pycom11g17270

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0006731
Physical Location & Seq
Forward (+)
19418316 .. 19420457
2142 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g17270.1

Sequence Viewer

Length: 2142 bp
ATGGATGAAGGCGACGGGGTCGATCAGATGGATCAGTTTCACCGCAACGAGGCGATCTCGGCGGTGGCTGACGATGGATTTTTGGCCGAGGAGGACGATGATTATGAGGACCTTTACAACGACGTCAATGTCGGCGAGGGGTTTTATCAGTCTATGAGAAAGAACGAGGATTTAGGGTTTAGGAATGAGGTGGTGGAGGAGAAGAAGGTTGAGGTTGAGTCACCCGATGTTGCGCCGTCGGAATCTCAAGGTGGTCCGATACCGGGTGTTGGGGGCGGTAACGGCGAGGGGACTGGTGGGGATGGGGGTGATGGAGGGGTTAGGGGTTCTGGGTATAATAATCAGAATCTAGGGTTTAGAGGGAACGAGATGGGTGCGAAGGGGAGTGGTGGGTTGGGGCCCGTTGGGGGCAGCGGAGGAGGTGGGATTAGGGTTGAATTAGGGCAATCATCAAATAAGGTGAATGAGTTTGAGCAACAAAGTGGGAATAATAGTGGTGTTGGGGTTCAAGGGATTGTTTCTCAGCAGCTGGCGCCCCAATTGCAACAACACCACCAACCACAACCTCCGCCACAACAGCAACAATTACATGGTGCTGCTGTTGTTGGGAATATGGGGAATGAGGGCATGTTGAGACAAGCTGGTGGTGTTGGAAGTGGTAATATGAATGGGATTGGTGGGAATAGTGGTCCGGGGGGAGGATTTGGTGGTGCCGCTGGTGGTGGAGCTGGGACAATATTGTTTGTGGGTGATTTGCATTGGTGGACTACGGATGCAGAGCTGGAGGCAGAGTTGTGTAAGTATGGACCTGTGAAGGAAGTGAAGTTTTTCGACGAGAAAGCAAGTGGGAAGTCAAAAGGGTACTGTCAAGTTGAGTTTTTTAATCCTAATTCTGCCACGGCCTGCAAGGAAGGGATGCACGGGCATGTGTTTAATGGGCGGCCATGCGTTGTTGCGTTCGCATCACCATTCAGTGTTAAGAGAATGGGGGAGGCTCAAGTAAATAGGAACCAGCAGGTTGCCCAAACTGCAGTACCTCAAACTGGTGGGAGGAGGGGGCCCAACGAAGCCGGGAATAAAACTGGTGGGAGTAACATTGCGACTGGTGGGAATTATCAAGGCGGGGAGAGTAATAGAGGTTATGGGAGAGGTAACTGGGGGAGAGGTAATTCTCAGGGTATGGGAAATAGAGGACCAGTTGGTCCAAGGAATAGGGGTGTGATTGGAAGGGGTATAATGAGTAATGGTGGAAATGGGTTTGGGCAAGGTATTGGTGCAACCCCTCCTATGATGCACCCTCAGTCAATGATGGGTCAGGGTTTTGATCCTGCTTTTGGTGCTCCAATGGGGAGAATGGGAAATTATGGAGGCTTTCCTGGTGCTCCTACGCCTCCTTTCTCAGGAATTTTGTCTTCATTTCCACCTGGGGGTGTTGGGCTACCTGGAGTAGCCCCTCATGTGAATCCTGCATTTTTTGGAAGAGGAATGCCCATGAATGGAATGGGAATGATGCCCACATCAGGTGTTGATGGGCCTAATATGGGGATGTGGTCCGATCCTAATATGGGTGGATGGGCTGGTGAAGAGCATGGTGGTGGCAGAGTTGGGGAGTCTAGTTATGGTGAGGAAGCTGCTTCTGACCATCAATATGGTGAGGTTAGTCATGATAGAGGAGGTGCATGGCCAAATGCCATGAAGGAGAAAGATAGAGGTTCAGAGAGGGACTGGTCTGGATCTTCTGATAGAAGGTATCGGGATGATAGAGATCAGGGATATGAGAGAGATGTGCCTAGAGAGAAAGAGGTGGCTCATGACCATGACTTATCTGAAAGAAGGTATCGTGATGATGTTGATGTTAGTCGAGAACGGGACAGAAATCGTGATAGGGGCCGAGAACGTTCTCGAGATCGTGATCGTGACAGAGATCGTGAACGAGAACGGGACCGTGACAGGTACAGGGAAGACAGAGACAGATACGCTGATCATCATAAGTATAGAGACCGTGAACAGGACCATGATGATGAATGGGAGCAGGGACGGTCATCGAGGCACAGTAAGGCACGTGTATCTCAAGAAGATGACCGTCGGTCAAGATCAAGGGATGCTGACTATGGGAAGAGAAGGCGGCTTACTTCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

