Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003133.1

Orthogroup ID

OG0003840

Physical Location & Seq

Genomic Coordinates Forward (+)

57601 .. 67009

Gene Structure 9409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003133.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

atggcggagaggaagagcagcaagaagccccaaagcctcaacgacagtcactatcgtctcctccaagacctcagttctgctcctcccaagccctccgagcaaggaaaggcgactaaggaaaggggagattgtgtggttgtgagggctaagaagacggataaacaagtggggaggcggggtggtggtagctataaagagtactatgattgtgatgaggataacgtggttgatgattctgttccggaggatgatggttctatcactctgagtggtctcacatatacttacaaattacctgggaagattgcaaagatgttgtttccgcatcagcgcgaaggcttgaagtggctatgggctctgcattgccagggtaagggaggaatcttaggagatgacatgggtttgggtaaaacaatgcagatttgtggctatttagccggattatttcattcacgcttgattaaaagggtaatggttgtggctcctaaaactctactttctcattggataaaggaattatcagctgtgggtctctcagacaagataagagaatactatgggacatgtacaaaagctcggaagtatgagcttcagtatgtacttcaggacaaaggcattcttctgactacttatgacattgtgcgagtcaactcaaaatctctaaaagggagtgactatattctcgatgatggaagtgaggatatgatatgggattatatgatacttgatgagggtcatctcataaagaatcccagtacacaaagagccaaaagtttgctagatataccctgttcacatcgcattatagtaagtggcacgccattgcaaaacaatctgaaggagttgtgggccttatttaacttctgttgccctgagctactgggtgataagaactggttcaaggaaagattcgagtcgcgcatttgtcgtggaaatgagaaaaatgcttcagatagggagaagtgtattggttccatggtagcacaggagctcagagaccgtattcaaccttttttcctgcgtcgcctgaagaatgaggtgtttaaggaggataatgaccaaacaaatgccacactttctaaaaagaatgagatcattgtttggctaagattaaccagctgtcagcggaaactttatgaagcatatttaaagagtgagctggttctttctgcttttgatgggtcaccattggctgcacttacgattctgaagaaaatatgtgatcatccacttctattgacaaagcgagctgctgaagatgtactagaagagttggattcattgcttaagccagatgatgcttgtatggcagaaaaactagcaatgcatatagcagatgttgctgagaaagaggagtttgatgagaaccatgcaaatctctcttgcaaaatatcttttataatgtcattgttggataacttgattcctgaggggcataatgttctcatcttttcccaaactagaaagatgcttaatcttattcaggaaacactgatatccagcggttacaagttccaacgcattgatggtaccacaaaagctactgaaagaattaggattgttaatgatttccaagaaggtattggggctcccatatttctcctgacttctcaagttggtggtttgggtcttacacttacaagagctgatcgtgtgatagtggttgatcctgcttggaacccgagtactgatagccagagtgtggatcgtgcatatcgaattgggcagaataaggatgtcattgtatatagattaatgacttgtgcgactgttgaagaaaagatatatagaaaacagatttacaaaggggggttgtttagaactgcaactgagcaaaaagagcagattcggtactttaatcaacaggatcttcgtgaacttttcagtctcccacaacaaggttttgatgtttcccttactcagaagcagctaaatgaggagcgtgatcaacagcacacaatggaagagtctttacaagcccatatagaattcttggaaactcaagggatagctggtgtcagtaaccacagtttactcttctccaagacagcaccacctctgccagaggtagacgcggagcaggaggaagttgaacggattagacgaactttacttgtgagaagctcaacttcaagttcgacacccgaatgtaatgtcaatggggctgaatatgctttcaagcctaaggatgtaatattaaataagaagatgccttcttcaccagctgatgcaggaaaaatgacaaaatcagagattaaagaaaacatcactaggctgtcacaaactcttgcaaataaggctttagtttcaagattacctgataagggacagaaaatacagaggcaaatttctgaattgaatgctgagcttcgtagactagacaaggacgtaattgacttggatgatgtgactgaggagcttaaaggagtggtgatataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000019 GO:0008150 GO:0009893 GO:0010035 GO:0010038 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0042221 GO:0045911 GO:0045935 GO:0045951 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

