Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003840

Physical Location & Seq

Genomic Coordinates Reverse (-)

8303775 .. 8313325

Gene Structure 9551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g12200.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3060 bp

ATGGCGGAGAGGAAAGGCGGCAAAAAACCAGAGAGTCTAAACGACAGCCACTATCGCCTCCTTCAAGACCTCCTCTCTCCTGCTGCTGCTGCTGCTGCTGCCAATCCTTCTTCCACACCCGCCGCAGAGGGCGATAAAGTGGAAATGGAGGAGGTGAAGCCACCGATCGAAGGCCAATGGGTTCACAACCTTCCTCATTTCTCACTCGCTGATTTTGATTCTTCTCCTGAAGAAGAAAAACCTTCAAAGGTTAAGATTGAAGGTAGACGCCGTCTCTGTAAAGTTTCTTATGGGGCCGACAGTGATCATGCTGACAAACAACCAGTGCTTGATGAGCCCAACGTTTTTGGCATTGCTGGTTATGAATCACCGGCAGTGCCGAAAAGAAATCCGAGTAGGACTAGTGCCAATGCTGGCGGGAGTGAGATTAGGGATATTCTTGATGACTTGAGCTCGAGGCTTGAGTTTCTGTCAATTGAGAGGAGGGGTGCTAGAAAAGCGGACATGGTTGAAGGTTCTAATGTGTCTAAAACCAAAGGCAAGGAGGCAGATGCTTATTTGCCGAGTGAACCTCAAGGAGGCAGCCTGCCTACGAAACATGATGGTCAAAAGAAAAGAGAAACTTTATGGGTGGATGAAAAACCAAAAACCGTGGCCCGTCCCCTTGTTCCTAAAGTGGGAAAAAGAGAGGTTGGTGATGAGGATGGCTGTGTATTTTTGAGTGACAATAAGATAGTTAAAGAATCAGGGAGGCAGAGTGGTAATGTTAAAGAGCGCTATGAATCTGATGAGCTTATTGTGATCGATGATTCTACTGATGATTGTGCTCTAGCGACTGATGGTTCTATTACTCTGAATGGTCTCACATCTACTTACAAGTTGCCTGGGAAGATTGCGACGATGTTGTTTCCCCATCAGCGTGATGGCATAAAGTGGCTATGGTCTTTGCATTGTCAGGGAAAGGGTGGAATCTTAGGTGATGACATGGGCTTGGGAAAAACAATGCAGATTTGCAGCTTCTTAGCAGGATTATTTCATTCACGGTTGACTAAAAGAGTTATGCTTGTGGCCCCTAAAACACTGCTTTCCCATTGGATTAAAGAATTATCATCTGTGGGTCTCACTGACAAGATAAGAGAATACTATGGGACTTGCGCTAAAGCACGAAAATATGAGCTTCAGTATGTACTTCAGGACAAAGGCATTCTTCTCACAACTTATGATATTGTGCGGGTTAACTCAAAATCTTTAAGAGGGGATGACTATGTTCATGATGATGGAAGGGAAGATATCATATGGGATTATATGATACTTGATGAGGGGCATCTCATAAAGAACCCTAGTACACAAAGAGCCAAAAGTTTGCTTGAGATACCTTGTGCCCATCGCATTATTGTTAGCGGCACGCCATTGCAAAATAATCTGAAGGAGCTGTGGGCCTTATTCAACTTCTGTTGCCCTGAGCTACTGGGTGATAAGAAATGTTTTAAGGAACAGTTTGAGTCTCTCATTCTTCGTGGAAATGAGAAAAATGCTTCGGATAGGGAAAAGCATATTGGTTCAACGGTTGCGAAGGAACTAAGAGAACGTATTAAACCTTTTTTTCTGCGTCGCTTAAAGAACGAGGTATTTAATGAAGACAGTGACCAAACAAGTGCCAAACTTTCTAAAAAGAATGAAATCATTGTTTGGTTGAGATTGACCGGCTGTCAGCGGAAACTTTATGAAGCTTTTCTAAAGAGTGAGCTGGTTCTTTCTGCTTTTGATGGCTCTCCGTTGGCTGCACTTACGATCCTGAAGAAAATATGTGATCATCCACTTCTATTGACAAAGCGAGCAGCTGAAGATGTACTAGAAGAGATGGATTCAATGTTAAAGCCAGATGAAACTTGCATGGCAGAAAAATTGGCAATGTACATTGCCGATGTTGCTGAGAGAGAGGAGGACTTTGATGAAAAGCATGCCAACCTGTCATGCAAAATATCTTTTATATTGTCTTTACTGGAAAACTTAATTCCTCAGGGGCATAATGTTCTTATCTTCTCTCAAACTCGAAAGATGCTTAATCTTATTCAGGAATCACTAGTATCCCATGGTTACAAGTTCGTACGCATTGATGGAACCACAAAAGCTATTGACAGAATGACGGTTGTTAATGATTTCCAAGAAGGTAATGGAGCTCCCATATTTCTCCTGACATCTCAAGTAGGTGGTTTGGGCCTCACGCTTACAAGAGCAGATCGATTGACTTTAGTGGTTGATCCTGCTTGGAACCCAAGTACAGATAACCAAAGCGTGGATCGTGCATATCGAATTGGACAAAATAAGGATGTCATTGTATACAGATTAATGACTTGTGGGACTGTTGAAGAAAAGATATACAGAAAACAGATATACAAGGGCGGATTGTTTAAAACTGCAACCGAGCATAAAGAACAGATTCGGTACTTTAGTCAGCAGGATCTTCGTGAACTTTTCAGTCTCCCAAAAGAAGGTTTTGATGTATCCCTTACGCAGCAGCAACTTTATGAGGAGCACGATCGCCAGCACACAATGGACAAGTACTTCAAGTCCCATATCGAGTTCTTGGAAACTCAAGGTATAGGAGGAGTCAGTCATCACAGTTTACTCTTCTCCAAGACAGCACCTCTACCTGTCGCCGTAGGGGTAGAAGAGGAAGTTGAAAGAATCAGAGGATCTTCAACAGCGGGAAGTTCATTTTCAAGTTCTTTACAAGAACGCAATGTGAATGGGGCTGAATATGCTTTCAAGCCAAAGGATGTAAACATAAACAAGAAGCCTTCTTCACCTATTGACGCGGATAAATTGACAGAATCAGAGATTAAACAGAGAATCAACAGGCTGTCACAAACTCTTGCAAATAAGGCAATAGTTTCAAGATTACCAGATAAGGGGGAGAAAATACAAAAGCAAATTGGTGAACTGAATGCGGAGCTTTATAGACTTGGAAAAGTGGAAGCGCAAGGAAATGAGAGAAATGTCATCGACTTGGAACTGAATGATGATATAACTGGGGAGTTCCAAAGAGTGATGATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000019 GO:0008150 GO:0009893 GO:0010035 GO:0010038 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0042221 GO:0045911 GO:0045935 GO:0045951 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

1020

Amino Acids

114.35

Weight (kDa)

6.29

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003840)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63950 AT5G63950
fragaria_vesca	FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690
malus_domestica	MD15G1135400.v1.1 MD15G1135700.v1.1
prunus_persica	Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1
pyrus_communis	pycom01g00590 pycom15g12200 pycom15g12220
rosa_chinensis	RchiOBHm_Chr2g0122191
rosa_laevigata	RLG00000018669
rosa_multiflora	Rmu_co7987670.1_g000001 Rmu_co8056046.1_g000001 Rmu_sc0000805.1_g000001 Rmu_sc0003133.1_g000012 Rmu_sc0004574.1_g000007 Rmu_sc0013150.1_g000001 Rmu_sc0025362.1_g000002
rosa_roxburghii	Rroxscaffold_2G00121780
rosa_rugosa	Rorug02G0237100
rosa_samantha	Rh2AG295600 Rh2BG304600 Rh2CG282900 Rh2DG319500
rosa_wichuraiana	Rw2G023540 Rw2G023770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2296
AccI	GTMKAC	2 cut(s)	265, 2340
AccII	CGCG	1 cut(s)	2819
AclI	AACGTT	1 cut(s)	342
AclWI	GGATC	5 cut(s)	1786, 2255, 2307, 2469, 2704
AcuI	CTGAAG	6 cut(s)	249, 1163, 1175, 1445, 1817, 1863
AcyI	GRCGYC	1 cut(s)	268
