RLG00000018669

DNA excision repair protein ERCC-6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0003840
Physical Location & Seq
Forward (+)
33584022 .. 33593177
9156 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018669

Sequence Viewer

Length: 2913 bp
ATGGCGGAGAGAAAGAGCAGTAAGAAGCCTCAAAGCCTCAACGACAGTCACTATCGCCTCCTCCAAGACCTCAGTTCTGCTCCTCCCAAGCCCTCCGAGCAAGGAAAGGCGACTAAGGTGAGGATTGAAGGCGCGCGCCGTCTCTGTAAGATTCGAGTGGCTTCGGATGATGACGATGATCGTGGTGAGGGATTTAATGATGACGACGCGCCCAGTTTCTCCGGGATTGCTGATTTTGAGTCGCCGCCGCAGCCGCAGAGGAGTGAGGTTGGAAATGGCGGTGGAAATGAGATTAGGGGAATTTTAGATGACTTGAGCTCCAGGCTTGAGTTTTTGTCAATCGAGAGGAAGGGAGCCAGAAAATCTAATAAGGTTGAAGATTCGGGGATTTCGAAGGAAGTTGATGGTGTAAAGAAAGAGAAAGTTGAGTATAAGAATGCGGCGCCTTCGTTTTCGATTGCTTCTGACTTGTCTGATTCCTCTAATGAGACCACTAAGACTGGTGGAAAGGGAGTTGAGAGTGTGGTGGATAAATATGAGAAGAAAAGTGATTTTCAATGCAAGTTCGAAGAGGCTGATGATGACAGAGATTGTGTGGTTGTGAGGACTAAGAAGACAGATAAACAAGTGGGGAGGCGGGGTGGTGGTAGCTATAAAGAGTACTACGATTGTGATGAGGATAGTGAGGTTGATGATTCTAGGGATAATTCTGTTCCAGAGGATGATGGTTCTATCACTCTGAGTGGTCTCACATATACTTACAAATTACCTGGGAAGATTGCAAAGATGTTGTTTCCGCATCAGCGCGAAGGCTTGAAGTGGCTATGGGCTCTGCATTGCCAGGGTAAGGGAGGAATCTTAGGAGATGACATGGGCTTGGGTAAAACAATGCAGATTTGTGGCTATTTAGCTGGATTATTTCATTCACGCTTGATTAAAAGGGTAATGGTTGTGGCTCCTAAAACACTACTTTCTCATTGGATAAAAGAATTATCAGCTGTGGGTCTCTCAGACAAGATAAGAGAATACTATGGGACATGTACAAAAGCTCGGAAGTATGAGCTTCAGTATGTACTTCAGGACAAAGGCATTCTTCTGACAACTTATGATATTGTGCGAGTCAACTCAAAATCTCTAAAAGGGAGTGACTATATTCTCGATGATGGAAGTGAGGATATGATATGGGATTATATGATACTTGATGAGGGTCATCTCATAAAGAATCCCAGTACACAAAGAGCCAAAAGTTTGCTAGATATACCCTGTTCACATCGCATTATAGTAAGTGGCACGCCATTGCAAAACAATCTGAAGGAGTTGTGGGCCTTATTTAACTTCTGTTGCCCTGAGCTACTGGGTGATAAGAACTGGTTCAAGGAAAGATTCGAGTCACGCATTTGTCGTGGAAATGAGAAAAATGCTTCAGATAGGGAGAAGCGTATTGGTTCCACGGTAGCACAGGAGCTTAGAGACCGTATTCAACCTTTTTTCCTGCGTCGCCTGAAGAATGAGGTGTTTAAGGAGGATAATGACCAAACAAATGCGACACTTTCTAAAAAGAATGAGATCATTGTTTGGCTAAGATTAACCAGCTGTCAGCGGAAACTTTATGAAGCATATTTAAAGAGTGAGCTGGTTCTTTCTGCTTTTGATGGGTCACCATTGGCTGCACTTACGATTCTGAAGAAAATATGTGATCATCCACTTCTATTGACAAAGCGAGCTGCTGAAGATGTACTAGAAGAGTTGGATTCATTGCTTAAGCCAGATGATGCTTGTATGGCAGAAAAACTAGCAATGCATATAGCAGATGTTGCTGAGAAAGAGGAGTTTGATGAGAACCATGCAAATCTCTCTTGCAAAATATCTTTTATAATGTCATTGTTGGATAACTTGATTCCTGAGGGGCATAATGTTCTCATCTTTTCCCAAACTAGAAAGATGCTTAATCTTATTCAGGAAACACTAATATCCAGCGGTTACAAGTTCCAACGCATTGATGGTACCACAAAAGCTACTGAAAGAATTAGGATTGTTAATGATTTCCAAGAAGGTATTGGGGCTCCCATATTTCTCTTGACTTCTCAAGTTGGTGGTTTGGGTCTTACACTTACAAGAGCTGATCGTGTGATAGTGGTTGATCCTGCTTGGAACCCGAGTACTGATAGCCAGAGTGTGGATCGTGCATATCGAATTGGGCAGAATAAGGATGTCATTGTATATAGATTAATGACTTGTGCGACTGTTGAAGAAAAGATATACAGAAAACAGATTTACAAAGGGGGGTTGTTTAGAACTGCAACTGAGCAAAAAGAGCAGATTCGGTACTTTAGTCAACAGGATCTTCGTGAACTTTTCAGTCTCCCACAACAAGGTTTTGATGTTTCCGTTACTCAGAAGCAGCTAAATGAGGAGCATGATCAACAGCACACAATGGAAGAGTCTTTACAAGCCCATTTAGAATTCTTGGAAACTCAAGGGATAGCTGGTGTCAGTAACCACAGTTTACTCTTCTCCAAGACAGCACCACCTCTGCCAGAGGTAGACGCGGAGCAGGAGGACGTTGAAAGGATTAGACGAACTTTACTTGCGAGAAGCTCAACTTCAAGTTCGGCACCCGAATGTAATGTCAATGGGGCTGAATATGCTTTCAAGCCTAAGGATGTAATATTAAATAAGAAGATGCCTTCTTCACCAGCTGATGCAGGAAAAATGACAAAATCAGAGATTAAAGAGAACATCACTAGGCTGTCACAAACTCTTGCAAATAAGGCTTTAGTTTCAAGATTACCTGATAAGGGACAGAAAATACAGAGGCAAATTTCTGAATTGAATGCAGAGCTTCGTAGACTAGAGAAGGACGTAATTGACTTGGATGATGTGACTGAGGAGCTTAAAGGAGTGGTGATATAA

Protein Analysis

971

Amino Acids

109.23

Weight (kDa)

5.89

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 264 - 432 8.1e-07 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 267 - 568 6.8e-62 SNF2-related domain
AAA_34 PF13872 283 - 413 7e-07 P-loop containing NTP hydrolase pore-1
HDA2-3 PF11496 609 - 751 1.3e-06 Class II histone deacetylase complex subunits 2 and 3
Helicase_C PF00271 624 - 733 4.8e-22 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1874
Acc65I GGTACC 1 cut(s) 2003
AccB1I GGYRCC 3 cut(s) 442, 2003, 2614
AccB7I CCANNNNNTGG 1 cut(s) 2176
AccI GTMKAC 2 cut(s) 2544, 2848
AccII CGCG 5 cut(s) 134, 136, 209, 807, 2549
AclWI GGATC 3 cut(s) 2135, 2187, 2349
AcsI RAATTY 3 cut(s) 300, 2462, 2820
AcuI CTGAAG 7 cut(s) 1049, 1061, 1331, 1407, 1523, 1703, 1749
AcyI GRCGYC 1 cut(s) 443
AfaI GTAC 8 cut(s) 662, 1042, 1074, 1231, 1737, 2005, 2161, 2327
AfiI CCNNNNNNNGG 4 cut(s) 847, 2176, 2372, 2798
AflII CTTAAG 1 cut(s) 1760
AflIII ACRYGT 1 cut(s) 1037
AjnI CCWGG 3 cut(s) 320, 769, 840
Alw21I GWGCWC 1 cut(s) 320
Alw26I GTCTC 6 cut(s) 146, 482, 752, 1010, 1464, 2366
AlwI GGATC 3 cut(s) 2135, 2187, 2349
Ama87I CYCGRG 1 cut(s) 2155
AoxI GGCC 1 cut(s) 1323
ApeKI GCWGC 4 cut(s) 250, 1667, 1724, 2401
ApoI RAATTY 3 cut(s) 300, 2462, 2820
ArsI GACNNNNNNTTYG 2 cut(s) 2613, 2645
AseI ATTAAT 1 cut(s) 2228
Asp700I GAANNNNTTC 1 cut(s) 1370
Asp718I GGTACC 1 cut(s) 2003
AspLEI GCGC 6 cut(s) 134, 136, 138, 211, 445, 807
AspS9I GGNCC 1 cut(s) 1323
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 5 cut(s) 130, 197, 1370, 1650, 2685
AsuII TTCGAA 2 cut(s) 392, 567
