FvH4_1g04070

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005071
Physical Location & Seq
Reverse (-)
2150392 .. 2152371
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04070.t1

Sequence Viewer

Length: 1980 bp
ATGTCTGAGCTCAAGCAAATCCACGCACAGCTCCTCCGGAATGGTCTCTTCTTCGACGCATTCACCGCCAGCAAAATCGTTGCCTTTTCGGCTTTAGAAGACTCCGGAAACCTCACTTATTCCCGTTTAGTCCTCAGCCAAATCCCCAATCCCAATGGTTTCACTTGTAATTCGGTTATCCGAGGCTATACGAACAAGGGTTTATATCGGGAAGCCATTTCTTTTTACCATGAAATGATTGTACAGGGTTGGATACCTGACCGGTTCACATTCCCTTCTTTGTTCAAGTCATGTAAGGATTTGGGTGAAGGGAAACAGCTGCATTGTCAATCTACCAAGCTAGGCTTCGCTTCCGATTCGTACATTCAGAACACTCTGATGAACATGTACTCGAATTGCGGGTGTTTGGTTTCTTCACGGAAGGTGTTTGATAAAATGAGTGACAAGAGTGTGGTGTCTTGGGCGACCATGATTGACGCTTATGCGCAGTGGGATCAATCAACTGAGGCTTTAAAGCTCTTCGATAAGATGGGGAGGGAAAATGTGGATCCTAATGAGGTTACTTTGCTTAATGTTTTGACTGCTTGTGGGATGGCGAGGGATTTAGAAACTGCAAAAAGGGTGCACCGGTACATTGAGGACTATGGTTTTGGGTCGCATTTGAAGCTCAGTACGGCTCTTATGGATGTTTATTGCAAATGTGGATGTGTATCGCTTGCGCGAGAATTGTTCGACAAGATGCCTGAGAAGAACTTGTTTTGTTGGAACATCATGATCAATGGACATGTTGAGGAAAGTAATTACGATGAGGCGTTCCTACTCTTTCGTAGAATGCAACTCGAGGGAGAAAAGGGGGATAAGGTGACTATGGTGAGTTTATTGCTTGCTTGCAGCAATTTGGGAGCTCTAGAGCTTGGAAAGTGGCTGCATGCCTATATTGAAAAGCAGAAAATTGAGGTGGATGTTGCCCTCGGGACGACTCTAGTTGACATGTACGCCAAGTGCGGGAGCATAGACATTGCATCGGATGTTTTCCGAACACTGCCTGAGAAGGATTTGATGACTTGGACAGCGTTAATTTCTGGTTTTGCAATGTGTGGTGAAGGGAAGAAGGCTTTGGAGCATTTCCATGAGATGCAGATGAGTGGAGTGAAGCCAGATGCAATAGTCTTTGTTGGGGTATTGGCTGCTTGCAGCCATGCTGGGTTAGTGGATGAAGCACTGTCGCATTTTAACTCAATGTCTGAAGTGTATGGGATTCAGCCTAGCATTGAACACTATGGCTGTATGGTTGACGTGTTAGGCAGAGCTGGTCGCATAGCTGAAGCAGAGGAGTTGATTCAGAAGATGCAAATGAAACCAGATCGTTTTGTTTTGGGAGGGCTTCTTGGTGCCTGCAGAATCCATGGTAACCTTGAGGCAGCAGAAAGAGCAGCTAAACAGCTCCTAGAACTTAGTCCATACGATGAAGGAACATATGTGCTTCTATCAAACTTATACAGCTCTATGGGAAAATGGGAAGAAGCTAAAAAAATTAGGAAACTCATGGCAGAAAGGAATATAAAGAAACCTCCTGGATGCAGCCTGATTGAGGTAGATGGAACTGTCCATGAATTTGTGAAGGGTGATTCATCTCACCAACAAACCGCAAATATCTACGAAATGCTTGATGACATGATCAGCCGATTGAAGAAAGCCGGTTATGTCCCTCAGAAATCTGAGGTGTCGTTCGATATGGATGAAGAAGACAAGGAGACTGCACATAGCCTCCACAGCGAAAAACTAGCCATTGCATTTGGGCTGATAAGTACAAACCCTGGGACAACAATACGAGTAGTGAAAAACCTTCGTGTATGCAGCGATTGCCACACTGCAACCAAGCTCATCTCCAAAGTTTACAACAGGGAAATAATAGTTAGGGACAGGAATCGCTTCCATCAATTTAAGGATGGTTCTTGTTCATGTAAGGATTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