714

Amino Acids

76.58

Weight (kDa)

5.48

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 247 - 316 2e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 128, 1200
AatII GACGTC 1 cut(s) 126
Acc36I ACCTGC 1 cut(s) 1006
AccB1I GGYRCC 2 cut(s) 532, 710
AciI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
AclI AACGTT 1 cut(s) 1897
AclWI GGATC 4 cut(s) 39, 1319, 1550, 1741
AcoI YGGCCR 3 cut(s) 84, 941, 1682
AcsI RAATTY 1 cut(s) 1404
AcvI CACGTG 1 cut(s) 2063
AcyI GRCGYC 2 cut(s) 123, 533
AfaI GTAC 3 cut(s) 863, 1035, 1955
AflIII ACRYGT 1 cut(s) 2062
AgsI TTSAA 2 cut(s) 437, 509
AhdI GACNNNNNGTC 1 cut(s) 2086
AjnI CCWGG 3 cut(s) 1375, 1423, 1441
AluBI AGCT 5 cut(s) 529, 641, 728, 781, 1631
AluI AGCT 5 cut(s) 529, 641, 728, 781, 1631
Alw21I GWGCWC 2 cut(s) 1342, 1384
Alw26I GTCTC 3 cut(s) 628, 1962, 1992
AlwI GGATC 4 cut(s) 39, 1319, 1550, 1741
AlwNI CAGNNNCTG 1 cut(s) 529
Ama87I CYCGRG 1 cut(s) 1902
AoxI GGCC 8 cut(s) 84, 398, 900, 941, 1058, 1532, 1682, 1888
ApaI GGGCCC 2 cut(s) 402, 1062
ApeKI GCWGC 4 cut(s) 411, 526, 596, 1631
ApoI RAATTY 1 cut(s) 1404
Asp700I GAANNNNTTC 1 cut(s) 827
AspLEI GCGC 2 cut(s) 235, 535
AsuC2I CCSGG 3 cut(s) 264, 693, 1072
AsuHPI GGTGA 9 cut(s) 32, 213, 320, 472, 761, 957, 1592, 1634, 1664
AvaI CYCGRG 1 cut(s) 1902
AvaII GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
BaeGI GKGCMC 2 cut(s) 402, 1062
BaeI ACNNNNGTAYC 2 cut(s) 1017, 1050
BalI TGGCCA 1 cut(s) 1684
BanI GGYRCC 2 cut(s) 532, 710
BanII GRGCYC 2 cut(s) 402, 1062
BarI GAAGNNNNNNTAC 1 cut(s) 2113
BbrPI CACGTG 1 cut(s) 2063
BbsI GAAGAC 2 cut(s) 1404, 1968
Bbv12I GWGCWC 2 cut(s) 1342, 1384
BbvI GCAGC 4 cut(s) 423, 538, 583, 1618
BccI CCATC 9 cut(s) 22, 68, 296, 305, 364, 1303, 1523, 1566, 1650
BceAI ACGGC 3 cut(s) 220, 298, 915
BcgI CGANNNNNNTGC 2 cut(s) 356, 390
BciT130I CCWGG 3 cut(s) 1377, 1425, 1443
BclI TGATCA 1 cut(s) 1981
BcnI CCSGG 3 cut(s) 264, 693, 1072
BcoDI GTCTC 3 cut(s) 628, 1962, 1992
BfaI CTAG 3 cut(s) 350, 1614, 1791
BfmI CTRYAG 1 cut(s) 1029
BfoI RGCGCY 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 1006
BisI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
BlsI GCNGC 7 cut(s) 413, 528, 598, 715, 942, 1633, 2127
Bme1390I CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
Bme18I GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
BmeRI GACNNNNNGTC 1 cut(s) 2086
BmeT110I CYCGRG 1 cut(s) 1902
BmiI GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
BmrFI CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
BmuI ACTGGG 1 cut(s) 1165
BpiI GAAGAC 2 cut(s) 1404, 1968
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpmI CTGGAG 2 cut(s) 803, 1464
BpuEI CTTGAG 3 cut(s) 231, 981, 2055
BpuMI CCSGG 3 cut(s) 264, 693, 1072
BsaAI YACGTR 1 cut(s) 2063
BsaBI GATNNNNATC 2 cut(s) 1764, 1911
BsaHI GRCGYC 2 cut(s) 123, 533
BsaI GGTCTC 1 cut(s) 1992
BsaJI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BsaXI ACNNNNNCTCC 2 cut(s) 776, 806
Bse1I ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
Bse3DI GCAATG 1 cut(s) 1095
Bse8I GATNNNNATC 2 cut(s) 1764, 1911
BseBI CCWGG 3 cut(s) 1377, 1425, 1443
