AT5G55670

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006731
Physical Location & Seq
Reverse (-)
22543728 .. 22547062
3335 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G55670.2

Sequence Viewer

Length: 2133 bp
ATGGATGAGGGAGATGGGAGAGATCAGATGGATCAATTTCATCAAAACGAGGCGATATCTGCCGTTGCTGACGACGGGTTTATGGCGGAGGAAGAGGATGATGATTATGAGGATCTTTATAACGACGTTAATGTTGGAGAAGGGTTTCTTCAGTCTATGAAAAAGAACGACGAAGCGGGATCTAGAAACGAGGAAAAGGAGAAGGTTAATATGGAGGAGGAAGATAGGGTTGAACCAGTTTTAGGTGAAGCTGAGGTTTCGATTTCGATACCTGGTTTGGTTGGTGAGAGCGTTGAGAAAGAAGCAGAAGCAGAGTCAGGAGGAGGAGGAAGTGGAAGTGGTACTGATGTGGTGGTCGCTTCTAGTGGATATGGAGCTCAGGAGGTTAAGGTAAGCGATGTTAGCCAGGAGATTCCTGGTGGAATTGGTACTGGTACTGGAGGTGGGCTGAGAGTTGAGCTAGGGCAAGCTTCTAATCGGGCTAATGATCTCGAGGCACCTAGAGGGAATAATATTTCGCAGGGTCTCTTGCCACCACCGCCTGTGTTGGGGAATAACGAGAATTTGATGAGACCTGTGATGGGTAATGTTAATGGCGGGATTCCTCCTGGACCTGGTAGTAACATGGTTGGGAACGGAGCTAATATCGCTATGCCTGGTGTTGTTGGCGGGGGAACTGGTGGTGGAGGAGGCGGTGGAGCTTTTCTTTTCGTAGGGGATCTGCATTGGTGGACAACTGATGCGGAGCTTGAGGCAGAGTTGTGCAAGTATGGTGCAGTGAAGGAGGTTAAGTTCTTTGATGAGAAAGCTAGTGGGAAGTCGAAAGGGTATTGTCAAGTAGAGTTCTATGATCCTGTGGCAGCTTCGGCTTGCAAAGATGCGCTGAATGGGTATCCATTCAACGGTAGGCCTTGTGTTGTTGAGTATGCGTCCCCATATTCGGTTAAGAGAATGGGAGAGGCACAGGTGAATAGGACCCAACAGGCTCAATCTGTAATTGCACAAGCTAAGAGAGGAGGGCCTGCTGATCCTCCAAGTAAACCACTCGTGGCCAACAACAACAATAACAACAACAACAACGCCATTGGCGGGAATTTCCAAGGTGGGGAAAATAGAGGATTTGGTAGAGGTAATTGGGGTAGAGGCAATGCTCAAGGAATGGGTGGTAGAGGACCAGGTGGTCCAATGAGGAATAGGCCTAATGGGATGGGTGGAAGAGGTTTGATGGGTAATGGTGGGTTTGGTCAAGGAATGGGTACAGGGCCTCCTATGAATATGATGCATCAACCAATGATGGGGCAAGGGTTTGAACAAGCTTTTGGTGGACCGATGGCGAGAATGGGAGGGTATGGAGGATTCCCTGGGGCTCCAGGTCCACAGTTTCCTGGGCTTTTGTCATCATTCCCTCCTGTAGGAGGAGTTGGTTTACCTGGAGTGGCACCTCATGTGAATCCAGCATTTTTTGGACGAGGGATGCCGATGAATGGAATGGGAATGATGCCTAATGCTGGTGTTGATGGAGGGCATAATATGGGAATGTGGGATCCTAACAGTGGAGGGTGGGGTGCTGGTGAAGATCTGGGTAGTGGAAGAGCTGCGGAATCGAGTTATGGGGAGGAAGCTGCATCTGATCATCAGTATGGAGAGGTTAATCACGAAAGAGGGGCTCGTCCAAATCCTGTGAAGGAAAAAGAAAGAGCTTCAGAAAGGGAATGGTCTGGTTCATCTGATAGAAGGAATCGTGAGGATAAAGATGCTGGTTATGAAAGGGACATACCGAGGGAGAAAGATGTTGGTCACGGTTATGATATGCCAGAGAGAAGGCATCGTGATGATAGAGACACCGGTCGTGAGCGTGAGAGGGAACATCATCATAAGGATCGTGAACGCTCCAGAGAACATGTTCGTGACAGAGAAAGGGAAAGGGAGAGGGATCGTCATAGAGAAGAACGAGAACGATATGGTGGTGATCATCGTACTAGACACAGGGACGAACCTGAACATGATGAGGAATGGAACAGAGGCCGATCATCCAGAGGACACAACAAATCGCGGTTGTCTCGCGAGGATAACCATCGCTCAAAATCAAGGGATACTGATTATGGGAAAAGAAGGCGGCTTACTACTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