AvaI CYCGRG 1 cut(s) 2155
AxyI CCTNAGG 2 cut(s) 1902, 2658
BaeI ACNNNNGTAYC 2 cut(s) 2317, 2350
BanI GGYRCC 3 cut(s) 442, 2003, 2614
BanII GRGCYC 3 cut(s) 320, 832, 2065
BarI GAAGNNNNNNTAC 2 cut(s) 2430, 2462
BbsI GAAGAC 1 cut(s) 620
Bbv12I GWGCWC 1 cut(s) 320
BbvI GCAGC 4 cut(s) 262, 1654, 1711, 2413
BccI CCATC 5 cut(s) 398, 719, 1157, 1646, 1994
BceAI ACGGC 1 cut(s) 123
BciT130I CCWGG 3 cut(s) 322, 771, 842
BclI TGATCA 2 cut(s) 1696, 2419
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 6 cut(s) 146, 482, 752, 1010, 1464, 2366
BfaI CTAG 7 cut(s) 699, 1253, 1739, 1793, 1935, 2745, 2852
BfoI RGCGCY 1 cut(s) 446
BfrI CTTAAG 1 cut(s) 1760
BisI GCNGC 8 cut(s) 245, 248, 251, 254, 441, 1668, 1725, 2402
BlsI GCNGC 8 cut(s) 246, 249, 252, 255, 442, 1669, 1726, 2403
BmcAI AGTACT 2 cut(s) 662, 2161
Bme1390I CCNGG 4 cut(s) 223, 322, 771, 842
BmeT110I CYCGRG 1 cut(s) 2155
BmgT120I GGNCC 1 cut(s) 1323
BmiI GGNNCC 8 cut(s) 355, 444, 957, 1447, 2005, 2064, 2153, 2616
BmrFI CCNGG 4 cut(s) 223, 322, 771, 842
BmrI ACTGGG 3 cut(s) 207, 1221, 1364
BmsI GCATC 5 cut(s) 808, 1762, 1932, 2673, 2692
BmuI ACTGGG 3 cut(s) 207, 1221, 1364
BpiI GAAGAC 1 cut(s) 620
BpmI CTGGAG 1 cut(s) 304
Bpu10I CCTNAGC 1 cut(s) 1347
Bpu14I TTCGAA 2 cut(s) 392, 567
BpuEI CTTGAG 4 cut(s) 334, 347, 2070, 2460
BpuMI CCSGG 1 cut(s) 223
BsaHI GRCGYC 1 cut(s) 443
BsaI GGTCTC 4 cut(s) 482, 752, 1010, 1464
BsaJI CCNNGG 3 cut(s) 770, 841, 1449
BsaXI ACNNNNNCTCC 4 cut(s) 302, 332, 625, 655
Bsc4I CCNNNNNNNGG 4 cut(s) 847, 2176, 2372, 2798
Bse1I ACTGG 5 cut(s) 213, 505, 1227, 1359, 1373
Bse21I CCTNAGG 2 cut(s) 1902, 2658
Bse3DI GCAATG 4 cut(s) 835, 1295, 1754, 1803
BseBI CCWGG 3 cut(s) 322, 771, 842
BseDI CCNNGG 3 cut(s) 770, 841, 1449
BseGI GGATG 6 cut(s) 172, 727, 1699, 2215, 2668, 2881
BseLI CCNNNNNNNGG 4 cut(s) 847, 2176, 2372, 2798
BseMI GCAATG 4 cut(s) 835, 1295, 1754, 1803
BseMII CTCAG 9 cut(s) 85, 731, 1023, 1338, 1809, 1893, 2295, 2408, 2877
BseNI ACTGG 5 cut(s) 213, 505, 1227, 1359, 1373
BsePI GCGCGC 2 cut(s) 132, 134
BseRI GAGGAG 6 cut(s) 50, 72, 274, 1841, 2426, 2903
BseXI GCAGC 4 cut(s) 262, 1654, 1711, 2413
BsgI GTGCAG 1 cut(s) 1653
Bsh1236I CGCG 5 cut(s) 134, 136, 209, 807, 2549
BshFI GGCC 1 cut(s) 1325
BshNI GGYRCC 3 cut(s) 442, 2003, 2614
BsiHKAI GWGCWC 1 cut(s) 320
BsiHKCI CYCGRG 1 cut(s) 2155
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 2 cut(s) 1048, 2814