812

Amino Acids

92.0

Weight (kDa)

6.93

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003840)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63950 AT5G63950
fragaria_vesca	FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690 FvH4_1g24690
malus_domestica	MD15G1135400.v1.1 MD15G1135700.v1.1
prunus_persica	Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1 Prupe.4G275700_v2.0.a1
pyrus_communis	pycom01g00590 pycom15g12200 pycom15g12220
rosa_chinensis	RchiOBHm_Chr2g0122191
rosa_laevigata	RLG00000018669
rosa_multiflora	Rmu_co7987670.1_g000001 Rmu_co8056046.1_g000001 Rmu_sc0000805.1_g000001 Rmu_sc0003133.1_g000012 Rmu_sc0004574.1_g000007 Rmu_sc0013150.1_g000001 Rmu_sc0025362.1_g000002
rosa_roxburghii	Rroxscaffold_2G00121780
rosa_rugosa	Rorug02G0237100
rosa_samantha	Rh2AG295600 Rh2BG304600 Rh2CG282900 Rh2DG319500
rosa_wichuraiana	Rw2G023540 Rw2G023770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1400
Acc65I	GGTACC	1 cut(s)	1529
AccB1I	GGYRCC	1 cut(s)	1529
AccB7I	CCANNNNNTGG	1 cut(s)	1702
AccI	GTMKAC	2 cut(s)	2070, 2374
AccII	CGCG	3 cut(s)	333, 919, 2075
AccIII	TCCGGA	1 cut(s)	241
AciI	CCGC	6 cut(s)	5, 175, 323, 1126, 1503, 2075
AclWI	GGATC	3 cut(s)	1661, 1713, 1875
AcsI	RAATTY	2 cut(s)	1988, 2346
AcuI	CTGAAG	7 cut(s)	575, 587, 857, 933, 1049, 1229, 1275
AfaI	GTAC	8 cut(s)	200, 568, 600, 757, 1263, 1531, 1687, 1853
AfiI	CCNNNNNNNGG	4 cut(s)	373, 1702, 1898, 2324
AflII	CTTAAG	1 cut(s)	1286
AflIII	ACRYGT	1 cut(s)	563
AgsI	TTSAA	9 cut(s)	343, 901, 1007, 1775, 2093, 2133, 2179, 2310, 2359
AjnI	CCWGG	2 cut(s)	295, 366
Alw21I	GWGCWC	1 cut(s)	993
Alw26I	GTCTC	5 cut(s)	62, 278, 536, 990, 1892
AlwI	GGATC	3 cut(s)	1661, 1713, 1875
Ama87I	CYCGRG	1 cut(s)	1681
Aor13HI	TCCGGA	1 cut(s)	241
AoxI	GGCC	1 cut(s)	849
ApeKI	GCWGC	4 cut(s)	18, 1193, 1250, 1927
ApoI	RAATTY	2 cut(s)	1988, 2346
ArsI	GACNNNNNNTTYG	2 cut(s)	2139, 2171
AseI	ATTAAT	1 cut(s)	1754
Asp700I	GAANNNNTTC	1 cut(s)	896
Asp718I	GGTACC	1 cut(s)	1529
AspLEI	GCGC	2 cut(s)	333, 921
AspS9I	GGNCC	1 cut(s)	849
AsuHPI	GGTGA	3 cut(s)	896, 1176, 2211
AvaI	CYCGRG	1 cut(s)	1681
AxyI	CCTNAGG	2 cut(s)	1428, 2184
BanI	GGYRCC	1 cut(s)	1529
