F-box-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52880 |
| fragaria_vesca | FvH4_7g30600 FvH4_7g30600 |
| malus_domestica | MD01G1211200.v1.1 |
| prunus_persica | Prupe.2G291600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G303600_v2.0.a1 Prupe.2G304000_v2.0.a1 |
| pyrus_communis | pycom01g22170 |
| rosa_chinensis | RchiOBHm_Chr1g0378761 RchiOBHm_Chr1g0379101 RchiOBHm_Chr1g0379281 RchiOBHm_Chr1g0379501 RchiOBHm_Chr1g0379511 |
| rosa_laevigata | RLG00000026397 |
| rosa_multiflora | Rmu_sc0031430.1_g000003 Rmu_sc0031430.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00280130 Rroxscaffold_4G00280150 |
| rosa_rugosa | Rorug01G0412300 Rorug01G0412400 |
| rosa_samantha | Rh1AG434800 Rh1AG435100 Rh1BG392600 Rh1CG405300 Rh1DG423400 |
| rosa_wichuraiana | Rw1G038010 Rw1G038020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 551 |
| AciI | CCGC | 4 cut(s) | 153, 201, 230, 551 |
| AcoI | YGGCCR | 1 cut(s) | 580 |
| AcsI | RAATTY | 2 cut(s) | 253, 269 |
| AcuI | CTGAAG | 2 cut(s) | 236, 355 |
| AgsI | TTSAA | 4 cut(s) | 91, 274, 481, 658 |
| AjnI | CCWGG | 2 cut(s) | 696, 766 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 712, 744 |
| AluBI | AGCT | 5 cut(s) | 35, 81, 128, 188, 407 |
| AluI | AGCT | 5 cut(s) | 35, 81, 128, 188, 407 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| Alw26I | GTCTC | 1 cut(s) | 420 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 191, 600 |
| Ama87I | CYCGRG | 1 cut(s) | 380 |
| AoxI | GGCC | 1 cut(s) | 580 |
| ApeKI | GCWGC | 1 cut(s) | 188 |
| ApoI | RAATTY | 2 cut(s) | 253, 269 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 762 |
| AsuC2I | CCSGG | 1 cut(s) | 584 |
| AsuHPI | GGTGA | 2 cut(s) | 102, 686 |
| AvaI | CYCGRG | 1 cut(s) | 380 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 580, 613 |
| BbsI | GAAGAC | 1 cut(s) | 155 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BbvCI | CCTCAGC | 1 cut(s) | 403 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BciT130I | CCWGG | 2 cut(s) | 698, 768 |
| BciVI | GTATCC | 1 cut(s) | 581 |
| BcnI | CCSGG | 1 cut(s) | 584 |
| BcoDI | GTCTC | 1 cut(s) | 420 |
| BfmI | CTRYAG | 1 cut(s) | 592 |
| BfuI | GTATCC | 1 cut(s) | 581 |
| BglII | AGATCT | 1 cut(s) | 575 |
| BisI | GCNGC | 3 cut(s) | 189, 201, 552 |
| BlsI | GCNGC | 3 cut(s) | 190, 202, 553 |
| Bme1390I | CCNGG | 3 cut(s) | 584, 698, 768 |
| BmeT110I | CYCGRG | 1 cut(s) | 380 |
| BmiI | GGNNCC | 1 cut(s) | 428 |
| BmrFI | CCNGG | 3 cut(s) | 584, 698, 768 |
| BpiI | GAAGAC | 1 cut(s) | 155 |
| BpmI | CTGGAG | 1 cut(s) | 541 |
| Bpu10I | CCTNAGC | 1 cut(s) | 403 |
| BpuEI | CTTGAG | 2 cut(s) | 393, 649 |
| BpuMI | CCSGG | 1 cut(s) | 584 |
| BsaAI | YACGTR | 1 cut(s) | 793 |
| BsaJI | CCNNGG | 1 cut(s) | 583 |
| Bse1I | ACTGG | 1 cut(s) | 524 |
| Bse3DI | GCAATG | 1 cut(s) | 76 |
| BseBI | CCWGG | 2 cut(s) | 698, 768 |
| BseDI | CCNNGG | 1 cut(s) | 583 |
| BseMI | GCAATG | 1 cut(s) | 76 |
| BseMII | CTCAG | 1 cut(s) | 417 |
| BseNI | ACTGG | 1 cut(s) | 524 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| BseYI | CCCAGC | 1 cut(s) | 715 |
| Bsh1236I | CGCG | 1 cut(s) | 551 |