BslI CCNNNNNNNGG 4 cut(s) 847, 2176, 2372, 2798
BsmAI GTCTC 6 cut(s) 146, 482, 752, 1010, 1464, 2366
BsmBI CGTCTC 1 cut(s) 146
BsmFI GGGAC 2 cut(s) 1048, 2814
BsmI GAATGC 3 cut(s) 442, 1089, 2839
BsnI GGCC 1 cut(s) 1325
Bso31I GGTCTC 4 cut(s) 482, 752, 1010, 1464
BsoBI CYCGRG 1 cut(s) 2155
Bsp119I TTCGAA 2 cut(s) 392, 567
Bsp1286I GDGCHC 3 cut(s) 320, 832, 2065
Bsp1407I TGTACA 1 cut(s) 1040
Bsp143I GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
BspANI GGCC 1 cut(s) 1325
BspCNI CTCAG 9 cut(s) 84, 732, 1022, 1339, 1810, 1894, 2296, 2407, 2878
BspFNI CGCG 5 cut(s) 134, 136, 209, 807, 2549
BspLI GGNNCC 8 cut(s) 355, 444, 957, 1447, 2005, 2064, 2153, 2616
BspPI GGATC 3 cut(s) 2135, 2187, 2349
BspT104I TTCGAA 2 cut(s) 392, 567
BspT107I GGYRCC 3 cut(s) 442, 2003, 2614
BspTI CTTAAG 1 cut(s) 1760
BspTNI GGTCTC 4 cut(s) 482, 752, 1010, 1464
BsrDI GCAATG 4 cut(s) 835, 1295, 1754, 1803
BsrGI TGTACA 1 cut(s) 1040
BsrI ACTGG 5 cut(s) 213, 505, 1227, 1359, 1373
BssECI CCNNGG 3 cut(s) 770, 841, 1449
BssHII GCGCGC 2 cut(s) 132, 134
BssMI GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
BssNI GRCGYC 1 cut(s) 443
Bst2UI CCWGG 3 cut(s) 322, 771, 842
Bst4CI ACNGT 5 cut(s) 47, 1453, 1475, 2245, 2504
Bst6I CTCTTC 4 cut(s) 564, 1737, 2433, 2516
BstACI GRCGYC 1 cut(s) 443
BstAFI CTTAAG 1 cut(s) 1760
BstAPI GCANNNNNTGC 1 cut(s) 1814
BstAUI TGTACA 1 cut(s) 1040
BstBI TTCGAA 2 cut(s) 392, 567
BstC8I GCNNGC 4 cut(s) 134, 136, 1292, 1722
BstDSI CCRYGG 1 cut(s) 1449
BstEII GGTNACC 1 cut(s) 1656
BstF5I GGATG 6 cut(s) 172, 727, 1699, 2215, 2668, 2881
BstFNI CGCG 5 cut(s) 134, 136, 209, 807, 2549
BstH2I RGCGCY 1 cut(s) 446
BstHHI GCGC 6 cut(s) 134, 136, 138, 211, 445, 807
BstKTI GATC 8 cut(s) 181, 1569, 1699, 2125, 2143, 2182, 2344, 2422
BstMAI GTCTC 6 cut(s) 146, 482, 752, 1010, 1464, 2366
BstMBI GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
BstMWI GCNNNNNNNGC 8 cut(s) 97, 250, 253, 1781, 1814, 2314, 2645, 2771
BstNI CCWGG 3 cut(s) 322, 771, 842
BstNSI RCATGY 1 cut(s) 1041
BstPI GGTNACC 1 cut(s) 1656
BstSCI CCNGG 4 cut(s) 221, 320, 769, 840
BstUI CGCG 5 cut(s) 134, 136, 209, 807, 2549
BstV1I GCAGC 4 cut(s) 262, 1654, 1711, 2413
BstV2I GAAGAC 1 cut(s) 620
BstX2I RGATCY 1 cut(s) 2341
BstYI RGATCY 1 cut(s) 2341
Bsu36I CCTNAGG 2 cut(s) 1902, 2658
BsuRI GGCC 1 cut(s) 1325
BtgI CCRYGG 1 cut(s) 1449
BtgZI GCGATG 1 cut(s) 1256
BtsCI GGATG 6 cut(s) 172, 727, 1699, 2215, 2668, 2881
