Rroxscaffold_1G00026880

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0006731
Physical Location & Seq
Reverse (-)
33814433 .. 33819560
5128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00026880.1

Sequence Viewer

Length: 1416 bp
ATGGACGACGGCGACGGAGCCGATCATTTTCACCGTAACGAGGCCATCTCGGCCGTCGCCGACGACGGCTTTTTAGCCGAGGAGGACGACGACTACGAGGACCTCTACAACGATGTGAATGTCGGCGAGGGGTTTTATCAGTCTATGAGAAAGAACGAGGATTTAGGGTTTAAAAACGAGGCCGTGGAGGAGAAGAAGGTTGAGTTGCCGGAGGTTTCGGCTCCGCAACATCAAGGCGCTCCGATACCGAGCTCCGGGGGCGGTGAGGGTAGGGGTTCCGGGTTCGGTAATCAGAATCTAGGGTTTAGAGGGAACGAGATGGGCGCGAAAGGGAGCGGTGGGTTGGGAGGGCCTATTGGTAGCGGAGGTGGGATGAGGATTGAATTAGGGCAAGCGTCGAGTAAATTGAATGAGTTTGAGCACCAAAGTGGGAATAATGTTGGTCTTGGGGTTCAAGGGATTGGTGCTCAGCAGCAGCATCAGCAACAATTACAACCGCAACATCAACCACAATCGCAACTGCAACCTCCACAGCAACATCAACAGTTACACGGTGGTGCTGCTGCTGTTGGGAATGTGGGGAATGAGGGTTTCTTGAGGCAACCTGGTGGTGTCGGAGGGGGGAATGTGAACGGTGTTGGTGGGAACAGTGGTCCAGGAGGAGGATTCGGTGGTGGTGGTGCAGGTGGGGCAACATTGTATGTGGGGGATTTGCACTGGTGGACAACGGATGCAGAGCTGGAGGCGGAGTTGTGCAAGTATGGAGCTGTGAAGGAAGTGAAGTTTTTCGATGAGAAAGCCAGTGGGAAGTCAAAAGGGTATTGCCAGGTAGACTTCTATGATTCTGCTGCTGCCATGGCCTGCAAGGATGGGATGCATGGGCATTTGTTTAATGGGCGGCCATGTGTTGTTGCTTTTGCATCACCCTATAGTGTTAAGAGAATGGGGGAGGCTCAAGTGAATAGGAACCAGCAGGTAACCCAAACTGCACAAGCTCAACCAAGGAGAGGACCTAATGATGCTGCTGGGAATAAAGCTGGTGGGAGTGCCATAACAACAGGTGGGAATTATCAAGGTGGGGATAATAACAGCAGAGGTTATGGGAGAGCTAACTGGGGGCGAGGGAATTCTCAGGGAATGGGAGGTAGAGGTCCAGGTGGTCCAATGAGGAATAGGGGTGGAATGAGTGGCAGAGGTATAATGGGGAATGGTGGAAACGGGTTTGGGCAAGGTATGGGGGCAACCCCTCCTTTGATGCACCCTCAGTCAATGATGGGTCAGGGCTTTGATCCAGCTTTTGGCGCACCAATGGGAAGAATGGGGACTTATGGAGGCTTTCCAGGAGCTCCACAGCCTCCTTTCTCTGGTATGATGTCTTCATTCCCACCGGTGGGGGTGTTGGGCTGCCTGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

471

Amino Acids

48.44

Weight (kDa)

5.57

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 233 - 302 1.6e-11 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 674
Acc36I ACCTGC 2 cut(s) 674, 964
AccB7I CCANNNNNTGG 1 cut(s) 1298
AccBSI CCGCTC 1 cut(s) 336
AccI GTMKAC 1 cut(s) 831
AccII CGCG 1 cut(s) 326
AciI CCGC 7 cut(s) 224, 261, 336, 363, 497, 746, 898
AclWI GGATC 1 cut(s) 1283