660

Amino Acids

73.97

Weight (kDa)

6.13

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 51 - 98 9e-10 PPR repeat family
PPR PF01535 54 - 83 7.7e-06 PPR repeat
PPR_2 PF13041 150 - 196 5.2e-09 PPR repeat family
PPR PF01535 152 - 182 7.7e-06 PPR repeat
PPR_2 PF13041 251 - 298 1e-07 PPR repeat family
PPR_2 PF13041 352 - 398 9e-08 PPR repeat family
PPR PF01535 355 - 384 3.1e-06 PPR repeat
E_motif PF20431 469 - 531 1.2e-21 E motif
DYW_deaminase PF14432 567 - 659 1.1e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 486
AccB1I GGYRCC 1 cut(s) 1391
AccII CGCG 1 cut(s) 721
AccIII TCCGGA 2 cut(s) 36, 104
AciI CCGC 4 cut(s) 66, 399, 1005, 1647
AclWI GGATC 3 cut(s) 501, 542, 555
AcsI RAATTY 1 cut(s) 1613
AcuI CTGAAG 2 cut(s) 1266, 1344
AfaI GTAC 7 cut(s) 243, 362, 389, 632, 673, 995, 1810
AfiI CCNNNNNNNGG 2 cut(s) 1005, 1591
AflIII ACRYGT 4 cut(s) 384, 784, 990, 1296
AgeI ACCGGT 2 cut(s) 261, 627
AgsI TTSAA 5 cut(s) 286, 664, 941, 1274, 1690
AjiI CACGTC 1 cut(s) 1297
AjnI CCWGG 2 cut(s) 1573, 1816
AjuI GAANNNNNNNTTGG 4 cut(s) 329, 361, 1100, 1132
Alw21I GWGCWC 3 cut(s) 12, 627, 907
Alw26I GTCTC 2 cut(s) 50, 1748
Alw44I GTGCAC 1 cut(s) 623
AlwI GGATC 3 cut(s) 501, 542, 555
Ama87I CYCGRG 2 cut(s) 839, 971
Aor13HI TCCGGA 2 cut(s) 36, 104
ApaLI GTGCAC 1 cut(s) 623
ApeKI GCWGC 9 cut(s) 319, 891, 925, 1187, 1194, 1421, 1433, 1581, 1857
ApoI RAATTY 1 cut(s) 1613
ArsI GACNNNNNNTTYG 2 cut(s) 632, 664
AsiGI ACCGGT 2 cut(s) 261, 627
Asp700I GAANNNNTTC 1 cut(s) 1931
AspLEI GCGC 2 cut(s) 487, 721
AsuHPI GGTGA 7 cut(s) 55, 317, 874, 883, 1112, 1628, 1637
AvaI CYCGRG 2 cut(s) 839, 971
BaeGI GKGCMC 1 cut(s) 627
BamHI GGATCC 1 cut(s) 547
BanI GGYRCC 1 cut(s) 1391
BanII GRGCYC 2 cut(s) 12, 907
BbsI GAAGAC 2 cut(s) 105, 1752
Bbv12I GWGCWC 3 cut(s) 12, 627, 907
BbvCI CCTCAGC 1 cut(s) 134
BbvI GCAGC 9 cut(s) 306, 903, 912, 1174, 1206, 1433, 1445, 1593, 1869
BccI CCATC 5 cut(s) 523, 586, 1592, 1943, 1944
BceAI ACGGC 1 cut(s) 690