710

Amino Acids

76.43

Weight (kDa)

5.32

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 236 - 305 1.3e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 120
AasI GACNNNNNNGTC 1 cut(s) 1179
AccB1I GGYRCC 2 cut(s) 496, 1438
AccII CGCG 2 cut(s) 2053, 2064
AcoI YGGCCR 1 cut(s) 1050
AcsI RAATTY 2 cut(s) 562, 1093
AcuI CTGAAG 2 cut(s) 134, 1686
AfaI GTAC 5 cut(s) 343, 430, 436, 1258, 1978
AflIII ACRYGT 1 cut(s) 1900
AgeI ACCGGT 1 cut(s) 1844
AgsI TTSAA 3 cut(s) 233, 901, 1310
AjuI GAANNNNNNNTTGG 2 cut(s) 1302, 1334
AloI GAACNNNNNNTCC 2 cut(s) 776, 808
Alw21I GWGCWC 1 cut(s) 379
Alw26I GTCTC 4 cut(s) 530, 565, 1833, 2064
Ama87I CYCGRG 1 cut(s) 491
AoxI GGCC 6 cut(s) 908, 1019, 1050, 1196, 1262, 2023
ApeKI GCWGC 3 cut(s) 860, 1595, 1622
ApoI RAATTY 2 cut(s) 562, 1093
AsiGI ACCGGT 1 cut(s) 1844
Asp700I GAANNNNTTC 2 cut(s) 144, 1902
AspLEI GCGC 1 cut(s) 883
AspS9I GGNCC 8 cut(s) 611, 975, 1019, 1172, 1181, 1262, 1325, 1373
AsuHPI GGTGA 5 cut(s) 257, 296, 979, 1583, 1979
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 6 cut(s) 611, 975, 1172, 1181, 1325, 1373
BaeI ACNNNNGTAYC 2 cut(s) 333, 366
BalI TGGCCA 1 cut(s) 1052
BamHI GGATCC 1 cut(s) 1543
BanI GGYRCC 2 cut(s) 496, 1438
BanII GRGCYC 3 cut(s) 379, 1369, 1669
BarI GAAGNNNNNNTAC 1 cut(s) 2104
BauI CACGAG 1 cut(s) 1046
Bbv12I GWGCWC 1 cut(s) 379
BbvCI CCTCAGC 1 cut(s) 252
BbvI GCAGC 3 cut(s) 872, 1582, 1609
BccI CCATC 9 cut(s) 8, 22, 574, 1201, 1219, 1288, 1324, 1511, 2082
BceAI ACGGC 1 cut(s) 47
BciVI GTATCC 2 cut(s) 903, 2086
BclI TGATCA 2 cut(s) 1630, 1969
BcoDI GTCTC 4 cut(s) 530, 565, 1833, 2064
BfaI CTAG 6 cut(s) 183, 363, 461, 501, 810, 1980
BfmI CTRYAG 1 cut(s) 1410
BfuI GTATCC 2 cut(s) 903, 2086
BglII AGATCT 1 cut(s) 1576
BisI GCNGC 4 cut(s) 861, 1596, 1623, 2117
BlsI GCNGC 4 cut(s) 862, 1597, 1624, 2118
Bme18I GGWCC 6 cut(s) 611, 975, 1172, 1181, 1325, 1373
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 8 cut(s) 611, 975, 1019, 1172, 1181, 1262, 1325, 1373
BmiI GGNNCC 5 cut(s) 498, 977, 1368, 1440, 1545
BmsI GCATC 9 cut(s) 730, 868, 1269, 1291, 1464, 1488, 1634, 1744, 1834
BoxI GACNNNNGTC 1 cut(s) 1845
BpmI CTGGAG 4 cut(s) 459, 1353, 1452, 1876
Bpu10I CCTNAGC 2 cut(s) 252, 378
BpuEI CTTGAG 2 cut(s) 770, 1137
BsaBI GATNNNNATC 1 cut(s) 2073
BsaI GGTCTC 2 cut(s) 530, 565
