FvH4_3g29340

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0006731
Physical Location & Seq
Forward (+)
22433528 .. 22438787
5260 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29340.t2

Sequence Viewer

Length: 2019 bp
ATGGACGACGGCGACGGAGCCGACCACATGGATCAGTTCCACCGCAACGAGGCCATCTCCGCCGTCGCCGACGACGGCTTTCTTGCCGAGGAGGACGACGACTACGAGGACCTTTACAACGATGTCAATGTCGGCGAGGGGTTTTATCAGTCTATGAGAAAGAACGAGGCGGCGGTGGCGGAGGAGAAGAAGGTGGACTTGCCGGAGGTCTCGGCCGCCCAGCTACATCAAGGGGCTCCGATACCGAGTTCCGGAGGGGGTGCTGGGTTTGGGAATCAGAATCTAGGGTTTAGAGGGAACGAGATGAAAGGGCCGGTTGGCGGTGGAGGTGGGATGAGGATTGAATTAGGGCAAGCGTCGAGTAAATTGAATGAGTTTGAGCAGCAAAGTGGGGCTCAAGGGATGGGTGCTCAGCAGCAACAATTACAACCGCAATCGCAGCCTCCGCAGCAACAGTTACATGGTGGTGGTGCTGCTGGGAATGTGGGAAATGAGGGTTTCTTGAGGCAACCTGGTGGTGTCGGAGGGGGGAATGTGAACGGTGTCGGTGGGAATAGTGGTCCGGGAGGAGGATTCGGTGGAGGTGCTGCTGGTGGGGCGACATTGTATGTGGGGGACTTGCACTGGTGGACGACAGATGCAGAGCTGGAGGCAGAGTTGTGCAAGTATGGACAAGTGAAGGAAGTGAAGTTTTACGAAGAGAAAGCCAGTGGGAAGTCTAAAGGATATTGCCAGGTAGATTTCTATGATTCTGCTGCTGCCATGGCCTGCAAGGAGGGAATGCATGGGCATTTGTTAAATGGGCGGCCGTGTGTTGTTGCTATAACAACACCATATAGTGTTAAGAGAATGGGGGAGGCTCAAGTGAATAGGAACCAACAGGTATCCCAAACTGCACAAGTTCAACCAAGGAGGGGGCCTAATGATGCTGCTGGGAATAAAGCTGGTGGGAGTGCCATTACGACTGGTGGGAATTATCAAGGTGGGGATAATAACAACAGAGGTTATGGGAGAGCTAACTGGGGCCGAGGTAATTCTCAGGGTATGGGAGGTAGAGGTCCAGGTGGTCCAATGAGGAATAGGGGTGGGATGAGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGGTTTGGGCAAGGTATTGGTGCAACCCCTCCTTTGATACACCCTCAGTCAATGATGGGTCAGGGCTTTGATCCAGCTTTTGGGGCTCCAATGGGAAGAATGGGGAGTTACGGAGGCTTTCCAGGAGCTCCACAGCCTCCTTTCTCAGGGATGATGTCTTCATTCCCACCTGTGGGGGGTGTTGGGCTGCCTGGAGTAGCCCCTCATGTGAATCCTGCATTTTTTGGACGTATGCCCATGAGTGGAATGGGAATGATGCCAACATCAGGTGTTGATGGGCCTAATATGGGAATGTGGCCAGATCCTAGTATGGGGGGTGGATGGCCTGGTGAGGAGCATGGTGGTGGCAGAGCTGGGGAGTCTAGTTATGGTGAAGAAGCTGGTTCTGATCATCAATATGGTGAGGCTAGTCATGATAGAGGTGGGTGGCAGAATACCATGAAGGAGAAAGATAGAGGTTCAGAGAGGGACTGGTCTGGATCTTCTGACAGGAGGTATCGGGAAGATAGGGACCAAGGGTTTGACAGAGACATGCCGAGAGAAAAAGATGTGGGTCATGACCATGAATGGACTGAAAGAAGGCATCGTAATGATGTAGATGTTAATCGAGAGAGGGACAGAGAGCGTGACAGAGAGCGTGACAGGGGTCGAGAACGTTCTCGAGATCACGATCGTGAAAGGTACAGGGAAGATAGAGAAAGATATGCTGATCATCATAAATACAGAGATCGTGAAATGGTCCACCAGGATGAAACTGAGAGGGGGCGGTCAACAAGGACTCATAGTAAGGCACGCTTACCTGAAGATGATGACCGTCGTTCAAGATCTAGGGATCGCCGTTCAAGATCTAGGGATGTTGATTATGGGAAGAGGCGGCGGCTTACTTCTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