BanII	GRGCYC	3 cut(s)	358, 993, 1591
BarI	GAAGNNNNNNTAC	2 cut(s)	1956, 1988
BbsI	GAAGAC	1 cut(s)	158
Bbv12I	GWGCWC	1 cut(s)	993
BbvI	GCAGC	4 cut(s)	30, 1180, 1237, 1939
BccI	CCATC	4 cut(s)	245, 683, 1172, 1520
BciT130I	CCWGG	2 cut(s)	297, 368
BclI	TGATCA	2 cut(s)	1222, 1945
BcoDI	GTCTC	5 cut(s)	62, 278, 536, 990, 1892
BfaI	CTAG	6 cut(s)	779, 1265, 1319, 1461, 2271, 2378
BfrI	CTTAAG	1 cut(s)	1286
BisI	GCNGC	4 cut(s)	19, 1194, 1251, 1928
BlpI	GCTNAGC	1 cut(s)	2364
BlsI	GCNGC	4 cut(s)	20, 1195, 1252, 1929
BmcAI	AGTACT	2 cut(s)	200, 1687
Bme1390I	CCNGG	2 cut(s)	297, 368
BmeT110I	CYCGRG	1 cut(s)	1681
BmgT120I	GGNCC	1 cut(s)	849
BmiI	GGNNCC	5 cut(s)	483, 973, 1531, 1590, 1679
BmrFI	CCNGG	2 cut(s)	297, 368
BmrI	ACTGGG	2 cut(s)	747, 890
BmsI	GCATC	5 cut(s)	334, 1288, 1458, 2199, 2218
BmuI	ACTGGG	2 cut(s)	747, 890
BpiI	GAAGAC	1 cut(s)	158
Bpu10I	CCTNAGC	1 cut(s)	873
Bpu1102I	GCTNAGC	1 cut(s)	2364
BpuEI	CTTGAG	2 cut(s)	1596, 1986
BsaI	GGTCTC	3 cut(s)	278, 536, 990
BsaJI	CCNNGG	3 cut(s)	296, 367, 975
BsaWI	WCCGGW	1 cut(s)	241
BsaXI	ACNNNNNCTCC	4 cut(s)	117, 147, 163, 193
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 1702, 1898, 2324
Bse1I	ACTGG	3 cut(s)	753, 885, 899
Bse21I	CCTNAGG	2 cut(s)	1428, 2184
Bse3DI	GCAATG	4 cut(s)	361, 821, 1280, 1329
BseAI	TCCGGA	1 cut(s)	241
BseBI	CCWGG	2 cut(s)	297, 368
BseDI	CCNNGG	3 cut(s)	296, 367, 975
BseGI	GGATG	5 cut(s)	253, 1225, 1741, 2194, 2407
BseLI	CCNNNNNNNGG	4 cut(s)	373, 1702, 1898, 2324
BseMI	GCAATG	4 cut(s)	361, 821, 1280, 1329
BseNI	ACTGG	3 cut(s)	753, 885, 899
BseRI	GAGGAG	5 cut(s)	50, 72, 1367, 1952, 2429
BseXI	GCAGC	4 cut(s)	30, 1180, 1237, 1939
BsgI	GTGCAG	1 cut(s)	1179
Bsh1236I	CGCG	3 cut(s)	333, 919, 2075
BshFI	GGCC	1 cut(s)	851
BshNI	GGYRCC	1 cut(s)	1529
BsiHKAI	GWGCWC	1 cut(s)	993
BsiHKCI	CYCGRG	1 cut(s)	1681
BsiSI	CCGG	2 cut(s)	242, 438
BslFI	GGGAC	2 cut(s)	574, 2340
BslI	CCNNNNNNNGG	4 cut(s)	373, 1702, 1898, 2324
BsmAI	GTCTC	5 cut(s)	62, 278, 536, 990, 1892
BsmBI	CGTCTC	1 cut(s)	62
BsmFI	GGGAC	2 cut(s)	574, 2340
BsmI	GAATGC	2 cut(s)	615, 2365
BsnI	GGCC	1 cut(s)	851
Bso31I	GGTCTC	3 cut(s)	278, 536, 990
BsoBI	CYCGRG	1 cut(s)	1681
