E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 216 |
| Acc16I | TGCGCA | 1 cut(s) | 716 |
| AccI | GTMKAC | 1 cut(s) | 487 |
| AciI | CCGC | 5 cut(s) | 73, 79, 469, 1062, 1208 |
| AclWI | GGATC | 2 cut(s) | 500, 702 |
| AcsI | RAATTY | 2 cut(s) | 305, 975 |
| AcuI | CTGAAG | 2 cut(s) | 813, 855 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AdeI | CACNNNGTG | 1 cut(s) | 479 |
| AfaI | GTAC | 3 cut(s) | 312, 318, 345 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 489, 586 |
| AgsI | TTSAA | 2 cut(s) | 779, 924 |
| AhlI | ACTAGT | 1 cut(s) | 803 |
| AleI | CACNNNNGTG | 1 cut(s) | 1248 |
| AluBI | AGCT | 3 cut(s) | 653, 833, 999 |
| AluI | AGCT | 3 cut(s) | 653, 833, 999 |
| Alw21I | GWGCWC | 2 cut(s) | 1001, 1033 |
| Alw26I | GTCTC | 2 cut(s) | 658, 835 |
| AlwI | GGATC | 2 cut(s) | 500, 702 |
| AoxI | GGCC | 3 cut(s) | 857, 1018, 1223 |
| ApeKI | GCWGC | 3 cut(s) | 1068, 1201, 1204 |
| ApoI | RAATTY | 2 cut(s) | 305, 975 |
| AspLEI | GCGC | 1 cut(s) | 717 |
| AspS9I | GGNCC | 1 cut(s) | 1018 |
| AsuC2I | CCSGG | 3 cut(s) | 984, 1022, 1045 |
| AsuHPI | GGTGA | 3 cut(s) | 28, 59, 972 |
| BaeGI | GKGCMC | 2 cut(s) | 461, 818 |
| BanII | GRGCYC | 1 cut(s) | 1001 |
| BbsI | GAAGAC | 3 cut(s) | 383, 786, 880 |
| Bbv12I | GWGCWC | 2 cut(s) | 1001, 1033 |
| BbvI | GCAGC | 3 cut(s) | 1080, 1213, 1216 |
| BccI | CCATC | 1 cut(s) | 286 |
| BceAI | ACGGC | 1 cut(s) | 881 |
| BcnI | CCSGG | 3 cut(s) | 984, 1022, 1045 |
| BcoDI | GTCTC | 2 cut(s) | 658, 835 |
| BcuI | ACTAGT | 1 cut(s) | 803 |
| BfaI | CTAG | 1 cut(s) | 804 |
| BfmI | CTRYAG | 1 cut(s) | 1219 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 865 |
| BisI | GCNGC | 5 cut(s) | 469, 1069, 1202, 1205, 1208 |
| BlsI | GCNGC | 5 cut(s) | 470, 1070, 1203, 1206, 1209 |
| Bme1390I | CCNGG | 3 cut(s) | 984, 1022, 1045 |
| BmgT120I | GGNCC | 1 cut(s) | 1018 |
| BmiI | GGNNCC | 2 cut(s) | 1019, 1124 |
| BmrFI | CCNGG | 3 cut(s) | 984, 1022, 1045 |
| BmsI | GCATC | 6 cut(s) | 432, 508, 626, 682, 923, 1175 |
| BpiI | GAAGAC | 3 cut(s) | 383, 786, 880 |
| BpuEI | CTTGAG | 2 cut(s) | 738, 1112 |
| BpuMI | CCSGG | 3 cut(s) | 984, 1022, 1045 |
| BsaBI | GATNNNNATC | 2 cut(s) | 889, 1155 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaJI | CCNNGG | 2 cut(s) | 769, 1021 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 138, 168 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 489, 586 |