BciT130I CCWGG 2 cut(s) 1575, 1818
BciVI GTATCC 1 cut(s) 246
BclI TGATCA 2 cut(s) 774, 1677
BcoDI GTCTC 2 cut(s) 50, 1748
BfaI CTAG 6 cut(s) 341, 908, 983, 1266, 1448, 1784
BfmI CTRYAG 1 cut(s) 1396
BfuI GTATCC 1 cut(s) 246
BglI GCCNNNNNGGC 1 cut(s) 89
BisI GCNGC 9 cut(s) 320, 892, 926, 1188, 1195, 1422, 1434, 1582, 1858
BlsI GCNGC 9 cut(s) 321, 893, 927, 1189, 1196, 1423, 1435, 1583, 1859
Bme1390I CCNGG 2 cut(s) 1575, 1818
BmeT110I CYCGRG 2 cut(s) 839, 971
BmgBI CACGTC 1 cut(s) 1297
BmiI GGNNCC 2 cut(s) 549, 1393
BmrFI CCNGG 2 cut(s) 1575, 1818
BmsI GCATC 6 cut(s) 729, 1031, 1125, 1150, 1338, 1568
BpiI GAAGAC 2 cut(s) 105, 1752
Bpu10I CCTNAGC 1 cut(s) 134
BpuEI CTTGAG 1 cut(s) 1436
BsaBI GATNNNNATC 1 cut(s) 709
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 5 cut(s) 181, 970, 1405, 1816, 1817
BsaWI WCCGGW 4 cut(s) 36, 104, 261, 627
BsaXI ACNNNNNCTCC 4 cut(s) 18, 48, 1752, 1782
Bsc4I CCNNNNNNNGG 2 cut(s) 1005, 1591
Bse118I RCCGGY 3 cut(s) 261, 627, 1697
Bse3DI GCAATG 3 cut(s) 1017, 1098, 1788
Bse8I GATNNNNATC 1 cut(s) 709
BseAI TCCGGA 2 cut(s) 36, 104
BseBI CCWGG 2 cut(s) 1575, 1818
BseDI CCNNGG 5 cut(s) 181, 970, 1405, 1816, 1817
BseGI GGATG 9 cut(s) 597, 691, 710, 967, 1033, 1219, 1583, 1744, 1954
BseJI GATNNNNATC 1 cut(s) 709
BseLI CCNNNNNNNGG 2 cut(s) 1005, 1591
BseMI GCAATG 3 cut(s) 1017, 1098, 1788
BseMII CTCAG 7 cut(s) 148, 495, 682, 735, 1038, 1710, 1724
BseRI GAGGAG 2 cut(s) 23, 1346
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 9 cut(s) 306, 903, 912, 1174, 1206, 1433, 1445, 1593, 1869
BseYI CCCAGC 1 cut(s) 1202
BsgI GTGCAG 1 cut(s) 1743
Bsh1236I CGCG 1 cut(s) 721
BshNI GGYRCC 1 cut(s) 1391
BshTI ACCGGT 2 cut(s) 261, 627
BsiHKAI GWGCWC 3 cut(s) 12, 627, 907
BsiHKCI CYCGRG 2 cut(s) 839, 971
BsiSI CCGG 5 cut(s) 37, 105, 262, 628, 1698
BslFI GGGAC 4 cut(s) 988, 1691, 1834, 1934
BslI CCNNNNNNNGG 2 cut(s) 1005, 1591
BsmAI GTCTC 2 cut(s) 50, 1748
BsmFI GGGAC 4 cut(s) 988, 1691, 1834, 1934
BsmI GAATGC 2 cut(s) 59, 837
Bso31I GGTCTC 1 cut(s) 50
BsoBI CYCGRG 2 cut(s) 839, 971
Bsp1286I GDGCHC 3 cut(s) 12, 627, 907
Bsp13I TCCGGA 2 cut(s) 36, 104
Bsp1407I TGTACA 1 cut(s) 241
