Rw5G033310

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0006731
Physical Location & Seq
Forward (+)
56503178 .. 56507065
3888 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G033310.1

Sequence Viewer

Length: 2079 bp
ATGGACGACGGCGACGGAGCCGATCATTTCCACCGTAACGAGGCCATCTCGGCCGTCGCCGACGACGGCTTTTTAGCCGAGGAGGACGACGACTACGAGGACCTCTACAACGATGTGAATGTCGGCGAGGGGTTTTATCAGTCTATGAGAAAGAGCGAGGATTTAGGGTTTAAAAATGAGGCCGTGGAGGAGAAGAAGGTTGAGTTGCCGGAGGTTTCGGCTCCGCAACATCAAGGCGCTCCGATACCGAGTTCCGGAGGCGGTGAGGGTAGGGGTTCTGGGTTCGGTAATCAGAATCTAGGGTTTAGAGGGAACGAGATGGGTGCGAAAGGGAGTGGTGGTTTGGGAGGGCCTATTGGTAGCGGAGGTGGGATGAGGATTGAATTAGGGCAAGCGTCGAGTAAATTGAATGAGTTTGAGCACCAAAGTGGGAATAATGTTGGTCTTGGGGTTCAAGGGATTGGTGCTCAGCAGCAGCATCAGCATCAGCAGCAATTACAACCGCAACATCAACTGCAACCACAATCGCAACTGCAACCTCCACAGCAACATCAACAGTTACACGGTGGTCCTGTTGCTGTTGGGAATGTGGGGAATGAGGGTTTCTTGAGGCAACCTGGTGGTGTCGGAGGGGGGAATATGAACGGTGTTGGTGGGAACAGTGGTCCAGGAGGAGGATTCAGTGGAGGTGGTGCAGGTGGGGCAACATTGTATGTGGGGGATTTGCACTGGTGGACAACGGATGCAGAGCTGGAGGCCGAGTTGTGCAAGTATGGAGCTGTGAAGGAAGTGAAGTTTTTCGATGAGAAAGCCAGTGGGAAGATGGGATGCAATGGGCATTTGTTTAATGGGCGGCCGTGTGTTGTTGCTTTTGCATCACCCTATAGTGTTAAGAGAATGGGGGAGGCTCAAGTGAATAGGAACCAGCAGGTAACCCAAACTGCACAAGCTCAACCAAGGAGGGGGCCTAATGATGCTGCTGGGAATAAAGTTGGTGGGAGTGCCATAACAACAGGTGGGAATTATCAAGGTGGGGATAATAACAGCAGAGGTTATGGGAGAGCTAACTGGGGCCGAGGTAATTCTCAGGGTATGGGAGGTAGAGGTCCAGGTGGTCCGATGAGGAATAGGGGTGGAATGAGTGGCAGAGGTATAATGGGGAATGGTGGAAACGGGTTTGGGCAAGGTATGGGGGCAACCCCTCCTTTGATGCACCCTCAGTCAATGATGGGTCAGGGCTTTGATCCAGCTTTTGGTGCTCCAATGGGAAGAATGGGGAGTTATGGAGGCTTTCCAGGAGCTCCACAGCCTCCTTTCTCTGGGATGATGTCTTCATTCCCACCAGTTGGGGGTGTTGGGCTGCCTGGAGTAGCTCCTCATGTGAATCCTGCATTTTTTGGACGAGGGATGCCCATGGGAATGATGCCAACATCAGGTGTTGACGGGCCTAATATGGGAATGTGGCCAGATCCTAATATGGGGGGTGGATGGCCTGGTGAGGATCATGGTGGTGGCAGAGCTGGGGAGTCTAGTTATGGTGAGGAAGCTGGTTCTGACCATCAATATGGTGAGGGTAGTCATGATAGAGGTGGGTGGCAGAATGCTATGAAGGAGAAAGATAGAGGTTCAGAAAGGGACTGGTCTGGATCTTCTGATAGGAGGTATCGGGAAGATAGGGATCAAGGGTTTGACAGAGACATGCCAAGAGAGAAAGAAGTGGGTCATGACCGTGAATGGTCTGAAAGAAGGCATCGGAATGATGTAGATGTTAATCGAGAGCGGGACAGAGAGCGTGATAGGGGCCGAGAACGTTCTCGAGATCGCGATCGTGACAGGTACAGGGAAGATAGAGAAAGATATGCTGATCATCATAAATACAGAGATCATGAAACGGTGCACCAGGATGAAATAGAAAGGGGGAGGTCTACAAGGACCCATAGTAAGGCACGCTTATCTGAAGATGATGACCGTCGTTCAAGATCTAGGGACCGCCGTTCAAGATCTAGGGATGTTGATTATGGGAAGAGGCGGCGGCTTACTTCTGACACTTGTCCAGACACTGTTCCACTTGTTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