BsaJI CCNNGG 5 cut(s) 1099, 1360, 1361, 1385, 1778
BsaWI WCCGGW 1 cut(s) 1844
BsaXI ACNNNNNCTCC 4 cut(s) 776, 806, 1249, 1279
Bse118I RCCGGY 1 cut(s) 1844
Bse1I ACTGG 4 cut(s) 236, 436, 442, 682
Bse3DI GCAATG 1 cut(s) 1153
Bse8I GATNNNNATC 1 cut(s) 2073
BseDI CCNNGG 5 cut(s) 1099, 1360, 1361, 1385, 1778
BseGI GGATG 5 cut(s) 10, 103, 1212, 1479, 2030
BseJI GATNNNNATC 1 cut(s) 2073
BseMI GCAATG 1 cut(s) 1153
BseMII CTCAG 3 cut(s) 243, 392, 440
BseNI ACTGG 4 cut(s) 236, 436, 442, 682
BseRI GAGGAG 6 cut(s) 230, 336, 339, 702, 1029, 1431
BseXI GCAGC 3 cut(s) 872, 1582, 1609
BsgI GTGCAG 1 cut(s) 795
Bsh1236I CGCG 2 cut(s) 2053, 2064
Bsh1285I CGRYCG 1 cut(s) 1849
BshFI GGCC 6 cut(s) 910, 1021, 1052, 1198, 1264, 2025
BshNI GGYRCC 2 cut(s) 496, 1438
BshTI ACCGGT 1 cut(s) 1844
BsiEI CGRYCG 1 cut(s) 1849
BsiHKAI GWGCWC 1 cut(s) 379
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 1 cut(s) 1845
BslFI GGGAC 3 cut(s) 916, 1784, 2003
BsmAI GTCTC 4 cut(s) 530, 565, 1833, 2064
BsmFI GGGAC 3 cut(s) 916, 1784, 2003
BsnI GGCC 6 cut(s) 910, 1021, 1052, 1198, 1264, 2025
Bso31I GGTCTC 2 cut(s) 530, 565
BsoBI CYCGRG 1 cut(s) 491
Bsp1286I GDGCHC 3 cut(s) 379, 1369, 1669
Bsp68I TCGCGA 1 cut(s) 2064
BspANI GGCC 6 cut(s) 910, 1021, 1052, 1198, 1264, 2025
BspCNI CTCAG 3 cut(s) 244, 391, 441
BspFNI CGCG 2 cut(s) 2053, 2064
BspLI GGNNCC 5 cut(s) 498, 977, 1368, 1440, 1545
BspQI GCTCTTC 1 cut(s) 1585
BspT107I GGYRCC 2 cut(s) 496, 1438
BspTNI GGTCTC 2 cut(s) 530, 565
BsrDI GCAATG 1 cut(s) 1153
BsrFI RCCGGY 1 cut(s) 1844
BsrI ACTGG 4 cut(s) 236, 436, 442, 682
BssAI RCCGGY 1 cut(s) 1844
BssECI CCNNGG 5 cut(s) 1099, 1360, 1361, 1385, 1778
BssSI CACGAG 1 cut(s) 1046
BssT1I CCWWGG 1 cut(s) 1099
Bst2BI CACGAG 1 cut(s) 1046
Bst4CI ACNGT 4 cut(s) 905, 1380, 1553, 1802
Bst6I CTCTTC 3 cut(s) 87, 1210, 1585
BstC8I GCNNGC 3 cut(s) 468, 871, 1023
BstDEI CTNAG 4 cut(s) 252, 378, 449, 1008
BstENI CCTNNNNNAGG 2 cut(s) 1410, 1413
BstF5I GGATG 5 cut(s) 10, 103, 1212, 1479, 2030
BstFNI CGCG 2 cut(s) 2053, 2064
BstHHI GCGC 1 cut(s) 883
BstMAI GTCTC 4 cut(s) 530, 565, 1833, 2064
BstMCI CGRYCG 1 cut(s) 1849
BstMWI GCNNNNNNNGC 5 cut(s) 59, 402, 538, 647, 866
BstNSI RCATGY 1 cut(s) 1904
BstPAI GACNNNNGTC 1 cut(s) 1845
BstSFI CTRYAG 1 cut(s) 1410
BstUI CGCG 2 cut(s) 2053, 2064
BstV1I GCAGC 3 cut(s) 872, 1582, 1609
BstX2I RGATCY 5 cut(s) 112, 179, 718, 1543, 1576
BstYI RGATCY 5 cut(s) 112, 179, 718, 1543, 1576
