Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003840

Physical Location & Seq

Genomic Coordinates Reverse (-)

25591956 .. 25598671

Gene Structure 6716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G63950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3273 bp

ATGGCGGAAAATACGGCCAGCCATAGAAGAAAACCTCGGAGCTTGAACGATCGTCACTACAGTATCCTCCAGGATCTTTCTGCGCCTCCTAGACAGCCTCCCTCTTCTTCTCATGGAGAAGATGAAGAGACGAAGAAGTCCATGATTAAGCTTGCTGGACGACGTCGTCTTTGCAAGGCCTTGCCAAAGGAAGACGAAGCTGATGGATATGACGATCCTGATTTGGTTGATTTCTATTCCCCAGTTAAAGGAGAGACATCACTAGACAGCGCTGGAATTGGGAACAAATTCACATCTTGGGATGAATCAAAGGAAGCTAACACTGAGCTGGCTGGCGAGCCTAACTTTTCGATAATCACAGACTTTTGTTCGCCCTCACCTCAGTTGAAGCAAAAAGAGGAAATGCAAGGTGATGGAGGAAGGAACGAGATCATGGGTATTTTGGATGATTTGACCTCTAAGCTTGGGACAATGTCGATTCAGAAGAAGAAGGATAGCCAAAGCAATGATTTTGATGCATGTGGAGTGAAGAGCCAGGTTGATAAATTTGATTTTGAGGATGCCAAATCCTCATTTTCCTTGCTATCGGATCTATCTAAGTCCTCACCAGATGTGGTTACCACATATAATGCTGGCGTTAATAGTATCAAGGACAAGCAAGGCAAATCTGGTTTTGCCATCCGGGAAGAGCAAACTAGTAAGGAATTTTCAAGGGAATGGGAAGAAAGAATTTCGAATGTTGGAAAGCAAAACTCATATTCTGGTCGGCACTTTGACGATAACTCTGAAGATAATAGGCAGGGATACAATCTTGACCGTGGGAAGAGCCAATGCAAGGAAGTCGACCAAAGTATGAAGACGACCAGGCACATAGAGGTAAGTGAGAAGATAAGAACAGTCGGAAGGTCTAATGCTGCCAAGCTAAGAGACTTAGACGAGGATGATGATGATGATGACTGTCTCATTTTGTCCGGGAAAAAGGCGGCTGAAATGAAAATTAATAAGCCAGCTCGGTCTTATAACGCCAAAAGACATGGTTATGATGAGAGATCGTTGGAAGATGAAGGGTCTATCACTTTAACTGGCCTCAATTTGTCTTACACATTGCCTGGAAAGATTGCAACAATGTTATATCCACATCAGAGGGAAGGGTTGAATTGGCTTTGGTCATTGCATACCCAAGGGAAAGGTGGAATACTTGGAGATGATATGGGTTTAGGTAAAACTATGCAGATTTGTAGTTTTCTTGCTGGTTTATTCCACTCCAAATTGATCAAGCGTGCTCTGGTAGTGGCCCCAAAAACCTTGCTGCCTCACTGGATGAAAGAATTAGCTACCGTGGGACTTTCACAAATGACTAGGGAATACTACGGTACTTCTACGAAAGCCCGGGAATATGATCTCCACCACATTCTGCAGGGTAAAGGTATTCTTCTAACAACCTATGATATTGTGCGGAACAATACAAAGGCTTTGCAAGGTGACGACCATTATACTGATGAGGATGATGAAGATGGAAACAAATGGGACTACATGATTCTGGACGAGGGACATCTTATTAAGAACCCCAACACACAAAGGGCGAAGAGTTTGCTTGAGATCCCAAGTTCTCACCGTATTATAATAAGTGGTACACCAATCCAGAACAATCTCAAGGAACTGTGGGCTCTCTTCAACTTCAGCTGCCCTGGGTTACTCGGTGACAAGAATTGGTTTAAGCAGAATTATGAGCATTACATTCTTCGTGGAACTGACAAAAATGCTACTGATAGAGAACAGAGGATAGGCTCAACAGTAGCAAAGAACTTGAGGGAGCATATTCAACCTTTCTTCTTGCGGCGCCTTAAGAGTGAAGTCTTCGGTGATGATGGTGCAACCTCCAAACTTTCGAAGAAGGACGAAATTGTTGTATGGTTACGGTTAACAGCTTGCCAGAGGCAATTATATGAAGCTTTCTTAAACAGTGAAATTGTTCTGTCAGCTTTTGATGGTTCACCTCTAGCAGCTCTAACGATTCTGAAGAAAATATGTGACCACCCGCTTCTCTTAACTAAGAGGGCTGCTGAGGATGTCCTTGAAGGAATGGATTCAACATTAACACAAGAAGAAGCAGGCGTGGCTGAGAGATTGGCTATGCATATAGCGGACAATGTGGATACAGATGATTTTCAGACCAAGAATGACAGTATCTCTTGCAAATTGTCATTTATCATGTCGCTACTGGAAAATTTAATTCCAGAGGGGCACCGTGTTCTAATCTTCTCCCAGACACGCAAGATGCTTAATCTCATTCAGGATTCTCTTACCTCCAACGGTTATAGTTTCTTGCGAATTGATGGTACAACAAAAGCCCCTGACAGATTGAAGACTGTTGAAGAATTTCAAGAAGGTCATGTGGCTCCTATATTTCTCTTGACTTCTCAAGTTGGTGGTCTCGGCCTTACTCTGACTAAGGCAGACCGTGTGATTGTGGTGGACCCTGCCTGGAATCCAAGCACGGACAACCAGAGTGTTGATCGAGCATATAGAATTGGGCAGACAAAGGATGTCATCGTATATAGGTTAATGACCTCAGCAACTGTTGAAGAAAAGATATACAGAAAGCAGGTATACAAGGGAGGATTGTTTAAAACTGCAACTGAGCATAAAGAACAAATCCGCTACTTCAGCCAGCAGGACCTTCGAGAACTTTTTAGTCTTCCCAAGGGAGGCTTTGATGTTTCACCTACACAACAGCAACTATACGAAGAGCACTATAACCAAATCAAACTAGATGAAAAACTGGAATCCCATGTAAAGTTTCTCGAAACCCTTGGTATAGCTGGAGTTAGCCACCATAGCTTACTTTTCTCCAAGACAGCTCCTATTCAAGCGATACAGAAAGATGAAGAAGAACAAATAAGGAGAGAAACAGCATTGCTCTTGGGACGCGCATCAGCAAGTATTTCACAAGACACCGTCATCAATGGGGCTGACTATGCTTTCAAGCCAAAGGATGTGAATTTGGACAAGAGAATCAACATTTCCCCAGTCGATGACAAGGAATTGTCAGAAAGCGTAATTAAAGCAAGACTCAATCGTTTGACGATGCTATTACAAAACAAGGGTACGGTCTCAAGGCTACCTGATGGAGGGGCAAAAATCCAGAAGCAGATTGCTGAATTGACTCGAGAACTGAAAGACATGAAAGCAGCAGAAAGGATCAACATGCCTCAAGTTATTGACTTGGAGGAGGATATAAGTCGGAAGATGCAAAAAGGATTGAATCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000019 GO:0008150 GO:0009893 GO:0010035 GO:0010038 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0042221 GO:0045911 GO:0045935 GO:0045951 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

1090

Amino Acids

122.8

Weight (kDa)

5.99

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	377 - 547	1.4e-10	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	380 - 680	5.4e-66	SNF2-related domain
Helicase_C	PF00271	737 - 845	2e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003840)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63950 AT5G63950
fragaria_vesca	FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690
malus_domestica	MD15G1135400.v1.1 MD15G1135700.v1.1
prunus_persica	Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1
pyrus_communis	pycom01g00590 pycom15g12200 pycom15g12220
rosa_chinensis	RchiOBHm_Chr2g0122191
rosa_laevigata	RLG00000018669
