RLG00000034897

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006731
Physical Location & Seq
Forward (+)
56723826 .. 56729109
5284 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034897

Sequence Viewer

Length: 2103 bp
ATGGACGACGGCGACGGAGCCGATCAGTTCCACCGTAACGAGGCCATCTCGGCCGTCGCCGACGACGGCTTTTTAGCCGAGGAGGACGACGACTACGAGGACCTCTACAACGATGTGAATGTTGGCGAGGGGTTTTATCAGTCTATGAGAAAGAACGAGGATTTAGGGTTTAAAAATGAGGCCGTGGAGGAGAAGAAGGTTGAGTTGCCGGAGGTTTCGGCTCCGCAACATCAAGGCGCTCCGATACCGAGCTCCGGAGGCGGTGAGGGTAGGGGTTCTGGGTTCGGTAATCAGAATCTAGGGTTTAGAGGGAACGAGATGGGTGCGAAAGGGAGCGGTGGGTTGGGAGGGCCTATTGGTAGCGGAGGTGGGATGAGGATTGAATTAGGGCAAGCGTCGAGTAAATTGAATGAGTTTGAGCACCAAAGTGGGAATAATGTTGGTCTTGGGGTTCAAGGGATTGGTGCTCAGCAGCAGCAGCATCAGCATCAGCAACAATTACAACCGCAACATCAACCGCAATTGCAACTGCAACCTCCACAGCAACATCAACAGTTACACGGTGGTGCTGCTGCTGTTGGGAATGTGGGGAATGAGGGTTTCTTGAGGCAACCTGGTGGTGTCGGAGGGGGGAATGTGAACGGTGTTGGTGGGAACAGTGGTCCAGGAGGAGGATTCAGTGGAGGTGGTGCAGGTGGGGCAACATTGTATGTGGGGGATTTGCACTGGTGGACAACGGATGCAGAGCTGGAGGTGGAGTTGTGCAAGTATGGAGCTGTGAAGGAAGTGAAGTTTTTCGATGAGAAAGCCAGTGGGAAGTCAAAAGGATATTGCCAGGTAGACTTCTATGATTCTGCTGCTGCCATGGCCTGCAAGGATGGGATGCATGGGCATTTGTTTAACGGGCGGCCATGTGTTGTTGCTTTTGCATCACCCTATAGTGTTAAGAGAATGGGGGAGGCTCAAGTGAATAGGAACCAGCAGGTAACCCAAACTGCACAAGCTCAACCAAGGAGGGGGCCTAATGATGCTGCTGGGAATAAAGCTGGTGGGAGTGCCATAACAACAGGTGGGAATTATCAAGGTGGGGATAATAACAACAGAGGTTATGGGAGAGCTAACTGGGGGCGAGGTAATTCTCAGGGTATGGGAGGTAGAGGTCCAGGTGGTCCGATGAGGAATAGGGGTGGAATGAGTGGCAGAGGTATAATGGGGAATGGTGGACACGGGTTTGGGCAAGGTATGGGGGCAACCCCGCCTTTGATGCACCCTCAGTCAATGATGGGTCAGGGCTTTGATCCAGCTTTTGGCGCTCCAATGGGAAGAATGGGGAGTTATGGAGGCTTTCCAGGAGCTCCACAGCCTCCTTTCTCTGGGATGATGTCTTCATTCCCACCGGTGGGGGGTGTTGGGCTGCCTGGAGTAGCCCCTCATGTGAATCCTGCATTTTTTGGGCGAGGGATGCCCATGGGAATGATGCCGACATCAGGTGTTGATGGGCCTAATATGGGAATGTGGCCAGATCCTAATATGGGGGGTGGATGGCCTGGTGAGGAGCATGGTGGTGGCAGAGTTGGGGAGTCTAGTTATGGTGAGGAAGCTGGTTCTGACCATCAATATGGTGAGGGTAGTCATGATAGAGGTGGGTGGCAGAATGCTATGAAGGAGAAAGATAGAGGTTCAGAGAGGGACTGGTCTGGATCTTCTGATAGGAGGTATCGGGAAGATAGGGATCAAGGGTTTGACAGAGACATGCCAAGAGAGAAAGAAGTGGGTCATGACCATGAATGGTCTGAAAGAAGGCATCGGAATGATGTAGATGTTAATCGGGAGCGGGACAGAGAGCGTGAAAGGGGCCGAGAACGTTCTCGAGATCGCGATCGTGACAGGTACAGGGAAGATAGAGAAAGATATGCTGATCATCATAAATACAGAGATCGTGAAACGGTGCACCAGGATGAAATAGATAGGGGGAGGTCTACAAGGACCCATAGTAAGGCACGCTTATCTGAAGATGATGACCGTCGTTCACGATCTAGGGACCGCCGTTCAAGATCTAGGGATGTTGATTATGGGAAGAGGCGGCGGCTTACTTCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

701

Amino Acids

75.55

Weight (kDa)