Bsp1286I	GDGCHC	3 cut(s)	358, 993, 1591
Bsp13I	TCCGGA	1 cut(s)	241
Bsp1407I	TGTACA	1 cut(s)	566
Bsp143I	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
Bsp1720I	GCTNAGC	1 cut(s)	2364
Bsp19I	CCATGG	1 cut(s)	975
BspACI	CCGC	6 cut(s)	5, 175, 323, 1126, 1503, 2075
BspANI	GGCC	1 cut(s)	851
BspEI	TCCGGA	1 cut(s)	241
BspFNI	CGCG	3 cut(s)	333, 919, 2075
BspLI	GGNNCC	5 cut(s)	483, 973, 1531, 1590, 1679
BspPI	GGATC	3 cut(s)	1661, 1713, 1875
BspQI	GCTCTTC	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	1529
BspTI	CTTAAG	1 cut(s)	1286
BspTNI	GGTCTC	3 cut(s)	278, 536, 990
BsrDI	GCAATG	4 cut(s)	361, 821, 1280, 1329
BsrGI	TGTACA	1 cut(s)	566
BsrI	ACTGG	3 cut(s)	753, 885, 899
BssECI	CCNNGG	3 cut(s)	296, 367, 975
BssMI	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
BssT1I	CCWWGG	1 cut(s)	975
Bst2UI	CCWGG	2 cut(s)	297, 368
Bst4CI	ACNGT	4 cut(s)	47, 1001, 1771, 2030
Bst6I	CTCTTC	4 cut(s)	8, 1263, 1959, 2042
BstAFI	CTTAAG	1 cut(s)	1286
BstAPI	GCANNNNNTGC	1 cut(s)	1340
BstAUI	TGTACA	1 cut(s)	566
BstC8I	GCNNGC	2 cut(s)	818, 1248
BstDSI	CCRYGG	1 cut(s)	975
BstEII	GGTNACC	1 cut(s)	1182
BstF5I	GGATG	5 cut(s)	253, 1225, 1741, 2194, 2407
BstFNI	CGCG	3 cut(s)	333, 919, 2075
BstHHI	GCGC	2 cut(s)	333, 921
BstKTI	GATC	7 cut(s)	1095, 1225, 1651, 1669, 1708, 1870, 1948
BstMAI	GTCTC	5 cut(s)	62, 278, 536, 990, 1892
BstMBI	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
BstMWI	GCNNNNNNNGC	6 cut(s)	97, 1307, 1340, 1840, 2171, 2297
BstNI	CCWGG	2 cut(s)	297, 368
BstNSI	RCATGY	1 cut(s)	567
BstPI	GGTNACC	1 cut(s)	1182
BstSCI	CCNGG	2 cut(s)	295, 366
BstUI	CGCG	3 cut(s)	333, 919, 2075
BstV1I	GCAGC	4 cut(s)	30, 1180, 1237, 1939
BstV2I	GAAGAC	1 cut(s)	158
BstX2I	RGATCY	1 cut(s)	1867
BstYI	RGATCY	1 cut(s)	1867
Bsu36I	CCTNAGG	2 cut(s)	1428, 2184
BsuRI	GGCC	1 cut(s)	851
BtgI	CCRYGG	1 cut(s)	975
BtgZI	GCGATG	1 cut(s)	782
BtsCI	GGATG	5 cut(s)	253, 1225, 1741, 2194, 2407
BtsIMutI	CAGTG	1 cut(s)	1490
Cac8I	GCNNGC	2 cut(s)	818, 1248
CfoI	GCGC	2 cut(s)	333, 921
Cfr13I	GGNCC	1 cut(s)	849
CseI	GACGC	2 cut(s)	1010, 2081
Csp6I	GTAC	8 cut(s)	199, 567, 599, 756, 1262, 1530, 1686, 1852
CspCI	CAANNNNNGTGG	2 cut(s)	1218, 1253