rosa_multiflora	Rmu_co7987670.1_g000001 Rmu_co8056046.1_g000001 Rmu_sc0000805.1_g000001 Rmu_sc0003133.1_g000012 Rmu_sc0004574.1_g000007 Rmu_sc0013150.1_g000001 Rmu_sc0025362.1_g000002
rosa_roxburghii	Rroxscaffold_2G00121780
rosa_rugosa	Rorug02G0237100
rosa_samantha	Rh2AG295600 Rh2BG304600 Rh2CG282900 Rh2DG319500
rosa_wichuraiana	Rw2G023540 Rw2G023770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1020, 1622
AasI	GACNNNNNNGTC	2 cut(s)	136, 165
AatII	GACGTC	1 cut(s)	166
Acc36I	ACCTGC	1 cut(s)	2596
AccB1I	GGYRCC	2 cut(s)	1839, 2244
AccI	GTMKAC	2 cut(s)	843, 2610
AccII	CGCG	1 cut(s)	2931
AciI	CCGC	7 cut(s)	5, 983, 1456, 1837, 2039, 2144, 2659
AclWI	GGATC	5 cut(s)	81, 209, 597, 1594, 3209
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	7 cut(s)	287, 545, 704, 729, 2227, 2378, 3001
AcuI	CTGAAG	4 cut(s)	807, 1663, 2039, 2650
AcyI	GRCGYC	2 cut(s)	163, 1840
AfaI	GTAC	4 cut(s)	1375, 1633, 2341, 3109
AfeI	AGCGCT	1 cut(s)	271
AfiI	CCNNNNNNNGG	4 cut(s)	248, 835, 2708, 3131
AflII	CTTAAG	1 cut(s)	1844
AhlI	ACTAGT	1 cut(s)	695
AjnI	CCWGG	6 cut(s)	69, 534, 863, 1108, 1687, 2483
Alw21I	GWGCWC	2 cut(s)	1285, 2754
Alw26I	GTCTC	6 cut(s)	122, 248, 921, 965, 2438, 3118
AlwI	GGATC	5 cut(s)	81, 209, 597, 1594, 3209
AlwNI	CAGNNNCTG	1 cut(s)	2579
Ama87I	CYCGRG	2 cut(s)	1389, 3168
Aor51HI	AGCGCT	1 cut(s)	271
AoxI	GGCC	5 cut(s)	15, 177, 1084, 1293, 2437
ApeKI	GCWGC	6 cut(s)	914, 1309, 1683, 2003, 2060, 3191
ApoI	RAATTY	7 cut(s)	287, 545, 704, 729, 2227, 2378, 3001
ArsI	GACNNNNNNTTYG	2 cut(s)	153, 185
AseI	ATTAAT	1 cut(s)	999
Asp700I	GAANNNNTTC	4 cut(s)	287, 1971, 2086, 2379
AspLEI	GCGC	4 cut(s)	85, 272, 1842, 2933
AspS9I	GGNCC	3 cut(s)	1294, 2476, 2677
AsuC2I	CCSGG	4 cut(s)	683, 973, 1390, 1391
AsuHPI	GGTGA	9 cut(s)	369, 422, 597, 1493, 1604, 1712, 1874, 1986, 2715
AsuII	TTCGAA	2 cut(s)	734, 1889
AvaI	CYCGRG	2 cut(s)	1389, 3168
AvaII	GGWCC	2 cut(s)	2476, 2677
BaeGI	GKGCMC	1 cut(s)	2247
BaeI	ACNNNNGTAYC	2 cut(s)	46, 79
BanI	GGYRCC	2 cut(s)	1839, 2244
BanII	GRGCYC	1 cut(s)	1669
BbsI	GAAGAC	5 cut(s)	198, 863, 1849, 2372, 2690
Bbv12I	GWGCWC	2 cut(s)	1285, 2754
BbvCI	CCTCAGC	2 cut(s)	2064, 2572
BbvI	GCAGC	6 cut(s)	901, 1296, 1670, 2015, 2047, 3203
BccI	CCATC	8 cut(s)	197, 407, 686, 1508, 1862, 1982, 2330, 3122
BceAI	ACGGC	1 cut(s)	30
BcgI	CGANNNNNNTGC	6 cut(s)	823, 857, 1573, 1607, 2663, 2697
