Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001286

Physical Location & Seq

Genomic Coordinates Forward (+)

46684235 .. 46692259

Gene Structure 8025 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG324500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGCCTGCCCAGAAGCGTTCCTTGCCGGACAACCTCACCGACGATGACGACGACGACCCCACACCTCACCACCGCCACCGCCCCAAGCAATCTCGACCCCAAGATGAACTCCTACAACAACAACAACAACAACAAGAGCAACAAGGAGACGTAGTAGTAGAACAACAACAACAACAACAACAACAAGAGGAGGAGGAGGAAGATGAAGAAGAAAACGACGACGTCGAAGAAGAAGAAGAAGAAGAAGATGAGGAATACGATCGAGATGAAGTTGACGATTATGACGGAAGCCCATCCTCTACCTCTCAACAAAACCCCGAATTTGTACTTGTACAACTGGCAGATATTCGTAAAGATGTACACTGCCCAATATGTCTCGGGATTATTAAGAAGACACGGACTGTAATGGAATGCCTACACAGGTTTTGCAGGGAATGCATCGACAAGTCAATGCGAATGGGGAACAATGAGTGCCCTGCTTGCCGCACACACTGTGCCAGTCGACGGTCTTTGAGAGATGATCCAAATTATGATGCCCTAATTGCAACATTATATCCAGATATTGAGAAATATGAGAAGGAGGAATTGGCTTTCCATGAAGAGGAGAGGACTCGAAATGAGCAGATACAAGCATCAATTGCCCAAATATTCCAACGACAATCAGAAGCTTTAATCAAGAGACGCTCACTTGGCAAAGATACCCAAGATGCATATAATATGAGATCCCTGCGCAATAATCGGAGTGGTTTCCGAAGGAGAAGAAACTCTCAAGCCACTGAACTCCAAGGGTTTGAAGACAATGAGGATGAAAATGACACTAGTAACATGGGCACAAAATCGCCTTCAGCTGAAGAGAGACATACTGAAGTGAGGCCAAGACGGCTAAGAAGACGGACAGGATTTCGATCATCTCAGCCTTCATCATCTGTGACTAATTCAAATGGAGGATGCACTGAAAATGATGTAGAAGTGAGCCGAGAGAACAGGGGAATTTCACCGGGTCTTGTGTGGAGCTCTGAAATGCTTGCTTGGGGCCGGGGTGGTGCTCGGAGTCACACCCGGCATGGCATTGCAAGCGGTTGCAGCAATAAGAGTTCTCGAAGCACTCGCTTATCAAAGTTGGTCGATTACCTTCGGAACCTCAAGGAAAACAATGATGAGTTAGATGTTCATCTCATGCTTATTTCTTTGGATAAAAGATGCACACCAAACTTGCAGCAGCCTCACCTTTGCTGTAGGCCGAGTTTGTCAGTCAAGCACCTTTGTGAATATGTTGCTCGTCAAACACCTTTGCAAGCCGAAGAAGTTGAGTTGTTCTCAGTTAAAGGACACCACAATTCCAATGACGAAAAATTGACTGATCACCCATCAGCGTTAATGAATGATCTGGATTCAGTTCCCCTTTTGGTTGATCCATGCAGATATGATTTGCAAATTCTGCAAGCAGAAGAAACTTTGGCAGGGATTAAAGCCAATTGCACTTCCAGTAGGGACCGCTTGATTCTAGCATACAGGCGGAAGGAGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0001709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019827 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0032501 GO:0032502 GO:0032991 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045165 GO:0045814 GO:0045892 GO:0045934 GO:0048507 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

509

Amino Acids

58.73

Weight (kDa)

5.12

Isoelectric Point (pI)