BsuI GTATCC 2 cut(s) 903, 2086
BsuRI GGCC 6 cut(s) 910, 1021, 1052, 1198, 1264, 2025
BtgZI GCGATG 2 cut(s) 411, 2060
BtsCI GGATG 5 cut(s) 10, 103, 1212, 1479, 2030
BtsI GCAGTG 1 cut(s) 783
BtsIMutI CAGTG 2 cut(s) 783, 1558
BtuMI TCGCGA 1 cut(s) 2064
Cac8I GCNNGC 3 cut(s) 468, 871, 1023
CfoI GCGC 1 cut(s) 883
Cfr10I RCCGGY 1 cut(s) 1844
Cfr13I GGNCC 8 cut(s) 611, 975, 1019, 1172, 1181, 1262, 1325, 1373
CseI GACGC 1 cut(s) 918
CsiI ACCWGGT 3 cut(s) 271, 613, 1174
Csp6I GTAC 5 cut(s) 342, 429, 435, 1257, 1977
CspAI ACCGGT 1 cut(s) 1844
CviAII CATG 4 cut(s) 625, 1445, 1901, 2003
CviQI GTAC 5 cut(s) 342, 429, 435, 1257, 1977
DdeI CTNAG 4 cut(s) 252, 378, 449, 1008
DrdI GACNNNNNNGTC 1 cut(s) 1179
DseDI GACNNNNNNGTC 1 cut(s) 1179
EaeI YGGCCR 1 cut(s) 1050
Eam1104I CTCTTC 3 cut(s) 87, 1210, 1585
EarI CTCTTC 3 cut(s) 87, 1210, 1585
EciI GGCGGA 1 cut(s) 101
Ecl136II GAGCTC 1 cut(s) 377
Eco130I CCWWGG 1 cut(s) 1099
Eco147I AGGCCT 2 cut(s) 910, 1198
Eco24I GRGCYC 3 cut(s) 379, 1369, 1669
Eco31I GGTCTC 2 cut(s) 530, 565
Eco32I GATATC 1 cut(s) 57
Eco47I GGWCC 6 cut(s) 611, 975, 1172, 1181, 1325, 1373
Eco53kI GAGCTC 1 cut(s) 377
Eco57I CTGAAG 2 cut(s) 134, 1686
Eco88I CYCGRG 1 cut(s) 491
EcoICRI GAGCTC 1 cut(s) 377
EcoNI CCTNNNNNAGG 2 cut(s) 1410, 1413
EcoO109I RGGNCCY 3 cut(s) 975, 1019, 1262
EcoRV GATATC 1 cut(s) 57
EcoT14I CCWWGG 1 cut(s) 1099
EcoT22I ATGCAT 1 cut(s) 1284
EcoT38I GRGCYC 3 cut(s) 379, 1369, 1669
ErhI CCWWGG 1 cut(s) 1099
FaeI CATG 4 cut(s) 628, 1448, 1904, 2006
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FaqI GGGAC 3 cut(s) 916, 1784, 2003
FatI CATG 4 cut(s) 624, 1444, 1900, 2002
FauI CCCGC 4 cut(s) 169, 590, 662, 1082
FbaI TGATCA 2 cut(s) 1630, 1969
Fnu4HI GCNGC 4 cut(s) 861, 1596, 1623, 2117
FokI GGATG 5 cut(s) 17, 110, 1219, 1486, 2017
FriOI GRGCYC 3 cut(s) 379, 1369, 1669
Fsp4HI GCNGC 4 cut(s) 861, 1596, 1623, 2117
FspBI CTAG 6 cut(s) 183, 363, 461, 501, 810, 1980
GlaI GCGC 1 cut(s) 882
GluI GCNGC 4 cut(s) 861, 1596, 1623, 2117
GsuI CTGGAG 4 cut(s) 459, 1353, 1452, 1876
HaeIII GGCC 6 cut(s) 910, 1021, 1052, 1198, 1264, 2025
HapII CCGG 1 cut(s) 1845
HgaI GACGC 1 cut(s) 918
HhaI GCGC 1 cut(s) 883
Hin1II CATG 4 cut(s) 628, 1448, 1904, 2006
Hin6I GCGC 1 cut(s) 881
HinP1I GCGC 1 cut(s) 881
HindIII AAGCTT 2 cut(s) 468, 1314
HinfI GANTC 7 cut(s) 314, 412, 601, 1356, 1450, 1601, 1738