CviAII	CATG	4 cut(s)	397, 564, 976, 1370
CviQI	GTAC	8 cut(s)	199, 567, 599, 756, 1262, 1530, 1686, 1852
DpnI	GATC	7 cut(s)	1094, 1224, 1650, 1668, 1707, 1869, 1947
DpnII	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
DraI	TTTAAA	1 cut(s)	1149
Eam1104I	CTCTTC	4 cut(s)	8, 1263, 1959, 2042
EarI	CTCTTC	4 cut(s)	8, 1263, 1959, 2042
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	991
Eco130I	CCWWGG	1 cut(s)	975
Eco24I	GRGCYC	3 cut(s)	358, 993, 1591
Eco31I	GGTCTC	3 cut(s)	278, 536, 990
Eco32I	GATATC	1 cut(s)	1497
Eco53kI	GAGCTC	1 cut(s)	991
Eco57I	CTGAAG	7 cut(s)	575, 587, 857, 933, 1049, 1229, 1275
Eco81I	CCTNAGG	2 cut(s)	1428, 2184
Eco88I	CYCGRG	1 cut(s)	1681
Eco91I	GGTNACC	1 cut(s)	1182
EcoICRI	GAGCTC	1 cut(s)	991
EcoO65I	GGTNACC	1 cut(s)	1182
EcoRI	GAATTC	1 cut(s)	1988
EcoRII	CCWGG	2 cut(s)	295, 366
EcoRV	GATATC	1 cut(s)	1497
EcoT14I	CCWWGG	1 cut(s)	975
EcoT22I	ATGCAT	1 cut(s)	1329
EcoT38I	GRGCYC	3 cut(s)	358, 993, 1591
ErhI	CCWWGG	1 cut(s)	975
Esp3I	CGTCTC	1 cut(s)	62
FaeI	CATG	4 cut(s)	400, 567, 979, 1373
FalI	AAGNNNNNCTT	4 cut(s)	603, 635, 2113, 2145
FaqI	GGGAC	2 cut(s)	574, 2340
FatI	CATG	4 cut(s)	396, 563, 975, 1369
FauI	CCCGC	1 cut(s)	168
FbaI	TGATCA	2 cut(s)	1222, 1945
FblI	GTMKAC	2 cut(s)	2070, 2374
Fnu4HI	GCNGC	4 cut(s)	19, 1194, 1251, 1928
FokI	GGATG	5 cut(s)	260, 1212, 1748, 2201, 2414
FriOI	GRGCYC	3 cut(s)	358, 993, 1591
Fsp4HI	GCNGC	4 cut(s)	19, 1194, 1251, 1928
FspBI	CTAG	6 cut(s)	779, 1265, 1319, 1461, 2271, 2378
GlaI	GCGC	2 cut(s)	332, 920
GluI	GCNGC	4 cut(s)	19, 1194, 1251, 1928
HaeIII	GGCC	1 cut(s)	851
HapII	CCGG	2 cut(s)	242, 438
HgaI	GACGC	2 cut(s)	1010, 2081
HhaI	GCGC	2 cut(s)	333, 921
Hin1II	CATG	4 cut(s)	400, 567, 979, 1373
Hin6I	GCGC	2 cut(s)	331, 919
HinP1I	GCGC	2 cut(s)	331, 919
HincII	GTYRAC	1 cut(s)	649
HindII	GTYRAC	1 cut(s)	649
HpaII	CCGG	2 cut(s)	242, 438
HphI	GGTGA	3 cut(s)	896, 1176, 2211
Hpy166II	GTNNAC	7 cut(s)	649, 758, 794, 1877, 2033, 2071, 2375
Hpy188III	TCNNGA	8 cut(s)	242, 605, 683, 1427, 1484, 1603, 1874, 2310
Hpy8I	GTNNAC	7 cut(s)	649, 758, 794, 1877, 2033, 2071, 2375
Hpy99I	CGWCG	1 cut(s)	1026
HpyAV	CCTTC	4 cut(s)	329, 832, 1571, 2223