692

Amino Acids

74.58

Weight (kDa)

6.11

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 686
Acc36I ACCTGC 2 cut(s) 686, 919
AccB7I CCANNNNNTGG 2 cut(s) 1253, 1346
AccBSI CCGCTC 1 cut(s) 1780
AccI GTMKAC 1 cut(s) 1925
AccII CGCG 1 cut(s) 1824
AccIII TCCGGA 1 cut(s) 254
AciI CCGC 9 cut(s) 224, 261, 363, 503, 853, 1780, 1990, 2029, 2032
AclI AACGTT 1 cut(s) 1810
AclWI GGATC 5 cut(s) 1238, 1463, 1509, 1654, 1686
AcoI YGGCCR 3 cut(s) 51, 854, 1463
AcuI CTGAAG 1 cut(s) 1977
AfaI GTAC 1 cut(s) 1838
AgsI TTSAA 6 cut(s) 383, 409, 455, 1977, 1998, 2075
AjnI CCWGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
AleI CACNNNNGTG 1 cut(s) 426
AluBI AGCT 9 cut(s) 751, 779, 950, 1064, 1250, 1301, 1373, 1520, 1547
AluI AGCT 9 cut(s) 751, 779, 950, 1064, 1250, 1301, 1373, 1520, 1547
Alw21I GWGCWC 5 cut(s) 423, 469, 1261, 1303, 1899
Alw26I GTCTC 1 cut(s) 1689
Alw44I GTGCAC 1 cut(s) 1895
AlwI GGATC 5 cut(s) 1238, 1463, 1509, 1654, 1686
AlwNI CAGNNNCTG 1 cut(s) 2060
Ama87I CYCGRG 1 cut(s) 1815
Aor13HI TCCGGA 1 cut(s) 254
ApaLI GTGCAC 1 cut(s) 1895
ApeKI GCWGC 5 cut(s) 472, 475, 490, 977, 1360
Asp700I GAANNNNTTC 1 cut(s) 797
AspLEI GCGC 1 cut(s) 239
AsuHPI GGTGA 5 cut(s) 275, 870, 1508, 1550, 1580
AvaI CYCGRG 1 cut(s) 1815
AvaII GGWCC 7 cut(s) 100, 569, 665, 1106, 1115, 1932, 1987
BaeGI GKGCMC 1 cut(s) 1899
BalI TGGCCA 1 cut(s) 1465
BanII GRGCYC 1 cut(s) 1303
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 5 cut(s) 423, 469, 1261, 1303, 1899
BbvI GCAGC 5 cut(s) 484, 487, 502, 964, 1347
BccI CCATC 6 cut(s) 53, 313, 817, 1222, 1482, 1566
BceAI ACGGC 6 cut(s) 25, 38, 82, 167, 841, 1977
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
BclI TGATCA 1 cut(s) 1864
BcoDI GTCTC 1 cut(s) 1689
BfaI CTAG 4 cut(s) 299, 1530, 1983, 2004
BfmI CTRYAG 1 cut(s) 883
BfoI RGCGCY 1 cut(s) 240
BfuAI ACCTGC 2 cut(s) 686, 919
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 2 cut(s) 1979, 2000
BisI GCNGC 8 cut(s) 473, 476, 491, 854, 978, 1361, 2030, 2033