Cac8I GCNNGC 4 cut(s) 134, 136, 1292, 1722
CfoI GCGC 6 cut(s) 134, 136, 138, 211, 445, 807
Cfr13I GGNCC 1 cut(s) 1323
CseI GACGC 3 cut(s) 215, 1484, 2555
Csp6I GTAC 8 cut(s) 661, 1041, 1073, 1230, 1736, 2004, 2160, 2326
CspCI CAANNNNNGTGG 2 cut(s) 1692, 1727
CviAII CATG 4 cut(s) 871, 1038, 1844, 2417
CviQI GTAC 8 cut(s) 661, 1041, 1073, 1230, 1736, 2004, 2160, 2326
DinI GGCGCC 1 cut(s) 444
DpnI GATC 8 cut(s) 180, 1568, 1698, 2124, 2142, 2181, 2343, 2421
DpnII GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
DraI TTTAAA 1 cut(s) 1623
Eam1104I CTCTTC 4 cut(s) 564, 1737, 2433, 2516
EarI CTCTTC 4 cut(s) 564, 1737, 2433, 2516
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 318
Eco24I GRGCYC 3 cut(s) 320, 832, 2065
Eco31I GGTCTC 4 cut(s) 482, 752, 1010, 1464
Eco53kI GAGCTC 1 cut(s) 318
Eco57I CTGAAG 7 cut(s) 1049, 1061, 1331, 1407, 1523, 1703, 1749
Eco81I CCTNAGG 2 cut(s) 1902, 2658
Eco88I CYCGRG 1 cut(s) 2155
Eco91I GGTNACC 1 cut(s) 1656
EcoICRI GAGCTC 1 cut(s) 318
EcoO65I GGTNACC 1 cut(s) 1656
EcoRI GAATTC 1 cut(s) 2462
EcoRII CCWGG 3 cut(s) 320, 769, 840
EcoT22I ATGCAT 1 cut(s) 1803
EcoT38I GRGCYC 3 cut(s) 320, 832, 2065
EgeI GGCGCC 1 cut(s) 444
EheI GGCGCC 1 cut(s) 444
Esp3I CGTCTC 1 cut(s) 146
FaeI CATG 4 cut(s) 874, 1041, 1847, 2420
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 2587, 2619
FaqI GGGAC 2 cut(s) 1048, 2814
FatI CATG 4 cut(s) 870, 1037, 1843, 2416
FauI CCCGC 1 cut(s) 630
FbaI TGATCA 2 cut(s) 1696, 2419
FblI GTMKAC 2 cut(s) 2544, 2848
Fnu4HI GCNGC 8 cut(s) 245, 248, 251, 254, 441, 1668, 1725, 2402
FokI GGATG 6 cut(s) 179, 734, 1686, 2222, 2675, 2888
FriOI GRGCYC 3 cut(s) 320, 832, 2065
Fsp4HI GCNGC 8 cut(s) 245, 248, 251, 254, 441, 1668, 1725, 2402
FspBI CTAG 7 cut(s) 699, 1253, 1739, 1793, 1935, 2745, 2852
GlaI GCGC 6 cut(s) 133, 135, 137, 210, 444, 806
GluI GCNGC 8 cut(s) 245, 248, 251, 254, 441, 1668, 1725, 2402
GsuI CTGGAG 1 cut(s) 304
HaeII RGCGCY 1 cut(s) 446
HaeIII GGCC 1 cut(s) 1325
HapII CCGG 1 cut(s) 222
HgaI GACGC 3 cut(s) 215, 1484, 2555
HhaI GCGC 6 cut(s) 134, 136, 138, 211, 445, 807
Hin1I GRCGYC 1 cut(s) 443
Hin1II CATG 4 cut(s) 874, 1041, 1847, 2420
Hin6I GCGC 6 cut(s) 132, 134, 136, 209, 443, 805
HinP1I GCGC 6 cut(s) 132, 134, 136, 209, 443, 805
HincII GTYRAC 2 cut(s) 1123, 2336
HindII GTYRAC 2 cut(s) 1123, 2336
HpaII CCGG 1 cut(s) 222
HphI GGTGA 5 cut(s) 130, 197, 1370, 1650, 2685
