Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08070 AT1G08070 |
| fragaria_vesca | FvH4_1g03710 FvH4_1g04070 |
| malus_domestica | MD02G1039500.v1.1 MD15G1176200.v1.1 MD15G1180300.v1.1 |
| prunus_persica | Prupe.7G236200_v2.0.a1 Prupe.7G239300_v2.0.a1 |
| pyrus_communis | pycom02g03280 pycom15g15800 pycom15g16170 pycom15g16180 |
| rosa_chinensis | RchiOBHm_Chr2g0089161 RchiOBHm_Chr2g0089561 |
| rosa_laevigata | RLG00000015999 RLG00000016040 |
| rosa_multiflora | Rmu_co8347093.1_g000001 Rmu_sc0006193.1_g000005 Rmu_sc0008909.1_g000002 Rmu_sc0023591.1_g000001 |
| rosa_rugosa | Rorug01G0488000 Rorug02G0001500 |
| rosa_samantha | Rh2AG043600 Rh2BG042300 Rh2CG043600 Rh2CG047500 Rh2DG042700 |
| rosa_wichuraiana | Rw2G003400 Rw2G003590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 35, 96 |
| AcsI | RAATTY | 1 cut(s) | 183 |
| AgsI | TTSAA | 2 cut(s) | 43, 125 |
| AluBI | AGCT | 2 cut(s) | 159, 175 |
| AluI | AGCT | 2 cut(s) | 159, 175 |
| Alw21I | GWGCWC | 1 cut(s) | 177 |
| Alw26I | GTCTC | 1 cut(s) | 143 |
| ApoI | RAATTY | 1 cut(s) | 183 |
| AsuHPI | GGTGA | 1 cut(s) | 100 |
| BanII | GRGCYC | 1 cut(s) | 177 |
| Bbv12I | GWGCWC | 1 cut(s) | 177 |
| BccI | CCATC | 1 cut(s) | 98 |
| BcoDI | GTCTC | 1 cut(s) | 143 |
| BfaI | CTAG | 1 cut(s) | 149 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 1 cut(s) | 161 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 143, 173 |
| BseGI | GGATG | 1 cut(s) | 51 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| Bsh1285I | CGRYCG | 1 cut(s) | 105 |
| BsiEI | CGRYCG | 1 cut(s) | 105 |
| BsiHKAI | GWGCWC | 1 cut(s) | 177 |
| BsmAI | GTCTC | 1 cut(s) | 143 |
| Bsp1286I | GDGCHC | 1 cut(s) | 177 |
| Bsp143I | GATC | 1 cut(s) | 102 |
| BspACI | CCGC | 2 cut(s) | 35, 96 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BssMI | GATC | 1 cut(s) | 102 |
| Bst4CI | ACNGT | 1 cut(s) | 166 |
| BstF5I | GGATG | 1 cut(s) | 51 |
| BstKTI | GATC | 1 cut(s) | 105 |
| BstMAI | GTCTC | 1 cut(s) | 143 |
| BstMBI | GATC | 1 cut(s) | 102 |
| BstMCI | CGRYCG | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 95 |
| BtgZI | GCGATG | 1 cut(s) | 76 |
| BtsCI | GGATG | 1 cut(s) | 51 |
| CviJI | RGCY | 5 cut(s) | 8, 83, 89, 159, 175 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 83, 89, 159, 175 |
| DpnI | GATC | 1 cut(s) | 104 |
| DpnII | GATC | 1 cut(s) | 102 |
| Ecl136II | GAGCTC | 1 cut(s) | 175 |
| Eco24I | GRGCYC | 1 cut(s) | 177 |
| Eco53kI | GAGCTC | 1 cut(s) | 175 |
| EcoICRI | GAGCTC | 1 cut(s) | 175 |
| EcoT38I | GRGCYC | 1 cut(s) | 177 |
| FaiI | YATR | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 1 cut(s) | 38 |
| FriOI | GRGCYC | 1 cut(s) | 177 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HphI | GGTGA | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 3 cut(s) | 49, 172, 203 |
| HpyCH4III | ACNGT | 1 cut(s) | 166 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 95 |
| Kzo9I | GATC | 1 cut(s) | 102 |
| LmnI | GCTCC | 2 cut(s) | 13, 164 |
| MaeI | CTAG | 1 cut(s) | 149 |
| MaeIII | GTNAC | 1 cut(s) | 106 |
| MalI | GATC | 1 cut(s) | 104 |
| MboI | GATC | 1 cut(s) | 102 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MhlI | GDGCHC | 1 cut(s) | 177 |
| MluCI | AATT | 4 cut(s) | 27, 43, 120, 183 |
| MmeI | TCCRAC | 1 cut(s) | 72 |
| MnlI | CCTC | 2 cut(s) | 21, 29 |
| MunI | CAATTG | 1 cut(s) | 120 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 95 |
| NdeII | GATC | 1 cut(s) | 102 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| Ple19I | CGATCG | 1 cut(s) | 105 |
| Psp124BI | GAGCTC | 1 cut(s) | 177 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| PvuI | CGATCG | 1 cut(s) | 105 |
| SacI | GAGCTC | 1 cut(s) | 177 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 1 cut(s) | 102 |
| SduI | GDGCHC | 1 cut(s) | 177 |
| SetI | ASST | 2 cut(s) | 161, 177 |
| SgeI | CNNG | 8 cut(s) | 112, 147, 152, 161, 178, 184, 190, 200 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 4 cut(s) | 27, 43, 120, 183 |
| SsiI | CCGC | 2 cut(s) | 35, 96 |
| SspMI | CTAG | 1 cut(s) | 149 |
| SstI | GAGCTC | 1 cut(s) | 177 |
| TaaI | ACNGT | 1 cut(s) | 166 |
| TasI | AATT | 4 cut(s) | 27, 43, 120, 183 |
| TauI | GCSGC | 1 cut(s) | 98 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| XapI | RAATTY | 1 cut(s) | 183 |
| XspI | CTAG | 1 cut(s) | 149 |