Bsp143I GATC 5 cut(s) 493, 547, 774, 1363, 1677
Bsp19I CCATGG 1 cut(s) 1405
BspACI CCGC 4 cut(s) 66, 399, 1005, 1647
BspCNI CTCAG 7 cut(s) 147, 496, 681, 736, 1039, 1711, 1723
BspEI TCCGGA 2 cut(s) 36, 104
BspFNI CGCG 1 cut(s) 721
BspHI TCATGA 1 cut(s) 771
BspLI GGNNCC 2 cut(s) 549, 1393
BspMAI CTGCAG 1 cut(s) 1400
BspPI GGATC 3 cut(s) 501, 542, 555
BspQI GCTCTTC 1 cut(s) 524
BspT107I GGYRCC 1 cut(s) 1391
BspTNI GGTCTC 1 cut(s) 50
BsrDI GCAATG 3 cut(s) 1017, 1098, 1788
BsrFI RCCGGY 3 cut(s) 261, 627, 1697
BsrGI TGTACA 1 cut(s) 241
BssAI RCCGGY 3 cut(s) 261, 627, 1697
BssECI CCNNGG 5 cut(s) 181, 970, 1405, 1816, 1817
BssMI GATC 5 cut(s) 493, 547, 774, 1363, 1677
BssT1I CCWWGG 1 cut(s) 1405
Bst2UI CCWGG 2 cut(s) 1575, 1818
Bst4CI ACNGT 2 cut(s) 1224, 1606
Bst6I CTCTTC 2 cut(s) 53, 524
BstAPI GCANNNNNTGC 1 cut(s) 1863
BstAUI TGTACA 1 cut(s) 241
BstC8I GCNNGC 7 cut(s) 70, 717, 885, 889, 930, 1192, 1396
BstDEI CTNAG 9 cut(s) 6, 134, 504, 668, 744, 1047, 1454, 1710, 1719
BstDSI CCRYGG 1 cut(s) 1405
BstEII GGTNACC 1 cut(s) 1409
BstENI CCTNNNNNAGG 1 cut(s) 1589
BstF5I GGATG 9 cut(s) 597, 691, 710, 967, 1033, 1219, 1583, 1744, 1954
BstFNI CGCG 1 cut(s) 721
BstHHI GCGC 2 cut(s) 487, 721
BstKTI GATC 5 cut(s) 496, 550, 777, 1366, 1680
BstMAI GTCTC 2 cut(s) 50, 1748
BstMBI GATC 5 cut(s) 493, 547, 774, 1363, 1677
BstMWI GCNNNNNNNGC 6 cut(s) 65, 89, 664, 1430, 1773, 1863
BstNI CCWGG 2 cut(s) 1575, 1818
BstNSI RCATGY 4 cut(s) 388, 788, 932, 994
BstPI GGTNACC 1 cut(s) 1409
BstSCI CCNGG 2 cut(s) 1573, 1816
BstSFI CTRYAG 1 cut(s) 1396
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 1 cut(s) 721
BstV1I GCAGC 9 cut(s) 306, 903, 912, 1174, 1206, 1433, 1445, 1593, 1869
BstV2I GAAGAC 2 cut(s) 105, 1752
BstX2I RGATCY 1 cut(s) 547
BstYI RGATCY 1 cut(s) 547
BsuI GTATCC 1 cut(s) 246
BtgI CCRYGG 1 cut(s) 1405
BtrI CACGTC 1 cut(s) 1297
BtsCI GGATG 9 cut(s) 597, 691, 710, 967, 1033, 1219, 1583, 1744, 1954
BtsI GCAGTG 3 cut(s) 494, 1040, 1869
BtsIMutI CAGTG 4 cut(s) 494, 1040, 1220, 1869
Cac8I GCNNGC 7 cut(s) 70, 717, 885, 889, 930, 1192, 1396
CciI TCATGA 1 cut(s) 771
CfoI GCGC 2 cut(s) 487, 721