| BshFI | GGCC | 1 cut(s) | 582 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BsiHKCI | CYCGRG | 1 cut(s) | 380 |
| BsiSI | CCGG | 1 cut(s) | 583 |
| BsmAI | GTCTC | 1 cut(s) | 420 |
| BsnI | GGCC | 1 cut(s) | 582 |
| BsoBI | CYCGRG | 1 cut(s) | 380 |
| Bsp1286I | GDGCHC | 1 cut(s) | 237 |
| Bsp143I | GATC | 2 cut(s) | 132, 575 |
| BspACI | CCGC | 4 cut(s) | 153, 201, 230, 551 |
| BspANI | GGCC | 1 cut(s) | 582 |
| BspCNI | CTCAG | 1 cut(s) | 416 |
| BspFNI | CGCG | 1 cut(s) | 551 |
| BspLI | GGNNCC | 1 cut(s) | 428 |
| BspMAI | CTGCAG | 1 cut(s) | 596 |
| BspQI | GCTCTTC | 1 cut(s) | 212 |
| BsrDI | GCAATG | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 524 |
| BssECI | CCNNGG | 1 cut(s) | 583 |
| BssMI | GATC | 2 cut(s) | 132, 575 |
| Bst2UI | CCWGG | 2 cut(s) | 698, 768 |
| Bst4CI | ACNGT | 2 cut(s) | 314, 602 |
| Bst6I | CTCTTC | 1 cut(s) | 212 |
| BstBAI | YACGTR | 1 cut(s) | 793 |
| BstC8I | GCNNGC | 2 cut(s) | 67, 279 |
| BstDEI | CTNAG | 3 cut(s) | 77, 394, 403 |
| BstFNI | CGCG | 1 cut(s) | 551 |
| BstKTI | GATC | 2 cut(s) | 135, 578 |
| BstMAI | GTCTC | 1 cut(s) | 420 |
| BstMBI | GATC | 2 cut(s) | 132, 575 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 197, 287, 548 |
| BstNI | CCWGG | 2 cut(s) | 698, 768 |
| BstSCI | CCNGG | 3 cut(s) | 582, 696, 766 |
| BstSFI | CTRYAG | 1 cut(s) | 592 |
| BstUI | CGCG | 1 cut(s) | 551 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| BstV2I | GAAGAC | 1 cut(s) | 155 |
| BstX2I | RGATCY | 1 cut(s) | 575 |
| BstYI | RGATCY | 1 cut(s) | 575 |
| BsuI | GTATCC | 1 cut(s) | 581 |
| BsuRI | GGCC | 1 cut(s) | 582 |
| BtgZI | GCGATG | 1 cut(s) | 532 |
| Cac8I | GCNNGC | 2 cut(s) | 67, 279 |
| CaiI | CAGNNNCTG | 2 cut(s) | 191, 600 |
| CsiI | ACCWGGT | 1 cut(s) | 696 |
| CviAII | CATG | 1 cut(s) | 440 |
| DdeI | CTNAG | 3 cut(s) | 77, 394, 403 |
| DpnI | GATC | 2 cut(s) | 134, 577 |
| DpnII | GATC | 2 cut(s) | 132, 575 |
| EaeI | YGGCCR | 1 cut(s) | 580 |
| Eam1104I | CTCTTC | 1 cut(s) | 212 |
| EarI | CTCTTC | 1 cut(s) | 212 |
| Eco32I | GATATC | 2 cut(s) | 355, 387 |
| Eco57I | CTGAAG | 2 cut(s) | 236, 355 |
| Eco88I | CYCGRG | 1 cut(s) | 380 |
| EcoRI | GAATTC | 1 cut(s) | 269 |
| EcoRII | CCWGG | 2 cut(s) | 696, 766 |
| EcoRV | GATATC | 2 cut(s) | 355, 387 |
| FaeI | CATG | 1 cut(s) | 443 |
| FaiI | YATR | 8 cut(s) | 86, 329, 335, 441, 503, 544, 686, 778 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 342, 374 |
| FatI | CATG | 1 cut(s) | 439 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 201, 552 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 201, 552 |
| GluI | GCNGC | 3 cut(s) | 189, 201, 552 |
| GsaI | CCCAGC | 1 cut(s) | 719 |
| GsuI | CTGGAG | 1 cut(s) | 541 |
| HaeIII | GGCC | 1 cut(s) | 582 |
| HapII | CCGG | 1 cut(s) | 583 |
| Hin1II | CATG | 1 cut(s) | 443 |
| HincII | GTYRAC | 1 cut(s) | 706 |
| HindII | GTYRAC | 1 cut(s) | 706 |
| HindIII | AAGCTT | 2 cut(s) | 33, 126 |
| HinfI | GANTC | 4 cut(s) | 91, 496, 605, 746 |
| HpaII | CCGG | 1 cut(s) | 583 |
| HphI | GGTGA | 2 cut(s) | 102, 686 |
| Hpy166II | GTNNAC | 1 cut(s) | 706 |
| Hpy188I | TCNGA | 5 cut(s) | 511, 565, 639, 733, 751 |
