FvH4_1g09240

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
4936369 .. 4940150
3782 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g09240.t1

Sequence Viewer

Length: 1542 bp
ATGGCTCCGGTGGTCTCAAAAGTAGGGATTATTGGTGCCGGAGTGAGCGGCATAGCTGCTGCGAAACACCTAAGCCATCACAACCCTATTGTCCTCGAAGCCTCTGACTCCATTGGAGGGGTCTGGAGGCATTGCTCCTACAACTCCACAAAGCTTCAGTCGCATCGTCGCGATTATGAGTTCTCTGACTTTCCCTGGTTCGATAGGGACAAACCTGAATATCCTTCTCACCTTGAGATATTGGATTACTTGAACTCTTACGCAGAGCACTTTGATGTGCTCAAGTTTGTGAGGTTCAACTCCAAGGTCGTCGAGGTTCGTTTTATTGGTGACCGGGAAACCACTGATGCAGGTTTTAAACCACCGGCGGGGCAGCCTGCTTGGGAAGTTGCTGTGCAGACCAGTGGTGAAGACACCATTCAGTGGTACGCCTTCGAGTTCCTTGTGGTATGTATTGGGAAATATGGTGACATACCCAGAATCCCTGAGTTTCCACACAACAAAGGCCCTCAAGCGTTTCAAGGTCAGGTTCTGCATTCTCTTGATTACTGCAAACTAGACAAGGAAGCTGCTTCTGAGTTACTCAAGGATAAGAAGGTCGTCGTAGTTGGATACAAGAAATCAGCCCTTGATTTAGCTGTGGAGTGTGCTGAGGCAAATCAAGGACCAAAAGGGCAACCATGCACAATGGTGGTGAGGACTCTACACTGGACAGTTCCCCATTACTGGGTTTGGGGTTTGCCATTTTTCTTGTTCTATTCAACAAGGGCGTCACAGTTTCTCCATCCAAGACCTAATCAGAGTTTCATCAGGACCATCACCTGCCTTCTAGCTTTATCTCCTTTGAGGCATGCAATTTCAAAGTTCATAGAATCATACATCCTGTGGAAGCTTCCCTTGGAGAAGTATGGACTAAAACCAGATCACTCTTTTGAGGAAGACTATGCTTCATGCCAGATGGCTATCACACCTGAGAACTTGTTCTCCGAGGCTGATAAGGGAAGGATCATGTTCAAGAGATCACAAGGAAATTGGTGGTTCAATAACGATGGAATTGAGTTTGATGACGGCAGTAAGATCGACGCTGATGTTGTGGTCCTTGCAACTGGTTATGATGGTAAGAAGAAGCTCAAAGCCATATTGCCAGATCCCTTCAGAAGCTTGTTGGAATACCCTTCTGGTATTATGCCCTTATACAGGGGTACAATTCATCCTTTGATCCCAAACATGGCGTTTGTGGGTTATTTGGAGAGTGTTTCGAACCTGCATTCGTCTGAGTTGCGCAGCATATGGCTGGCTCGACTTATAGATAATAAGTTTAAGCTCCCAAGTGTGGAGAAAATGCTGGAGCAGACAACTAAAGAGCTGGAAGTGATGAAGGACACCACCAGGTTCTACAAGAGGTTCTGCATCTCTACTTTTAGCATCAACCACAGTGATGAAATTTGTGAGGAGATGGGATGGACATCTTGGAGGAAGAATACCTGGTTAGCAGAGGCATTTAGCCCTTATGGGGGTCAAGACTATCTGCAGAAATACTGA

Protein Analysis

514

Amino Acids

58.7

Weight (kDa)