AfaI	GTAC	8 cut(s)	1188, 1345, 1851, 1916, 2109, 2281, 2447, 2564
AfeI	AGCGCT	1 cut(s)	776
AfiI	CCNNNNNNNGG	6 cut(s)	170, 578, 677, 2296, 2492, 2912
AhdI	GACNNNNNGTC	1 cut(s)	1707
AhlI	ACTAGT	2 cut(s)	401, 2083
AjnI	CCWGG	1 cut(s)	883
AjuI	GAANNNNNNNTTGG	2 cut(s)	1539, 1571
Alw21I	GWGCWC	4 cut(s)	455, 829, 2182, 2538
Alw26I	GTCTC	5 cut(s)	278, 866, 1124, 1509, 2486
AlwI	GGATC	5 cut(s)	1786, 2255, 2307, 2469, 2704
Ama87I	CYCGRG	1 cut(s)	454
Aor51HI	AGCGCT	1 cut(s)	776
AoxI	GGCC	6 cut(s)	172, 294, 654, 1068, 1437, 2218
AseI	ATTAAT	1 cut(s)	2348
Asp700I	GAANNNNTTC	2 cut(s)	1731, 2439
AspLEI	GCGC	3 cut(s)	777, 1157, 2983
AspS9I	GGNCC	5 cut(s)	294, 655, 1069, 1437, 2218
AsuHPI	GGTGA	7 cut(s)	166, 360, 707, 989, 1484, 2799, 2951
AvaI	CYCGRG	1 cut(s)	454
AxyI	CCTNAGG	1 cut(s)	2019
BaeGI	GKGCMC	1 cut(s)	1384
BaeI	ACNNNNGTAYC	2 cut(s)	2437, 2470
BanII	GRGCYC	3 cut(s)	339, 455, 2182
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	4 cut(s)	455, 829, 2182, 2538
BceAI	ACGGC	2 cut(s)	255, 2645
BcgI	CGANNNNNNTGC	2 cut(s)	2447, 2481
BciT130I	CCWGG	1 cut(s)	885
BciVI	GTATCC	2 cut(s)	2098, 2515
BclI	TGATCA	2 cut(s)	304, 1810
BcoDI	GTCTC	5 cut(s)	278, 866, 1124, 1509, 2486
BcuI	ACTAGT	2 cut(s)	401, 2083
BfaI	CTAG	6 cut(s)	402, 492, 830, 1341, 1853, 2084
BfoI	RGCGCY	1 cut(s)	778
BfuI	GTATCC	2 cut(s)	2098, 2515
BmcAI	AGTACT	1 cut(s)	2564
Bme1390I	CCNGG	1 cut(s)	885
BmeRI	GACNNNNNGTC	1 cut(s)	1707
BmeT110I	CYCGRG	1 cut(s)	454
BmgT120I	GGNCC	5 cut(s)	294, 655, 1069, 1437, 2218
BmiI	GGNNCC	4 cut(s)	295, 1071, 2122, 2273
BmrFI	CCNGG	1 cut(s)	885
BmrI	ACTGGG	2 cut(s)	1478, 3042
BmsI	GCATC	3 cut(s)	541, 1333, 2049
BmuI	ACTGGG	2 cut(s)	1478, 3042
BpiI	GAAGAC	1 cut(s)	1644
BplI	GAGNNNNNCTC	2 cut(s)	556, 588
Bpu10I	CCTNAGC	1 cut(s)	1461
BpuEI	CTTGAG	6 cut(s)	469, 482, 558, 1388, 2187, 2580
Bsa29I	ATCGAT	2 cut(s)	804, 2242
BsaHI	GRCGYC	1 cut(s)	268
BsaI	GGTCTC	2 cut(s)	866, 1124
BsaJI	CCNNGG	3 cut(s)	651, 884, 2092
BsaXI	ACNNNNNCTCC	2 cut(s)	742, 772
Bsc4I	CCNNNNNNNGG	6 cut(s)	170, 578, 677, 2296, 2492, 2912
Bse118I	RCCGGY	2 cut(s)	370, 1703
Bse1I	ACTGG	4 cut(s)	323, 1473, 2007, 3037
Bse21I	CCTNAGG	1 cut(s)	2019
Bse3DI	GCAATG	5 cut(s)	351, 1409, 1917, 1917, 2749
BseBI	CCWGG	1 cut(s)	885
BseCI	ATCGAT	2 cut(s)	804, 2242
BseDI	CCNNGG	3 cut(s)	651, 884, 2092
BseGI	GGATG	6 cut(s)	640, 709, 1264, 1813, 2335, 2785
BseLI	CCNNNNNNNGG	6 cut(s)	170, 578, 677, 2296, 2492, 2912