673

Amino Acids

72.61

Weight (kDa)

5.97

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 202 - 271 2.7e-11 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1205
AccIII TCCGGA 1 cut(s) 251
AclI AACGTT 1 cut(s) 1780
AclWI GGATC 5 cut(s) 39, 1190, 1421, 1612, 1965
AcoI YGGCCR 3 cut(s) 213, 806, 1421
AcuI CTGAAG 1 cut(s) 1947
AfaI GTAC 1 cut(s) 1808
AgsI TTSAA 5 cut(s) 344, 370, 905, 1947, 1968
AjnI CCWGG 7 cut(s) 511, 732, 1060, 1246, 1315, 1450, 1869
AleI CACNNNNGTG 1 cut(s) 1797
AluBI AGCT 8 cut(s) 223, 646, 944, 1016, 1202, 1253, 1478, 1505
AluI AGCT 8 cut(s) 223, 646, 944, 1016, 1202, 1253, 1478, 1505
Alw21I GWGCWC 2 cut(s) 412, 1255
Alw26I GTCTC 2 cut(s) 214, 1647
AlwI GGATC 5 cut(s) 39, 1190, 1421, 1612, 1965
Ama87I CYCGRG 1 cut(s) 1785
Aor13HI TCCGGA 1 cut(s) 251
ArsI GACNNNNNNTTYG 2 cut(s) 1628, 1660
AsuC2I CCSGG 1 cut(s) 564
AsuHPI GGTGA 3 cut(s) 1466, 1508, 1538
AvaI CYCGRG 1 cut(s) 1785
AvaII GGWCC 6 cut(s) 109, 560, 1058, 1067, 1636, 1864
BalI TGGCCA 1 cut(s) 1423
BanII GRGCYC 4 cut(s) 238, 397, 1213, 1255
BbsI GAAGAC 1 cut(s) 1275
Bbv12I GWGCWC 2 cut(s) 412, 1255
BccI CCATC 5 cut(s) 62, 397, 1174, 1394, 1440
BceAI ACGGC 5 cut(s) 25, 47, 91, 793, 1947
BciT130I CCWGG 7 cut(s) 513, 734, 1062, 1248, 1317, 1452, 1871
BciVI GTATCC 1 cut(s) 895
BclI TGATCA 2 cut(s) 1513, 1834
BcnI CCSGG 1 cut(s) 564
BcoDI GTCTC 2 cut(s) 214, 1647
BfaI CTAG 6 cut(s) 284, 1431, 1488, 1533, 1953, 1974
BfuI GTATCC 1 cut(s) 895
BglII AGATCT 2 cut(s) 1949, 1970
BlpI GCTNAGC 1 cut(s) 411
Bme1390I CCNGG 8 cut(s) 513, 564, 734, 1062, 1248, 1317, 1452, 1871
Bme18I GGWCC 6 cut(s) 109, 560, 1058, 1067, 1636, 1864
BmeT110I CYCGRG 1 cut(s) 1785
BmiI GGNNCC 7 cut(s) 19, 237, 875, 918, 1025, 1212, 1637
BmrFI CCNGG 8 cut(s) 513, 564, 734, 1062, 1248, 1317, 1452, 1871
BmrI ACTGGG 1 cut(s) 1030
BmsI GCATC 4 cut(s) 628, 916, 1371, 1717
BmuI ACTGGG 1 cut(s) 1030
BoxI GACNNNNGTC 1 cut(s) 1770
BpiI GAAGAC 1 cut(s) 1275
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpmI CTGGAG 2 cut(s) 668, 1338
Bpu1102I GCTNAGC 1 cut(s) 411
BpuEI CTTGAG 3 cut(s) 381, 523, 846