BlpI GCTNAGC 1 cut(s) 468
BlsI GCNGC 8 cut(s) 474, 477, 492, 855, 979, 1362, 2031, 2034
Bme1390I CCNGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
Bme18I GGWCC 7 cut(s) 100, 569, 665, 1106, 1115, 1932, 1987
BmeT110I CYCGRG 1 cut(s) 1815
BmiI GGNNCC 8 cut(s) 19, 222, 923, 966, 1073, 1802, 1934, 1988
BmrFI CCNGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
BmrI ACTGGG 1 cut(s) 1078
BmuI ACTGGG 1 cut(s) 1078
BoxI GACNNNNGTC 1 cut(s) 2049
BpiI GAAGAC 1 cut(s) 1323
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpmI CTGGAG 2 cut(s) 773, 1386
Bpu1102I GCTNAGC 1 cut(s) 468
BpuEI CTTGAG 2 cut(s) 628, 894
BsaBI GATNNNNATC 3 cut(s) 1677, 1770, 1824
BsaJI CCNNGG 5 cut(s) 78, 183, 956, 1075, 1413
BsaWI WCCGGW 1 cut(s) 254
BsaXI ACNNNNNCTCC 4 cut(s) 325, 355, 746, 776
Bse1I ACTGG 5 cut(s) 734, 813, 1073, 1343, 1643
Bse3DI GCAATG 1 cut(s) 838
Bse8I GATNNNNATC 3 cut(s) 1677, 1770, 1824
BseAI TCCGGA 1 cut(s) 254
BseBI CCWGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
BseDI CCNNGG 5 cut(s) 78, 183, 956, 1075, 1413
BseGI GGATG 8 cut(s) 378, 748, 833, 1329, 1413, 1493, 1909, 2014
BseJI GATNNNNATC 3 cut(s) 1677, 1770, 1824
BseMI GCAATG 1 cut(s) 838
BseMII CTCAG 3 cut(s) 482, 1100, 1232
BseNI ACTGG 5 cut(s) 734, 813, 1073, 1343, 1643
BseRI GAGGAG 4 cut(s) 95, 203, 687, 1365
BseSI GKGCMC 1 cut(s) 1899
BseX3I CGGCCG 2 cut(s) 51, 854
BseXI GCAGC 5 cut(s) 484, 487, 502, 964, 1347
BseYI CCCAGC 2 cut(s) 980, 1520
BsgI GTGCAG 2 cut(s) 714, 927
Bsh1236I CGCG 1 cut(s) 1824
Bsh1285I CGRYCG 3 cut(s) 54, 857, 1828
BsiEI CGRYCG 3 cut(s) 54, 857, 1828
BsiHKAI GWGCWC 5 cut(s) 423, 469, 1261, 1303, 1899
BsiHKCI CYCGRG 1 cut(s) 1815
BsiSI CCGG 2 cut(s) 209, 255
BslFI GGGAC 3 cut(s) 1649, 1796, 2000
BsmAI GTCTC 1 cut(s) 1689
BsmFI GGGAC 3 cut(s) 1649, 1796, 2000
BsmI GAATGC 1 cut(s) 1606
BsoBI CYCGRG 1 cut(s) 1815
Bsp1286I GDGCHC 5 cut(s) 423, 469, 1261, 1303, 1899
Bsp13I TCCGGA 1 cut(s) 254
Bsp1720I GCTNAGC 1 cut(s) 468
Bsp19I CCATGG 1 cut(s) 1413
Bsp68I TCGCGA 1 cut(s) 1824
BspACI CCGC 9 cut(s) 224, 261, 363, 503, 853, 1780, 1990, 2029, 2032
BspCNI CTCAG 3 cut(s) 481, 1099, 1231
BspEI TCCGGA 1 cut(s) 254
BspFNI CGCG 1 cut(s) 1824
BspHI TCATGA 3 cut(s) 1579, 1723, 1885