HpaII CCGG 1 cut(s) 1845
HphI GGTGA 5 cut(s) 257, 296, 979, 1583, 1979
Hpy166II GTNNAC 6 cut(s) 732, 1040, 1325, 1376, 1427, 1886
Hpy188I TCNGA 4 cut(s) 27, 1630, 1705, 1729
Hpy8I GTNNAC 6 cut(s) 732, 1040, 1325, 1376, 1427, 1886
Hpy99I CGWCG 3 cut(s) 77, 128, 173
HpyAV CCTTC 7 cut(s) 134, 196, 775, 1678, 1728, 1815, 2106
HpyCH4III ACNGT 4 cut(s) 905, 1380, 1553, 1802
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 7 cut(s) 724, 765, 776, 873, 1001, 1282, 1625
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 402, 538, 647, 866
HpyF3I CTNAG 4 cut(s) 252, 378, 449, 1008
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 4 cut(s) 628, 1448, 1904, 2006
HspAI GCGC 1 cut(s) 881
Ksp22I TGATCA 2 cut(s) 1630, 1969
LguI GCTCTTC 1 cut(s) 1585
LmnI GCTCC 6 cut(s) 374, 638, 698, 745, 1372, 1895
Lsp1109I GCAGC 3 cut(s) 872, 1582, 1609
LweI GCATC 9 cut(s) 730, 868, 1269, 1291, 1464, 1488, 1634, 1744, 1834
MabI ACCWGGT 3 cut(s) 271, 613, 1174
MaeI CTAG 6 cut(s) 183, 363, 461, 501, 810, 1980
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 3 cut(s) 620, 1796, 1907
MboII GAAGA 7 cut(s) 104, 140, 233, 1227, 1586, 1602, 1958
MflI RGATCY 5 cut(s) 112, 179, 718, 1543, 1576
MhlI GDGCHC 3 cut(s) 379, 1369, 1669
MlsI TGGCCA 1 cut(s) 1052
MluCI AATT 6 cut(s) 35, 423, 562, 996, 1093, 1132
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 1 cut(s) 115
Mox20I TGGCCA 1 cut(s) 1052
Mph1103I ATGCAT 1 cut(s) 1284
MroXI GAANNNNTTC 2 cut(s) 144, 1902
MscI TGGCCA 1 cut(s) 1052
MseI TTAA 7 cut(s) 129, 207, 387, 591, 789, 945, 1650
MslI CAYNNNNRTG 4 cut(s) 1638, 1803, 1830, 1905
Msp20I TGGCCA 1 cut(s) 1052
MspI CCGG 1 cut(s) 1845
MvnI CGCG 2 cut(s) 2053, 2064
MwoI GCNNNNNNNGC 5 cut(s) 59, 402, 538, 647, 866
NlaIII CATG 4 cut(s) 628, 1448, 1904, 2006
NlaIV GGNNCC 5 cut(s) 498, 977, 1368, 1440, 1545
NmuCI GTSAC 2 cut(s) 1796, 1907
NruI TCGCGA 1 cut(s) 2064
NsiI ATGCAT 1 cut(s) 1284
NspI RCATGY 1 cut(s) 1904
PaeR7I CTCGAG 1 cut(s) 491
PasI CCCWGGG 1 cut(s) 1361
PceI AGGCCT 2 cut(s) 910, 1198
PciI ACATGT 1 cut(s) 1900
PciSI GCTCTTC 1 cut(s) 1585
PdmI GAANNNNTTC 2 cut(s) 144, 1902
PfeI GAWTC 6 cut(s) 412, 601, 1356, 1450, 1601, 1738
PfoI TCCNGGA 1 cut(s) 607
PinAI ACCGGT 1 cut(s) 1844
PkrI GCNGC 4 cut(s) 862, 1597, 1624, 2118
PleI GAGTC 1 cut(s) 322
PpsI GAGTC 1 cut(s) 322
PpuMI RGGWCCY 1 cut(s) 975
PscI ACATGT 1 cut(s) 1900
PshAI GACNNNNGTC 1 cut(s) 1845