BseDI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BseGI GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BseJI GATNNNNATC 2 cut(s) 1764, 1911
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 4 cut(s) 536, 1187, 1313, 1413
BseNI ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
BseRI GAGGAG 5 cut(s) 104, 212, 432, 1066, 1686
BseSI GKGCMC 2 cut(s) 402, 1062
BseXI GCAGC 4 cut(s) 423, 538, 583, 1618
BseYI CCCAGC 1 cut(s) 728
BshFI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BshNI GGYRCC 2 cut(s) 532, 710
BsiHKAI GWGCWC 2 cut(s) 1342, 1384
BsiHKCI CYCGRG 1 cut(s) 1902
BsiSI CCGG 3 cut(s) 263, 692, 1071
BslFI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
BsmAI GTCTC 3 cut(s) 628, 1962, 1992
BsmFI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
Bso31I GGTCTC 1 cut(s) 1992
BsoBI CYCGRG 1 cut(s) 1902
Bsp120I GGGCCC 2 cut(s) 398, 1058
Bsp1286I GDGCHC 4 cut(s) 402, 1062, 1342, 1384
BspACI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
BspANI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BspCNI CTCAG 4 cut(s) 535, 1186, 1312, 1412
BspHI TCATGA 2 cut(s) 1663, 1810
BspLI GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
BspMAI CTGCAG 1 cut(s) 1033
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 4 cut(s) 39, 1319, 1550, 1741
BspQI GCTCTTC 1 cut(s) 1578
BspT107I GGYRCC 2 cut(s) 532, 710
BspTNI GGTCTC 1 cut(s) 1992
BsrDI GCAATG 1 cut(s) 1095
BsrI ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
BssECI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BssNI GRCGYC 2 cut(s) 123, 533
BssT1I CCWWGG 1 cut(s) 1205
Bst2UI CCWGG 3 cut(s) 1377, 1425, 1443
Bst4CI ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
Bst6I CTCTTC 3 cut(s) 1474, 1578, 2111
BstACI GRCGYC 2 cut(s) 123, 533
BstBAI YACGTR 1 cut(s) 2063
BstC8I GCNNGC 2 cut(s) 531, 904
BstDEI CTNAG 4 cut(s) 522, 1173, 1299, 1399
BstDSI CCRYGG 1 cut(s) 897
BstENI CCTNNNNNAGG 1 cut(s) 1398
BstF5I GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BstH2I RGCGCY 1 cut(s) 536
BstHHI GCGC 2 cut(s) 235, 535
BstMAI GTCTC 3 cut(s) 628, 1962, 1992
BstMWI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
BstNI CCWGG 3 cut(s) 1377, 1425, 1443
BstNSI RCATGY 2 cut(s) 631, 929
BstSCI CCNGG 6 cut(s) 262, 691, 1070, 1375, 1423, 1441
BstSFI CTRYAG 1 cut(s) 1029
BstSLI GKGCMC 2 cut(s) 402, 1062
BstV1I GCAGC 4 cut(s) 423, 538, 583, 1618
BstV2I GAAGAC 2 cut(s) 1404, 1968
BstX2I RGATCY 1 cut(s) 1733
BstXI CCANNNNNNTGG 1 cut(s) 1649
BstYI RGATCY 1 cut(s) 1733
BsuRI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BtgI CCRYGG 1 cut(s) 897
BtsCI GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BtsIMutI CAGTG 1 cut(s) 979
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 2 cut(s) 531, 904
CaiI CAGNNNCTG 1 cut(s) 529
CciI TCATGA 2 cut(s) 1663, 1810
CfoI GCGC 2 cut(s) 235, 535
Csp6I GTAC 3 cut(s) 862, 1034, 1954
CviQI GTAC 3 cut(s) 862, 1034, 1954
DdeI CTNAG 4 cut(s) 522, 1173, 1299, 1399
DinI GGCGCC 1 cut(s) 534
DrdI GACNNNNNNGTC 2 cut(s) 128, 1200
DriI GACNNNNNGTC 1 cut(s) 2086
DseDI GACNNNNNNGTC 2 cut(s) 128, 1200
EaeI YGGCCR 3 cut(s) 84, 941, 1682
Eam1104I CTCTTC 3 cut(s) 1474, 1578, 2111
Eam1105I GACNNNNNGTC 1 cut(s) 2086