BspLI GGNNCC 8 cut(s) 19, 222, 923, 966, 1073, 1802, 1934, 1988
BspMI ACCTGC 2 cut(s) 686, 919
BspPI GGATC 5 cut(s) 1238, 1463, 1509, 1654, 1686
BsrBI CCGCTC 1 cut(s) 1780
BsrDI GCAATG 1 cut(s) 838
BsrI ACTGG 5 cut(s) 734, 813, 1073, 1343, 1643
BssECI CCNNGG 5 cut(s) 78, 183, 956, 1075, 1413
BssT1I CCWWGG 2 cut(s) 956, 1413
Bst2UI CCWGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
Bst4CI ACNGT 9 cut(s) 35, 558, 566, 647, 662, 1730, 1894, 1970, 2062
Bst6I CTCTTC 1 cut(s) 2018
BstC8I GCNNGC 2 cut(s) 393, 1948
BstDEI CTNAG 3 cut(s) 468, 1086, 1218
BstDSI CCRYGG 2 cut(s) 183, 1413
BstEII GGTNACC 1 cut(s) 931
BstF5I GGATG 8 cut(s) 378, 748, 833, 1329, 1413, 1493, 1909, 2014
BstFNI CGCG 1 cut(s) 1824
BstH2I RGCGCY 1 cut(s) 240
BstHHI GCGC 1 cut(s) 239
BstMAI GTCTC 1 cut(s) 1689
BstMCI CGRYCG 3 cut(s) 54, 857, 1828
BstMWI GCNNNNNNNGC 5 cut(s) 50, 481, 490, 701, 1256
BstNI CCWGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
BstNSI RCATGY 1 cut(s) 1702
BstPAI GACNNNNGTC 1 cut(s) 2049
BstPI GGTNACC 1 cut(s) 931
BstSCI CCNGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
BstSFI CTRYAG 1 cut(s) 883
BstSLI GKGCMC 1 cut(s) 1899
BstUI CGCG 1 cut(s) 1824
BstV1I GCAGC 5 cut(s) 484, 487, 502, 964, 1347
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 4 cut(s) 1468, 1646, 1979, 2000
BstXI CCANNNNNNTGG 1 cut(s) 1565
BstYI RGATCY 4 cut(s) 1468, 1646, 1979, 2000
BstZI CGGCCG 2 cut(s) 51, 854
BtgI CCRYGG 2 cut(s) 183, 1413
BtsCI GGATG 8 cut(s) 378, 748, 833, 1329, 1413, 1493, 1909, 2014
BtsIMutI CAGTG 5 cut(s) 667, 688, 727, 820, 2058
BtuMI TCGCGA 1 cut(s) 1824
BveI ACCTGC 2 cut(s) 686, 919
Cac8I GCNNGC 2 cut(s) 393, 1948
CaiI CAGNNNCTG 1 cut(s) 2060
CciI TCATGA 3 cut(s) 1579, 1723, 1885
CfoI GCGC 1 cut(s) 239
CseI GACGC 1 cut(s) 384
CsiI ACCWGGT 1 cut(s) 616
Csp6I GTAC 1 cut(s) 1837
CviAII CATG 7 cut(s) 1379, 1414, 1505, 1580, 1699, 1724, 1886
CviQI GTAC 1 cut(s) 1837
DdeI CTNAG 3 cut(s) 468, 1086, 1218
DraI TTTAAA 1 cut(s) 172
EaeI YGGCCR 3 cut(s) 51, 854, 1463
EagI CGGCCG 2 cut(s) 51, 854
Eam1104I CTCTTC 1 cut(s) 2018
EarI CTCTTC 1 cut(s) 2018
Ecl136II GAGCTC 1 cut(s) 1301
EclXI CGGCCG 2 cut(s) 51, 854