| Hpy188III | TCNNGA | 4 cut(s) | 170, 214, 382, 493 |
| Hpy8I | GTNNAC | 1 cut(s) | 706 |
| HpyAV | CCTTC | 3 cut(s) | 218, 348, 482 |
| HpyCH4III | ACNGT | 2 cut(s) | 314, 602 |
| HpyCH4IV | ACGT | 1 cut(s) | 792 |
| HpyCH4V | TGCA | 3 cut(s) | 69, 505, 594 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 197, 287, 548 |
| HpyF3I | CTNAG | 3 cut(s) | 77, 394, 403 |
| HpySE526I | ACGT | 1 cut(s) | 792 |
| Hsp92II | CATG | 1 cut(s) | 443 |
| Kzo9I | GATC | 2 cut(s) | 132, 575 |
| LguI | GCTCTTC | 1 cut(s) | 212 |
| LmnI | GCTCC | 2 cut(s) | 86, 240 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| MabI | ACCWGGT | 1 cut(s) | 696 |
| MaeII | ACGT | 1 cut(s) | 792 |
| MaeIII | GTNAC | 1 cut(s) | 596 |
| MalI | GATC | 2 cut(s) | 134, 577 |
| MboI | GATC | 2 cut(s) | 132, 575 |
| MflI | RGATCY | 1 cut(s) | 575 |
| MhlI | GDGCHC | 1 cut(s) | 237 |
| MluCI | AATT | 4 cut(s) | 253, 269, 464, 556 |
| MnlI | CCTC | 7 cut(s) | 158, 291, 310, 389, 412, 559, 692 |
| MroXI | GAANNNNTTC | 1 cut(s) | 762 |
| MseI | TTAA | 1 cut(s) | 534 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 583 |
| MspR9I | CCNGG | 3 cut(s) | 584, 698, 768 |
| MvaI | CCWGG | 2 cut(s) | 698, 768 |
| MvnI | CGCG | 1 cut(s) | 551 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 197, 287, 548 |
| NciI | CCSGG | 1 cut(s) | 584 |
| NdeII | GATC | 2 cut(s) | 132, 575 |
| NlaIII | CATG | 1 cut(s) | 443 |
| NlaIV | GGNNCC | 1 cut(s) | 428 |
| PaeR7I | CTCGAG | 1 cut(s) | 380 |
| PciSI | GCTCTTC | 1 cut(s) | 212 |
| PdmI | GAANNNNTTC | 1 cut(s) | 762 |
| PfeI | GAWTC | 4 cut(s) | 91, 496, 605, 746 |
| PfoI | TCCNGGA | 1 cut(s) | 766 |
| PkrI | GCNGC | 3 cut(s) | 190, 202, 553 |
| Ppu21I | YACGTR | 1 cut(s) | 793 |
| Psp6I | CCWGG | 2 cut(s) | 696, 766 |
| PspFI | CCCAGC | 1 cut(s) | 715 |
| PspGI | CCWGG | 2 cut(s) | 696, 766 |
| PspN4I | GGNNCC | 1 cut(s) | 428 |
| PstI | CTGCAG | 1 cut(s) | 596 |
| PstNI | CAGNNNCTG | 2 cut(s) | 191, 600 |
| PsuI | RGATCY | 1 cut(s) | 575 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| SapI | GCTCTTC | 1 cut(s) | 212 |
| SaqAI | TTAA | 1 cut(s) | 534 |
| SatI | GCNGC | 3 cut(s) | 189, 201, 552 |
| Sau3AI | GATC | 2 cut(s) | 132, 575 |
| ScrFI | CCNGG | 3 cut(s) | 584, 698, 768 |
| SduI | GDGCHC | 1 cut(s) | 237 |
| SexAI | ACCWGGT | 1 cut(s) | 696 |
| SfcI | CTRYAG | 1 cut(s) | 592 |
| Sfr274I | CTCGAG | 1 cut(s) | 380 |
| SlaI | CTCGAG | 1 cut(s) | 380 |
| SmlI | CTYRAG | 3 cut(s) | 380, 408, 628 |
| SmoI | CTYRAG | 3 cut(s) | 380, 408, 628 |
| Sse9I | AATT | 4 cut(s) | 253, 269, 464, 556 |
| SsiI | CCGC | 4 cut(s) | 153, 201, 230, 551 |
| StyD4I | CCNGG | 3 cut(s) | 582, 696, 766 |
| TaaI | ACNGT | 2 cut(s) | 314, 602 |
| TaiI | ACGT | 1 cut(s) | 795 |
| TaqI | TCGA | 2 cut(s) | 381, 678 |
| TasI | AATT | 4 cut(s) | 253, 269, 464, 556 |
| TauI | GCSGC | 2 cut(s) | 203, 554 |
| TfiI | GAWTC | 4 cut(s) | 91, 496, 605, 746 |
| Tru1I | TTAA | 1 cut(s) | 534 |
| Tru9I | TTAA | 1 cut(s) | 534 |
| TseI | GCWGC | 1 cut(s) | 188 |
| TspDTI | ATGAA | 5 cut(s) | 17, 87, 549, 753, 771 |
| XapI | RAATTY | 2 cut(s) | 253, 269 |
| XhoI | CTCGAG | 1 cut(s) | 380 |
| XmnI | GAANNNNTTC | 1 cut(s) | 762 |