pycom02g03280

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0005071
Physical Location & Seq
Reverse (-)
2152406 .. 2154562
2157 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g03280.1

Sequence Viewer

Length: 2157 bp
ATGGCGGCTCCTCTTTCCCTCCACCACATTAGACCGCCTTTCAATTCCGACATCCCACACTTATACACCAAACCCACCACAGCCACCGCCATCGCCGCCACGGCCGCCGTCGCAACCGTCACCAAAAACCCAATTGAACCGCACCCATGTCTCACATTTCTAGACAAATGTTCTACAATGTCCGAGCTCAAGCAAATCCACGCCCAACTTCTCCGAACCGGGCTCTTCTTCGACGCCTTCACGGCCAGCAAAGTCGTCGCCTTTTCCGCTCTGGAAGGGTCTGGGAGCCTCCGTTATGCCCGTTTAGTCCTAAACCAAATCCCCAATCCCACTACTTACACTTGTAACTCGGTTATCCGTGGCTACACTAACAAGGATTTGAACCGGGACGCTATTCTTTTCTACCAAGAAATGATTTTGCAAGGTTGGGTGCCTGACAGGTTCACATTCCCATCTCTGTTCAAGTCGTGCGGGGATTTGCATGAGGGAAAACAGCTGCATTGCCACTCTACGAAGTTTGGTTTCGCTTCGGATTCATACATTCAGAACACTCTGATGAACATGTATGCGAATTGTGGATGTTTGGTCTCTGCTCGGAAGGTATTCGACAAAATGACTGAGAAGAGTGTGGTTTCTTGGGCAACCATGATTGATGCTTATGCGAAATGGGATCAACCCGTTGAAGCTTTGTGGTTGTTTGAGAGGATGGAGAGTGAAAATGTGGATCCTAACGAGGTTACATTGGTTAACGTTTTGACTGCGTGTGCGAGGGCGAGGGATTTAGACATGGCAAAAATGGTGCACCGGTGCATCGATAATTACGGTTTTGGGAGCCATTTAAAGCTCAACACGGCGCTCTTGGATGTTTATTGCAAGTGTGGATGTGTATCGCTTGCTCGAGATTTGTTTGACACAATGCGGGAGAAGAACTTGTTCAGTTGGAACATCATGATCAATGGACATGTTGAGGACAGTAACTACGATGAAGCGTTCCTCCTCTTTCGAGAAATGCAGCTCAAAGGAGAAAAGGGAGATCAGGTGACTATGGTGAGTTTGTTGCTTGCTTGCAGCCATTTGGGTGCTTTAGAGCTTGGTAAGTGGTTGCATGCCTATATAGAAAAGGAGAAAATTAAGGTTGACGTTGCCCTTGGGACGACGCTTGTTGACATGTATGCAAAATGTGGGAGCATAGACGATGCATTGGAAGTTTTCCGAAAGCTGCCTGAGAAGGATGTTATGACTTGGACAGCGTTGATTTCTGGTTTTGCGATGTGTGGACAAGGGAAGAAGGCTTTGGAGCATTTCCATGAGATGCAGAAGGGTGGGATGAAACCGGATGCAATAACATTTGTTGGGGTATTGGCTGCTTGTAGTCATGCTGGATTAGTAGACGAGGGGATCTCGCATTTTAACTCAATGTCTGAAGGGTATGGCATTCAGCCTAGCATTGAACACTACGGTGGTATGGTTGACATATTAGGCCGAGCTGGTCGCATTGCCGAAGCAGAGGAGTTGATTCGGAAGATGCAAATGCCGCCGGATCGTTTTGTTTTGGGAGGGCTTCTTGGTGCCTGCAGAGTCCATGGCAACCTTGAGGCTGCAGAAAGAGTTGCTCGACAGCTTCTAGAACTTGACCCGAACGATGATGGGGCGTATGTGCTTCTATCAAACTTGTATAGTTCTATGAAGAAGTGGGATGAGGCCAAAAGAATCAGGGCACTCATGGCAGAAAGAAATGTGAAGAAAGCTCAAGGTTGCAGTCTGATTGAGGTTGATGGCATTGTCCATGAATTTGTGAAGGGCGATTCATCTCACCCGCAAACAAGCAGCATCTATGAAATGCTGGAAGACATGATCAGCCGGTTGAAGAAAGCCGGTTATGTTCCTGAGAAATCTGAGGTGTTGTTGGATATAGATGAAGAAGAGAAGGAGACTGCACTCAGCCTCCACAGTGAAAAGCTGGCAATTGCATTTGGGCTCATAAGCACAAAACCGAGGACAACAATACGAGTAGTGAAAAACCTGAGAGTATGCAGCGATTGCCACACTGCAACCAAGCTCATCTCGAAAGTTTACAACAGAGAAATAATCGTGCGGGACAGAAGCCGCTTTCATCGGTTTAGGGATGGATCTTGTTCCTGTAAGGATTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