BciT130I	CCWGG	6 cut(s)	71, 536, 865, 1110, 1689, 2485
BciVI	GTATCC	3 cut(s)	74, 797, 2149
BclI	TGATCA	1 cut(s)	1272
BcnI	CCSGG	4 cut(s)	683, 973, 1390, 1391
BcoDI	GTCTC	6 cut(s)	122, 248, 921, 965, 2438, 3118
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	6 cut(s)	90, 263, 696, 1359, 2000, 2771
BfmI	CTRYAG	3 cut(s)	58, 1415, 3269
BfoI	RGCGCY	2 cut(s)	273, 1843
BfrI	CTTAAG	1 cut(s)	1844
BfuAI	ACCTGC	1 cut(s)	2596
BfuI	GTATCC	3 cut(s)	74, 797, 2149
BisI	GCNGC	8 cut(s)	915, 984, 1310, 1684, 1838, 2004, 2061, 3192
BlsI	GCNGC	8 cut(s)	916, 985, 1311, 1685, 1839, 2005, 2062, 3193
Bme18I	GGWCC	2 cut(s)	2476, 2677
BmeT110I	CYCGRG	2 cut(s)	1389, 3168
BmgT120I	GGNCC	3 cut(s)	1294, 2476, 2677
BmiI	GGNNCC	5 cut(s)	1296, 1841, 2246, 2400, 2478
BmrI	ACTGGG	2 cut(s)	236, 3023
BmsI	GCATC	6 cut(s)	505, 550, 2268, 2942, 3078, 3240
BmuI	ACTGGG	2 cut(s)	236, 3023
BpiI	GAAGAC	5 cut(s)	198, 863, 1849, 2372, 2690
BpmI	CTGGAG	2 cut(s)	53, 2844
Bpu10I	CCTNAGC	2 cut(s)	2064, 2572
Bpu14I	TTCGAA	2 cut(s)	734, 1889
BpuEI	CTTGAG	6 cut(s)	1616, 1637, 1828, 2406, 3100, 3198
BpuMI	CCSGG	4 cut(s)	683, 973, 1390, 1391
BsaHI	GRCGYC	2 cut(s)	163, 1840
BsaI	GGTCTC	2 cut(s)	2438, 3118
BsaJI	CCNNGG	9 cut(s)	35, 817, 1180, 1338, 1389, 1687, 1688, 2703, 2812
Bsc4I	CCNNNNNNNGG	4 cut(s)	248, 835, 2708, 3131
Bse1I	ACTGG	6 cut(s)	242, 1087, 1322, 2226, 2787, 3029
Bse3DI	GCAATG	4 cut(s)	511, 1103, 1169, 2915
BseBI	CCWGG	6 cut(s)	71, 536, 865, 1110, 1689, 2485
BseDI	CCNNGG	9 cut(s)	35, 817, 1180, 1338, 1389, 1687, 1688, 2703, 2812
BseLI	CCNNNNNNNGG	4 cut(s)	248, 835, 2708, 3131
BseMI	GCAATG	4 cut(s)	511, 1103, 1169, 2915
BseMII	CTCAG	6 cut(s)	315, 395, 2055, 2112, 2586, 2631
BseNI	ACTGG	6 cut(s)	242, 1087, 1322, 2226, 2787, 3029
BseRI	GAGGAG	1 cut(s)	3245
BseSI	GKGCMC	1 cut(s)	2247
BseXI	GCAGC	6 cut(s)	901, 1296, 1670, 2015, 2047, 3203
Bsh1236I	CGCG	1 cut(s)	2931
Bsh1285I	CGRYCG	1 cut(s)	52
BshFI	GGCC	5 cut(s)	17, 179, 1086, 1295, 2439
BshNI	GGYRCC	2 cut(s)	1839, 2244
BsiEI	CGRYCG	1 cut(s)	52
BsiHKAI	GWGCWC	2 cut(s)	1285, 2754
BsiHKCI	CYCGRG	2 cut(s)	1389, 3168
BsiSI	CCGG	3 cut(s)	682, 972, 1390
BslFI	GGGAC	5 cut(s)	481, 1356, 1541, 1563, 2940
BslI	CCNNNNNNNGG	4 cut(s)	248, 835, 2708, 3131
BsmAI	GTCTC	6 cut(s)	122, 248, 921, 965, 2438, 3118