AcoI YGGCCR 2 cut(s) 51, 899
AcsI RAATTY 1 cut(s) 1126
AfiI CCNNNNNNNGG 8 cut(s) 40, 254, 662, 1007, 1298, 1364, 1390, 1391
AgeI ACCGGT 1 cut(s) 1387
AgsI TTSAA 3 cut(s) 383, 409, 455
AjnI CCWGG 6 cut(s) 604, 655, 825, 1153, 1339, 1407
AleI CACNNNNGTG 2 cut(s) 426, 555
AluBI AGCT 8 cut(s) 252, 739, 767, 995, 1037, 1109, 1295, 1346
AluI AGCT 8 cut(s) 252, 739, 767, 995, 1037, 1109, 1295, 1346
Alw21I GWGCWC 4 cut(s) 254, 423, 469, 1348
AlwI GGATC 1 cut(s) 1283
AoxI GGCC 6 cut(s) 42, 51, 180, 350, 858, 899
ApeKI GCWGC 8 cut(s) 472, 475, 560, 563, 848, 851, 1022, 1404
ApoI RAATTY 1 cut(s) 1126
AsiGI ACCGGT 1 cut(s) 1387
Asp700I GAANNNNTTC 1 cut(s) 785
AspLEI GCGC 3 cut(s) 239, 326, 1304
AspS9I GGNCC 6 cut(s) 100, 350, 653, 1010, 1151, 1160
AsuC2I CCSGG 2 cut(s) 256, 280
AsuHPI GGTGA 3 cut(s) 23, 275, 915
AvaII GGWCC 5 cut(s) 100, 653, 1010, 1151, 1160
BanII GRGCYC 2 cut(s) 254, 1348
BarI GAAGNNNNNNTAC 2 cut(s) 1360, 1392
BbsI GAAGAC 1 cut(s) 1368
Bbv12I GWGCWC 4 cut(s) 254, 423, 469, 1348
BbvI GCAGC 8 cut(s) 484, 487, 547, 550, 835, 838, 1009, 1391
BccI CCATC 4 cut(s) 53, 313, 863, 1267
BceAI ACGGC 4 cut(s) 25, 38, 82, 167
BciT130I CCWGG 6 cut(s) 606, 657, 827, 1155, 1341, 1409
BcnI CCSGG 2 cut(s) 256, 280
BfaI CTAG 1 cut(s) 299
BfmI CTRYAG 1 cut(s) 928
BfoI RGCGCY 1 cut(s) 240
BfuAI ACCTGC 2 cut(s) 674, 964
BglI GCCNNNNNGGC 1 cut(s) 50
BisI GCNGC 9 cut(s) 473, 476, 561, 564, 849, 852, 899, 1023, 1405
BlpI GCTNAGC 1 cut(s) 468
BlsI GCNGC 9 cut(s) 474, 477, 562, 565, 850, 853, 900, 1024, 1406
Bme1390I CCNGG 8 cut(s) 256, 280, 606, 657, 827, 1155, 1341, 1409
Bme18I GGWCC 5 cut(s) 100, 653, 1010, 1151, 1160
BmgT120I GGNCC 6 cut(s) 100, 350, 653, 1010, 1151, 1160
BmiI GGNNCC 4 cut(s) 19, 222, 277, 968
BmrFI CCNGG 8 cut(s) 256, 280, 606, 657, 827, 1155, 1341, 1409
BmrI ACTGGG 1 cut(s) 1123
BmsI GCATC 6 cut(s) 487, 721, 864, 929, 1009, 1245
BmuI ACTGGG 1 cut(s) 1123
BpiI GAAGAC 1 cut(s) 1368
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpmI CTGGAG 1 cut(s) 761
Bpu1102I GCTNAGC 1 cut(s) 468
BpuEI CTTGAG 2 cut(s) 616, 939
BpuMI CCSGG 2 cut(s) 256, 280
BsaJI CCNNGG 5 cut(s) 78, 183, 255, 855, 1001
