I	TTAA	5 cut(s)	377, 1157, 1179, 1256, 1343
TscAI	CASTG	4 cut(s)	246, 544, 1131, 1251
TseI	GCWGC	5 cut(s)	383, 542, 545, 1068, 1112
TspDTI	ATGAA	9 cut(s)	321, 422, 450, 660, 738, 795, 1044, 1152, 1281
TspGWI	ACGGA	1 cut(s)	105
TspRI	CASTG	4 cut(s)	246, 544, 1131, 1251
Van91I	CCANNNNNTGG	1 cut(s)	720
XapI	RAATTY	3 cut(s)	183, 577, 615
XceI	RCATGY	2 cut(s)	321, 886
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1301
XmnI	GAANNNNTTC	1 cut(s)	667
XspI	CTAG	3 cut(s)	215, 336, 912
Zsp2I	ATGCAT	1 cut(s)	278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.