719

Amino Acids

80.4

Weight (kDa)

6.48

Isoelectric Point (pI)

32.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 110 - 157 1.4e-07 PPR repeat family
PPR_2 PF13041 209 - 257 1.6e-08 PPR repeat family
PPR PF01535 211 - 241 9.8e-07 PPR repeat
PPR_2 PF13041 310 - 357 7.7e-09 PPR repeat family
PPR PF01535 312 - 341 2e-06 PPR repeat
PPR_2 PF13041 410 - 458 3.7e-11 PPR repeat family
PPR PF01535 414 - 442 4e-06 PPR repeat
E_motif PF20431 528 - 590 5.2e-19 E motif
DYW_deaminase PF14432 626 - 718 3.1e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 430, 1568
AccBSI CCGCTC 1 cut(s) 269
AccI GTMKAC 1 cut(s) 1389
AclI AACGTT 1 cut(s) 750
AclWI GGATC 6 cut(s) 678, 719, 732, 1406, 1548, 2137
AcoI YGGCCR 2 cut(s) 102, 243
AcsI RAATTY 1 cut(s) 1790
AcuI CTGAAG 1 cut(s) 1443
AcyI GRCGYC 1 cut(s) 234
AflIII ACRYGT 3 cut(s) 561, 961, 1167
AgeI ACCGGT 1 cut(s) 804
AgsI TTSAA 7 cut(s) 43, 137, 382, 463, 683, 1451, 1867
AjuI GAANNNNNNNTTGG 2 cut(s) 1277, 1309
AleI CACNNNNGTG 1 cut(s) 1458
Alw21I GWGCWC 2 cut(s) 189, 804
Alw26I GTCTC 3 cut(s) 155, 592, 1925
Alw44I GTGCAC 1 cut(s) 800
AlwI GGATC 6 cut(s) 678, 719, 732, 1406, 1548, 2137
Ama87I CYCGRG 1 cut(s) 897
AoxI GGCC 4 cut(s) 102, 243, 1480, 1701
ApaLI GTGCAC 1 cut(s) 800
ApeKI GCWGC 8 cut(s) 496, 1012, 1068, 1219, 1364, 1598, 1827, 2034
ApoI RAATTY 1 cut(s) 1790
AsiGI ACCGGT 1 cut(s) 804
Asp700I GAANNNNTTC 2 cut(s) 602, 932
AspLEI GCGC 1 cut(s) 856
AsuC2I CCSGG 2 cut(s) 220, 386
AsuHPI GGTGA 4 cut(s) 112, 1051, 1060, 1805
AvaI CYCGRG 1 cut(s) 897
BaeGI GKGCMC 2 cut(s) 804, 1720
BamHI GGATCC 1 cut(s) 724
BanI GGYRCC 2 cut(s) 430, 1568
BanII GRGCYC 3 cut(s) 189, 225, 1980
BbsI GAAGAC 1 cut(s) 1854
Bbv12I GWGCWC 2 cut(s) 189, 804
BbvI GCAGC 8 cut(s) 483, 1024, 1080, 1206, 1351, 1585, 1839, 2046
BccI CCATC 6 cut(s) 98, 460, 700, 1640, 1769, 2120
BceAI ACGGC 4 cut(s) 92, 117, 258, 867
BcgI CGANNNNNNTGC 2 cut(s) 238, 272
BclI TGATCA 2 cut(s) 951, 1854
BcnI CCSGG 2 cut(s) 220, 386
BcoDI GTCTC 3 cut(s) 155, 592, 1925
BfaI CTAG 3 cut(s) 161, 1443, 1625
BfmI CTRYAG 2 cut(s) 1573, 1599
BfoI RGCGCY 1 cut(s) 857
BglI GCCNNNNNGGC 2 cut(s) 101, 242
Bme1390I CCNGG 2 cut(s) 220, 386
BmeT110I CYCGRG 1 cut(s) 897
BmiI GGNNCC 6 cut(s) 9, 287, 432, 726, 833, 1570
BmrFI CCNGG 2 cut(s) 220, 386
BmsI GCATC 7 cut(s) 643, 819, 1186, 1302, 1327, 1515, 1839
BpiI GAAGAC 1 cut(s) 1854