6.14

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 236 - 305 1.6e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 683
Acc36I ACCTGC 2 cut(s) 683, 973
AccB7I CCANNNNNTGG 1 cut(s) 1307
AccBSI CCGCTC 2 cut(s) 336, 1834
AccI GTMKAC 2 cut(s) 840, 1979
AccII CGCG 1 cut(s) 1878
AccIII TCCGGA 1 cut(s) 254
AclI AACGTT 1 cut(s) 1864
AclWI GGATC 4 cut(s) 1292, 1517, 1708, 1740
AcoI YGGCCR 3 cut(s) 51, 908, 1517
AcuI CTGAAG 1 cut(s) 2031
AfaI GTAC 1 cut(s) 1892
AgeI ACCGGT 1 cut(s) 1396
AgsI TTSAA 4 cut(s) 383, 409, 455, 2052
AjnI CCWGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
AleI CACNNNNGTG 2 cut(s) 426, 564
AluBI AGCT 9 cut(s) 252, 748, 776, 1004, 1046, 1118, 1304, 1355, 1601
AluI AGCT 9 cut(s) 252, 748, 776, 1004, 1046, 1118, 1304, 1355, 1601
Alw21I GWGCWC 5 cut(s) 254, 423, 469, 1357, 1953
Alw26I GTCTC 1 cut(s) 1743
Alw44I GTGCAC 1 cut(s) 1949
AlwI GGATC 4 cut(s) 1292, 1517, 1708, 1740
Ama87I CYCGRG 1 cut(s) 1869
Aor13HI TCCGGA 1 cut(s) 254
ApaLI GTGCAC 1 cut(s) 1949
ApeKI GCWGC 9 cut(s) 472, 475, 478, 569, 572, 857, 860, 1031, 1414
AsiGI ACCGGT 1 cut(s) 1396
Asp700I GAANNNNTTC 1 cut(s) 794
AspLEI GCGC 2 cut(s) 239, 1313
AsuHPI GGTGA 5 cut(s) 275, 924, 1562, 1604, 1634
AvaI CYCGRG 1 cut(s) 1869
AvaII GGWCC 6 cut(s) 100, 662, 1160, 1169, 1986, 2041
BaeGI GKGCMC 1 cut(s) 1953
BalI TGGCCA 1 cut(s) 1519
BanII GRGCYC 2 cut(s) 254, 1357
BbsI GAAGAC 1 cut(s) 1377
Bbv12I GWGCWC 5 cut(s) 254, 423, 469, 1357, 1953
BbvI GCAGC 9 cut(s) 484, 487, 490, 556, 559, 844, 847, 1018, 1401
BccI CCATC 7 cut(s) 53, 313, 872, 1276, 1490, 1536, 1620
BceAI ACGGC 5 cut(s) 25, 38, 82, 167, 2031
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
BclI TGATCA 1 cut(s) 1918
BcoDI GTCTC 1 cut(s) 1743
BfaI CTAG 4 cut(s) 299, 1584, 2037, 2058
BfmI CTRYAG 1 cut(s) 937
BfoI RGCGCY 2 cut(s) 240, 1314
BfuAI ACCTGC 2 cut(s) 683, 973
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 1 cut(s) 2054
BlpI GCTNAGC 1 cut(s) 468
Bme1390I CCNGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
Bme18I GGWCC 6 cut(s) 100, 662, 1160, 1169, 1986, 2041
BmeT110I CYCGRG 1 cut(s) 1869
BmiI GGNNCC 7 cut(s) 19, 222, 977, 1020, 1856, 1988, 2042
BmrFI CCNGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
BmrI ACTGGG 1 cut(s) 1132
BmuI ACTGGG 1 cut(s) 1132
BpiI GAAGAC 1 cut(s) 1377
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpmI CTGGAG 2 cut(s) 770, 1440
Bpu1102I GCTNAGC 1 cut(s) 468
BpuEI CTTGAG 2 cut(s) 625, 948