HpyCH4III	ACNGT	4 cut(s)	47, 1001, 1771, 2030
HpyCH4IV	ACGT	2 cut(s)	222, 2388
HpyF10VI	GCNNNNNNNGC	6 cut(s)	97, 1307, 1340, 1840, 2171, 2297
HpySE526I	ACGT	2 cut(s)	222, 2388
Hsp92II	CATG	4 cut(s)	400, 567, 979, 1373
HspAI	GCGC	2 cut(s)	331, 919
Kpn2I	TCCGGA	1 cut(s)	241
KpnI	GGTACC	1 cut(s)	1533
Ksp22I	TGATCA	2 cut(s)	1222, 1945
Kzo9I	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
LguI	GCTCTTC	1 cut(s)	8
LmnI	GCTCC	7 cut(s)	85, 487, 988, 1594, 1939, 2077, 2416
Lsp1109I	GCAGC	4 cut(s)	30, 1180, 1237, 1939
LweI	GCATC	5 cut(s)	334, 1288, 1458, 2199, 2218
MaeI	CTAG	6 cut(s)	779, 1265, 1319, 1461, 2271, 2378
MaeII	ACGT	2 cut(s)	222, 2388
MaeIII	GTNAC	7 cut(s)	47, 671, 1182, 1505, 2021, 2277, 2407
MalI	GATC	7 cut(s)	1094, 1224, 1650, 1668, 1707, 1869, 1947
MboI	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
MflI	RGATCY	1 cut(s)	1867
MhlI	GDGCHC	3 cut(s)	358, 993, 1591
MluCI	AATT	8 cut(s)	290, 515, 1551, 1719, 1988, 2346, 2354, 2391
MlyI	GAGTC	3 cut(s)	654, 923, 1976
MmeI	TCCRAC	3 cut(s)	1254, 1392, 1540
Mph1103I	ATGCAT	1 cut(s)	1329
MroI	TCCGGA	1 cut(s)	241
MroXI	GAANNNNTTC	1 cut(s)	896
MslI	CAYNNNNRTG	1 cut(s)	2146
MspA1I	CMGCKG	5 cut(s)	524, 1119, 1126, 1503, 2225
MspCI	CTTAAG	1 cut(s)	1286
MspI	CCGG	2 cut(s)	242, 438
MspR9I	CCNGG	2 cut(s)	297, 368
Mva1269I	GAATGC	2 cut(s)	615, 2365
MvaI	CCWGG	2 cut(s)	297, 368
MvnI	CGCG	3 cut(s)	333, 919, 2075
MwoI	GCNNNNNNNGC	6 cut(s)	97, 1307, 1340, 1840, 2171, 2297
NcoI	CCATGG	1 cut(s)	975
NdeII	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
NlaIII	CATG	4 cut(s)	400, 567, 979, 1373
NlaIV	GGNNCC	5 cut(s)	483, 973, 1531, 1590, 1679
NmuCI	GTSAC	5 cut(s)	47, 671, 1182, 2277, 2407
NsiI	ATGCAT	1 cut(s)	1329
NspI	RCATGY	1 cut(s)	567
PciI	ACATGT	1 cut(s)	563
PciSI	GCTCTTC	1 cut(s)	8
PcsI	WCGNNNNNNNCGW	2 cut(s)	1714, 2101
PctI	GAATGC	2 cut(s)	615, 2365
PdmI	GAANNNNTTC	1 cut(s)	896
PfeI	GAWTC	8 cut(s)	233, 381, 748, 909, 1204, 1277, 1423, 1846
PflMI	CCANNNNNTGG	1 cut(s)	1702
PkrI	GCNGC	4 cut(s)	20, 1195, 1252, 1929
PleI	GAGTC	3 cut(s)	653, 922, 1975
PpsI	GAGTC	3 cut(s)	653, 922, 1975
PscI	ACATGT	1 cut(s)	563
PshBI	ATTAAT	1 cut(s)	1754
PsiI	TTATAA	1 cut(s)	1400