BplI GAGNNNNNCTC 2 cut(s) 1385, 1417
BpuEI CTTGAG 3 cut(s) 173, 1613, 1734
BpuMI CCSGG 2 cut(s) 220, 386
Bsa29I ATCGAT 1 cut(s) 813
BsaBI GATNNNNATC 1 cut(s) 886
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 592
BsaJI CCNNGG 5 cut(s) 99, 358, 1147, 1582, 1994
BsaWI WCCGGW 2 cut(s) 804, 1333
BsaXI ACNNNNNCTCC 6 cut(s) 277, 307, 1023, 1053, 1929, 1959
Bse118I RCCGGY 3 cut(s) 804, 1860, 1874
Bse3DI GCAATG 2 cut(s) 499, 1494
Bse8I GATNNNNATC 1 cut(s) 886
BseCI ATCGAT 1 cut(s) 813
BseDI CCNNGG 5 cut(s) 99, 358, 1147, 1582, 1994
BseJI GATNNNNATC 1 cut(s) 886
BseMI GCAATG 2 cut(s) 499, 1494
BseMII CTCAG 6 cut(s) 609, 1215, 1878, 1887, 1954, 2015
BseRI GAGGAG 2 cut(s) 986, 1523
BseSI GKGCMC 2 cut(s) 804, 1720
BseX3I CGGCCG 1 cut(s) 102
BseXI GCAGC 8 cut(s) 483, 1024, 1080, 1206, 1351, 1585, 1839, 2046
BsgI GTGCAG 1 cut(s) 1920
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 4 cut(s) 104, 245, 1482, 1703
BshNI GGYRCC 2 cut(s) 430, 1568
BshTI ACCGGT 1 cut(s) 804
BshVI ATCGAT 1 cut(s) 813
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 189, 804
BsiHKCI CYCGRG 1 cut(s) 897
BsiSI CCGG 7 cut(s) 219, 385, 805, 1334, 1538, 1861, 1875
BslFI GGGAC 3 cut(s) 401, 1165, 2111
BsmAI GTCTC 3 cut(s) 155, 592, 1925
BsmFI GGGAC 3 cut(s) 401, 1165, 2111
BsmI GAATGC 1 cut(s) 1434
BsnI GGCC 4 cut(s) 104, 245, 1482, 1703
Bso31I GGTCTC 1 cut(s) 592
BsoBI CYCGRG 1 cut(s) 897
Bsp1286I GDGCHC 5 cut(s) 189, 225, 804, 1720, 1980
Bsp143I GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
Bsp19I CCATGG 1 cut(s) 1582
BspANI GGCC 4 cut(s) 104, 245, 1482, 1703
BspCNI CTCAG 6 cut(s) 610, 1216, 1879, 1888, 1953, 2016
BspDI ATCGAT 1 cut(s) 813
BspHI TCATGA 1 cut(s) 948
BspLI GGNNCC 6 cut(s) 9, 287, 432, 726, 833, 1570
BspMAI CTGCAG 2 cut(s) 1577, 1603
BspPI GGATC 6 cut(s) 678, 719, 732, 1406, 1548, 2137
BspQI GCTCTTC 1 cut(s) 230
BspT107I GGYRCC 2 cut(s) 430, 1568
BspTNI GGTCTC 1 cut(s) 592
BsrBI CCGCTC 1 cut(s) 269
BsrDI GCAATG 2 cut(s) 499, 1494
BsrFI RCCGGY 3 cut(s) 804, 1860, 1874
BssAI RCCGGY 3 cut(s) 804, 1860, 1874
BssECI CCNNGG 5 cut(s) 99, 358, 1147, 1582, 1994
BssMI GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 2 cut(s) 1147, 1582
Bst4CI ACNGT 5 cut(s) 118, 824, 974, 1460, 1952
Bst6I CTCTTC 3 cut(s) 230, 617, 1917
BstACI GRCGYC 1 cut(s) 234
BstAPI GCANNNNNTGC 1 cut(s) 2040
BstC8I GCNNGC 7 cut(s) 247, 894, 1062, 1066, 1107, 1573, 1962