Eco130I CCWWGG 2 cut(s) 956, 1413
Eco24I GRGCYC 1 cut(s) 1303
Eco47I GGWCC 7 cut(s) 100, 569, 665, 1106, 1115, 1932, 1987
Eco52I CGGCCG 2 cut(s) 51, 854
Eco53kI GAGCTC 1 cut(s) 1301
Eco57I CTGAAG 1 cut(s) 1977
Eco88I CYCGRG 1 cut(s) 1815
Eco91I GGTNACC 1 cut(s) 931
EcoICRI GAGCTC 1 cut(s) 1301
EcoO109I RGGNCCY 4 cut(s) 100, 350, 965, 1932
EcoO65I GGTNACC 1 cut(s) 931
EcoRII CCWGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
EcoT14I CCWWGG 2 cut(s) 956, 1413
EcoT38I GRGCYC 1 cut(s) 1303
ErhI CCWWGG 2 cut(s) 956, 1413
FaeI CATG 7 cut(s) 1382, 1417, 1508, 1583, 1702, 1727, 1889
FalI AAGNNNNNCTT 2 cut(s) 1934, 1966
FaqI GGGAC 3 cut(s) 1649, 1796, 2000
FatI CATG 7 cut(s) 1378, 1413, 1504, 1579, 1698, 1723, 1885
FauI CCCGC 1 cut(s) 1773
FbaI TGATCA 1 cut(s) 1864
FblI GTMKAC 1 cut(s) 1925
Fnu4HI GCNGC 8 cut(s) 473, 476, 491, 854, 978, 1361, 2030, 2033
FokI GGATG 8 cut(s) 385, 755, 840, 1336, 1420, 1500, 1916, 2021
FriOI GRGCYC 1 cut(s) 1303
Fsp4HI GCNGC 8 cut(s) 473, 476, 491, 854, 978, 1361, 2030, 2033
FspBI CTAG 4 cut(s) 299, 1530, 1983, 2004
GlaI GCGC 1 cut(s) 238
GluI GCNGC 8 cut(s) 473, 476, 491, 854, 978, 1361, 2030, 2033
GsaI CCCAGC 2 cut(s) 984, 1524
GsuI CTGGAG 2 cut(s) 773, 1386
HaeII RGCGCY 1 cut(s) 240
HapII CCGG 2 cut(s) 209, 255
HgaI GACGC 1 cut(s) 384
HhaI GCGC 1 cut(s) 239
Hin1II CATG 7 cut(s) 1382, 1417, 1508, 1583, 1702, 1727, 1889
Hin6I GCGC 1 cut(s) 237
HinP1I GCGC 1 cut(s) 237
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HinfI GANTC 4 cut(s) 295, 678, 1384, 1526
HpaII CCGG 2 cut(s) 209, 255
HphI GGTGA 5 cut(s) 275, 870, 1508, 1550, 1580
Hpy166II GTNNAC 4 cut(s) 735, 1441, 1897, 1926
Hpy8I GTNNAC 4 cut(s) 735, 1441, 1897, 1926
Hpy99I CGWCG 8 cut(s) 11, 17, 59, 65, 68, 92, 400, 1974
HpyAV CCTTC 4 cut(s) 190, 778, 1603, 1740
HpyCH4III ACNGT 9 cut(s) 35, 558, 566, 647, 662, 1730, 1894, 1970, 2062
HpyCH4IV ACGT 1 cut(s) 1810
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 481, 490, 701, 1256
HpyF3I CTNAG 3 cut(s) 468, 1086, 1218
HpySE526I ACGT 1 cut(s) 1810
Hsp92II CATG 7 cut(s) 1382, 1417, 1508, 1583, 1702, 1727, 1889
HspAI GCGC 1 cut(s) 237
Kpn2I TCCGGA 1 cut(s) 254
Ksp22I TGATCA 1 cut(s) 1864