83.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	121 - 162	1.1e-07	Ring finger domain
zf-C3HC4_2	PF13923	122 - 161	2.6e-11	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	122 - 161	3.6e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44280 AT5G44280 AT5G44280
fragaria_vesca	FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_3g08840 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540 FvH4_6g26540
malus_domestica	MD05G1312000.v1.1 MD09G1244000.v1.1 MD10G1291500.v1.1 MD17G1235900.v1.1
prunus_persica	Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.3G139900_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1 Prupe.4G050700_v2.0.a1
pyrus_communis	pycom05g28800 pycom09g16250 pycom10g24370
rosa_chinensis	RchiOBHm_Chr2g0127611 RchiOBHm_Chr5g0008911
rosa_laevigata	RLG00000018950 RLG00000031615
rosa_multiflora	Rmu_co8349609.1_g000001 Rmu_sc0004677.1_g000011 Rmu_ssc0000200.1_g000019
rosa_roxburghii	Rroxscaffold_1G00067100 Rroxscaffold_1G00067720 Rroxscaffold_2G00116570
rosa_rugosa	Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug02G0272500 Rorug04G0440100
rosa_samantha	Rh2AG324500 Rh2BG333800 Rh2CG312000 Rh2DG352000 Rh5AG068800 Rh5BG065500 Rh5CG076700 Rh5DG064500
rosa_wichuraiana	Rw2G026350 Rw5G006440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	225
Acc16I	TGCGCA	1 cut(s)	731
AccI	GTMKAC	1 cut(s)	502
AciI	CCGC	6 cut(s)	73, 79, 484, 1077, 1495, 1516
AclWI	GGATC	3 cut(s)	515, 717, 1406
AcsI	RAATTY	3 cut(s)	320, 990, 1434
AcuI	CTGAAG	3 cut(s)	828, 870, 885
AcyI	GRCGYC	1 cut(s)	222
AdeI	CACNNNGTG	1 cut(s)	494
AfaI	GTAC	3 cut(s)	327, 333, 360
AfiI	CCNNNNNNNGG	2 cut(s)	504, 601
AgsI	TTSAA	2 cut(s)	794, 939
AhlI	ACTAGT	1 cut(s)	818
AjuI	GAANNNNNNNTTGG	2 cut(s)	569, 601
AleI	CACNNNNGTG	1 cut(s)	1263
AluBI	AGCT	3 cut(s)	668, 848, 1014
AluI	AGCT	3 cut(s)	668, 848, 1014
Alw21I	GWGCWC	2 cut(s)	1016, 1048
Alw26I	GTCTC	4 cut(s)	141, 380, 673, 850
AlwI	GGATC	3 cut(s)	515, 717, 1406
Ama87I	CYCGRG	1 cut(s)	377
AoxI	GGCC	3 cut(s)	872, 1033, 1238
ApeKI	GCWGC	3 cut(s)	1083, 1216, 1219
ApoI	RAATTY	3 cut(s)	320, 990, 1434
AspLEI	GCGC	1 cut(s)	732
AspS9I	GGNCC	2 cut(s)	1033, 1492
AsuC2I	CCSGG	3 cut(s)	999, 1037, 1060
AsuHPI	GGTGA	5 cut(s)	28, 59, 987, 1217, 1355
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	1 cut(s)	1492
BaeGI	GKGCMC	2 cut(s)	476, 833