Psp124BI	GAGCTC	1 cut(s)	993
Psp6I	CCWGG	2 cut(s)	295, 366
PspEI	GGTNACC	1 cut(s)	1182
PspGI	CCWGG	2 cut(s)	295, 366
PspN4I	GGNNCC	5 cut(s)	483, 973, 1531, 1590, 1679
PspPI	GGNCC	1 cut(s)	849
PsuI	RGATCY	1 cut(s)	1867
PvuII	CAGCTG	3 cut(s)	524, 1119, 2225
RsaI	GTAC	8 cut(s)	200, 568, 600, 757, 1263, 1531, 1687, 1853
RsaNI	GTAC	8 cut(s)	199, 567, 599, 756, 1262, 1530, 1686, 1852
RseI	CAYNNNNRTG	1 cut(s)	2146
SacI	GAGCTC	1 cut(s)	993
SapI	GCTCTTC	1 cut(s)	8
SatI	GCNGC	4 cut(s)	19, 1194, 1251, 1928
Sau3AI	GATC	7 cut(s)	1092, 1222, 1648, 1666, 1705, 1867, 1945
Sau96I	GGNCC	1 cut(s)	849
ScaI	AGTACT	2 cut(s)	200, 1687
SchI	GAGTC	3 cut(s)	654, 923, 1976
ScrFI	CCNGG	2 cut(s)	297, 368
SduI	GDGCHC	3 cut(s)	358, 993, 1591
SfaNI	GCATC	5 cut(s)	334, 1288, 1458, 2199, 2218
SmiMI	CAYNNNNRTG	1 cut(s)	2146
SmlI	CTYRAG	3 cut(s)	1286, 1611, 2001
SmoI	CTYRAG	3 cut(s)	1286, 1611, 2001
Sse9I	AATT	8 cut(s)	290, 515, 1551, 1719, 1988, 2346, 2354, 2391
SsiI	CCGC	6 cut(s)	5, 175, 323, 1126, 1503, 2075
SspI	AATATT	1 cut(s)	2196
SspMI	CTAG	6 cut(s)	779, 1265, 1319, 1461, 2271, 2378
SstI	GAGCTC	1 cut(s)	993
StyD4I	CCNGG	2 cut(s)	295, 366
StyI	CCWWGG	1 cut(s)	975
TaaI	ACNGT	4 cut(s)	47, 1001, 1771, 2030
TaiI	ACGT	2 cut(s)	225, 2391
TaqI	TCGA	4 cut(s)	684, 912, 1717, 2138
TasI	AATT	8 cut(s)	290, 515, 1551, 1719, 1988, 2346, 2354, 2391
TatI	WGTACW	6 cut(s)	198, 566, 598, 755, 1261, 1685
TfiI	GAWTC	8 cut(s)	233, 381, 748, 909, 1204, 1277, 1423, 1846
TscAI	CASTG	1 cut(s)	1497
TseFI	GTSAC	5 cut(s)	47, 671, 1182, 2277, 2407
TseI	GCWGC	4 cut(s)	18, 1193, 1250, 1927
Tsp45I	GTSAC	5 cut(s)	47, 671, 1182, 2277, 2407
TspDTI	ATGAA	3 cut(s)	437, 1152, 1269
TspGWI	ACGGA	2 cut(s)	170, 2110
TspRI	CASTG	1 cut(s)	1497
Van91I	CCANNNNNTGG	1 cut(s)	1702
Vha464I	CTTAAG	1 cut(s)	1286
VspI	ATTAAT	1 cut(s)	1754
XapI	RAATTY	2 cut(s)	1988, 2346
XceI	RCATGY	1 cut(s)	567
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1523, 1580
XmiI	GTMKAC	2 cut(s)	2070, 2374
XmnI	GAANNNNTTC	1 cut(s)	896
XspI	CTAG	6 cut(s)	779, 1265, 1319, 1461, 2271, 2378
ZrmI	AGTACT	2 cut(s)	200, 1687
Zsp2I	ATGCAT	1 cut(s)	1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.