Cfr10I RCCGGY 3 cut(s) 261, 627, 1697
CseI GACGC 2 cut(s) 65, 485
Csp6I GTAC 7 cut(s) 242, 361, 388, 631, 672, 994, 1809
CspAI ACCGGT 2 cut(s) 261, 627
CviQI GTAC 7 cut(s) 242, 361, 388, 631, 672, 994, 1809
DdeI CTNAG 9 cut(s) 6, 134, 504, 668, 744, 1047, 1454, 1710, 1719
DpnI GATC 5 cut(s) 495, 549, 776, 1365, 1679
DpnII GATC 5 cut(s) 493, 547, 774, 1363, 1677
DraI TTTAAA 1 cut(s) 513
Eam1104I CTCTTC 2 cut(s) 53, 524
EarI CTCTTC 2 cut(s) 53, 524
Ecl136II GAGCTC 2 cut(s) 10, 905
Eco130I CCWWGG 1 cut(s) 1405
Eco24I GRGCYC 2 cut(s) 12, 907
Eco31I GGTCTC 1 cut(s) 50
Eco53kI GAGCTC 2 cut(s) 10, 905
Eco57I CTGAAG 2 cut(s) 1266, 1344
Eco88I CYCGRG 2 cut(s) 839, 971
Eco91I GGTNACC 1 cut(s) 1409
EcoICRI GAGCTC 2 cut(s) 10, 905
EcoNI CCTNNNNNAGG 1 cut(s) 1589
EcoO65I GGTNACC 1 cut(s) 1409
EcoRII CCWGG 2 cut(s) 1573, 1816
EcoT14I CCWWGG 1 cut(s) 1405
EcoT38I GRGCYC 2 cut(s) 12, 907
ErhI CCWWGG 1 cut(s) 1405
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 4 cut(s) 988, 1691, 1834, 1934
FauI CCCGC 2 cut(s) 392, 998
FauNDI CATATG 1 cut(s) 1477
FbaI TGATCA 2 cut(s) 774, 1677
Fnu4HI GCNGC 9 cut(s) 320, 892, 926, 1188, 1195, 1422, 1434, 1582, 1858
FokI GGATG 9 cut(s) 604, 698, 717, 974, 1040, 1226, 1590, 1751, 1961
FriOI GRGCYC 2 cut(s) 12, 907
Fsp4HI GCNGC 9 cut(s) 320, 892, 926, 1188, 1195, 1422, 1434, 1582, 1858
FspBI CTAG 6 cut(s) 341, 908, 983, 1266, 1448, 1784
FspI TGCGCA 1 cut(s) 486
GlaI GCGC 2 cut(s) 486, 720
GluI GCNGC 9 cut(s) 320, 892, 926, 1188, 1195, 1422, 1434, 1582, 1858
GsaI CCCAGC 1 cut(s) 1206
HapII CCGG 5 cut(s) 37, 105, 262, 628, 1698
HgaI GACGC 2 cut(s) 65, 485
HhaI GCGC 2 cut(s) 487, 721
Hin6I GCGC 2 cut(s) 485, 719
HinP1I GCGC 2 cut(s) 485, 719
HincII GTYRAC 2 cut(s) 988, 1294
HindII GTYRAC 2 cut(s) 988, 1294
HinfI GANTC 8 cut(s) 101, 356, 979, 1258, 1339, 1401, 1628, 1927
HpaII CCGG 5 cut(s) 37, 105, 262, 628, 1698
HphI GGTGA 7 cut(s) 55, 317, 874, 883, 1112, 1628, 1637
Hpy166II GTNNAC 5 cut(s) 267, 625, 988, 1294, 1897
Hpy188III TCNNGA 6 cut(s) 37, 105, 209, 772, 908, 973
Hpy8I GTNNAC 5 cut(s) 267, 625, 988, 1294, 1897