BseMI	GCAATG	5 cut(s)	351, 1409, 1917, 1917, 2749
BseMII	CTCAG	3 cut(s)	1452, 1923, 2033
BseNI	ACTGG	4 cut(s)	323, 1473, 2007, 3037
BseRI	GAGGAG	6 cut(s)	62, 164, 496, 1955, 2546, 2622
BseSI	GKGCMC	1 cut(s)	1384
BsgI	GTGCAG	1 cut(s)	1767
Bsh1236I	CGCG	1 cut(s)	2819
Bsh1285I	CGRYCG	2 cut(s)	168, 2542
BshFI	GGCC	6 cut(s)	174, 296, 656, 1070, 1439, 2220
BshVI	ATCGAT	2 cut(s)	804, 2242
BsiEI	CGRYCG	2 cut(s)	168, 2542
BsiHKAI	GWGCWC	4 cut(s)	455, 829, 2182, 2538
BsiHKCI	CYCGRG	1 cut(s)	454
BsiSI	CCGG	2 cut(s)	371, 1704
BsiWI	CGTACG	1 cut(s)	2107
BslFI	GGGAC	4 cut(s)	645, 1162, 2374, 2557
BslI	CCNNNNNNNGG	6 cut(s)	170, 578, 677, 2296, 2492, 2912
BsmAI	GTCTC	5 cut(s)	278, 866, 1124, 1509, 2486
BsmBI	CGTCTC	1 cut(s)	278
BsmFI	GGGAC	4 cut(s)	645, 1162, 2374, 2557
BsmI	GAATGC	2 cut(s)	1203, 2953
BsnI	GGCC	6 cut(s)	174, 296, 656, 1070, 1439, 2220
Bso31I	GGTCTC	2 cut(s)	866, 1124
BsoBI	CYCGRG	1 cut(s)	454
Bsp1286I	GDGCHC	6 cut(s)	339, 455, 829, 1384, 2182, 2538
Bsp1407I	TGTACA	1 cut(s)	1914
Bsp19I	CCATGG	1 cut(s)	2092
BspANI	GGCC	6 cut(s)	174, 296, 656, 1070, 1439, 2220
BspCNI	CTCAG	3 cut(s)	1453, 1924, 2032
BspDI	ATCGAT	2 cut(s)	804, 2242
BspFNI	CGCG	1 cut(s)	2819
BspHI	TCATGA	1 cut(s)	1270
BspLI	GGNNCC	4 cut(s)	295, 1071, 2122, 2273
BspPI	GGATC	5 cut(s)	1786, 2255, 2307, 2469, 2704
BspTNI	GGTCTC	2 cut(s)	866, 1124
BsrDI	GCAATG	5 cut(s)	351, 1409, 1917, 1917, 2749
BsrFI	RCCGGY	2 cut(s)	370, 1703
BsrGI	TGTACA	1 cut(s)	1914
BsrI	ACTGG	4 cut(s)	323, 1473, 2007, 3037
BssAI	RCCGGY	2 cut(s)	370, 1703
BssECI	CCNNGG	3 cut(s)	651, 884, 2092
BssNAI	GTATAC	1 cut(s)	2341
BssNI	GRCGYC	1 cut(s)	268
BssT1I	CCWWGG	1 cut(s)	2092
Bst1107I	GTATAC	1 cut(s)	2341
Bst2UI	CCWGG	1 cut(s)	885
Bst4CI	ACNGT	9 cut(s)	302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
Bst6I	CTCTTC	3 cut(s)	1851, 2636, 2667
BstACI	GRCGYC	1 cut(s)	268
BstAUI	TGTACA	1 cut(s)	1914
BstC8I	GCNNGC	6 cut(s)	415, 587, 1406, 1836, 1962, 2546
BstDEI	CTNAG	6 cut(s)	973, 1021, 1461, 1580, 1932, 2019
BstDSI	CCRYGG	2 cut(s)	651, 2092
BstENI	CCTNNNNNAGG	1 cut(s)	576
BstF5I	GGATG	6 cut(s)	640, 709, 1264, 1813, 2335, 2785
BstFNI	CGCG	1 cut(s)	2819
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	3 cut(s)	777, 1157, 2983
BstMAI	GTCTC	5 cut(s)	278, 866, 1124, 1509, 2486
BstMCI	CGRYCG	2 cut(s)	168, 2542
BstNI	CCWGG	1 cut(s)	885
BstNSI	RCATGY	1 cut(s)	1964
BstSCI	CCNGG	1 cut(s)	883
BstSLI	GKGCMC	1 cut(s)	1384