BsaWI WCCGGW 1 cut(s) 1387
BsaXI ACNNNNNCTCC 2 cut(s) 734, 764
Bsc4I CCNNNNNNNGG 8 cut(s) 40, 254, 662, 1007, 1298, 1364, 1390, 1391
Bse118I RCCGGY 1 cut(s) 1387
Bse1I ACTGG 3 cut(s) 722, 801, 1118
BseBI CCWGG 6 cut(s) 606, 657, 827, 1155, 1341, 1409
BseDI CCNNGG 5 cut(s) 78, 183, 255, 855, 1001
BseGI GGATG 4 cut(s) 378, 736, 874, 879
BseLI CCNNNNNNNGG 8 cut(s) 40, 254, 662, 1007, 1298, 1364, 1390, 1391
BseMII CTCAG 3 cut(s) 482, 1145, 1277
BseNI ACTGG 3 cut(s) 722, 801, 1118
BseRI GAGGAG 3 cut(s) 95, 203, 675
BseX3I CGGCCG 1 cut(s) 51
BseXI GCAGC 8 cut(s) 484, 487, 547, 550, 835, 838, 1009, 1391
BseYI CCCAGC 1 cut(s) 1025
BsgI GTGCAG 2 cut(s) 702, 972
Bsh1236I CGCG 1 cut(s) 326
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 6 cut(s) 44, 53, 182, 352, 860, 901
BshTI ACCGGT 1 cut(s) 1387
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 4 cut(s) 254, 423, 469, 1348
BsiSI CCGG 4 cut(s) 209, 255, 279, 1388
BslFI GGGAC 1 cut(s) 1336
BslI CCNNNNNNNGG 8 cut(s) 40, 254, 662, 1007, 1298, 1364, 1390, 1391
BsmFI GGGAC 1 cut(s) 1336
BsnI GGCC 6 cut(s) 44, 53, 182, 352, 860, 901
Bsp1286I GDGCHC 4 cut(s) 254, 423, 469, 1348
Bsp143I GATC 2 cut(s) 22, 1288
Bsp1720I GCTNAGC 1 cut(s) 468
Bsp19I CCATGG 1 cut(s) 855
BspACI CCGC 7 cut(s) 224, 261, 336, 363, 497, 746, 898
BspANI GGCC 6 cut(s) 44, 53, 182, 352, 860, 901
BspCNI CTCAG 3 cut(s) 481, 1144, 1276
BspFNI CGCG 1 cut(s) 326
BspLI GGNNCC 4 cut(s) 19, 222, 277, 968
BspMI ACCTGC 2 cut(s) 674, 964
BspPI GGATC 1 cut(s) 1283
BsrBI CCGCTC 1 cut(s) 336
BsrFI RCCGGY 1 cut(s) 1387
BsrI ACTGG 3 cut(s) 722, 801, 1118
BssAI RCCGGY 1 cut(s) 1387
BssECI CCNNGG 5 cut(s) 78, 183, 255, 855, 1001
BssMI GATC 2 cut(s) 22, 1288
BssT1I CCWWGG 2 cut(s) 855, 1001
Bst2UI CCWGG 6 cut(s) 606, 657, 827, 1155, 1341, 1409
Bst4CI ACNGT 5 cut(s) 35, 546, 554, 635, 650
BstC8I GCNNGC 2 cut(s) 393, 862
BstDEI CTNAG 3 cut(s) 468, 1131, 1263
BstDSI CCRYGG 2 cut(s) 183, 855
BstEII GGTNACC 1 cut(s) 976
BstF5I GGATG 4 cut(s) 378, 736, 874, 879
BstFNI CGCG 1 cut(s) 326
BstH2I RGCGCY 1 cut(s) 240
BstHHI GCGC 3 cut(s) 239, 326, 1304
BstKTI GATC 2 cut(s) 25, 1291