Hpy166II GTNNAC 8 cut(s) 1123, 1232, 1268, 2336, 2351, 2507, 2545, 2849
Hpy188III TCNNGA 9 cut(s) 343, 716, 1079, 1157, 1901, 1958, 2077, 2348, 2784
Hpy8I GTNNAC 8 cut(s) 1123, 1232, 1268, 2336, 2351, 2507, 2545, 2849
Hpy99I CGWCG 2 cut(s) 209, 1500
HpyAV CCTTC 9 cut(s) 122, 343, 388, 456, 803, 1306, 2045, 2697, 2851
HpyCH4III ACNGT 5 cut(s) 47, 1453, 1475, 2245, 2504
HpyCH4IV ACGT 2 cut(s) 2562, 2862
HpyF10VI GCNNNNNNNGC 8 cut(s) 97, 250, 253, 1781, 1814, 2314, 2645, 2771
HpySE526I ACGT 2 cut(s) 2562, 2862
Hsp92I GRCGYC 1 cut(s) 443
Hsp92II CATG 4 cut(s) 874, 1041, 1847, 2420
HspAI GCGC 6 cut(s) 132, 134, 136, 209, 443, 805
KasI GGCGCC 1 cut(s) 442
KpnI GGTACC 1 cut(s) 2007
Ksp22I TGATCA 2 cut(s) 1696, 2419
Kzo9I GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
LmnI GCTCC 9 cut(s) 85, 323, 353, 961, 1462, 2068, 2413, 2551, 2890
Lsp1109I GCAGC 4 cut(s) 262, 1654, 1711, 2413
LweI GCATC 5 cut(s) 808, 1762, 1932, 2673, 2692
MaeI CTAG 7 cut(s) 699, 1253, 1739, 1793, 1935, 2745, 2852
MaeII ACGT 2 cut(s) 2562, 2862
MaeIII GTNAC 9 cut(s) 47, 1145, 1389, 1656, 1979, 2389, 2495, 2751, 2881
MalI GATC 8 cut(s) 180, 1568, 1698, 2124, 2142, 2181, 2343, 2421
MboI GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
MflI RGATCY 1 cut(s) 2341
MhlI GDGCHC 3 cut(s) 320, 832, 2065
Mly113I GGCGCC 1 cut(s) 443
MlyI GAGTC 4 cut(s) 248, 1128, 1397, 2450
MmeI TCCRAC 4 cut(s) 250, 1728, 1866, 2014
Mph1103I ATGCAT 1 cut(s) 1803
MroXI GAANNNNTTC 1 cut(s) 1370
MslI CAYNNNNRTG 1 cut(s) 2620
MspA1I CMGCKG 5 cut(s) 998, 1593, 1600, 1977, 2699
MspCI CTTAAG 1 cut(s) 1760
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 4 cut(s) 223, 322, 771, 842
Mva1269I GAATGC 3 cut(s) 442, 1089, 2839
MvaI CCWGG 3 cut(s) 322, 771, 842
MvnI CGCG 5 cut(s) 134, 136, 209, 807, 2549
MwoI GCNNNNNNNGC 8 cut(s) 97, 250, 253, 1781, 1814, 2314, 2645, 2771
NarI GGCGCC 1 cut(s) 443
NciI CCSGG 1 cut(s) 223
NdeII GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
NlaIII CATG 4 cut(s) 874, 1041, 1847, 2420
NlaIV GGNNCC 8 cut(s) 355, 444, 957, 1447, 2005, 2064, 2153, 2616
NmuCI GTSAC 6 cut(s) 47, 1145, 1389, 1656, 2751, 2881
NsiI ATGCAT 1 cut(s) 1803
NspI RCATGY 1 cut(s) 1041
NspV TTCGAA 2 cut(s) 392, 567
PauI GCGCGC 2 cut(s) 132, 134
PciI ACATGT 1 cut(s) 1037
PcsI WCGNNNNNNNCGW 3 cut(s) 389, 1399, 2188
PctI GAATGC 3 cut(s) 442, 1089, 2839
PdmI GAANNNNTTC 1 cut(s) 1370