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	5 cut(s)	481, 1356, 1541, 1563, 2940
BsnI	GGCC	5 cut(s)	17, 179, 1086, 1295, 2439
Bso31I	GGTCTC	2 cut(s)	2438, 3118
BsoBI	CYCGRG	2 cut(s)	1389, 3168
Bsp119I	TTCGAA	2 cut(s)	734, 1889
Bsp1286I	GDGCHC	4 cut(s)	1285, 1669, 2247, 2754
BspACI	CCGC	7 cut(s)	5, 983, 1456, 1837, 2039, 2144, 2659
BspANI	GGCC	5 cut(s)	17, 179, 1086, 1295, 2439
BspCNI	CTCAG	6 cut(s)	316, 394, 2056, 2113, 2585, 2632
BspFNI	CGCG	1 cut(s)	2931
BspLI	GGNNCC	5 cut(s)	1296, 1841, 2246, 2400, 2478
BspMAI	CTGCAG	1 cut(s)	1419
BspMI	ACCTGC	1 cut(s)	2596
BspPI	GGATC	5 cut(s)	81, 209, 597, 1594, 3209
BspQI	GCTCTTC	4 cut(s)	524, 681, 818, 2742
BspT104I	TTCGAA	2 cut(s)	734, 1889
BspT107I	GGYRCC	2 cut(s)	1839, 2244
BspTI	CTTAAG	1 cut(s)	1844
BspTNI	GGTCTC	2 cut(s)	2438, 3118
BsrDI	GCAATG	4 cut(s)	511, 1103, 1169, 2915
BsrI	ACTGG	6 cut(s)	242, 1087, 1322, 2226, 2787, 3029
BssECI	CCNNGG	9 cut(s)	35, 817, 1180, 1338, 1389, 1687, 1688, 2703, 2812
BssNAI	GTATAC	1 cut(s)	2611
BssNI	GRCGYC	2 cut(s)	163, 1840
BssT1I	CCWWGG	3 cut(s)	1180, 2703, 2812
Bst1107I	GTATAC	1 cut(s)	2611
Bst2UI	CCWGG	6 cut(s)	71, 536, 865, 1110, 1689, 2485
Bst6I	CTCTTC	8 cut(s)	109, 120, 524, 681, 818, 1580, 1676, 2742
BstACI	GRCGYC	2 cut(s)	163, 1840
BstAFI	CTTAAG	1 cut(s)	1844
BstBI	TTCGAA	2 cut(s)	734, 1889
BstDSI	CCRYGG	2 cut(s)	817, 1338
BstEII	GGTNACC	1 cut(s)	616
BstENI	CCTNNNNNAGG	1 cut(s)	3129
BstFNI	CGCG	1 cut(s)	2931
BstH2I	RGCGCY	2 cut(s)	273, 1843
BstHHI	GCGC	4 cut(s)	85, 272, 1842, 2933
BstMAI	GTCTC	6 cut(s)	122, 248, 921, 965, 2438, 3118
BstMCI	CGRYCG	1 cut(s)	52
BstMWI	GCNNNNNNNGC	4 cut(s)	2117, 2667, 2838, 2978
BstNI	CCWGG	6 cut(s)	71, 536, 865, 1110, 1689, 2485
BstNSI	RCATGY	2 cut(s)	522, 3211
BstPI	GGTNACC	1 cut(s)	616
BstSFI	CTRYAG	3 cut(s)	58, 1415, 3269
BstSLI	GKGCMC	1 cut(s)	2247
BstUI	CGCG	1 cut(s)	2931
BstV1I	GCAGC	6 cut(s)	901, 1296, 1670, 2015, 2047, 3203
BstV2I	GAAGAC	5 cut(s)	198, 863, 1849, 2372, 2690
BstX2I	RGATCY	3 cut(s)	73, 589, 1599
BstYI	RGATCY	3 cut(s)	73, 589, 1599
BstZ17I	GTATAC	1 cut(s)	2611
BsuI	GTATCC	3 cut(s)	74, 797, 2149
BsuRI	GGCC	5 cut(s)	17, 179, 1086, 1295, 2439
BtgI	CCRYGG	2 cut(s)	817, 1338
BtsIMutI	CAGTG	3 cut(s)	321, 1315, 1969
BveI	ACCTGC	1 cut(s)	2596
CaiI	CAGNNNCTG	1 cut(s)	2579
CfoI	GCGC	4 cut(s)	85, 272, 1842, 2933