BstUI	CGCG	1 cut(s)	2819
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	2 cut(s)	2461, 2696
BstYI	RGATCY	2 cut(s)	2461, 2696
BstZ17I	GTATAC	1 cut(s)	2341
Bsu15I	ATCGAT	2 cut(s)	804, 2242
Bsu36I	CCTNAGG	1 cut(s)	2019
BsuI	GTATCC	2 cut(s)	2098, 2515
BsuRI	GGCC	6 cut(s)	174, 296, 656, 1070, 1439, 2220
BsuTUI	ATCGAT	2 cut(s)	804, 2242
BtgI	CCRYGG	2 cut(s)	651, 2092
BtgZI	GCGATG	1 cut(s)	1370
BtsCI	GGATG	6 cut(s)	640, 709, 1264, 1813, 2335, 2785
BtsI	GCAGTG	2 cut(s)	381, 1079
BtsIMutI	CAGTG	6 cut(s)	307, 330, 381, 1079, 1122, 1648
Cac8I	GCNNGC	6 cut(s)	415, 587, 1406, 1836, 1962, 2546
CciI	TCATGA	1 cut(s)	1270
CfoI	GCGC	3 cut(s)	777, 1157, 2983
Cfr10I	RCCGGY	2 cut(s)	370, 1703
Cfr13I	GGNCC	5 cut(s)	294, 655, 1069, 1437, 2218
ClaI	ATCGAT	2 cut(s)	804, 2242
CseI	GACGC	3 cut(s)	276, 1598, 2825
Csp6I	GTAC	8 cut(s)	1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
CspCI	CAANNNNNGTGG	4 cut(s)	633, 668, 1806, 1841
CviAII	CATG	9 cut(s)	308, 505, 599, 985, 1271, 1894, 1961, 1974, 2093
CviQI	GTAC	8 cut(s)	1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
DdeI	CTNAG	6 cut(s)	973, 1021, 1461, 1580, 1932, 2019
DraI	TTTAAA	1 cut(s)	2413
DriI	GACNNNNNGTC	1 cut(s)	1707
Eam1104I	CTCTTC	3 cut(s)	1851, 2636, 2667
Eam1105I	GACNNNNNGTC	1 cut(s)	1707
EarI	CTCTTC	3 cut(s)	1851, 2636, 2667
EciI	GGCGGA	2 cut(s)	20, 2418
Ecl136II	GAGCTC	2 cut(s)	453, 2180
Eco130I	CCWWGG	1 cut(s)	2092
Eco24I	GRGCYC	3 cut(s)	339, 455, 2182
Eco31I	GGTCTC	2 cut(s)	866, 1124
Eco32I	GATATC	1 cut(s)	1291
Eco47III	AGCGCT	1 cut(s)	776
Eco53kI	GAGCTC	2 cut(s)	453, 2180
Eco57I	CTGAAG	6 cut(s)	249, 1163, 1175, 1445, 1817, 1863
Eco81I	CCTNAGG	1 cut(s)	2019
Eco88I	CYCGRG	1 cut(s)	454
EcoICRI	GAGCTC	2 cut(s)	453, 2180
EcoNI	CCTNNNNNAGG	1 cut(s)	576
EcoRII	CCWGG	1 cut(s)	883
EcoRV	GATATC	1 cut(s)	1291
EcoT14I	CCWWGG	1 cut(s)	2092
EcoT38I	GRGCYC	3 cut(s)	339, 455, 2182
ErhI	CCWWGG	1 cut(s)	2092
Esp3I	CGTCTC	1 cut(s)	278
FaeI	CATG	9 cut(s)	311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
FalI	AAGNNNNNCTT	4 cut(s)	607, 639, 1191, 1223
FaqI	GGGAC	4 cut(s)	645, 1162, 2374, 2557
FatI	CATG	9 cut(s)	307, 504, 598, 984, 1270, 1893, 1960, 1973, 2092
FauI	CCCGC	4 cut(s)	127, 410, 1224, 2701
FauNDI	CATATG	1 cut(s)	1295
FbaI	TGATCA	2 cut(s)	304, 1810
FblI	GTMKAC	2 cut(s)	265, 2340
FokI	GGATG	6 cut(s)	647, 716, 1271, 1800, 2342, 2792
FriOI	GRGCYC	3 cut(s)	339, 455, 2182