6.51

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 7 - 487 4.9e-39 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 830
Acc16I TGCGCA 1 cut(s) 1283
Acc36I ACCTGC 3 cut(s) 341, 830, 1272
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 423
AccBSI CCGCTC 1 cut(s) 48
AccII CGCG 1 cut(s) 171
AciI CCGC 2 cut(s) 48, 368
AclWI GGATC 3 cut(s) 1013, 1142, 1213
AcsI RAATTY 1 cut(s) 1443
AcuI CTGAAG 2 cut(s) 140, 1138
AcyI GRCGYC 1 cut(s) 770
AfaI GTAC 2 cut(s) 428, 1204
AgsI TTSAA 7 cut(s) 253, 298, 521, 762, 861, 1015, 1042
AjnI CCWGG 3 cut(s) 194, 1388, 1484
AjuI GAANNNNNNNTTGG 2 cut(s) 881, 913
AleI CACNNNNGTG 1 cut(s) 689
AloI GAACNNNNNNTCC 2 cut(s) 968, 1000
Alw21I GWGCWC 2 cut(s) 270, 282
Alw26I GTCTC 1 cut(s) 19
AlwI GGATC 3 cut(s) 1013, 1142, 1213
AlwNI CAGNNNCTG 1 cut(s) 532
AoxI GGCC 1 cut(s) 505
ApeKI GCWGC 5 cut(s) 56, 59, 373, 569, 1284
ApoI RAATTY 1 cut(s) 1443
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
Asp700I GAANNNNTTC 1 cut(s) 980
AspLEI GCGC 1 cut(s) 1284
AspS9I GGNCC 4 cut(s) 506, 665, 813, 1096
AsuC2I CCSGG 1 cut(s) 335
AsuHPI GGTGA 6 cut(s) 221, 341, 419, 479, 706, 811
AsuII TTCGAA 1 cut(s) 1259
AvaII GGWCC 3 cut(s) 665, 813, 1096
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 2 cut(s) 417, 945
Bbv12I GWGCWC 2 cut(s) 270, 282
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 5 cut(s) 43, 46, 385, 556, 1296
BccI CCATC 8 cut(s) 84, 792, 824, 952, 1043, 1109, 1450, 1455
BceAI ACGGC 1 cut(s) 1084
BcgI CGANNNNNNTGC 2 cut(s) 1060, 1094
BciT130I CCWGG 3 cut(s) 196, 1390, 1486
BciVI GTATCC 1 cut(s) 605
BcnI CCSGG 1 cut(s) 335
BcoDI GTCTC 1 cut(s) 19
BfaI CTAG 2 cut(s) 557, 830
BfmI CTRYAG 1 cut(s) 1529
BfuAI ACCTGC 3 cut(s) 341, 830, 1272
BfuI GTATCC 1 cut(s) 605
BisI GCNGC 6 cut(s) 49, 57, 60, 374, 570, 1285
BlsI GCNGC 6 cut(s) 50, 58, 61, 375, 571, 1286
Bme1390I CCNGG 4 cut(s) 196, 335, 1390, 1486
Bme18I GGWCC 3 cut(s) 665, 813, 1096
BmgT120I GGNCC 4 cut(s) 506, 665, 813, 1096
BmiI GGNNCC 2 cut(s) 6, 37
BmrFI CCNGG 4 cut(s) 196, 335, 1390, 1486
BmrI ACTGGG 1 cut(s) 736
BmsI GCATC 4 cut(s) 172, 337, 1419, 1434
BmuI ACTGGG 1 cut(s) 736
BpiI GAAGAC 2 cut(s) 417, 945
BpmI CTGGAG 2 cut(s) 145, 1367
Bpu10I CCTNAGC 2 cut(s) 71, 651
Bpu14I TTCGAA 1 cut(s) 1259
BpuEI CTTGAG 4 cut(s) 254, 266, 495, 569
BpuMI CCSGG 1 cut(s) 335
BsaBI GATNNNNATC 2 cut(s) 962, 1465
BsaHI GRCGYC 1 cut(s) 770
BsaI GGTCTC 1 cut(s) 19
BsaJI CCNNGG 4 cut(s) 194, 303, 897, 987
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 4 cut(s) 765, 795, 968, 998
Bse118I RCCGGY 1 cut(s) 364
Bse1I ACTGG 4 cut(s) 402, 713, 731, 1111
Bse3DI GCAATG 1 cut(s) 130
Bse8I GATNNNNATC 2 cut(s) 962, 1465
BseBI CCWGG 3 cut(s) 196, 1390, 1486