| Bse1I | ACTGG | 2 cut(s) | 327, 483 |
| Bse3DI | GCAATG | 1 cut(s) | 1053 |
| Bse8I | GATNNNNATC | 2 cut(s) | 889, 1155 |
| BseDI | CCNNGG | 2 cut(s) | 769, 1021 |
| BseGI | GGATG | 3 cut(s) | 278, 796, 938 |
| BseJI | GATNNNNATC | 2 cut(s) | 889, 1155 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 489, 586 |
| BseMI | GCAATG | 1 cut(s) | 1053 |
| BseMII | CTCAG | 1 cut(s) | 911 |
| BseNI | ACTGG | 2 cut(s) | 327, 483 |
| BseRI | GAGGAG | 4 cut(s) | 197, 200, 575, 602 |
| BseSI | GKGCMC | 2 cut(s) | 461, 818 |
| BseXI | GCAGC | 3 cut(s) | 1080, 1213, 1216 |
| Bsh1285I | CGRYCG | 1 cut(s) | 247 |
| BshFI | GGCC | 3 cut(s) | 859, 1020, 1225 |
| BsiEI | CGRYCG | 1 cut(s) | 247 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1001, 1033 |
| BsiSI | CCGG | 4 cut(s) | 26, 983, 1021, 1045 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 489, 586 |
| BsmAI | GTCTC | 2 cut(s) | 658, 835 |
| BsmBI | CGTCTC | 1 cut(s) | 658 |
| BsmI | GAATGC | 2 cut(s) | 401, 425 |
| BsnI | GGCC | 3 cut(s) | 859, 1020, 1225 |
| Bsp1286I | GDGCHC | 4 cut(s) | 461, 818, 1001, 1033 |
| Bsp1407I | TGTACA | 1 cut(s) | 316 |
| Bsp143I | GATC | 4 cut(s) | 244, 505, 707, 890 |
| BspACI | CCGC | 5 cut(s) | 73, 79, 469, 1062, 1208 |
| BspANI | GGCC | 3 cut(s) | 859, 1020, 1225 |
| BspCNI | CTCAG | 1 cut(s) | 910 |
| BspLI | GGNNCC | 2 cut(s) | 1019, 1124 |
| BspPI | GGATC | 2 cut(s) | 500, 702 |
| BsrDI | GCAATG | 1 cut(s) | 1053 |
| BsrGI | TGTACA | 1 cut(s) | 316 |
| BsrI | ACTGG | 2 cut(s) | 327, 483 |
| BssECI | CCNNGG | 2 cut(s) | 769, 1021 |
| BssMI | GATC | 4 cut(s) | 244, 505, 707, 890 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| BssT1I | CCWWGG | 1 cut(s) | 769 |
| Bst4CI | ACNGT | 3 cut(s) | 388, 479, 492 |
| Bst6I | CTCTTC | 2 cut(s) | 579, 831 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 420, 623 |
| BstAUI | TGTACA | 1 cut(s) | 316 |
| BstC8I | GCNNGC | 4 cut(s) | 6, 466, 1011, 1060 |
| BstDEI | CTNAG | 2 cut(s) | 869, 897 |
| BstF5I | GGATG | 3 cut(s) | 278, 796, 938 |
| BstHHI | GCGC | 1 cut(s) | 717 |
| BstKTI | GATC | 4 cut(s) | 247, 508, 710, 893 |
| BstMAI | GTCTC | 2 cut(s) | 658, 835 |
| BstMBI | GATC | 4 cut(s) | 244, 505, 707, 890 |
| BstMCI | CGRYCG | 1 cut(s) | 247 |
| BstNSI | RCATGY | 1 cut(s) | 468 |
| BstSCI | CCNGG | 3 cut(s) | 982, 1020, 1043 |
| BstSFI | CTRYAG | 1 cut(s) | 1219 |
| BstSLI | GKGCMC | 2 cut(s) | 461, 818 |
| BstV1I | GCAGC | 3 cut(s) | 1080, 1213, 1216 |