FspBI	CTAG	6 cut(s)	402, 492, 830, 1341, 1853, 2084
GlaI	GCGC	3 cut(s)	776, 1156, 2982
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	6 cut(s)	174, 296, 656, 1070, 1439, 2220
HapII	CCGG	2 cut(s)	371, 1704
HgaI	GACGC	3 cut(s)	276, 1598, 2825
HhaI	GCGC	3 cut(s)	777, 1157, 2983
Hin1I	GRCGYC	1 cut(s)	268
Hin1II	CATG	9 cut(s)	311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
Hin6I	GCGC	3 cut(s)	775, 1155, 2981
HinP1I	GCGC	3 cut(s)	775, 1155, 2981
HincII	GTYRAC	2 cut(s)	1047, 1237
HindII	GTYRAC	2 cut(s)	1047, 1237
HindIII	AAGCTT	1 cut(s)	1728
HpaI	GTTAAC	1 cut(s)	1237
HpaII	CCGG	2 cut(s)	371, 1704
HphI	GGTGA	7 cut(s)	166, 360, 707, 989, 1484, 2799, 2951
Hpy188I	TCNGA	7 cut(s)	393, 787, 855, 1425, 1540, 2693, 2839
Hpy99I	CGWCG	2 cut(s)	901, 1614
HpyCH4III	ACNGT	9 cut(s)	302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
HpyCH4IV	ACGT	2 cut(s)	342, 1588
HpyF3I	CTNAG	6 cut(s)	973, 1021, 1461, 1580, 1932, 2019
HpySE526I	ACGT	2 cut(s)	342, 1588
Hsp92I	GRCGYC	1 cut(s)	268
Hsp92II	CATG	9 cut(s)	311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
HspAI	GCGC	3 cut(s)	775, 1155, 2981
Ksp22I	TGATCA	2 cut(s)	304, 1810
KspAI	GTTAAC	1 cut(s)	1237
LmnI	GCTCC	5 cut(s)	1429, 2177, 2185, 2533, 2953
LweI	GCATC	3 cut(s)	541, 1333, 2049
MaeI	CTAG	6 cut(s)	402, 492, 830, 1341, 1853, 2084
MaeII	ACGT	2 cut(s)	342, 1588
MaeIII	GTNAC	4 cut(s)	722, 1643, 2096, 2865
MfeI	CAATTG	1 cut(s)	474
MflI	RGATCY	2 cut(s)	2461, 2696
MhlI	GDGCHC	6 cut(s)	339, 455, 829, 1384, 2182, 2538
MluCI	AATT	7 cut(s)	474, 1103, 1904, 2013, 2313, 2825, 2934
MlyI	GAGTC	3 cut(s)	43, 1511, 2619
MroXI	GAANNNNTTC	2 cut(s)	1731, 2439
MslI	CAYNNNNRTG	2 cut(s)	918, 1275
MspA1I	CMGCKG	3 cut(s)	1714, 1841, 2708
MspI	CCGG	2 cut(s)	371, 1704
MspR9I	CCNGG	1 cut(s)	885
MunI	CAATTG	1 cut(s)	474
Mva1269I	GAATGC	2 cut(s)	1203, 2953
MvaI	CCWGG	1 cut(s)	885
MvnI	CGCG	1 cut(s)	2819
NcoI	CCATGG	1 cut(s)	2092
NdeI	CATATG	1 cut(s)	1295
NlaIII	CATG	9 cut(s)	311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
NlaIV	GGNNCC	4 cut(s)	295, 1071, 2122, 2273
NmeAIII	GCCGAG	1 cut(s)	588
NmuCI	GTSAC	3 cut(s)	722, 1643, 2865
NspI	RCATGY	1 cut(s)	1964
PaeI	GCATGC	1 cut(s)	1964
PaeR7I	CTCGAG	1 cut(s)	454
PagI	TCATGA	1 cut(s)	1270
PcsI	WCGNNNNNNNCGW	1 cut(s)	2308
PctI	GAATGC	2 cut(s)	1203, 2953
PdmI	GAANNNNTTC	2 cut(s)	1731, 2439
Pfl23II	CGTACG	1 cut(s)	2107
PflFI	GACNNNGTC	1 cut(s)	270
PflMI	CCANNNNNTGG	1 cut(s)	2296