Cfr13I	GGNCC	3 cut(s)	1294, 2476, 2677
Cfr9I	CCCGGG	1 cut(s)	1389
CseI	GACGC	1 cut(s)	2937
Csp6I	GTAC	4 cut(s)	1374, 1632, 2340, 3108
CviQI	GTAC	4 cut(s)	1374, 1632, 2340, 3108
DinI	GGCGCC	1 cut(s)	1841
DraI	TTTAAA	1 cut(s)	2629
DrdI	GACNNNNNNGTC	2 cut(s)	136, 165
DseDI	GACNNNNNNGTC	2 cut(s)	136, 165
EaeI	YGGCCR	1 cut(s)	15
Eam1104I	CTCTTC	8 cut(s)	109, 120, 524, 681, 818, 1580, 1676, 2742
EarI	CTCTTC	8 cut(s)	109, 120, 524, 681, 818, 1580, 1676, 2742
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	1180, 2703, 2812
Eco147I	AGGCCT	1 cut(s)	179
Eco24I	GRGCYC	1 cut(s)	1669
Eco31I	GGTCTC	2 cut(s)	2438, 3118
Eco47I	GGWCC	2 cut(s)	2476, 2677
Eco47III	AGCGCT	1 cut(s)	271
Eco57I	CTGAAG	4 cut(s)	807, 1663, 2039, 2650
Eco88I	CYCGRG	2 cut(s)	1389, 3168
Eco91I	GGTNACC	1 cut(s)	616
EcoNI	CCTNNNNNAGG	1 cut(s)	3129
EcoO109I	RGGNCCY	1 cut(s)	2677
EcoO65I	GGTNACC	1 cut(s)	616
EcoRII	CCWGG	6 cut(s)	69, 534, 863, 1108, 1687, 2483
EcoT14I	CCWWGG	3 cut(s)	1180, 2703, 2812
EcoT22I	ATGCAT	2 cut(s)	520, 2139
EcoT38I	GRGCYC	1 cut(s)	1669
EgeI	GGCGCC	1 cut(s)	1841
EheI	GGCGCC	1 cut(s)	1841
ErhI	CCWWGG	3 cut(s)	1180, 2703, 2812
Esp3I	CGTCTC	1 cut(s)	122
FalI	AAGNNNNNCTT	4 cut(s)	1416, 1448, 2696, 2728
FaqI	GGGAC	5 cut(s)	481, 1356, 1541, 1563, 2940
FauI	CCCGC	1 cut(s)	2046
FbaI	TGATCA	1 cut(s)	1272
FblI	GTMKAC	2 cut(s)	843, 2610
Fnu4HI	GCNGC	8 cut(s)	915, 984, 1310, 1684, 1838, 2004, 2061, 3192
FriOI	GRGCYC	1 cut(s)	1669
Fsp4HI	GCNGC	8 cut(s)	915, 984, 1310, 1684, 1838, 2004, 2061, 3192
FspBI	CTAG	6 cut(s)	90, 263, 696, 1359, 2000, 2771
GlaI	GCGC	4 cut(s)	84, 271, 1841, 2932
GluI	GCNGC	8 cut(s)	915, 984, 1310, 1684, 1838, 2004, 2061, 3192
GsuI	CTGGAG	2 cut(s)	53, 2844
HaeII	RGCGCY	2 cut(s)	273, 1843
HaeIII	GGCC	5 cut(s)	17, 179, 1086, 1295, 2439
HapII	CCGG	3 cut(s)	682, 972, 1390
HgaI	GACGC	1 cut(s)	2937
HhaI	GCGC	4 cut(s)	85, 272, 1842, 2933
Hin1I	GRCGYC	2 cut(s)	163, 1840
Hin6I	GCGC	4 cut(s)	83, 270, 1840, 2931
HinP1I	GCGC	4 cut(s)	83, 270, 1840, 2931
HincII	GTYRAC	2 cut(s)	844, 1923
HindII	GTYRAC	2 cut(s)	844, 1923
HindIII	AAGCTT	3 cut(s)	149, 461, 1950
HpaI	GTTAAC	1 cut(s)	1923
HpaII	CCGG	3 cut(s)	682, 972, 1390
HphI	GGTGA	9 cut(s)	369, 422, 597, 1493, 1604, 1712, 1874, 1986, 2715
Hpy166II	GTNNAC	6 cut(s)	844, 1634, 1923, 1994, 2476, 2611