BanII	GRGCYC	1 cut(s)	1016
BbsI	GAAGAC	3 cut(s)	398, 801, 895
Bbv12I	GWGCWC	2 cut(s)	1016, 1048
BbvI	GCAGC	3 cut(s)	1095, 1228, 1231
BccI	CCATC	2 cut(s)	301, 1375
BceAI	ACGGC	1 cut(s)	896
BclI	TGATCA	1 cut(s)	1360
BcnI	CCSGG	3 cut(s)	999, 1037, 1060
BcoDI	GTCTC	4 cut(s)	141, 380, 673, 850
BcuI	ACTAGT	1 cut(s)	818
BfaI	CTAG	3 cut(s)	819, 1505, 1528
BfmI	CTRYAG	1 cut(s)	1234
BglI	GCCNNNNNGGC	1 cut(s)	880
BglII	AGATCT	1 cut(s)	1524
BisI	GCNGC	4 cut(s)	484, 1084, 1217, 1220
BlsI	GCNGC	4 cut(s)	485, 1085, 1218, 1221
Bme1390I	CCNGG	3 cut(s)	999, 1037, 1060
Bme18I	GGWCC	1 cut(s)	1492
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	2 cut(s)	1033, 1492
BmiI	GGNNCC	3 cut(s)	1034, 1139, 1493
BmrFI	CCNGG	3 cut(s)	999, 1037, 1060
BmsI	GCATC	6 cut(s)	447, 523, 641, 697, 938, 1190
BpiI	GAAGAC	3 cut(s)	398, 801, 895
BplI	GAGNNNNNCTC	2 cut(s)	1301, 1333
BpuEI	CTTGAG	2 cut(s)	753, 1127
BpuMI	CCSGG	3 cut(s)	999, 1037, 1060
BsaBI	GATNNNNATC	2 cut(s)	904, 1170
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	2 cut(s)	784, 1036
BsaXI	ACNNNNNCTCC	2 cut(s)	138, 168
Bsc4I	CCNNNNNNNGG	2 cut(s)	504, 601
Bse1I	ACTGG	3 cut(s)	342, 498, 1485
Bse3DI	GCAATG	1 cut(s)	1068
Bse8I	GATNNNNATC	2 cut(s)	904, 1170
BseDI	CCNNGG	2 cut(s)	784, 1036
BseGI	GGATG	3 cut(s)	293, 811, 953
BseJI	GATNNNNATC	2 cut(s)	904, 1170
BseLI	CCNNNNNNNGG	2 cut(s)	504, 601
BseMI	GCAATG	1 cut(s)	1068
BseMII	CTCAG	2 cut(s)	926, 1332
BseNI	ACTGG	3 cut(s)	342, 498, 1485
BseRI	GAGGAG	4 cut(s)	203, 206, 209, 617
BseSI	GKGCMC	2 cut(s)	476, 833
BseXI	GCAGC	3 cut(s)	1095, 1228, 1231
Bsh1285I	CGRYCG	1 cut(s)	262
BshFI	GGCC	3 cut(s)	874, 1035, 1240
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	2 cut(s)	1016, 1048
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	4 cut(s)	26, 998, 1036, 1060
BslFI	GGGAC	1 cut(s)	1505
BslI	CCNNNNNNNGG	2 cut(s)	504, 601
BsmAI	GTCTC	4 cut(s)	141, 380, 673, 850
BsmBI	CGTCTC	2 cut(s)	141, 673
BsmFI	GGGAC	1 cut(s)	1505
BsmI	GAATGC	2 cut(s)	416, 440
BsnI	GGCC	3 cut(s)	874, 1035, 1240
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	4 cut(s)	476, 833, 1016, 1048
Bsp1407I	TGTACA	2 cut(s)	331, 358
Bsp143I	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
BspACI	CCGC	6 cut(s)	73, 79, 484, 1077, 1495, 1516
BspANI	GGCC	3 cut(s)	874, 1035, 1240
BspCNI	CTCAG	2 cut(s)	925, 1331
BspLI	GGNNCC	3 cut(s)	1034, 1139, 1493