Ple19I	CGATCG	2 cut(s)	168, 2542
PleI	GAGTC	3 cut(s)	42, 1510, 2618
PpsI	GAGTC	3 cut(s)	42, 1510, 2618
PshBI	ATTAAT	1 cut(s)	2348
Psp124BI	GAGCTC	2 cut(s)	455, 2182
Psp1406I	AACGTT	1 cut(s)	342
Psp6I	CCWGG	1 cut(s)	883
PspGI	CCWGG	1 cut(s)	883
PspLI	CGTACG	1 cut(s)	2107
PspN4I	GGNNCC	4 cut(s)	295, 1071, 2122, 2273
PspPI	GGNCC	5 cut(s)	294, 655, 1069, 1437, 2218
PspXI	VCTCGAGB	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	2461, 2696
PsyI	GACNNNGTC	1 cut(s)	270
PvuI	CGATCG	2 cut(s)	168, 2542
PvuII	CAGCTG	1 cut(s)	1841
RsaI	GTAC	8 cut(s)	1188, 1345, 1851, 1916, 2109, 2281, 2447, 2564
RsaNI	GTAC	8 cut(s)	1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
RseI	CAYNNNNRTG	2 cut(s)	918, 1275
SacI	GAGCTC	2 cut(s)	455, 2182
Sau96I	GGNCC	5 cut(s)	294, 655, 1069, 1437, 2218
ScaI	AGTACT	1 cut(s)	2564
SchI	GAGTC	3 cut(s)	43, 1511, 2619
ScrFI	CCNGG	1 cut(s)	885
SduI	GDGCHC	6 cut(s)	339, 455, 829, 1384, 2182, 2538
SfaNI	GCATC	3 cut(s)	541, 1333, 2049
Sfr274I	CTCGAG	1 cut(s)	454
SlaI	CTCGAG	1 cut(s)	454
SmiMI	CAYNNNNRTG	2 cut(s)	918, 1275
SmlI	CTYRAG	7 cut(s)	448, 454, 461, 573, 1367, 2202, 2595
SmoI	CTYRAG	7 cut(s)	448, 454, 461, 573, 1367, 2202, 2595
SpeI	ACTAGT	2 cut(s)	401, 2083
SphI	GCATGC	1 cut(s)	1964
Sse9I	AATT	7 cut(s)	474, 1103, 1904, 2013, 2313, 2825, 2934
SspMI	CTAG	6 cut(s)	402, 492, 830, 1341, 1853, 2084
SstI	GAGCTC	2 cut(s)	455, 2182
StyD4I	CCNGG	1 cut(s)	883
StyI	CCWWGG	1 cut(s)	2092
TaaI	ACNGT	9 cut(s)	302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
TaiI	ACGT	2 cut(s)	345, 1591
TaqI	TCGA	8 cut(s)	168, 455, 804, 2053, 2242, 2311, 2580, 3006
TasI	AATT	7 cut(s)	474, 1103, 1904, 2013, 2313, 2825, 2934
TatI	WGTACW	6 cut(s)	1186, 1343, 1849, 1914, 2279, 2562
TauI	GCSGC	3 cut(s)	21, 125, 1404
TscAI	CASTG	6 cut(s)	307, 330, 381, 1086, 1129, 1648
TseFI	GTSAC	3 cut(s)	722, 1643, 2865
Tsp45I	GTSAC	3 cut(s)	722, 1643, 2865
TspGWI	ACGGA	1 cut(s)	1764
TspRI	CASTG	6 cut(s)	307, 330, 381, 1086, 1129, 1648
Tth111I	GACNNNGTC	1 cut(s)	270
Van91I	CCANNNNNTGG	1 cut(s)	2296
VspI	ATTAAT	1 cut(s)	2348
XagI	CCTNNNNNAGG	1 cut(s)	576
XceI	RCATGY	1 cut(s)	1964
XcmI	CCANNNNNNNNNTGG	2 cut(s)	920, 2171
XhoI	CTCGAG	1 cut(s)	454
XmiI	GTMKAC	2 cut(s)	265, 2340
XmnI	GAANNNNTTC	2 cut(s)	1731, 2439
XspI	CTAG	6 cut(s)	402, 492, 830, 1341, 1853, 2084
ZrmI	AGTACT	1 cut(s)	2564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.