EarI CTCTTC 3 cut(s) 1474, 1578, 2111
EciI GGCGGA 1 cut(s) 558
Eco130I CCWWGG 1 cut(s) 1205
Eco24I GRGCYC 2 cut(s) 402, 1062
Eco31I GGTCTC 1 cut(s) 1992
Eco47I GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
Eco72I CACGTG 1 cut(s) 2063
Eco88I CYCGRG 1 cut(s) 1902
EcoNI CCTNNNNNAGG 1 cut(s) 1398
EcoO109I RGGNCCY 3 cut(s) 109, 398, 1058
EcoRII CCWGG 3 cut(s) 1375, 1423, 1441
EcoT14I CCWWGG 1 cut(s) 1205
EcoT38I GRGCYC 2 cut(s) 402, 1062
EgeI GGCGCC 1 cut(s) 534
EheI GGCGCC 1 cut(s) 534
ErhI CCWWGG 1 cut(s) 1205
FaqI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
FauI CCCGC 1 cut(s) 1115
FbaI TGATCA 1 cut(s) 1981
Fnu4HI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
FokI GGATG 8 cut(s) 17, 314, 785, 928, 1558, 1584, 1769, 2114
FriOI GRGCYC 2 cut(s) 402, 1062
Fsp4HI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
FspBI CTAG 3 cut(s) 350, 1614, 1791
GlaI GCGC 2 cut(s) 234, 534
GluI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 2 cut(s) 803, 1464
HaeII RGCGCY 1 cut(s) 536
HaeIII GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
HapII CCGG 3 cut(s) 263, 692, 1071
HhaI GCGC 2 cut(s) 235, 535
Hin1I GRCGYC 2 cut(s) 123, 533
Hin6I GCGC 2 cut(s) 233, 533
HinP1I GCGC 2 cut(s) 233, 533
HinfI GANTC 5 cut(s) 218, 242, 346, 1462, 1610
HpaII CCGG 3 cut(s) 263, 692, 1071
HphI GGTGA 9 cut(s) 32, 213, 320, 472, 761, 957, 1592, 1634, 1664
Hpy166II GTNNAC 3 cut(s) 765, 1931, 2006
Hpy8I GTNNAC 3 cut(s) 765, 1931, 2006
Hpy99I CGWCG 5 cut(s) 17, 125, 241, 836, 2088
HpyAV CCTTC 9 cut(s) 199, 373, 808, 905, 1221, 1690, 1740, 1827, 2115
HpyCH4III ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
HpyCH4IV ACGT 3 cut(s) 123, 1897, 2062
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
HpyF3I CTNAG 4 cut(s) 522, 1173, 1299, 1399
HpySE526I ACGT 3 cut(s) 123, 1897, 2062
Hsp92I GRCGYC 2 cut(s) 123, 533
HspAI GCGC 2 cut(s) 233, 533
KasI GGCGCC 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 1981
LguI GCTCTTC 1 cut(s) 1578
LmnI GCTCC 4 cut(s) 725, 1345, 1387, 2029
Lsp1109I GCAGC 4 cut(s) 423, 538, 583, 1618
LweI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
MaeI CTAG 3 cut(s) 350, 1614, 1791
MaeII ACGT 3 cut(s) 123, 1897, 2062
MaeIII GTNAC 6 cut(s) 219, 278, 1091, 1151, 1916, 1946
MboII GAAGA 8 cut(s) 214, 1404, 1491, 1595, 1728, 1973, 2087, 2128
MfeI CAATTG 1 cut(s) 539
MflI RGATCY 1 cut(s) 1733
MhlI GDGCHC 4 cut(s) 402, 1062, 1342, 1384
MlsI TGGCCA 1 cut(s) 1684
MluCI AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
MluNI TGGCCA 1 cut(s) 1684
Mly113I GGCGCC 1 cut(s) 533
MlyI GAGTC 2 cut(s) 227, 1619
MmeI TCCRAC 2 cut(s) 219, 631
Mox20I TGGCCA 1 cut(s) 1684
MroXI GAANNNNTTC 1 cut(s) 827
MscI TGGCCA 1 cut(s) 1684
MseI TTAA 3 cut(s) 882, 933, 978
MslI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
Msp20I TGGCCA 1 cut(s) 1684
MspA1I CMGCKG 3 cut(s) 414, 529, 716
MspI CCGG 3 cut(s) 263, 692, 1071
MspR9I CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
MunI CAATTG 1 cut(s) 539
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 3 cut(s) 1377, 1425, 1443
MwoI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
NarI GGCGCC 1 cut(s) 533
NciI CCSGG 3 cut(s) 264, 693, 1072