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 9 cut(s) 285, 302, 415, 1045, 1097, 1105, 1463, 1615, 1856
HpyCH4III ACNGT 2 cut(s) 1224, 1606
HpyCH4IV ACGT 1 cut(s) 1296
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 89, 664, 1430, 1773, 1863
HpyF3I CTNAG 9 cut(s) 6, 134, 504, 668, 744, 1047, 1454, 1710, 1719
HpySE526I ACGT 1 cut(s) 1296
HspAI GCGC 2 cut(s) 485, 719
Kpn2I TCCGGA 2 cut(s) 36, 104
Ksp22I TGATCA 2 cut(s) 774, 1677
Kzo9I GATC 5 cut(s) 493, 547, 774, 1363, 1677
LguI GCTCTTC 1 cut(s) 524
LmnI GCTCC 5 cut(s) 36, 902, 1008, 1120, 1449
Lsp1109I GCAGC 9 cut(s) 306, 903, 912, 1174, 1206, 1433, 1445, 1593, 1869
LweI GCATC 6 cut(s) 729, 1031, 1125, 1150, 1338, 1568
MaeI CTAG 6 cut(s) 341, 908, 983, 1266, 1448, 1784
MaeII ACGT 1 cut(s) 1296
MaeIII GTNAC 4 cut(s) 440, 559, 862, 1409
MalI GATC 5 cut(s) 495, 549, 776, 1365, 1679
MboI GATC 5 cut(s) 493, 547, 774, 1363, 1677
MflI RGATCY 1 cut(s) 547
MhlI GDGCHC 3 cut(s) 12, 627, 907
MlyI GAGTC 2 cut(s) 95, 973
MmeI TCCRAC 2 cut(s) 230, 743
MroI TCCGGA 2 cut(s) 36, 104
MroXI GAANNNNTTC 1 cut(s) 1931
MseI TTAA 5 cut(s) 512, 570, 1076, 1233, 1944
MslI CAYNNNNRTG 2 cut(s) 377, 1128
MspA1I CMGCKG 1 cut(s) 319
MspI CCGG 5 cut(s) 37, 105, 262, 628, 1698
MspR9I CCNGG 2 cut(s) 1575, 1818
Mva1269I GAATGC 2 cut(s) 59, 837
MvaI CCWGG 2 cut(s) 1575, 1818
MvnI CGCG 1 cut(s) 721
MwoI GCNNNNNNNGC 6 cut(s) 65, 89, 664, 1430, 1773, 1863
NcoI CCATGG 1 cut(s) 1405
NdeI CATATG 1 cut(s) 1477
NdeII GATC 5 cut(s) 493, 547, 774, 1363, 1677
NlaIV GGNNCC 2 cut(s) 549, 1393
NmuCI GTSAC 2 cut(s) 440, 862
NsbI TGCGCA 1 cut(s) 486
NspI RCATGY 4 cut(s) 388, 788, 932, 994
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 839
PagI TCATGA 1 cut(s) 771
PasI CCCWGGG 1 cut(s) 1817
PciI ACATGT 3 cut(s) 384, 784, 990
PciSI GCTCTTC 1 cut(s) 524
PctI GAATGC 2 cut(s) 59, 837
PdmI GAANNNNTTC 1 cut(s) 1931
PfeI GAWTC 6 cut(s) 356, 1258, 1339, 1401, 1628, 1927
PfoI TCCNGGA 1 cut(s) 1573
PinAI ACCGGT 2 cut(s) 261, 627
PkrI GCNGC 9 cut(s) 321, 893, 927, 1189, 1196, 1423, 1435, 1583, 1859
PleI GAGTC 2 cut(s) 95, 973
PpsI GAGTC 2 cut(s) 95, 973
PscI ACATGT 3 cut(s) 384, 784, 990