BspPI	GGATC	3 cut(s)	515, 717, 1406
BsrDI	GCAATG	1 cut(s)	1068
BsrGI	TGTACA	2 cut(s)	331, 358
BsrI	ACTGG	3 cut(s)	342, 498, 1485
BssECI	CCNNGG	2 cut(s)	784, 1036
BssMI	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	1 cut(s)	784
Bst4CI	ACNGT	3 cut(s)	403, 494, 507
Bst6I	CTCTTC	2 cut(s)	594, 846
BstACI	GRCGYC	1 cut(s)	222
BstAPI	GCANNNNNTGC	3 cut(s)	435, 638, 1438
BstAUI	TGTACA	2 cut(s)	331, 358
BstC8I	GCNNGC	6 cut(s)	6, 481, 1026, 1075, 1296, 1443
BstDEI	CTNAG	3 cut(s)	884, 912, 1318
BstF5I	GGATG	3 cut(s)	293, 811, 953
BstHHI	GCGC	1 cut(s)	732
BstKTI	GATC	8 cut(s)	262, 523, 725, 908, 1363, 1387, 1414, 1527
BstMAI	GTCTC	4 cut(s)	141, 380, 673, 850
BstMBI	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
BstMCI	CGRYCG	1 cut(s)	262
BstSCI	CCNGG	3 cut(s)	997, 1035, 1058
BstSFI	CTRYAG	1 cut(s)	1234
BstSLI	GKGCMC	2 cut(s)	476, 833
BstV1I	GCAGC	3 cut(s)	1095, 1228, 1231
BstV2I	GAAGAC	3 cut(s)	398, 801, 895
BstX2I	RGATCY	2 cut(s)	722, 1524
BstYI	RGATCY	2 cut(s)	722, 1524
BsuRI	GGCC	3 cut(s)	874, 1035, 1240
BtsCI	GGATG	3 cut(s)	293, 811, 953
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	4 cut(s)	361, 490, 774, 951
Cac8I	GCNNGC	6 cut(s)	6, 481, 1026, 1075, 1296, 1443
CfoI	GCGC	1 cut(s)	732
Cfr13I	GGNCC	2 cut(s)	1033, 1492
CseI	GACGC	1 cut(s)	690
Csp6I	GTAC	3 cut(s)	326, 332, 359
CviAII	CATG	5 cut(s)	596, 826, 1064, 1177, 1416
CviQI	GTAC	3 cut(s)	326, 332, 359
DdeI	CTNAG	3 cut(s)	884, 912, 1318
DpnI	GATC	8 cut(s)	261, 522, 724, 907, 1362, 1386, 1413, 1526
DpnII	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
DraIII	CACNNNGTG	1 cut(s)	494
Eam1104I	CTCTTC	2 cut(s)	594, 846
EarI	CTCTTC	2 cut(s)	594, 846
Ecl136II	GAGCTC	1 cut(s)	1014
Eco130I	CCWWGG	1 cut(s)	784
Eco24I	GRGCYC	1 cut(s)	1016
Eco47I	GGWCC	1 cut(s)	1492
Eco53kI	GAGCTC	1 cut(s)	1014
Eco57I	CTGAAG	3 cut(s)	828, 870, 885
Eco88I	CYCGRG	1 cut(s)	377
EcoICRI	GAGCTC	1 cut(s)	1014
EcoT14I	CCWWGG	1 cut(s)	784
EcoT22I	ATGCAT	2 cut(s)	440, 712
EcoT38I	GRGCYC	1 cut(s)	1016
ErhI	CCWWGG	1 cut(s)	784
Esp3I	CGTCTC	2 cut(s)	141, 673
FaeI	CATG	5 cut(s)	599, 829, 1067, 1180, 1419
FalI	AAGNNNNNCTT	1 cut(s)	37
FaqI	GGGAC	1 cut(s)	1505
FatI	CATG	5 cut(s)	595, 825, 1063, 1176, 1415
FbaI	TGATCA	1 cut(s)	1360
FblI	GTMKAC	1 cut(s)	502
Fnu4HI	GCNGC	4 cut(s)	484, 1084, 1217, 1220
FokI	GGATG	3 cut(s)	280, 818, 960