BstDEI CTNAG 6 cut(s) 618, 1224, 1887, 1896, 1940, 2024
BstDSI CCRYGG 3 cut(s) 99, 358, 1582
BstH2I RGCGCY 1 cut(s) 857
BstHHI GCGC 1 cut(s) 856
BstKTI GATC 8 cut(s) 673, 727, 954, 1036, 1401, 1543, 1857, 2132
BstMAI GTCTC 3 cut(s) 155, 592, 1925
BstMBI GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 9 cut(s) 95, 101, 104, 110, 242, 266, 1534, 1724, 2040
BstNSI RCATGY 4 cut(s) 565, 965, 1109, 1171
BstSCI CCNGG 2 cut(s) 218, 384
BstSFI CTRYAG 2 cut(s) 1573, 1599
BstSLI GKGCMC 2 cut(s) 804, 1720
BstV1I GCAGC 8 cut(s) 483, 1024, 1080, 1206, 1351, 1585, 1839, 2046
BstV2I GAAGAC 1 cut(s) 1854
BstX2I RGATCY 3 cut(s) 724, 1398, 2129
BstYI RGATCY 3 cut(s) 724, 1398, 2129
BstZI CGGCCG 1 cut(s) 102
Bsu15I ATCGAT 1 cut(s) 813
BsuRI GGCC 4 cut(s) 104, 245, 1482, 1703
BsuTUI ATCGAT 1 cut(s) 813
BtgI CCRYGG 3 cut(s) 99, 358, 1582
BtgZI GCGATG 2 cut(s) 76, 1283
BtsI GCAGTG 1 cut(s) 2046
BtsIMutI CAGTG 2 cut(s) 1957, 2046
Cac8I GCNNGC 7 cut(s) 247, 894, 1062, 1066, 1107, 1573, 1962
CciI TCATGA 1 cut(s) 948
CfoI GCGC 1 cut(s) 856
Cfr10I RCCGGY 3 cut(s) 804, 1860, 1874
ClaI ATCGAT 1 cut(s) 813
CseI GACGC 3 cut(s) 242, 398, 1165
CspAI ACCGGT 1 cut(s) 804
DdeI CTNAG 6 cut(s) 618, 1224, 1887, 1896, 1940, 2024
DpnI GATC 8 cut(s) 672, 726, 953, 1035, 1400, 1542, 1856, 2131
DpnII GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
DraI TTTAAA 1 cut(s) 840
EaeI YGGCCR 2 cut(s) 102, 243
EagI CGGCCG 1 cut(s) 102
Eam1104I CTCTTC 3 cut(s) 230, 617, 1917
EarI CTCTTC 3 cut(s) 230, 617, 1917
Ecl136II GAGCTC 1 cut(s) 187
EclXI CGGCCG 1 cut(s) 102
Eco130I CCWWGG 2 cut(s) 1147, 1582
Eco24I GRGCYC 3 cut(s) 189, 225, 1980
Eco31I GGTCTC 1 cut(s) 592
Eco52I CGGCCG 1 cut(s) 102
Eco53kI GAGCTC 1 cut(s) 187
Eco57I CTGAAG 1 cut(s) 1443
Eco88I CYCGRG 1 cut(s) 897
EcoICRI GAGCTC 1 cut(s) 187
EcoT14I CCWWGG 2 cut(s) 1147, 1582
EcoT22I ATGCAT 1 cut(s) 1201
EcoT38I GRGCYC 3 cut(s) 189, 225, 1980
ErhI CCWWGG 2 cut(s) 1147, 1582
FaqI GGGAC 3 cut(s) 401, 1165, 2111
FauI CCCGC 4 cut(s) 464, 912, 1824, 2088
FbaI TGATCA 2 cut(s) 951, 1854
FblI GTMKAC 1 cut(s) 1389
FriOI GRGCYC 3 cut(s) 189, 225, 1980
FspBI CTAG 3 cut(s) 161, 1443, 1625
GlaI GCGC 1 cut(s) 855
HaeII RGCGCY 1 cut(s) 857
HaeIII GGCC 4 cut(s) 104, 245, 1482, 1703
HapII CCGG 7 cut(s) 219, 385, 805, 1334, 1538, 1861, 1875
HgaI GACGC 3 cut(s) 242, 398, 1165
HhaI GCGC 1 cut(s) 856
Hin1I GRCGYC 1 cut(s) 234
Hin6I GCGC 1 cut(s) 854