BpuMI CCSGG 1 cut(s) 564
BsaBI GATNNNNATC 2 cut(s) 1728, 1794
BsaI GGTCTC 1 cut(s) 214
BsaJI CCNNGG 5 cut(s) 87, 762, 908, 1027, 1639
BsaWI WCCGGW 1 cut(s) 251
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bse118I RCCGGY 1 cut(s) 313
Bse1I ACTGG 5 cut(s) 629, 708, 970, 1025, 1601
Bse8I GATNNNNATC 2 cut(s) 1728, 1794
BseAI TCCGGA 1 cut(s) 251
BseBI CCWGG 7 cut(s) 513, 734, 1062, 1248, 1317, 1452, 1871
BseDI CCNNGG 5 cut(s) 87, 762, 908, 1027, 1639
BseGI GGATG 7 cut(s) 339, 408, 1095, 1281, 1451, 1879, 1984
BseJI GATNNNNATC 2 cut(s) 1728, 1794
BseMII CTCAG 6 cut(s) 425, 1052, 1184, 1284, 1872, 2004
BseNI ACTGG 5 cut(s) 629, 708, 970, 1025, 1601
BseRI GAGGAG 4 cut(s) 104, 197, 582, 1472
BseX3I CGGCCG 2 cut(s) 213, 806
BseYI CCCAGC 5 cut(s) 219, 263, 476, 932, 1478
BsgI GTGCAG 1 cut(s) 879
Bsh1285I CGRYCG 3 cut(s) 216, 809, 1798
BsiEI CGRYCG 3 cut(s) 216, 809, 1798
BsiHKAI GWGCWC 2 cut(s) 412, 1255
BsiHKCI CYCGRG 1 cut(s) 1785
BsiSI CCGG 4 cut(s) 203, 252, 314, 563
BslFI GGGAC 4 cut(s) 629, 1607, 1649, 1754
BsmAI GTCTC 2 cut(s) 214, 1647
BsmFI GGGAC 4 cut(s) 629, 1607, 1649, 1754
BsmI GAATGC 1 cut(s) 786
Bso31I GGTCTC 1 cut(s) 214
BsoBI CYCGRG 1 cut(s) 1785
Bsp1286I GDGCHC 5 cut(s) 238, 397, 412, 1213, 1255
Bsp13I TCCGGA 1 cut(s) 251
Bsp1720I GCTNAGC 1 cut(s) 411
Bsp19I CCATGG 1 cut(s) 762
BspCNI CTCAG 6 cut(s) 424, 1051, 1183, 1283, 1873, 2005
BspEI TCCGGA 1 cut(s) 251
BspHI TCATGA 2 cut(s) 1537, 1681
BspLI GGNNCC 7 cut(s) 19, 237, 875, 918, 1025, 1212, 1637
BspPI GGATC 5 cut(s) 39, 1190, 1421, 1612, 1965
BspTNI GGTCTC 1 cut(s) 214
BsrFI RCCGGY 1 cut(s) 313
BsrI ACTGG 5 cut(s) 629, 708, 970, 1025, 1601
BssAI RCCGGY 1 cut(s) 313
BssECI CCNNGG 5 cut(s) 87, 762, 908, 1027, 1639
BssT1I CCWWGG 3 cut(s) 762, 908, 1639
Bst2UI CCWGG 7 cut(s) 513, 734, 1062, 1248, 1317, 1452, 1871
Bst4CI ACNGT 3 cut(s) 456, 542, 1940
Bst6I CTCTTC 2 cut(s) 693, 1988
BstC8I GCNNGC 3 cut(s) 354, 769, 1918
BstDEI CTNAG 6 cut(s) 411, 1038, 1170, 1270, 1881, 2013
BstDSI CCRYGG 1 cut(s) 762
BstENI CCTNNNNNAGG 1 cut(s) 1269
BstF5I GGATG 7 cut(s) 339, 408, 1095, 1281, 1451, 1879, 1984
BstMAI GTCTC 2 cut(s) 214, 1647
BstMCI CGRYCG 3 cut(s) 216, 809, 1798
BstMWI GCNNNNNNNGC 8 cut(s) 59, 176, 439, 445, 448, 596, 764, 1208