LmnI GCTCC 8 cut(s) 17, 226, 244, 776, 1264, 1298, 1306, 1378
Lsp1109I GCAGC 5 cut(s) 484, 487, 502, 964, 1347
MabI ACCWGGT 1 cut(s) 616
MaeI CTAG 4 cut(s) 299, 1530, 1983, 2004
MaeII ACGT 1 cut(s) 1810
MaeIII GTNAC 4 cut(s) 35, 558, 931, 1829
MbiI CCGCTC 1 cut(s) 1780
MboII GAAGA 9 cut(s) 205, 832, 1281, 1323, 1641, 1682, 1856, 1970, 2035
MflI RGATCY 4 cut(s) 1468, 1646, 1979, 2000
MhlI GDGCHC 5 cut(s) 423, 469, 1261, 1303, 1899
MlsI TGGCCA 1 cut(s) 1465
MluCI AATT 5 cut(s) 383, 404, 494, 1021, 1081
MluNI TGGCCA 1 cut(s) 1465
MlyI GAGTC 1 cut(s) 1535
MmeI TCCRAC 1 cut(s) 607
Mox20I TGGCCA 1 cut(s) 1465
MroI TCCGGA 1 cut(s) 254
MroXI GAANNNNTTC 1 cut(s) 797
MscI TGGCCA 1 cut(s) 1465
MseI TTAA 4 cut(s) 171, 846, 891, 1770
MslI CAYNNNNRTG 7 cut(s) 426, 1418, 1509, 1563, 1728, 1755, 1902
Msp20I TGGCCA 1 cut(s) 1465
MspI CCGG 2 cut(s) 209, 255
MspR9I CCNGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
Mva1269I GAATGC 1 cut(s) 1606
MvaI CCWGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
MvnI CGCG 1 cut(s) 1824
MwoI GCNNNNNNNGC 5 cut(s) 50, 481, 490, 701, 1256
NcoI CCATGG 1 cut(s) 1413
NlaIII CATG 7 cut(s) 1382, 1417, 1508, 1583, 1702, 1727, 1889
NlaIV GGNNCC 8 cut(s) 19, 222, 923, 966, 1073, 1802, 1934, 1988
NmeAIII GCCGAG 5 cut(s) 29, 103, 784, 1100, 1829
NmuCI GTSAC 1 cut(s) 1829
NruI TCGCGA 1 cut(s) 1824
NspI RCATGY 1 cut(s) 1702
OliI CACNNNNGTG 1 cut(s) 426
PaeR7I CTCGAG 1 cut(s) 1815
PagI TCATGA 3 cut(s) 1579, 1723, 1885
PaqCI CACCTGC 1 cut(s) 686
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 1 cut(s) 1606
PdmI GAANNNNTTC 1 cut(s) 797
PfeI GAWTC 3 cut(s) 295, 678, 1384
PflMI CCANNNNNTGG 2 cut(s) 1253, 1346
PfoI TCCNGGA 2 cut(s) 667, 1294
PkrI GCNGC 8 cut(s) 474, 477, 492, 855, 979, 1362, 2031, 2034
Ple19I CGATCG 1 cut(s) 1828
PleI GAGTC 1 cut(s) 1534
PpsI GAGTC 1 cut(s) 1534
PpuMI RGGWCCY 2 cut(s) 100, 1932
PshAI GACNNNNGTC 1 cut(s) 2049
Psp124BI GAGCTC 1 cut(s) 1303
Psp1406I AACGTT 1 cut(s) 1810
Psp5II RGGWCCY 2 cut(s) 100, 1932
Psp6I CCWGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
PspEI GGTNACC 1 cut(s) 931
PspFI CCCAGC 2 cut(s) 980, 1520
PspGI CCWGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