Psp124BI GAGCTC 2 cut(s) 12, 907
Psp6I CCWGG 2 cut(s) 1573, 1816
PspEI GGTNACC 1 cut(s) 1409
PspFI CCCAGC 1 cut(s) 1202
PspGI CCWGG 2 cut(s) 1573, 1816
PspN4I GGNNCC 2 cut(s) 549, 1393
PspXI VCTCGAGB 1 cut(s) 839
PstI CTGCAG 1 cut(s) 1400
PsuI RGATCY 1 cut(s) 547
PvuII CAGCTG 1 cut(s) 319
RsaI GTAC 7 cut(s) 243, 362, 389, 632, 673, 995, 1810
RsaNI GTAC 7 cut(s) 242, 361, 388, 631, 672, 994, 1809
RseI CAYNNNNRTG 2 cut(s) 377, 1128
SacI GAGCTC 2 cut(s) 12, 907
SapI GCTCTTC 1 cut(s) 524
SaqAI TTAA 5 cut(s) 512, 570, 1076, 1233, 1944
SatI GCNGC 9 cut(s) 320, 892, 926, 1188, 1195, 1422, 1434, 1582, 1858
Sau3AI GATC 5 cut(s) 493, 547, 774, 1363, 1677
SchI GAGTC 2 cut(s) 95, 973
ScrFI CCNGG 2 cut(s) 1575, 1818
SduI GDGCHC 3 cut(s) 12, 627, 907
SfaNI GCATC 6 cut(s) 729, 1031, 1125, 1150, 1338, 1568
SfcI CTRYAG 1 cut(s) 1396
Sfr274I CTCGAG 1 cut(s) 839
SlaI CTCGAG 1 cut(s) 839
SmiMI CAYNNNNRTG 2 cut(s) 377, 1128
SmlI CTYRAG 3 cut(s) 11, 839, 1415
SmoI CTYRAG 3 cut(s) 11, 839, 1415
SphI GCATGC 1 cut(s) 932
SsiI CCGC 4 cut(s) 66, 399, 1005, 1647
SspMI CTAG 6 cut(s) 341, 908, 983, 1266, 1448, 1784
SstI GAGCTC 2 cut(s) 12, 907
StyD4I CCNGG 2 cut(s) 1573, 1816
StyI CCWWGG 1 cut(s) 1405
TaaI ACNGT 2 cut(s) 1224, 1606
TaiI ACGT 1 cut(s) 1299
TaqI TCGA 6 cut(s) 54, 392, 522, 732, 840, 1731
TatI WGTACW 3 cut(s) 241, 387, 1808
TfiI GAWTC 6 cut(s) 356, 1258, 1339, 1401, 1628, 1927
Tru1I TTAA 5 cut(s) 512, 570, 1076, 1233, 1944
Tru9I TTAA 5 cut(s) 512, 570, 1076, 1233, 1944
TscAI CASTG 4 cut(s) 494, 1047, 1227, 1876
TseFI GTSAC 2 cut(s) 440, 862
TseI GCWGC 9 cut(s) 319, 891, 925, 1187, 1194, 1421, 1433, 1581, 1857
Tsp45I GTSAC 2 cut(s) 440, 862
TspDTI ATGAA 9 cut(s) 246, 395, 1230, 1370, 1482, 1620, 1626, 1755, 1950
TspGWI ACGGA 1 cut(s) 433
TspRI CASTG 4 cut(s) 494, 1047, 1227, 1876
VneI GTGCAC 1 cut(s) 623
XagI CCTNNNNNAGG 1 cut(s) 1589
XapI RAATTY 1 cut(s) 1613
XbaI TCTAGA 1 cut(s) 907
XceI RCATGY 4 cut(s) 388, 788, 932, 994
XhoI CTCGAG 1 cut(s) 839
XmnI GAANNNNTTC 1 cut(s) 1931
XspI CTAG 6 cut(s) 341, 908, 983, 1266, 1448, 1784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.