BstNI CCWGG 7 cut(s) 513, 734, 1062, 1248, 1317, 1452, 1871
BstNSI RCATGY 1 cut(s) 1660
BstPAI GACNNNNGTC 1 cut(s) 1770
BstSCI CCNGG 8 cut(s) 511, 562, 732, 1060, 1246, 1315, 1450, 1869
BstV2I GAAGAC 1 cut(s) 1275
BstX2I RGATCY 4 cut(s) 1426, 1604, 1949, 1970
BstYI RGATCY 4 cut(s) 1426, 1604, 1949, 1970
BstZI CGGCCG 2 cut(s) 213, 806
BsuI GTATCC 1 cut(s) 895
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 7 cut(s) 339, 408, 1095, 1281, 1451, 1879, 1984
BtsIMutI CAGTG 2 cut(s) 622, 715
Cac8I GCNNGC 3 cut(s) 354, 769, 1918
CciI TCATGA 2 cut(s) 1537, 1681
Cfr10I RCCGGY 1 cut(s) 313
CseI GACGC 1 cut(s) 345
CsiI ACCWGGT 1 cut(s) 511
Csp6I GTAC 1 cut(s) 1807
CviQI GTAC 1 cut(s) 1807
DdeI CTNAG 6 cut(s) 411, 1038, 1170, 1270, 1881, 2013
EaeI YGGCCR 3 cut(s) 213, 806, 1421
EagI CGGCCG 2 cut(s) 213, 806
Eam1104I CTCTTC 2 cut(s) 693, 1988
EarI CTCTTC 2 cut(s) 693, 1988
EciI GGCGGA 2 cut(s) 49, 194
Ecl136II GAGCTC 1 cut(s) 1253
EclXI CGGCCG 2 cut(s) 213, 806
Eco130I CCWWGG 3 cut(s) 762, 908, 1639
Eco24I GRGCYC 4 cut(s) 238, 397, 1213, 1255
Eco31I GGTCTC 1 cut(s) 214
Eco47I GGWCC 6 cut(s) 109, 560, 1058, 1067, 1636, 1864
Eco52I CGGCCG 2 cut(s) 213, 806
Eco53kI GAGCTC 1 cut(s) 1253
Eco57I CTGAAG 1 cut(s) 1947
Eco88I CYCGRG 1 cut(s) 1785
EcoICRI GAGCTC 1 cut(s) 1253
EcoNI CCTNNNNNAGG 1 cut(s) 1269
EcoO109I RGGNCCY 2 cut(s) 109, 917
EcoRII CCWGG 7 cut(s) 511, 732, 1060, 1246, 1315, 1450, 1869
EcoT14I CCWWGG 3 cut(s) 762, 908, 1639
EcoT22I ATGCAT 1 cut(s) 786
EcoT38I GRGCYC 4 cut(s) 238, 397, 1213, 1255
ErhI CCWWGG 3 cut(s) 762, 908, 1639
FalI AAGNNNNNCTT 4 cut(s) 182, 214, 1904, 1936
FaqI GGGAC 4 cut(s) 629, 1607, 1649, 1754
FbaI TGATCA 2 cut(s) 1513, 1834
FokI GGATG 7 cut(s) 346, 415, 1102, 1288, 1458, 1886, 1991
FriOI GRGCYC 4 cut(s) 238, 397, 1213, 1255
FspBI CTAG 6 cut(s) 284, 1431, 1488, 1533, 1953, 1974
GsaI CCCAGC 5 cut(s) 223, 267, 480, 936, 1482
GsuI CTGGAG 2 cut(s) 668, 1338
HapII CCGG 4 cut(s) 203, 252, 314, 563
HgaI GACGC 1 cut(s) 345
HincII GTYRAC 1 cut(s) 1896
HindII GTYRAC 1 cut(s) 1896
HinfI GANTC 7 cut(s) 274, 280, 573, 749, 1336, 1484, 1903
HpaII CCGG 4 cut(s) 203, 252, 314, 563
HphI GGTGA 3 cut(s) 1466, 1508, 1538