| BstV2I | GAAGAC | 3 cut(s) | 383, 786, 880 |
| BstX2I | RGATCY | 1 cut(s) | 707 |
| BstYI | RGATCY | 1 cut(s) | 707 |
| BsuRI | GGCC | 3 cut(s) | 859, 1020, 1225 |
| BtsCI | GGATG | 3 cut(s) | 278, 796, 938 |
| BtsI | GCAGTG | 1 cut(s) | 346 |
| BtsIMutI | CAGTG | 4 cut(s) | 346, 475, 759, 936 |
| Cac8I | GCNNGC | 4 cut(s) | 6, 466, 1011, 1060 |
| CfoI | GCGC | 1 cut(s) | 717 |
| Cfr13I | GGNCC | 1 cut(s) | 1018 |
| CseI | GACGC | 1 cut(s) | 675 |
| Csp6I | GTAC | 3 cut(s) | 311, 317, 344 |
| CviAII | CATG | 5 cut(s) | 465, 581, 811, 1049, 1162 |
| CviQI | GTAC | 3 cut(s) | 311, 317, 344 |
| DdeI | CTNAG | 2 cut(s) | 869, 897 |
| DpnI | GATC | 4 cut(s) | 246, 507, 709, 892 |
| DpnII | GATC | 4 cut(s) | 244, 505, 707, 890 |
| DraIII | CACNNNGTG | 1 cut(s) | 479 |
| Eam1104I | CTCTTC | 2 cut(s) | 579, 831 |
| EarI | CTCTTC | 2 cut(s) | 579, 831 |
| Ecl136II | GAGCTC | 1 cut(s) | 999 |
| Eco130I | CCWWGG | 1 cut(s) | 769 |
| Eco24I | GRGCYC | 1 cut(s) | 1001 |
| Eco53kI | GAGCTC | 1 cut(s) | 999 |
| Eco57I | CTGAAG | 2 cut(s) | 813, 855 |
| EcoICRI | GAGCTC | 1 cut(s) | 999 |
| EcoT14I | CCWWGG | 1 cut(s) | 769 |
| EcoT22I | ATGCAT | 2 cut(s) | 425, 697 |
| EcoT38I | GRGCYC | 1 cut(s) | 1001 |
| ErhI | CCWWGG | 1 cut(s) | 769 |
| Esp3I | CGTCTC | 1 cut(s) | 658 |
| FaeI | CATG | 5 cut(s) | 468, 584, 814, 1052, 1165 |
| FatI | CATG | 5 cut(s) | 464, 580, 810, 1048, 1161 |
| FblI | GTMKAC | 1 cut(s) | 487 |
| Fnu4HI | GCNGC | 5 cut(s) | 469, 1069, 1202, 1205, 1208 |
| FokI | GGATG | 3 cut(s) | 265, 803, 945 |
| FriOI | GRGCYC | 1 cut(s) | 1001 |
| Fsp4HI | GCNGC | 5 cut(s) | 469, 1069, 1202, 1205, 1208 |
| FspBI | CTAG | 1 cut(s) | 804 |
| FspI | TGCGCA | 1 cut(s) | 716 |
| GlaI | GCGC | 1 cut(s) | 716 |
| GluI | GCNGC | 5 cut(s) | 469, 1069, 1202, 1205, 1208 |
| HaeIII | GGCC | 3 cut(s) | 859, 1020, 1225 |
| HapII | CCGG | 4 cut(s) | 26, 983, 1021, 1045 |
| HgaI | GACGC | 1 cut(s) | 675 |
| HhaI | GCGC | 1 cut(s) | 717 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin1II | CATG | 5 cut(s) | 468, 584, 814, 1052, 1165 |
| Hin6I | GCGC | 1 cut(s) | 715 |
| HinP1I | GCGC | 1 cut(s) | 715 |
| HincII | GTYRAC | 2 cut(s) | 259, 488 |
| HindII | GTYRAC | 2 cut(s) | 259, 488 |
| HindIII | AAGCTT | 1 cut(s) | 651 |
| HinfI | GANTC | 3 cut(s) | 147, 595, 1036 |
| HpaII | CCGG | 4 cut(s) | 26, 983, 1021, 1045 |
| HphI | GGTGA | 3 cut(s) | 28, 59, 972 |
| Hpy166II | GTNNAC | 3 cut(s) | 259, 346, 488 |