BstMBI GATC 2 cut(s) 22, 1288
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 6 cut(s) 50, 258, 481, 689, 857, 1301
BstNI CCWGG 6 cut(s) 606, 657, 827, 1155, 1341, 1409
BstPI GGTNACC 1 cut(s) 976
BstSCI CCNGG 8 cut(s) 254, 278, 604, 655, 825, 1153, 1339, 1407
BstSFI CTRYAG 1 cut(s) 928
BstUI CGCG 1 cut(s) 326
BstV1I GCAGC 8 cut(s) 484, 487, 547, 550, 835, 838, 1009, 1391
BstV2I GAAGAC 1 cut(s) 1368
BstZI CGGCCG 1 cut(s) 51
BsuRI GGCC 6 cut(s) 44, 53, 182, 352, 860, 901
BtgI CCRYGG 2 cut(s) 183, 855
BtsCI GGATG 4 cut(s) 378, 736, 874, 879
BtsIMutI CAGTG 3 cut(s) 655, 715, 808
BveI ACCTGC 2 cut(s) 674, 964
Cac8I GCNNGC 2 cut(s) 393, 862
CfoI GCGC 3 cut(s) 239, 326, 1304
Cfr10I RCCGGY 1 cut(s) 1387
Cfr13I GGNCC 6 cut(s) 100, 350, 653, 1010, 1151, 1160
CseI GACGC 1 cut(s) 384
CsiI ACCWGGT 1 cut(s) 604
CspAI ACCGGT 1 cut(s) 1387
CviAII CATG 3 cut(s) 856, 878, 903
DdeI CTNAG 3 cut(s) 468, 1131, 1263
DpnI GATC 2 cut(s) 24, 1290
DpnII GATC 2 cut(s) 22, 1288
DraI TTTAAA 1 cut(s) 172
EaeI YGGCCR 2 cut(s) 51, 899
EagI CGGCCG 1 cut(s) 51
EciI GGCGGA 1 cut(s) 761
Ecl136II GAGCTC 2 cut(s) 252, 1346
EclXI CGGCCG 1 cut(s) 51
Eco130I CCWWGG 2 cut(s) 855, 1001
Eco24I GRGCYC 2 cut(s) 254, 1348
Eco47I GGWCC 5 cut(s) 100, 653, 1010, 1151, 1160
Eco52I CGGCCG 1 cut(s) 51
Eco53kI GAGCTC 2 cut(s) 252, 1346
Eco91I GGTNACC 1 cut(s) 976
EcoICRI GAGCTC 2 cut(s) 252, 1346
EcoO109I RGGNCCY 3 cut(s) 100, 350, 1010
EcoO65I GGTNACC 1 cut(s) 976
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 6 cut(s) 604, 655, 825, 1153, 1339, 1407
EcoT14I CCWWGG 2 cut(s) 855, 1001
EcoT22I ATGCAT 1 cut(s) 879
EcoT38I GRGCYC 2 cut(s) 254, 1348
ErhI CCWWGG 2 cut(s) 855, 1001
FaeI CATG 3 cut(s) 859, 881, 906
FaqI GGGAC 1 cut(s) 1336
FatI CATG 3 cut(s) 855, 877, 902
FblI GTMKAC 1 cut(s) 831
Fnu4HI GCNGC 9 cut(s) 473, 476, 561, 564, 849, 852, 899, 1023, 1405
FokI GGATG 4 cut(s) 385, 743, 881, 886
FriOI GRGCYC 2 cut(s) 254, 1348
Fsp4HI GCNGC 9 cut(s) 473, 476, 561, 564, 849, 852, 899, 1023, 1405
FspBI CTAG 1 cut(s) 299
GlaI GCGC 3 cut(s) 238, 325, 1303
GluI GCNGC 9 cut(s) 473, 476, 561, 564, 849, 852, 899, 1023, 1405
GsaI CCCAGC 1 cut(s) 1029