FriOI	GRGCYC	1 cut(s)	1016
Fsp4HI	GCNGC	4 cut(s)	484, 1084, 1217, 1220
FspBI	CTAG	3 cut(s)	819, 1505, 1528
FspI	TGCGCA	1 cut(s)	731
GlaI	GCGC	1 cut(s)	731
GluI	GCNGC	4 cut(s)	484, 1084, 1217, 1220
HaeIII	GGCC	3 cut(s)	874, 1035, 1240
HapII	CCGG	4 cut(s)	26, 998, 1036, 1060
HgaI	GACGC	1 cut(s)	690
HhaI	GCGC	1 cut(s)	732
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	5 cut(s)	599, 829, 1067, 1180, 1419
Hin6I	GCGC	1 cut(s)	730
HinP1I	GCGC	1 cut(s)	730
HincII	GTYRAC	2 cut(s)	274, 503
HindII	GTYRAC	2 cut(s)	274, 503
HindIII	AAGCTT	1 cut(s)	666
HinfI	GANTC	4 cut(s)	610, 1051, 1391, 1501
HpaII	CCGG	4 cut(s)	26, 998, 1036, 1060
HphI	GGTGA	5 cut(s)	28, 59, 987, 1217, 1355
Hpy166II	GTNNAC	3 cut(s)	274, 361, 503
Hpy188I	TCNGA	6 cut(s)	664, 741, 752, 1018, 1050, 1137
Hpy188III	TCNNGA	7 cut(s)	93, 263, 379, 557, 676, 1098, 1388
Hpy8I	GTNNAC	3 cut(s)	274, 361, 503
Hpy99I	CGWCG	7 cut(s)	44, 53, 56, 221, 224, 227, 507
HpyAV	CCTTC	6 cut(s)	571, 747, 852, 927, 1142, 1513
HpyCH4III	ACNGT	3 cut(s)	403, 494, 507
HpyCH4IV	ACGT	2 cut(s)	150, 222
HpyF3I	CTNAG	3 cut(s)	884, 912, 1318
HpySE526I	ACGT	2 cut(s)	150, 222
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	5 cut(s)	599, 829, 1067, 1180, 1419
HspAI	GCGC	1 cut(s)	730
Ksp22I	TGATCA	1 cut(s)	1360
Kzo9I	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
LmnI	GCTCC	1 cut(s)	1011
Lsp1109I	GCAGC	3 cut(s)	1095, 1228, 1231
LweI	GCATC	6 cut(s)	447, 523, 641, 697, 938, 1190
MaeI	CTAG	3 cut(s)	819, 1505, 1528
MaeII	ACGT	2 cut(s)	150, 222
MaeIII	GTNAC	3 cut(s)	821, 928, 1052
MalI	GATC	8 cut(s)	261, 522, 724, 907, 1362, 1386, 1413, 1526
MboI	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
MfeI	CAATTG	2 cut(s)	636, 1474
MflI	RGATCY	2 cut(s)	722, 1524
MhlI	GDGCHC	4 cut(s)	476, 833, 1016, 1048
MlyI	GAGTC	2 cut(s)	604, 1060
MmeI	TCCRAC	1 cut(s)	676
Mph1103I	ATGCAT	2 cut(s)	440, 712
MseI	TTAA	5 cut(s)	387, 671, 1323, 1376, 1467
MslI	CAYNNNNRTG	1 cut(s)	1263
MspA1I	CMGCKG	1 cut(s)	848
MspI	CCGG	4 cut(s)	26, 998, 1036, 1060
MspR9I	CCNGG	3 cut(s)	999, 1037, 1060
MunI	CAATTG	2 cut(s)	636, 1474
Mva1269I	GAATGC	2 cut(s)	416, 440
NciI	CCSGG	3 cut(s)	999, 1037, 1060
NdeII	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
NlaIII	CATG	5 cut(s)	599, 829, 1067, 1180, 1419
NlaIV	GGNNCC	3 cut(s)	1034, 1139, 1493
NmeAIII	GCCGAG	2 cut(s)	1001, 1266