PspN4I GGNNCC 8 cut(s) 19, 222, 923, 966, 1073, 1802, 1934, 1988
PspPPI RGGWCCY 2 cut(s) 100, 1932
PstNI CAGNNNCTG 1 cut(s) 2060
PsuI RGATCY 4 cut(s) 1468, 1646, 1979, 2000
PvuI CGATCG 1 cut(s) 1828
RruI TCGCGA 1 cut(s) 1824
RsaI GTAC 1 cut(s) 1838
RsaNI GTAC 1 cut(s) 1837
RseI CAYNNNNRTG 7 cut(s) 426, 1418, 1509, 1563, 1728, 1755, 1902
SacI GAGCTC 1 cut(s) 1303
SaqAI TTAA 4 cut(s) 171, 846, 891, 1770
SatI GCNGC 8 cut(s) 473, 476, 491, 854, 978, 1361, 2030, 2033
SchI GAGTC 1 cut(s) 1535
ScrFI CCNGG 7 cut(s) 618, 669, 1110, 1296, 1365, 1494, 1901
SduI GDGCHC 5 cut(s) 423, 469, 1261, 1303, 1899
SexAI ACCWGGT 1 cut(s) 616
SfcI CTRYAG 1 cut(s) 883
SfiI GGCCNNNNNGGCC 1 cut(s) 50
Sfr274I CTCGAG 1 cut(s) 1815
SinI GGWCC 7 cut(s) 100, 569, 665, 1106, 1115, 1932, 1987
SlaI CTCGAG 1 cut(s) 1815
SmiMI CAYNNNNRTG 7 cut(s) 426, 1418, 1509, 1563, 1728, 1755, 1902
SmlI CTYRAG 3 cut(s) 607, 909, 1815
SmoI CTYRAG 3 cut(s) 607, 909, 1815
Sse9I AATT 5 cut(s) 383, 404, 494, 1021, 1081
SsiI CCGC 9 cut(s) 224, 261, 363, 503, 853, 1780, 1990, 2029, 2032
SspMI CTAG 4 cut(s) 299, 1530, 1983, 2004
SstI GAGCTC 1 cut(s) 1303
StyD4I CCNGG 7 cut(s) 616, 667, 1108, 1294, 1363, 1492, 1899
StyI CCWWGG 2 cut(s) 956, 1413
TaaI ACNGT 9 cut(s) 35, 558, 566, 647, 662, 1730, 1894, 1970, 2062
TaiI ACGT 1 cut(s) 1813
TaqI TCGA 4 cut(s) 398, 801, 1774, 1816
TasI AATT 5 cut(s) 383, 404, 494, 1021, 1081
TauI GCSGC 3 cut(s) 856, 2032, 2035
TfiI GAWTC 3 cut(s) 295, 678, 1384
Tru1I TTAA 4 cut(s) 171, 846, 891, 1770
Tru9I TTAA 4 cut(s) 171, 846, 891, 1770
TscAI CASTG 5 cut(s) 667, 688, 734, 820, 2065
TseFI GTSAC 1 cut(s) 1829
TseI GCWGC 5 cut(s) 472, 475, 490, 977, 1360
Tsp45I GTSAC 1 cut(s) 1829
TspDTI ATGAA 5 cut(s) 656, 1323, 1622, 1902, 1920
TspGWI ACGGA 2 cut(s) 30, 755
TspRI CASTG 5 cut(s) 667, 688, 734, 820, 2065
Van91I CCANNNNNTGG 2 cut(s) 1253, 1346
VneI GTGCAC 1 cut(s) 1895
VpaK11BI GGWCC 7 cut(s) 100, 569, 665, 1106, 1115, 1932, 1987
XceI RCATGY 1 cut(s) 1702
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XhoI CTCGAG 1 cut(s) 1815
XmiI GTMKAC 1 cut(s) 1925
XmnI GAANNNNTTC 1 cut(s) 797
XspI CTAG 4 cut(s) 299, 1530, 1983, 2004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.