BsaBI GATNNNNATC 3 cut(s) 1731, 1824, 1878
BsaJI CCNNGG 5 cut(s) 78, 183, 864, 1010, 1467
BsaWI WCCGGW 2 cut(s) 254, 1396
BsaXI ACNNNNNCTCC 2 cut(s) 743, 773
Bse118I RCCGGY 1 cut(s) 1396
Bse1I ACTGG 4 cut(s) 731, 810, 1127, 1697
Bse8I GATNNNNATC 3 cut(s) 1731, 1824, 1878
BseAI TCCGGA 1 cut(s) 254
BseBI CCWGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
BseDI CCNNGG 5 cut(s) 78, 183, 864, 1010, 1467
BseGI GGATG 9 cut(s) 378, 745, 883, 888, 1383, 1467, 1547, 1963, 2068
BseJI GATNNNNATC 3 cut(s) 1731, 1824, 1878
BseMII CTCAG 4 cut(s) 482, 1154, 1286, 2088
BseNI ACTGG 4 cut(s) 731, 810, 1127, 1697
BseRI GAGGAG 4 cut(s) 95, 203, 684, 1568
BseSI GKGCMC 1 cut(s) 1953
BseX3I CGGCCG 1 cut(s) 51
BseXI GCAGC 9 cut(s) 484, 487, 490, 556, 559, 844, 847, 1018, 1401
BseYI CCCAGC 1 cut(s) 1034
BsgI GTGCAG 2 cut(s) 711, 981
Bsh1236I CGCG 1 cut(s) 1878
Bsh1285I CGRYCG 2 cut(s) 54, 1882
BshTI ACCGGT 1 cut(s) 1396
BsiEI CGRYCG 2 cut(s) 54, 1882
BsiHKAI GWGCWC 5 cut(s) 254, 423, 469, 1357, 1953
BsiHKCI CYCGRG 1 cut(s) 1869
BsiSI CCGG 3 cut(s) 209, 255, 1397
BslFI GGGAC 3 cut(s) 1703, 1850, 2054
BsmAI GTCTC 1 cut(s) 1743
BsmFI GGGAC 3 cut(s) 1703, 1850, 2054
BsmI GAATGC 1 cut(s) 1660
BsoBI CYCGRG 1 cut(s) 1869
Bsp1286I GDGCHC 5 cut(s) 254, 423, 469, 1357, 1953
Bsp13I TCCGGA 1 cut(s) 254
Bsp1720I GCTNAGC 1 cut(s) 468
Bsp19I CCATGG 2 cut(s) 864, 1467
Bsp68I TCGCGA 1 cut(s) 1878
BspCNI CTCAG 4 cut(s) 481, 1153, 1285, 2089
BspEI TCCGGA 1 cut(s) 254
BspFNI CGCG 1 cut(s) 1878
BspHI TCATGA 2 cut(s) 1633, 1777
BspLI GGNNCC 7 cut(s) 19, 222, 977, 1020, 1856, 1988, 2042
BspMI ACCTGC 2 cut(s) 683, 973
BspPI GGATC 4 cut(s) 1292, 1517, 1708, 1740
BsrBI CCGCTC 2 cut(s) 336, 1834
BsrFI RCCGGY 1 cut(s) 1396
BsrI ACTGG 4 cut(s) 731, 810, 1127, 1697
BssAI RCCGGY 1 cut(s) 1396
BssECI CCNNGG 5 cut(s) 78, 183, 864, 1010, 1467
BssT1I CCWWGG 3 cut(s) 864, 1010, 1467
Bst2UI CCWGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
Bst4CI ACNGT 7 cut(s) 35, 555, 563, 644, 659, 1948, 2024
Bst6I CTCTTC 1 cut(s) 2072
BstC8I GCNNGC 3 cut(s) 393, 871, 2002
BstDEI CTNAG 4 cut(s) 468, 1140, 1272, 2097
BstDSI CCRYGG 3 cut(s) 183, 864, 1467
BstEII GGTNACC 1 cut(s) 985
BstF5I GGATG 9 cut(s) 378, 745, 883, 888, 1383, 1467, 1547, 1963, 2068
BstFNI CGCG 1 cut(s) 1878
BstH2I RGCGCY 2 cut(s) 240, 1314
BstHHI GCGC 2 cut(s) 239, 1313
BstMAI GTCTC 1 cut(s) 1743
BstMCI CGRYCG 2 cut(s) 54, 1882