Hpy166II GTNNAC 5 cut(s) 196, 538, 630, 1867, 1896
Hpy188I TCNGA 7 cut(s) 240, 279, 524, 1513, 1588, 1612, 2014
Hpy8I GTNNAC 5 cut(s) 196, 538, 630, 1867, 1896
Hpy99I CGWCG 8 cut(s) 11, 17, 68, 74, 77, 101, 361, 1944
HpyAV CCTTC 4 cut(s) 184, 673, 1561, 1698
HpyCH4III ACNGT 3 cut(s) 456, 542, 1940
HpyCH4IV ACGT 2 cut(s) 1354, 1780
HpyCH4V TGCA 8 cut(s) 622, 641, 663, 771, 784, 896, 1148, 1343
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 176, 439, 445, 448, 596, 764, 1208
HpyF3I CTNAG 6 cut(s) 411, 1038, 1170, 1270, 1881, 2013
HpySE526I ACGT 2 cut(s) 1354, 1780
Kpn2I TCCGGA 1 cut(s) 251
Ksp22I TGATCA 2 cut(s) 1513, 1834
LmnI GCTCC 6 cut(s) 17, 241, 1216, 1250, 1258, 1459
LweI GCATC 4 cut(s) 628, 916, 1371, 1717
MabI ACCWGGT 1 cut(s) 511
MaeI CTAG 6 cut(s) 284, 1431, 1488, 1533, 1953, 1974
MaeII ACGT 2 cut(s) 1354, 1780
MaeIII GTNAC 4 cut(s) 456, 1232, 1751, 1763
MflI RGATCY 4 cut(s) 1426, 1604, 1949, 1970
MhlI GDGCHC 5 cut(s) 238, 397, 412, 1213, 1255
MlsI TGGCCA 1 cut(s) 1423
MluCI AATT 5 cut(s) 344, 365, 422, 973, 1033
MluNI TGGCCA 1 cut(s) 1423
MlyI GAGTC 2 cut(s) 1493, 1897
MmeI TCCRAC 1 cut(s) 502
Mox20I TGGCCA 1 cut(s) 1423
Mph1103I ATGCAT 1 cut(s) 786
MroI TCCGGA 1 cut(s) 251
MscI TGGCCA 1 cut(s) 1423
MseI TTAA 3 cut(s) 797, 843, 1728
MslI CAYNNNNRTG 7 cut(s) 465, 1467, 1521, 1686, 1713, 1797, 1872
Msp20I TGGCCA 1 cut(s) 1423
MspI CCGG 4 cut(s) 203, 252, 314, 563
MspR9I CCNGG 8 cut(s) 513, 564, 734, 1062, 1248, 1317, 1452, 1871
Mva1269I GAATGC 1 cut(s) 786
MvaI CCWGG 7 cut(s) 513, 734, 1062, 1248, 1317, 1452, 1871
MwoI GCNNNNNNNGC 8 cut(s) 59, 176, 439, 445, 448, 596, 764, 1208
NciI CCSGG 1 cut(s) 564
NcoI CCATGG 1 cut(s) 762
NlaIV GGNNCC 7 cut(s) 19, 237, 875, 918, 1025, 1212, 1637
NmeAIII GCCGAG 4 cut(s) 112, 191, 1052, 1686
NmuCI GTSAC 2 cut(s) 1751, 1763
NsiI ATGCAT 1 cut(s) 786
NspI RCATGY 1 cut(s) 1660
OliI CACNNNNGTG 1 cut(s) 1797
PaeR7I CTCGAG 1 cut(s) 1785
PagI TCATGA 2 cut(s) 1537, 1681
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PctI GAATGC 1 cut(s) 786
PfeI GAWTC 5 cut(s) 274, 280, 573, 749, 1336
PflMI CCANNNNNTGG 1 cut(s) 1205
PfoI TCCNGGA 2 cut(s) 562, 1246
Ple19I CGATCG 1 cut(s) 1798
PleI GAGTC 2 cut(s) 1492, 1897
PpsI GAGTC 2 cut(s) 1492, 1897