NlaIV GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
NmeAIII GCCGAG 3 cut(s) 38, 112, 1916
NmuCI GTSAC 3 cut(s) 219, 1916, 1946
NspI RCATGY 2 cut(s) 631, 929
PaeR7I CTCGAG 1 cut(s) 1902
PagI TCATGA 2 cut(s) 1663, 1810
PciSI GCTCTTC 1 cut(s) 1578
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 3 cut(s) 242, 346, 1462
PflFI GACNNNGTC 1 cut(s) 17
PkrI GCNGC 7 cut(s) 413, 528, 598, 715, 942, 1633, 2127
PleI GAGTC 2 cut(s) 226, 1618
PluTI GGCGCC 1 cut(s) 536
PmaCI CACGTG 1 cut(s) 2063
PmlI CACGTG 1 cut(s) 2063
PpsI GAGTC 2 cut(s) 226, 1618
Ppu21I YACGTR 1 cut(s) 2063
PpuMI RGGWCCY 1 cut(s) 109
Psp1406I AACGTT 1 cut(s) 1897
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 3 cut(s) 1375, 1423, 1441
PspCI CACGTG 1 cut(s) 2063
PspFI CCCAGC 1 cut(s) 728
PspGI CCWGG 3 cut(s) 1375, 1423, 1441
PspN4I GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
PspOMI GGGCCC 2 cut(s) 398, 1058
PspPPI RGGWCCY 1 cut(s) 109
PstI CTGCAG 1 cut(s) 1033
PstNI CAGNNNCTG 1 cut(s) 529
PsuI RGATCY 1 cut(s) 1733
PsyI GACNNNGTC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 3 cut(s) 863, 1035, 1955
RsaNI GTAC 3 cut(s) 862, 1034, 1954
RseI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
SapI GCTCTTC 1 cut(s) 1578
SaqAI TTAA 3 cut(s) 882, 933, 978
SatI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
SchI GAGTC 2 cut(s) 227, 1619
ScrFI CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
SduI GDGCHC 4 cut(s) 402, 1062, 1342, 1384
SfaNI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
SfcI CTRYAG 1 cut(s) 1029
SfoI GGCGCC 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 1902
SinI GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
SlaI CTCGAG 1 cut(s) 1902
SmiMI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
SmlI CTYRAG 4 cut(s) 246, 996, 1902, 2070
SmoI CTYRAG 4 cut(s) 246, 996, 1902, 2070
Sse9I AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
SsiI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
SspDI GGCGCC 1 cut(s) 532
SspI AATATT 1 cut(s) 738
SspMI CTAG 3 cut(s) 350, 1614, 1791
StyD4I CCNGG 6 cut(s) 262, 691, 1070, 1375, 1423, 1441
StyI CCWWGG 1 cut(s) 1205
TaaI ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
TaiI ACGT 3 cut(s) 126, 1900, 2065
TaqI TCGA 5 cut(s) 21, 831, 1861, 1903, 2045
TaqII GACCGA 1 cut(s) 2076
TasI AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
TauI GCSGC 3 cut(s) 716, 943, 2128
TfiI GAWTC 3 cut(s) 242, 346, 1462
Tru1I TTAA 3 cut(s) 882, 933, 978
Tru9I TTAA 3 cut(s) 882, 933, 978
TscAI CASTG 1 cut(s) 979
TseFI GTSAC 3 cut(s) 219, 1916, 1946
TseI GCWGC 4 cut(s) 411, 526, 596, 1631
Tsp45I GTSAC 3 cut(s) 219, 1916, 1946
TspDTI ATGAA 6 cut(s) 21, 680, 1404, 1508, 1709, 2037
TspGWI ACGGA 1 cut(s) 785
TspRI CASTG 1 cut(s) 979
Tth111I GACNNNGTC 1 cut(s) 17
VpaK11BI GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
XagI CCTNNNNNAGG 1 cut(s) 1398
XapI RAATTY 1 cut(s) 1404
XceI RCATGY 2 cut(s) 631, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1498
XhoI CTCGAG 1 cut(s) 1902
XmnI GAANNNNTTC 1 cut(s) 827
XspI CTAG 3 cut(s) 350, 1614, 1791
ZraI GACGTC 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.