NmuCI	GTSAC	2 cut(s)	928, 1052
NsbI	TGCGCA	1 cut(s)	731
NsiI	ATGCAT	2 cut(s)	440, 712
OliI	CACNNNNGTG	1 cut(s)	1263
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 222
PctI	GAATGC	2 cut(s)	416, 440
PfeI	GAWTC	2 cut(s)	1391, 1501
PflFI	GACNNNGTC	1 cut(s)	221
PkrI	GCNGC	4 cut(s)	485, 1085, 1218, 1221
Ple19I	CGATCG	1 cut(s)	262
PleI	GAGTC	2 cut(s)	604, 1059
PpsI	GAGTC	2 cut(s)	604, 1059
Psp124BI	GAGCTC	1 cut(s)	1016
PspN4I	GGNNCC	3 cut(s)	1034, 1139, 1493
PspPI	GGNCC	2 cut(s)	1033, 1492
PsuI	RGATCY	2 cut(s)	722, 1524
PsyI	GACNNNGTC	1 cut(s)	221
PvuI	CGATCG	1 cut(s)	262
PvuII	CAGCTG	1 cut(s)	848
RsaI	GTAC	3 cut(s)	327, 333, 360
RsaNI	GTAC	3 cut(s)	326, 332, 359
RseI	CAYNNNNRTG	1 cut(s)	1263
SacI	GAGCTC	1 cut(s)	1016
SalI	GTCGAC	1 cut(s)	501
SaqAI	TTAA	5 cut(s)	387, 671, 1323, 1376, 1467
SatI	GCNGC	4 cut(s)	484, 1084, 1217, 1220
Sau3AI	GATC	8 cut(s)	259, 520, 722, 905, 1360, 1384, 1411, 1524
Sau96I	GGNCC	2 cut(s)	1033, 1492
SchI	GAGTC	2 cut(s)	604, 1060
ScrFI	CCNGG	3 cut(s)	999, 1037, 1060
SduI	GDGCHC	4 cut(s)	476, 833, 1016, 1048
SfaNI	GCATC	6 cut(s)	447, 523, 641, 697, 938, 1190
SfcI	CTRYAG	1 cut(s)	1234
SinI	GGWCC	1 cut(s)	1492
SmiMI	CAYNNNNRTG	1 cut(s)	1263
SmlI	CTYRAG	2 cut(s)	768, 1142
SmoI	CTYRAG	2 cut(s)	768, 1142
SpeI	ACTAGT	1 cut(s)	818
SsiI	CCGC	6 cut(s)	73, 79, 484, 1077, 1495, 1516
SspI	AATATT	1 cut(s)	648
SspMI	CTAG	3 cut(s)	819, 1505, 1528
SstI	GAGCTC	1 cut(s)	1016
StyD4I	CCNGG	3 cut(s)	997, 1035, 1058
StyI	CCWWGG	1 cut(s)	784
TaaI	ACNGT	3 cut(s)	403, 494, 507
TaiI	ACGT	2 cut(s)	153, 225
TaqI	TCGA	9 cut(s)	94, 225, 262, 441, 502, 613, 904, 1099, 1125
TatI	WGTACW	3 cut(s)	325, 331, 358
TauI	GCSGC	1 cut(s)	486
TfiI	GAWTC	2 cut(s)	1391, 1501
Tru1I	TTAA	5 cut(s)	387, 671, 1323, 1376, 1467
Tru9I	TTAA	5 cut(s)	387, 671, 1323, 1376, 1467
TscAI	CASTG	4 cut(s)	368, 497, 781, 958
TseFI	GTSAC	2 cut(s)	928, 1052
TseI	GCWGC	3 cut(s)	1083, 1216, 1219
Tsp45I	GTSAC	2 cut(s)	928, 1052
TspDTI	ATGAA	8 cut(s)	120, 219, 282, 612, 822, 909, 1160, 1394
TspGWI	ACGGA	3 cut(s)	300, 412, 907
TspRI	CASTG	4 cut(s)	368, 497, 781, 958
Tth111I	GACNNNGTC	1 cut(s)	221
VpaK11BI	GGWCC	1 cut(s)	1492
XapI	RAATTY	3 cut(s)	320, 990, 1434
XmiI	GTMKAC	1 cut(s)	502
XspI	CTAG	3 cut(s)	819, 1505, 1528
ZraI	GACGTC	1 cut(s)	223
Zsp2I	ATGCAT	2 cut(s)	440, 712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.