GsuI CTGGAG 1 cut(s) 761
HaeII RGCGCY 1 cut(s) 240
HaeIII GGCC 6 cut(s) 44, 53, 182, 352, 860, 901
HapII CCGG 4 cut(s) 209, 255, 279, 1388
HgaI GACGC 1 cut(s) 384
HhaI GCGC 3 cut(s) 239, 326, 1304
Hin1II CATG 3 cut(s) 859, 881, 906
Hin6I GCGC 3 cut(s) 237, 324, 1302
HinP1I GCGC 3 cut(s) 237, 324, 1302
HinfI GANTC 3 cut(s) 295, 666, 842
HpaII CCGG 4 cut(s) 209, 255, 279, 1388
HphI GGTGA 3 cut(s) 23, 275, 915
Hpy166II GTNNAC 3 cut(s) 631, 723, 832
Hpy188I TCNGA 3 cut(s) 243, 294, 617
Hpy188III TCNNGA 1 cut(s) 595
Hpy8I GTNNAC 3 cut(s) 631, 723, 832
Hpy99I CGWCG 7 cut(s) 11, 17, 59, 65, 68, 92, 400
HpyAV CCTTC 2 cut(s) 190, 766
HpyCH4III ACNGT 5 cut(s) 35, 546, 554, 635, 650
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 258, 481, 689, 857, 1301
HpyF3I CTNAG 3 cut(s) 468, 1131, 1263
Hsp92II CATG 3 cut(s) 859, 881, 906
HspAI GCGC 3 cut(s) 237, 324, 1302
Kzo9I GATC 2 cut(s) 22, 1288
LmnI GCTCC 8 cut(s) 17, 226, 244, 257, 333, 764, 1343, 1351
Lsp1109I GCAGC 8 cut(s) 484, 487, 547, 550, 835, 838, 1009, 1391
LweI GCATC 6 cut(s) 487, 721, 864, 929, 1009, 1245
MabI ACCWGGT 1 cut(s) 604
MaeI CTAG 1 cut(s) 299
MaeIII GTNAC 3 cut(s) 35, 546, 976
MalI GATC 2 cut(s) 24, 1290
MbiI CCGCTC 1 cut(s) 336
MboI GATC 2 cut(s) 22, 1288
MboII GAAGA 3 cut(s) 205, 1326, 1368
MhlI GDGCHC 4 cut(s) 254, 423, 469, 1348
MluCI AATT 5 cut(s) 383, 404, 488, 1066, 1126
MmeI TCCRAC 1 cut(s) 595
Mph1103I ATGCAT 1 cut(s) 879
MroXI GAANNNNTTC 1 cut(s) 785
MseI TTAA 3 cut(s) 171, 891, 936
MslI CAYNNNNRTG 2 cut(s) 426, 555
MspI CCGG 4 cut(s) 209, 255, 279, 1388
MspR9I CCNGG 8 cut(s) 256, 280, 606, 657, 827, 1155, 1341, 1409
MvaI CCWGG 6 cut(s) 606, 657, 827, 1155, 1341, 1409
MvnI CGCG 1 cut(s) 326
MwoI GCNNNNNNNGC 6 cut(s) 50, 258, 481, 689, 857, 1301
NciI CCSGG 2 cut(s) 256, 280
NcoI CCATGG 1 cut(s) 855
NdeII GATC 2 cut(s) 22, 1288
NlaIII CATG 3 cut(s) 859, 881, 906
NlaIV GGNNCC 4 cut(s) 19, 222, 277, 968
NmeAIII GCCGAG 2 cut(s) 29, 103
NsiI ATGCAT 1 cut(s) 879
OliI CACNNNNGTG 2 cut(s) 426, 555
PaqCI CACCTGC 1 cut(s) 674
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 785
PfeI GAWTC 3 cut(s) 295, 666, 842