| Hpy188I | TCNGA | 6 cut(s) | 649, 726, 737, 1003, 1035, 1122 |
| Hpy188III | TCNNGA | 6 cut(s) | 93, 248, 542, 661, 1083, 1269 |
| Hpy8I | GTNNAC | 3 cut(s) | 259, 346, 488 |
| Hpy99I | CGWCG | 6 cut(s) | 44, 53, 212, 215, 218, 492 |
| HpyAV | CCTTC | 4 cut(s) | 732, 837, 912, 1127 |
| HpyCH4III | ACNGT | 3 cut(s) | 388, 479, 492 |
| HpyCH4IV | ACGT | 2 cut(s) | 213, 342 |
| HpyF3I | CTNAG | 2 cut(s) | 869, 897 |
| HpySE526I | ACGT | 2 cut(s) | 213, 342 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| Hsp92II | CATG | 5 cut(s) | 468, 584, 814, 1052, 1165 |
| HspAI | GCGC | 1 cut(s) | 715 |
| Kzo9I | GATC | 4 cut(s) | 244, 505, 707, 890 |
| LmnI | GCTCC | 2 cut(s) | 562, 996 |
| Lsp1109I | GCAGC | 3 cut(s) | 1080, 1213, 1216 |
| LweI | GCATC | 6 cut(s) | 432, 508, 626, 682, 923, 1175 |
| MaeI | CTAG | 1 cut(s) | 804 |
| MaeII | ACGT | 2 cut(s) | 213, 342 |
| MaeIII | GTNAC | 3 cut(s) | 806, 913, 1037 |
| MalI | GATC | 4 cut(s) | 246, 507, 709, 892 |
| MboI | GATC | 4 cut(s) | 244, 505, 707, 890 |
| MfeI | CAATTG | 1 cut(s) | 621 |
| MflI | RGATCY | 1 cut(s) | 707 |
| MhlI | GDGCHC | 4 cut(s) | 461, 818, 1001, 1033 |
| MluCI | AATT | 7 cut(s) | 305, 511, 525, 569, 621, 919, 975 |
| MlyI | GAGTC | 3 cut(s) | 156, 589, 1045 |
| MmeI | TCCRAC | 1 cut(s) | 661 |
| Mph1103I | ATGCAT | 2 cut(s) | 425, 697 |
| MseI | TTAA | 2 cut(s) | 372, 656 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1248 |
| MspA1I | CMGCKG | 1 cut(s) | 833 |
| MspI | CCGG | 4 cut(s) | 26, 983, 1021, 1045 |
| MspR9I | CCNGG | 3 cut(s) | 984, 1022, 1045 |
| MunI | CAATTG | 1 cut(s) | 621 |
| Mva1269I | GAATGC | 2 cut(s) | 401, 425 |
| NciI | CCSGG | 3 cut(s) | 984, 1022, 1045 |
| NdeII | GATC | 4 cut(s) | 244, 505, 707, 890 |
| NlaIII | CATG | 5 cut(s) | 468, 584, 814, 1052, 1165 |
| NlaIV | GGNNCC | 2 cut(s) | 1019, 1124 |
| NmeAIII | GCCGAG | 2 cut(s) | 986, 1251 |
| NmuCI | GTSAC | 2 cut(s) | 913, 1037 |
| NsbI | TGCGCA | 1 cut(s) | 716 |
| NsiI | ATGCAT | 2 cut(s) | 425, 697 |
| NspI | RCATGY | 1 cut(s) | 468 |
| OliI | CACNNNNGTG | 1 cut(s) | 1248 |
| PaeI | GCATGC | 1 cut(s) | 468 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 48, 213 |
| PctI | GAATGC | 2 cut(s) | 401, 425 |
| PflFI | GACNNNGTC | 1 cut(s) | 212 |
| PkrI | GCNGC | 5 cut(s) | 470, 1070, 1203, 1206, 1209 |
| Ple19I | CGATCG | 1 cut(s) | 247 |
| PleI | GAGTC | 3 cut(s) | 155, 589, 1044 |