PflMI CCANNNNNTGG 1 cut(s) 2176
PfoI TCCNGGA 1 cut(s) 221
PkrI GCNGC 8 cut(s) 246, 249, 252, 255, 442, 1669, 1726, 2403
PleI GAGTC 4 cut(s) 247, 1127, 1396, 2449
PluTI GGCGCC 1 cut(s) 446
PpsI GAGTC 4 cut(s) 247, 1127, 1396, 2449
PscI ACATGT 1 cut(s) 1037
PshBI ATTAAT 1 cut(s) 2228
PsiI TTATAA 1 cut(s) 1874
Psp124BI GAGCTC 1 cut(s) 320
Psp6I CCWGG 3 cut(s) 320, 769, 840
PspEI GGTNACC 1 cut(s) 1656
PspGI CCWGG 3 cut(s) 320, 769, 840
PspN4I GGNNCC 8 cut(s) 355, 444, 957, 1447, 2005, 2064, 2153, 2616
PspPI GGNCC 1 cut(s) 1323
PsuI RGATCY 1 cut(s) 2341
PteI GCGCGC 2 cut(s) 132, 134
PvuII CAGCTG 3 cut(s) 998, 1593, 2699
RsaI GTAC 8 cut(s) 662, 1042, 1074, 1231, 1737, 2005, 2161, 2327
RsaNI GTAC 8 cut(s) 661, 1041, 1073, 1230, 1736, 2004, 2160, 2326
RseI CAYNNNNRTG 1 cut(s) 2620
SacI GAGCTC 1 cut(s) 320
SatI GCNGC 8 cut(s) 245, 248, 251, 254, 441, 1668, 1725, 2402
Sau3AI GATC 8 cut(s) 178, 1566, 1696, 2122, 2140, 2179, 2341, 2419
Sau96I GGNCC 1 cut(s) 1323
ScaI AGTACT 2 cut(s) 662, 2161
SchI GAGTC 4 cut(s) 248, 1128, 1397, 2450
ScrFI CCNGG 4 cut(s) 223, 322, 771, 842
SduI GDGCHC 3 cut(s) 320, 832, 2065
SfaNI GCATC 5 cut(s) 808, 1762, 1932, 2673, 2692
SfoI GGCGCC 1 cut(s) 444
SfuI TTCGAA 2 cut(s) 392, 567
SmiMI CAYNNNNRTG 1 cut(s) 2620
SmlI CTYRAG 5 cut(s) 313, 326, 1760, 2085, 2475
SmoI CTYRAG 5 cut(s) 313, 326, 1760, 2085, 2475
SspDI GGCGCC 1 cut(s) 442
SspI AATATT 1 cut(s) 2670
SspMI CTAG 7 cut(s) 699, 1253, 1739, 1793, 1935, 2745, 2852
SstI GAGCTC 1 cut(s) 320
StyD4I CCNGG 4 cut(s) 221, 320, 769, 840
TaaI ACNGT 5 cut(s) 47, 1453, 1475, 2245, 2504
TaiI ACGT 2 cut(s) 2565, 2865
TaqI TCGA 8 cut(s) 154, 342, 392, 455, 567, 1158, 1386, 2191
TatI WGTACW 6 cut(s) 660, 1040, 1072, 1229, 1735, 2159
TauI GCSGC 4 cut(s) 247, 250, 256, 443
TseFI GTSAC 6 cut(s) 47, 1145, 1389, 1656, 2751, 2881
TseI GCWGC 4 cut(s) 250, 1667, 1724, 2401
Tsp45I GTSAC 6 cut(s) 47, 1145, 1389, 1656, 2751, 2881
TspDTI ATGAA 3 cut(s) 911, 1626, 1743
TspGWI ACGGA 1 cut(s) 2377
Van91I CCANNNNNTGG 1 cut(s) 2176
Vha464I CTTAAG 1 cut(s) 1760
VspI ATTAAT 1 cut(s) 2228
XapI RAATTY 3 cut(s) 300, 2462, 2820
XceI RCATGY 1 cut(s) 1041
XcmI CCANNNNNNNNNTGG 2 cut(s) 1997, 2054
XmiI GTMKAC 2 cut(s) 2544, 2848
XmnI GAANNNNTTC 1 cut(s) 1370
XspI CTAG 7 cut(s) 699, 1253, 1739, 1793, 1935, 2745, 2852
ZrmI AGTACT 2 cut(s) 662, 2161
Zsp2I ATGCAT 1 cut(s) 1803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.