PpuMI RGGWCCY 1 cut(s) 109
PshAI GACNNNNGTC 1 cut(s) 1770
Psp124BI GAGCTC 1 cut(s) 1255
Psp1406I AACGTT 1 cut(s) 1780
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 7 cut(s) 511, 732, 1060, 1246, 1315, 1450, 1869
PspFI CCCAGC 5 cut(s) 219, 263, 476, 932, 1478
PspGI CCWGG 7 cut(s) 511, 732, 1060, 1246, 1315, 1450, 1869
PspN4I GGNNCC 7 cut(s) 19, 237, 875, 918, 1025, 1212, 1637
PspPPI RGGWCCY 1 cut(s) 109
PsuI RGATCY 4 cut(s) 1426, 1604, 1949, 1970
PvuI CGATCG 1 cut(s) 1798
RsaI GTAC 1 cut(s) 1808
RsaNI GTAC 1 cut(s) 1807
RseI CAYNNNNRTG 7 cut(s) 465, 1467, 1521, 1686, 1713, 1797, 1872
SacI GAGCTC 1 cut(s) 1255
SaqAI TTAA 3 cut(s) 797, 843, 1728
SchI GAGTC 2 cut(s) 1493, 1897
ScrFI CCNGG 8 cut(s) 513, 564, 734, 1062, 1248, 1317, 1452, 1871
SduI GDGCHC 5 cut(s) 238, 397, 412, 1213, 1255
SexAI ACCWGGT 1 cut(s) 511
SfaNI GCATC 4 cut(s) 628, 916, 1371, 1717
Sfr274I CTCGAG 1 cut(s) 1785
SinI GGWCC 6 cut(s) 109, 560, 1058, 1067, 1636, 1864
SlaI CTCGAG 1 cut(s) 1785
SmiMI CAYNNNNRTG 7 cut(s) 465, 1467, 1521, 1686, 1713, 1797, 1872
SmlI CTYRAG 4 cut(s) 396, 502, 861, 1785
SmoI CTYRAG 4 cut(s) 396, 502, 861, 1785
Sse9I AATT 5 cut(s) 344, 365, 422, 973, 1033
SspMI CTAG 6 cut(s) 284, 1431, 1488, 1533, 1953, 1974
SstI GAGCTC 1 cut(s) 1255
StyD4I CCNGG 8 cut(s) 511, 562, 732, 1060, 1246, 1315, 1450, 1869
StyI CCWWGG 3 cut(s) 762, 908, 1639
TaaI ACNGT 3 cut(s) 456, 542, 1940
TaiI ACGT 2 cut(s) 1357, 1783
TaqI TCGA 4 cut(s) 359, 1732, 1774, 1786
TasI AATT 5 cut(s) 344, 365, 422, 973, 1033
TauI GCSGC 5 cut(s) 173, 218, 808, 2002, 2005
TfiI GAWTC 5 cut(s) 274, 280, 573, 749, 1336
Tru1I TTAA 3 cut(s) 797, 843, 1728
Tru9I TTAA 3 cut(s) 797, 843, 1728
TscAI CASTG 2 cut(s) 629, 715
TseFI GTSAC 2 cut(s) 1751, 1763
Tsp45I GTSAC 2 cut(s) 1751, 1763
TspDTI ATGAA 5 cut(s) 320, 1275, 1580, 1704, 1890
TspGWI ACGGA 2 cut(s) 30, 1251
TspRI CASTG 2 cut(s) 629, 715
Van91I CCANNNNNTGG 1 cut(s) 1205
VpaK11BI GGWCC 6 cut(s) 109, 560, 1058, 1067, 1636, 1864
XagI CCTNNNNNAGG 1 cut(s) 1269
XceI RCATGY 1 cut(s) 1660
XcmI CCANNNNNNNNNTGG 1 cut(s) 1369
XhoI CTCGAG 1 cut(s) 1785
XspI CTAG 6 cut(s) 284, 1431, 1488, 1533, 1953, 1974
Zsp2I ATGCAT 1 cut(s) 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.