PsiI TTATAA 1 cut(s) 120
Psp124BI GAGCTC 1 cut(s) 379
Psp5II RGGWCCY 1 cut(s) 975
PspN4I GGNNCC 5 cut(s) 498, 977, 1368, 1440, 1545
PspPI GGNCC 8 cut(s) 611, 975, 1019, 1172, 1181, 1262, 1325, 1373
PspPPI RGGWCCY 1 cut(s) 975
PsuI RGATCY 5 cut(s) 112, 179, 718, 1543, 1576
RruI TCGCGA 1 cut(s) 2064
RsaI GTAC 5 cut(s) 343, 430, 436, 1258, 1978
RsaNI GTAC 5 cut(s) 342, 429, 435, 1257, 1977
RseI CAYNNNNRTG 4 cut(s) 1638, 1803, 1830, 1905
SacI GAGCTC 1 cut(s) 379
SapI GCTCTTC 1 cut(s) 1585
SaqAI TTAA 7 cut(s) 129, 207, 387, 591, 789, 945, 1650
SatI GCNGC 4 cut(s) 861, 1596, 1623, 2117
Sau96I GGNCC 8 cut(s) 611, 975, 1019, 1172, 1181, 1262, 1325, 1373
SchI GAGTC 1 cut(s) 323
SduI GDGCHC 3 cut(s) 379, 1369, 1669
SexAI ACCWGGT 3 cut(s) 271, 613, 1174
SfaNI GCATC 9 cut(s) 730, 868, 1269, 1291, 1464, 1488, 1634, 1744, 1834
SfcI CTRYAG 1 cut(s) 1410
Sfr274I CTCGAG 1 cut(s) 491
SinI GGWCC 6 cut(s) 611, 975, 1172, 1181, 1325, 1373
SlaI CTCGAG 1 cut(s) 491
SmiMI CAYNNNNRTG 4 cut(s) 1638, 1803, 1830, 1905
SmlI CTYRAG 3 cut(s) 491, 749, 1152
SmoI CTYRAG 3 cut(s) 491, 749, 1152
Sse9I AATT 6 cut(s) 35, 423, 562, 996, 1093, 1132
SseBI AGGCCT 2 cut(s) 910, 1198
SspI AATATT 1 cut(s) 514
SspMI CTAG 6 cut(s) 183, 363, 461, 501, 810, 1980
SstI GAGCTC 1 cut(s) 379
StuI AGGCCT 2 cut(s) 910, 1198
StyI CCWWGG 1 cut(s) 1099
TaaI ACNGT 4 cut(s) 905, 1380, 1553, 1802
TaiI ACGT 1 cut(s) 129
TaqI TCGA 5 cut(s) 260, 266, 492, 821, 1604
TaqII GACCGA 1 cut(s) 1342
TasI AATT 6 cut(s) 35, 423, 562, 996, 1093, 1132
TauI GCSGC 1 cut(s) 2119
TfiI GAWTC 6 cut(s) 412, 601, 1356, 1450, 1601, 1738
Tru1I TTAA 7 cut(s) 129, 207, 387, 591, 789, 945, 1650
Tru9I TTAA 7 cut(s) 129, 207, 387, 591, 789, 945, 1650
TscAI CASTG 2 cut(s) 783, 1558
TseFI GTSAC 2 cut(s) 1796, 1907
TseI GCWGC 3 cut(s) 860, 1595, 1622
Tsp45I GTSAC 2 cut(s) 1796, 1907
TspDTI ATGAA 6 cut(s) 29, 173, 1286, 1496, 1713, 1779
TspGWI ACGGA 1 cut(s) 651
TspRI CASTG 2 cut(s) 783, 1558
VpaK11BI GGWCC 6 cut(s) 611, 975, 1172, 1181, 1325, 1373
XagI CCTNNNNNAGG 2 cut(s) 1410, 1413
XapI RAATTY 2 cut(s) 562, 1093
XbaI TCTAGA 1 cut(s) 182
XceI RCATGY 1 cut(s) 1904
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XhoI CTCGAG 1 cut(s) 491
XmnI GAANNNNTTC 2 cut(s) 144, 1902
XspI CTAG 6 cut(s) 183, 363, 461, 501, 810, 1980
Zsp2I ATGCAT 1 cut(s) 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.