BstMWI GCNNNNNNNGC 9 cut(s) 50, 258, 478, 484, 698, 866, 1264, 1310, 1462
BstNI CCWGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
BstNSI RCATGY 1 cut(s) 1756
BstPI GGTNACC 1 cut(s) 985
BstSCI CCNGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
BstSFI CTRYAG 1 cut(s) 937
BstSLI GKGCMC 1 cut(s) 1953
BstUI CGCG 1 cut(s) 1878
BstV1I GCAGC 9 cut(s) 484, 487, 490, 556, 559, 844, 847, 1018, 1401
BstV2I GAAGAC 1 cut(s) 1377
BstX2I RGATCY 3 cut(s) 1522, 1700, 2054
BstXI CCANNNNNNTGG 1 cut(s) 1619
BstYI RGATCY 3 cut(s) 1522, 1700, 2054
BstZI CGGCCG 1 cut(s) 51
BtgI CCRYGG 3 cut(s) 183, 864, 1467
BtsCI GGATG 9 cut(s) 378, 745, 883, 888, 1383, 1467, 1547, 1963, 2068
BtsIMutI CAGTG 4 cut(s) 664, 685, 724, 817
BtuMI TCGCGA 1 cut(s) 1878
BveI ACCTGC 2 cut(s) 683, 973
Cac8I GCNNGC 3 cut(s) 393, 871, 2002
CciI TCATGA 2 cut(s) 1633, 1777
CfoI GCGC 2 cut(s) 239, 1313
Cfr10I RCCGGY 1 cut(s) 1396
CseI GACGC 1 cut(s) 384
CsiI ACCWGGT 1 cut(s) 613
Csp6I GTAC 1 cut(s) 1891
CspAI ACCGGT 1 cut(s) 1396
CviQI GTAC 1 cut(s) 1891
DdeI CTNAG 4 cut(s) 468, 1140, 1272, 2097
DraI TTTAAA 1 cut(s) 172
EaeI YGGCCR 3 cut(s) 51, 908, 1517
EagI CGGCCG 1 cut(s) 51
Eam1104I CTCTTC 1 cut(s) 2072
EarI CTCTTC 1 cut(s) 2072
Ecl136II GAGCTC 2 cut(s) 252, 1355
EclXI CGGCCG 1 cut(s) 51
Eco130I CCWWGG 3 cut(s) 864, 1010, 1467
Eco24I GRGCYC 2 cut(s) 254, 1357
Eco47I GGWCC 6 cut(s) 100, 662, 1160, 1169, 1986, 2041
Eco52I CGGCCG 1 cut(s) 51
Eco53kI GAGCTC 2 cut(s) 252, 1355
Eco57I CTGAAG 1 cut(s) 2031
Eco88I CYCGRG 1 cut(s) 1869
Eco91I GGTNACC 1 cut(s) 985
EcoICRI GAGCTC 2 cut(s) 252, 1355
EcoO109I RGGNCCY 4 cut(s) 100, 350, 1019, 1986
EcoO65I GGTNACC 1 cut(s) 985
EcoRII CCWGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
EcoT14I CCWWGG 3 cut(s) 864, 1010, 1467
EcoT22I ATGCAT 1 cut(s) 888
EcoT38I GRGCYC 2 cut(s) 254, 1357
ErhI CCWWGG 3 cut(s) 864, 1010, 1467
FalI AAGNNNNNCTT 2 cut(s) 1988, 2020
FaqI GGGAC 3 cut(s) 1703, 1850, 2054
FauI CCCGC 2 cut(s) 1263, 1827
FbaI TGATCA 1 cut(s) 1918
FblI GTMKAC 2 cut(s) 840, 1979
FokI GGATG 9 cut(s) 385, 752, 890, 895, 1390, 1474, 1554, 1970, 2075
FriOI GRGCYC 2 cut(s) 254, 1357
FspBI CTAG 4 cut(s) 299, 1584, 2037, 2058
GlaI GCGC 2 cut(s) 238, 1312
GsaI CCCAGC 1 cut(s) 1038
GsuI CTGGAG 2 cut(s) 770, 1440
HaeII RGCGCY 2 cut(s) 240, 1314
HapII CCGG 3 cut(s) 209, 255, 1397
HgaI GACGC 1 cut(s) 384
HhaI GCGC 2 cut(s) 239, 1313
Hin6I GCGC 2 cut(s) 237, 1311
HinP1I GCGC 2 cut(s) 237, 1311