PflMI CCANNNNNTGG 1 cut(s) 1298
PfoI TCCNGGA 2 cut(s) 655, 1339
PinAI ACCGGT 1 cut(s) 1387
PkrI GCNGC 9 cut(s) 474, 477, 562, 565, 850, 853, 900, 1024, 1406
PpuMI RGGWCCY 2 cut(s) 100, 1010
Psp124BI GAGCTC 2 cut(s) 254, 1348
Psp5II RGGWCCY 2 cut(s) 100, 1010
Psp6I CCWGG 6 cut(s) 604, 655, 825, 1153, 1339, 1407
PspEI GGTNACC 1 cut(s) 976
PspFI CCCAGC 1 cut(s) 1025
PspGI CCWGG 6 cut(s) 604, 655, 825, 1153, 1339, 1407
PspN4I GGNNCC 4 cut(s) 19, 222, 277, 968
PspPI GGNCC 6 cut(s) 100, 350, 653, 1010, 1151, 1160
PspPPI RGGWCCY 2 cut(s) 100, 1010
RseI CAYNNNNRTG 2 cut(s) 426, 555
SacI GAGCTC 2 cut(s) 254, 1348
SaqAI TTAA 3 cut(s) 171, 891, 936
SatI GCNGC 9 cut(s) 473, 476, 561, 564, 849, 852, 899, 1023, 1405
Sau3AI GATC 2 cut(s) 22, 1288
Sau96I GGNCC 6 cut(s) 100, 350, 653, 1010, 1151, 1160
ScrFI CCNGG 8 cut(s) 256, 280, 606, 657, 827, 1155, 1341, 1409
SduI GDGCHC 4 cut(s) 254, 423, 469, 1348
SexAI ACCWGGT 1 cut(s) 604
SfaNI GCATC 6 cut(s) 487, 721, 864, 929, 1009, 1245
SfcI CTRYAG 1 cut(s) 928
SfiI GGCCNNNNNGGCC 1 cut(s) 50
SgrAI CRCCGGYG 1 cut(s) 1387
SinI GGWCC 5 cut(s) 100, 653, 1010, 1151, 1160
SmiMI CAYNNNNRTG 2 cut(s) 426, 555
SmlI CTYRAG 2 cut(s) 595, 954
SmoI CTYRAG 2 cut(s) 595, 954
Sse9I AATT 5 cut(s) 383, 404, 488, 1066, 1126
SsiI CCGC 7 cut(s) 224, 261, 336, 363, 497, 746, 898
SspMI CTAG 1 cut(s) 299
SstI GAGCTC 2 cut(s) 254, 1348
StyD4I CCNGG 8 cut(s) 254, 278, 604, 655, 825, 1153, 1339, 1407
StyI CCWWGG 2 cut(s) 855, 1001
TaaI ACNGT 5 cut(s) 35, 546, 554, 635, 650
TaqI TCGA 2 cut(s) 398, 789
TasI AATT 5 cut(s) 383, 404, 488, 1066, 1126
TauI GCSGC 1 cut(s) 901
TfiI GAWTC 3 cut(s) 295, 666, 842
Tru1I TTAA 3 cut(s) 171, 891, 936
Tru9I TTAA 3 cut(s) 171, 891, 936
TscAI CASTG 3 cut(s) 655, 722, 808
TseI GCWGC 8 cut(s) 472, 475, 560, 563, 848, 851, 1022, 1404
TspDTI ATGAA 1 cut(s) 1368
TspGWI ACGGA 2 cut(s) 30, 743
TspRI CASTG 3 cut(s) 655, 722, 808
Van91I CCANNNNNTGG 1 cut(s) 1298
VpaK11BI GGWCC 5 cut(s) 100, 653, 1010, 1151, 1160
XapI RAATTY 1 cut(s) 1126
XmiI GTMKAC 1 cut(s) 831
XmnI GAANNNNTTC 1 cut(s) 785
XspI CTAG 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.