HinP1I GCGC 1 cut(s) 854
HincII GTYRAC 4 cut(s) 748, 1138, 1165, 1471
HindII GTYRAC 4 cut(s) 748, 1138, 1165, 1471
HindIII AAGCTT 1 cut(s) 684
HinfI GANTC 5 cut(s) 533, 1516, 1578, 1710, 1805
HpaI GTTAAC 1 cut(s) 748
HpaII CCGG 7 cut(s) 219, 385, 805, 1334, 1538, 1861, 1875
HphI GGTGA 4 cut(s) 112, 1051, 1060, 1805
Hpy166II GTNNAC 9 cut(s) 444, 748, 802, 1138, 1165, 1277, 1390, 1471, 2074
Hpy188III TCNNGA 8 cut(s) 161, 272, 899, 949, 1004, 1625, 1886, 2065
Hpy8I GTNNAC 9 cut(s) 444, 748, 802, 1138, 1165, 1277, 1390, 1471, 2074
Hpy99I CGWCG 4 cut(s) 113, 236, 260, 1159
HpyAV CCTTC 9 cut(s) 247, 269, 592, 1222, 1282, 1312, 1418, 1792, 1921
HpyCH4III ACNGT 5 cut(s) 118, 824, 974, 1460, 1952
HpyCH4IV ACGT 2 cut(s) 750, 1140
HpyF10VI GCNNNNNNNGC 9 cut(s) 95, 101, 104, 110, 242, 266, 1534, 1724, 2040
HpyF3I CTNAG 6 cut(s) 618, 1224, 1887, 1896, 1940, 2024
HpySE526I ACGT 2 cut(s) 750, 1140
Hsp92I GRCGYC 1 cut(s) 234
HspAI GCGC 1 cut(s) 854
Ksp22I TGATCA 2 cut(s) 951, 1854
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
LguI GCTCTTC 1 cut(s) 230
LmnI GCTCC 5 cut(s) 13, 285, 831, 1185, 1297
Lsp1109I GCAGC 8 cut(s) 483, 1024, 1080, 1206, 1351, 1585, 1839, 2046
LweI GCATC 7 cut(s) 643, 819, 1186, 1302, 1327, 1515, 1839
MaeI CTAG 3 cut(s) 161, 1443, 1625
MaeII ACGT 2 cut(s) 750, 1140
MaeIII GTNAC 5 cut(s) 118, 344, 736, 974, 1039
MalI GATC 8 cut(s) 672, 726, 953, 1035, 1400, 1542, 1856, 2131
MbiI CCGCTC 1 cut(s) 269
MboI GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
MfeI CAATTG 2 cut(s) 132, 1965
MflI RGATCY 3 cut(s) 724, 1398, 2129
MhlI GDGCHC 5 cut(s) 189, 225, 804, 1720, 1980
MluCI AATT 7 cut(s) 43, 132, 571, 817, 1128, 1790, 1965
MlyI GAGTC 1 cut(s) 1587
MmeI TCCRAC 3 cut(s) 72, 920, 1887
Mph1103I ATGCAT 1 cut(s) 1201
MroXI GAANNNNTTC 2 cut(s) 602, 932
MseI TTAA 4 cut(s) 747, 839, 1131, 1410
MslI CAYNNNNRTG 4 cut(s) 554, 1077, 1305, 1458
MspA1I CMGCKG 1 cut(s) 496
MspI CCGG 7 cut(s) 219, 385, 805, 1334, 1538, 1861, 1875
MspR9I CCNGG 2 cut(s) 220, 386
MunI CAATTG 2 cut(s) 132, 1965
Mva1269I GAATGC 1 cut(s) 1434
MwoI GCNNNNNNNGC 9 cut(s) 95, 101, 104, 110, 242, 266, 1534, 1724, 2040
NciI CCSGG 2 cut(s) 220, 386
NcoI CCATGG 1 cut(s) 1582
NdeII GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
NlaIV GGNNCC 6 cut(s) 9, 287, 432, 726, 833, 1570
NmeAIII GCCGAG 1 cut(s) 1508
NmuCI GTSAC 2 cut(s) 118, 1039
NsiI ATGCAT 1 cut(s) 1201