HinfI GANTC 5 cut(s) 295, 675, 851, 1438, 1580
HpaII CCGG 3 cut(s) 209, 255, 1397
HphI GGTGA 5 cut(s) 275, 924, 1562, 1604, 1634
Hpy166II GTNNAC 7 cut(s) 640, 732, 841, 1223, 1951, 1980, 2030
Hpy8I GTNNAC 7 cut(s) 640, 732, 841, 1223, 1951, 1980, 2030
Hpy99I CGWCG 8 cut(s) 11, 17, 59, 65, 68, 92, 400, 2028
HpyAV CCTTC 4 cut(s) 190, 775, 1657, 1794
HpyCH4III ACNGT 7 cut(s) 35, 555, 563, 644, 659, 1948, 2024
HpyCH4IV ACGT 1 cut(s) 1864
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 258, 478, 484, 698, 866, 1264, 1310, 1462
HpyF3I CTNAG 4 cut(s) 468, 1140, 1272, 2097
HpySE526I ACGT 1 cut(s) 1864
HspAI GCGC 2 cut(s) 237, 1311
Kpn2I TCCGGA 1 cut(s) 254
Ksp22I TGATCA 1 cut(s) 1918
Lsp1109I GCAGC 9 cut(s) 484, 487, 490, 556, 559, 844, 847, 1018, 1401
MabI ACCWGGT 1 cut(s) 613
MaeI CTAG 4 cut(s) 299, 1584, 2037, 2058
MaeII ACGT 1 cut(s) 1864
MaeIII GTNAC 4 cut(s) 35, 555, 985, 1883
MbiI CCGCTC 2 cut(s) 336, 1834
MboII GAAGA 8 cut(s) 205, 1335, 1377, 1695, 1736, 1910, 2024, 2089
MfeI CAATTG 1 cut(s) 521
MflI RGATCY 3 cut(s) 1522, 1700, 2054
MhlI GDGCHC 5 cut(s) 254, 423, 469, 1357, 1953
MlsI TGGCCA 1 cut(s) 1519
MluCI AATT 6 cut(s) 383, 404, 497, 521, 1075, 1135
MluNI TGGCCA 1 cut(s) 1519
MlyI GAGTC 1 cut(s) 1589
MmeI TCCRAC 1 cut(s) 604
Mox20I TGGCCA 1 cut(s) 1519
Mph1103I ATGCAT 1 cut(s) 888
MroI TCCGGA 1 cut(s) 254
MroXI GAANNNNTTC 1 cut(s) 794
MscI TGGCCA 1 cut(s) 1519
MseI TTAA 4 cut(s) 171, 900, 945, 1824
MslI CAYNNNNRTG 8 cut(s) 426, 564, 1472, 1563, 1617, 1782, 1809, 1956
Msp20I TGGCCA 1 cut(s) 1519
MspI CCGG 3 cut(s) 209, 255, 1397
MspR9I CCNGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
MunI CAATTG 1 cut(s) 521
Mva1269I GAATGC 1 cut(s) 1660
MvaI CCWGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
MvnI CGCG 1 cut(s) 1878
MwoI GCNNNNNNNGC 9 cut(s) 50, 258, 478, 484, 698, 866, 1264, 1310, 1462
NcoI CCATGG 2 cut(s) 864, 1467
NlaIV GGNNCC 7 cut(s) 19, 222, 977, 1020, 1856, 1988, 2042
NmeAIII GCCGAG 3 cut(s) 29, 103, 1883
NmuCI GTSAC 1 cut(s) 1883
NruI TCGCGA 1 cut(s) 1878
NsiI ATGCAT 1 cut(s) 888
NspI RCATGY 1 cut(s) 1756
OliI CACNNNNGTG 2 cut(s) 426, 564
PaeR7I CTCGAG 1 cut(s) 1869
PagI TCATGA 2 cut(s) 1633, 1777
PaqCI CACCTGC 1 cut(s) 683
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 1 cut(s) 1660
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 4 cut(s) 295, 675, 851, 1438
PflMI CCANNNNNTGG 1 cut(s) 1307
PfoI TCCNGGA 2 cut(s) 664, 1348
PinAI ACCGGT 1 cut(s) 1396