Hpy8I	GTNNAC	6 cut(s)	844, 1634, 1923, 1994, 2476, 2611
Hpy99I	CGWCG	2 cut(s)	165, 168
HpyAV	CCTTC	9 cut(s)	414, 484, 897, 1058, 1142, 1888, 2072, 2381, 2690
HpyCH4IV	ACGT	1 cut(s)	163
HpyF10VI	GCNNNNNNNGC	4 cut(s)	2117, 2667, 2838, 2978
HpySE526I	ACGT	1 cut(s)	163
Hsp92I	GRCGYC	2 cut(s)	163, 1840
HspAI	GCGC	4 cut(s)	83, 270, 1840, 2931
KasI	GGCGCC	1 cut(s)	1839
Ksp22I	TGATCA	1 cut(s)	1272
KspAI	GTTAAC	1 cut(s)	1923
LguI	GCTCTTC	4 cut(s)	524, 681, 818, 2742
LmnI	GCTCC	4 cut(s)	39, 1813, 2404, 2866
Lsp1109I	GCAGC	6 cut(s)	901, 1296, 1670, 2015, 2047, 3203
LweI	GCATC	6 cut(s)	505, 550, 2268, 2942, 3078, 3240
MaeI	CTAG	6 cut(s)	90, 263, 696, 1359, 2000, 2771
MaeII	ACGT	1 cut(s)	163
MaeIII	GTNAC	7 cut(s)	53, 616, 1481, 1692, 1700, 1914, 2030
MflI	RGATCY	3 cut(s)	73, 589, 1599
MhlI	GDGCHC	4 cut(s)	1285, 1669, 2247, 2754
Mly113I	GGCGCC	1 cut(s)	1840
MlyI	GAGTC	2 cut(s)	3066, 3160
MmeI	TCCRAC	5 cut(s)	721, 880, 1035, 2334, 3224
Mph1103I	ATGCAT	2 cut(s)	520, 2139
MroXI	GAANNNNTTC	4 cut(s)	287, 1971, 2086, 2379
MslI	CAYNNNNRTG	1 cut(s)	1038
MspA1I	CMGCKG	1 cut(s)	1683
MspCI	CTTAAG	1 cut(s)	1844
MspI	CCGG	3 cut(s)	682, 972, 1390
MvaI	CCWGG	6 cut(s)	71, 536, 865, 1110, 1689, 2485
MvnI	CGCG	1 cut(s)	2931
MwoI	GCNNNNNNNGC	4 cut(s)	2117, 2667, 2838, 2978
NarI	GGCGCC	1 cut(s)	1840
NciI	CCSGG	4 cut(s)	683, 973, 1390, 1391
NlaIV	GGNNCC	5 cut(s)	1296, 1841, 2246, 2400, 2478
NmeAIII	GCCGAG	1 cut(s)	2415
NmuCI	GTSAC	4 cut(s)	53, 1481, 1700, 2030
NsiI	ATGCAT	2 cut(s)	520, 2139
NspI	RCATGY	2 cut(s)	522, 3211
NspV	TTCGAA	2 cut(s)	734, 1889
PaeR7I	CTCGAG	1 cut(s)	3168
PasI	CCCWGGG	1 cut(s)	1688
PceI	AGGCCT	1 cut(s)	179
PciSI	GCTCTTC	4 cut(s)	524, 681, 818, 2742
PdmI	GAANNNNTTC	4 cut(s)	287, 1971, 2086, 2379
PflFI	GACNNNGTC	4 cut(s)	162, 165, 472, 2957
PfoI	TCCNGGA	3 cut(s)	69, 681, 971
PkrI	GCNGC	8 cut(s)	916, 985, 1311, 1685, 1839, 2005, 2062, 3193
Ple19I	CGATCG	1 cut(s)	52
PleI	GAGTC	2 cut(s)	3066, 3160
PluTI	GGCGCC	1 cut(s)	1843
PpsI	GAGTC	2 cut(s)	3066, 3160
PpuMI	RGGWCCY	1 cut(s)	2677
PshBI	ATTAAT	1 cut(s)	999
PsiI	TTATAA	2 cut(s)	1020, 1622
Psp5II	RGGWCCY	1 cut(s)	2677
Psp6I	CCWGG	6 cut(s)	69, 534, 863, 1108, 1687, 2483
PspEI	GGTNACC	1 cut(s)	616
PspGI	CCWGG	6 cut(s)	69, 534, 863, 1108, 1687, 2483
PspN4I	GGNNCC	5 cut(s)	1296, 1841, 2246, 2400, 2478