NspI RCATGY 4 cut(s) 565, 965, 1109, 1171
OliI CACNNNNGTG 1 cut(s) 1458
PaeI GCATGC 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 897
PagI TCATGA 1 cut(s) 948
PciI ACATGT 3 cut(s) 561, 961, 1167
PciSI GCTCTTC 1 cut(s) 230
PctI GAATGC 1 cut(s) 1434
PdmI GAANNNNTTC 2 cut(s) 602, 932
PfeI GAWTC 4 cut(s) 533, 1516, 1710, 1805
PinAI ACCGGT 1 cut(s) 804
PleI GAGTC 1 cut(s) 1586
PpsI GAGTC 1 cut(s) 1586
PscI ACATGT 3 cut(s) 561, 961, 1167
Psp124BI GAGCTC 1 cut(s) 189
Psp1406I AACGTT 1 cut(s) 750
PspN4I GGNNCC 6 cut(s) 9, 287, 432, 726, 833, 1570
PstI CTGCAG 2 cut(s) 1577, 1603
PsuI RGATCY 3 cut(s) 724, 1398, 2129
PvuII CAGCTG 1 cut(s) 496
RseI CAYNNNNRTG 4 cut(s) 554, 1077, 1305, 1458
SacI GAGCTC 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 230
SaqAI TTAA 4 cut(s) 747, 839, 1131, 1410
Sau3AI GATC 8 cut(s) 670, 724, 951, 1033, 1398, 1540, 1854, 2129
SchI GAGTC 1 cut(s) 1587
ScrFI CCNGG 2 cut(s) 220, 386
SduI GDGCHC 5 cut(s) 189, 225, 804, 1720, 1980
SfaNI GCATC 7 cut(s) 643, 819, 1186, 1302, 1327, 1515, 1839
SfcI CTRYAG 2 cut(s) 1573, 1599
Sfr274I CTCGAG 1 cut(s) 897
SgrAI CRCCGGYG 1 cut(s) 804
SlaI CTCGAG 1 cut(s) 897
SmiMI CAYNNNNRTG 4 cut(s) 554, 1077, 1305, 1458
SmlI CTYRAG 4 cut(s) 188, 897, 1592, 1749
SmoI CTYRAG 4 cut(s) 188, 897, 1592, 1749
SphI GCATGC 1 cut(s) 1109
Sse9I AATT 7 cut(s) 43, 132, 571, 817, 1128, 1790, 1965
SspMI CTAG 3 cut(s) 161, 1443, 1625
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 2 cut(s) 218, 384
StyI CCWWGG 2 cut(s) 1147, 1582
TaaI ACNGT 5 cut(s) 118, 824, 974, 1460, 1952
TaiI ACGT 2 cut(s) 753, 1143
TaqI TCGA 7 cut(s) 231, 606, 813, 898, 1003, 1615, 2066
TasI AATT 7 cut(s) 43, 132, 571, 817, 1128, 1790, 1965
TauI GCSGC 5 cut(s) 8, 98, 107, 1537, 2109
TfiI GAWTC 4 cut(s) 533, 1516, 1710, 1805
Tru1I TTAA 4 cut(s) 747, 839, 1131, 1410
Tru9I TTAA 4 cut(s) 747, 839, 1131, 1410
TscAI CASTG 2 cut(s) 1957, 2053
TseFI GTSAC 2 cut(s) 118, 1039
TseI GCWGC 8 cut(s) 496, 1012, 1068, 1219, 1364, 1598, 1827, 2034
Tsp45I GTSAC 2 cut(s) 118, 1039
TspGWI ACGGA 2 cut(s) 281, 347
TspRI CASTG 2 cut(s) 1957, 2053
VneI GTGCAC 1 cut(s) 800
XapI RAATTY 1 cut(s) 1790
XbaI TCTAGA 2 cut(s) 160, 1624
XceI RCATGY 4 cut(s) 565, 965, 1109, 1171
XhoI CTCGAG 1 cut(s) 897
XmiI GTMKAC 1 cut(s) 1389
XmnI GAANNNNTTC 2 cut(s) 602, 932
XspI CTAG 3 cut(s) 161, 1443, 1625
Zsp2I ATGCAT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.