Ple19I CGATCG 1 cut(s) 1882
PleI GAGTC 1 cut(s) 1588
PpsI GAGTC 1 cut(s) 1588
PpuMI RGGWCCY 2 cut(s) 100, 1986
Psp124BI GAGCTC 2 cut(s) 254, 1357
Psp1406I AACGTT 1 cut(s) 1864
Psp5II RGGWCCY 2 cut(s) 100, 1986
Psp6I CCWGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
PspEI GGTNACC 1 cut(s) 985
PspFI CCCAGC 1 cut(s) 1034
PspGI CCWGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
PspN4I GGNNCC 7 cut(s) 19, 222, 977, 1020, 1856, 1988, 2042
PspPPI RGGWCCY 2 cut(s) 100, 1986
PsuI RGATCY 3 cut(s) 1522, 1700, 2054
PvuI CGATCG 1 cut(s) 1882
RruI TCGCGA 1 cut(s) 1878
RsaI GTAC 1 cut(s) 1892
RsaNI GTAC 1 cut(s) 1891
RseI CAYNNNNRTG 8 cut(s) 426, 564, 1472, 1563, 1617, 1782, 1809, 1956
SacI GAGCTC 2 cut(s) 254, 1357
SaqAI TTAA 4 cut(s) 171, 900, 945, 1824
SchI GAGTC 1 cut(s) 1589
ScrFI CCNGG 8 cut(s) 615, 666, 836, 1164, 1350, 1419, 1548, 1955
SduI GDGCHC 5 cut(s) 254, 423, 469, 1357, 1953
SexAI ACCWGGT 1 cut(s) 613
SfcI CTRYAG 1 cut(s) 937
SfiI GGCCNNNNNGGCC 1 cut(s) 50
Sfr274I CTCGAG 1 cut(s) 1869
SgrAI CRCCGGYG 1 cut(s) 1396
SinI GGWCC 6 cut(s) 100, 662, 1160, 1169, 1986, 2041
SlaI CTCGAG 1 cut(s) 1869
SmiMI CAYNNNNRTG 8 cut(s) 426, 564, 1472, 1563, 1617, 1782, 1809, 1956
SmlI CTYRAG 3 cut(s) 604, 963, 1869
SmoI CTYRAG 3 cut(s) 604, 963, 1869
Sse9I AATT 6 cut(s) 383, 404, 497, 521, 1075, 1135
SspMI CTAG 4 cut(s) 299, 1584, 2037, 2058
SstI GAGCTC 2 cut(s) 254, 1357
StyD4I CCNGG 8 cut(s) 613, 664, 834, 1162, 1348, 1417, 1546, 1953
StyI CCWWGG 3 cut(s) 864, 1010, 1467
TaaI ACNGT 7 cut(s) 35, 555, 563, 644, 659, 1948, 2024
TaiI ACGT 1 cut(s) 1867
TaqI TCGA 3 cut(s) 398, 798, 1870
TasI AATT 6 cut(s) 383, 404, 497, 521, 1075, 1135
TauI GCSGC 3 cut(s) 910, 2086, 2089
TfiI GAWTC 4 cut(s) 295, 675, 851, 1438
Tru1I TTAA 4 cut(s) 171, 900, 945, 1824
Tru9I TTAA 4 cut(s) 171, 900, 945, 1824
TscAI CASTG 4 cut(s) 664, 685, 731, 817
TseFI GTSAC 1 cut(s) 1883
TseI GCWGC 9 cut(s) 472, 475, 478, 569, 572, 857, 860, 1031, 1414
Tsp45I GTSAC 1 cut(s) 1883
TspDTI ATGAA 4 cut(s) 1377, 1676, 1800, 1974
TspGWI ACGGA 2 cut(s) 30, 752
TspRI CASTG 4 cut(s) 664, 685, 731, 817
Van91I CCANNNNNTGG 1 cut(s) 1307
VneI GTGCAC 1 cut(s) 1949
VpaK11BI GGWCC 6 cut(s) 100, 662, 1160, 1169, 1986, 2041
XceI RCATGY 1 cut(s) 1756
XhoI CTCGAG 1 cut(s) 1869
XmiI GTMKAC 2 cut(s) 840, 1979
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 4 cut(s) 299, 1584, 2037, 2058
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.