| PpsI | GAGTC | 3 cut(s) | 155, 589, 1044 |
| Psp124BI | GAGCTC | 1 cut(s) | 1001 |
| PspN4I | GGNNCC | 2 cut(s) | 1019, 1124 |
| PspPI | GGNCC | 1 cut(s) | 1018 |
| PsuI | RGATCY | 1 cut(s) | 707 |
| PsyI | GACNNNGTC | 1 cut(s) | 212 |
| PvuI | CGATCG | 1 cut(s) | 247 |
| PvuII | CAGCTG | 1 cut(s) | 833 |
| RsaI | GTAC | 3 cut(s) | 312, 318, 345 |
| RsaNI | GTAC | 3 cut(s) | 311, 317, 344 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SacI | GAGCTC | 1 cut(s) | 1001 |
| SalI | GTCGAC | 1 cut(s) | 486 |
| SaqAI | TTAA | 2 cut(s) | 372, 656 |
| SatI | GCNGC | 5 cut(s) | 469, 1069, 1202, 1205, 1208 |
| Sau3AI | GATC | 4 cut(s) | 244, 505, 707, 890 |
| Sau96I | GGNCC | 1 cut(s) | 1018 |
| SchI | GAGTC | 3 cut(s) | 156, 589, 1045 |
| ScrFI | CCNGG | 3 cut(s) | 984, 1022, 1045 |
| SduI | GDGCHC | 4 cut(s) | 461, 818, 1001, 1033 |
| SfaNI | GCATC | 6 cut(s) | 432, 508, 626, 682, 923, 1175 |
| SfcI | CTRYAG | 1 cut(s) | 1219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SmlI | CTYRAG | 2 cut(s) | 753, 1127 |
| SmoI | CTYRAG | 2 cut(s) | 753, 1127 |
| SpeI | ACTAGT | 1 cut(s) | 803 |
| SphI | GCATGC | 1 cut(s) | 468 |
| Sse9I | AATT | 7 cut(s) | 305, 511, 525, 569, 621, 919, 975 |
| SsiI | CCGC | 5 cut(s) | 73, 79, 469, 1062, 1208 |
| SspI | AATATT | 1 cut(s) | 633 |
| SspMI | CTAG | 1 cut(s) | 804 |
| SstI | GAGCTC | 1 cut(s) | 1001 |
| StyD4I | CCNGG | 3 cut(s) | 982, 1020, 1043 |
| StyI | CCWWGG | 1 cut(s) | 769 |
| TaaI | ACNGT | 3 cut(s) | 388, 479, 492 |
| TaiI | ACGT | 2 cut(s) | 216, 345 |
| TaqI | TCGA | 9 cut(s) | 94, 216, 247, 426, 487, 598, 889, 1084, 1110 |
| TasI | AATT | 7 cut(s) | 305, 511, 525, 569, 621, 919, 975 |
| TatI | WGTACW | 2 cut(s) | 310, 316 |
| TauI | GCSGC | 2 cut(s) | 471, 1210 |
| Tru1I | TTAA | 2 cut(s) | 372, 656 |
| Tru9I | TTAA | 2 cut(s) | 372, 656 |
| TscAI | CASTG | 4 cut(s) | 353, 482, 766, 943 |
| TseFI | GTSAC | 2 cut(s) | 913, 1037 |
| TseI | GCWGC | 3 cut(s) | 1068, 1201, 1204 |
| Tsp45I | GTSAC | 2 cut(s) | 913, 1037 |
| TspDTI | ATGAA | 7 cut(s) | 120, 210, 267, 597, 807, 894, 1145 |
| TspGWI | ACGGA | 4 cut(s) | 285, 397, 863, 892 |
| TspRI | CASTG | 4 cut(s) | 353, 482, 766, 943 |
| Tth111I | GACNNNGTC | 1 cut(s) | 212 |
| XapI | RAATTY | 2 cut(s) | 305, 975 |
| XceI | RCATGY | 1 cut(s) | 468 |
| XmiI | GTMKAC | 1 cut(s) | 487 |
| XspI | CTAG | 1 cut(s) | 804 |
| ZraI | GACGTC | 1 cut(s) | 214 |
| Zsp2I | ATGCAT | 2 cut(s) | 425, 697 |