PspPI	GGNCC	3 cut(s)	1294, 2476, 2677
PspPPI	RGGWCCY	1 cut(s)	2677
PstI	CTGCAG	1 cut(s)	1419
PstNI	CAGNNNCTG	1 cut(s)	2579
PsuI	RGATCY	3 cut(s)	73, 589, 1599
PsyI	GACNNNGTC	4 cut(s)	162, 165, 472, 2957
PvuI	CGATCG	1 cut(s)	52
PvuII	CAGCTG	1 cut(s)	1683
RsaI	GTAC	4 cut(s)	1375, 1633, 2341, 3109
RsaNI	GTAC	4 cut(s)	1374, 1632, 2340, 3108
RseI	CAYNNNNRTG	1 cut(s)	1038
SalI	GTCGAC	1 cut(s)	842
SapI	GCTCTTC	4 cut(s)	524, 681, 818, 2742
SatI	GCNGC	8 cut(s)	915, 984, 1310, 1684, 1838, 2004, 2061, 3192
Sau96I	GGNCC	3 cut(s)	1294, 2476, 2677
SchI	GAGTC	2 cut(s)	3066, 3160
SduI	GDGCHC	4 cut(s)	1285, 1669, 2247, 2754
SfaNI	GCATC	6 cut(s)	505, 550, 2268, 2942, 3078, 3240
SfcI	CTRYAG	3 cut(s)	58, 1415, 3269
SfoI	GGCGCC	1 cut(s)	1841
Sfr274I	CTCGAG	1 cut(s)	3168
SfuI	TTCGAA	2 cut(s)	734, 1889
SinI	GGWCC	2 cut(s)	2476, 2677
SlaI	CTCGAG	1 cut(s)	3168
SmaI	CCCGGG	1 cut(s)	1391
SmiMI	CAYNNNNRTG	1 cut(s)	1038
SmlI	CTYRAG	8 cut(s)	1595, 1652, 1807, 1844, 2421, 3115, 3168, 3213
SmoI	CTYRAG	8 cut(s)	1595, 1652, 1807, 1844, 2421, 3115, 3168, 3213
SpeI	ACTAGT	1 cut(s)	695
SseBI	AGGCCT	1 cut(s)	179
SsiI	CCGC	7 cut(s)	5, 983, 1456, 1837, 2039, 2144, 2659
SspDI	GGCGCC	1 cut(s)	1839
SspMI	CTAG	6 cut(s)	90, 263, 696, 1359, 2000, 2771
StuI	AGGCCT	1 cut(s)	179
StyI	CCWWGG	3 cut(s)	1180, 2703, 2812
TaiI	ACGT	1 cut(s)	166
TaqII	GACCGA	1 cut(s)	1002
TauI	GCSGC	2 cut(s)	986, 1840
TscAI	CASTG	3 cut(s)	328, 1322, 1969
TseFI	GTSAC	4 cut(s)	53, 1481, 1700, 2030
TseI	GCWGC	6 cut(s)	914, 1309, 1683, 2003, 2060, 3191
Tsp45I	GTSAC	4 cut(s)	53, 1481, 1700, 2030
TspGWI	ACGGA	1 cut(s)	2513
TspMI	CCCGGG	1 cut(s)	1389
TspRI	CASTG	3 cut(s)	328, 1322, 1969
Tth111I	GACNNNGTC	4 cut(s)	162, 165, 472, 2957
Vha464I	CTTAAG	1 cut(s)	1844
VpaK11BI	GGWCC	2 cut(s)	2476, 2677
VspI	ATTAAT	1 cut(s)	999
XagI	CCTNNNNNAGG	1 cut(s)	3129
XapI	RAATTY	7 cut(s)	287, 545, 704, 729, 2227, 2378, 3001
XceI	RCATGY	2 cut(s)	522, 3211
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1187
XhoI	CTCGAG	1 cut(s)	3168
XmaI	CCCGGG	1 cut(s)	1389
XmiI	GTMKAC	2 cut(s)	843, 2610
XmnI	GAANNNNTTC	4 cut(s)	287, 1971, 2086, 2379
XspI	CTAG	6 cut(s)	90, 263, 696, 1359, 2000, 2771
ZraI	GACGTC	1 cut(s)	164
Zsp2I	ATGCAT	2 cut(s)	520, 2139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.