BseDI CCNNGG 4 cut(s) 194, 303, 897, 987
BseGI GGATG 4 cut(s) 784, 879, 1210, 1466
BseJI GATNNNNATC 2 cut(s) 962, 1465
BseMI GCAATG 1 cut(s) 130
BseMII CTCAG 5 cut(s) 477, 567, 642, 963, 1266
BseNI ACTGG 4 cut(s) 402, 713, 731, 1111
BseRI GAGGAG 1 cut(s) 1466
BseXI GCAGC 5 cut(s) 43, 46, 385, 556, 1296
BsgI GTGCAG 1 cut(s) 416
Bsh1236I CGCG 1 cut(s) 171
BshFI GGCC 1 cut(s) 507
BshNI GGYRCC 1 cut(s) 35
BsiHKAI GWGCWC 2 cut(s) 270, 282
BsiSI CCGG 4 cut(s) 8, 39, 334, 365
BslFI GGGAC 1 cut(s) 221
BsmAI GTCTC 1 cut(s) 19
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 2 cut(s) 535, 1267
BsnI GGCC 1 cut(s) 507
Bso31I GGTCTC 1 cut(s) 19
Bsp119I TTCGAA 1 cut(s) 1259
Bsp1286I GDGCHC 2 cut(s) 270, 282
Bsp143I GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
Bsp68I TCGCGA 1 cut(s) 171
BspACI CCGC 2 cut(s) 48, 368
BspANI GGCC 1 cut(s) 507
BspCNI CTCAG 5 cut(s) 478, 568, 643, 964, 1267
BspFNI CGCG 1 cut(s) 171
BspLI GGNNCC 2 cut(s) 6, 37
BspMAI CTGCAG 1 cut(s) 1533
BspMI ACCTGC 3 cut(s) 341, 830, 1272
BspPI GGATC 3 cut(s) 1013, 1142, 1213
BspT104I TTCGAA 1 cut(s) 1259
BspT107I GGYRCC 1 cut(s) 35
BspTNI GGTCTC 1 cut(s) 19
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 364
BsrI ACTGG 4 cut(s) 402, 713, 731, 1111
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 4 cut(s) 194, 303, 897, 987
BssMI GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
BssNI GRCGYC 1 cut(s) 770
BssT1I CCWWGG 2 cut(s) 303, 897
Bst2UI CCWGG 3 cut(s) 196, 1390, 1486
Bst4CI ACNGT 3 cut(s) 715, 777, 1436
BstACI GRCGYC 1 cut(s) 770
BstBI TTCGAA 1 cut(s) 1259
BstC8I GCNNGC 3 cut(s) 378, 852, 1296
BstDEI CTNAG 6 cut(s) 71, 486, 576, 651, 972, 1275
BstEII GGTNACC 1 cut(s) 329
BstENI CCTNNNNNAGG 1 cut(s) 1195
BstF5I GGATG 4 cut(s) 784, 879, 1210, 1466
BstFNI CGCG 1 cut(s) 171
BstHHI GCGC 1 cut(s) 1284
BstKTI GATC 6 cut(s) 925, 1008, 1022, 1080, 1150, 1221
BstMAI GTCTC 1 cut(s) 19
BstMBI GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstNI CCWGG 3 cut(s) 196, 1390, 1486
BstNSI RCATGY 1 cut(s) 854
BstPI GGTNACC 1 cut(s) 329
BstSCI CCNGG 4 cut(s) 194, 333, 1388, 1484
BstSFI CTRYAG 1 cut(s) 1529
BstUI CGCG 1 cut(s) 171
BstV1I GCAGC 5 cut(s) 43, 46, 385, 556, 1296
BstV2I GAAGAC 2 cut(s) 417, 945
BstX2I RGATCY 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 605
BsuRI GGCC 1 cut(s) 507
BtsCI GGATG 4 cut(s) 784, 879, 1210, 1466
BtsIMutI CAGTG 5 cut(s) 342, 409, 428, 706, 1441
BtuMI TCGCGA 1 cut(s) 171
BveI ACCTGC 3 cut(s) 341, 830, 1272
Cac8I GCNNGC 3 cut(s) 378, 852, 1296
CaiI CAGNNNCTG 1 cut(s) 532
CfoI GCGC 1 cut(s) 1284
Cfr10I RCCGGY 1 cut(s) 364
Cfr13I GGNCC 4 cut(s) 506, 665, 813, 1096
CseI GACGC 2 cut(s) 759, 1091
CsiI ACCWGGT 2 cut(s) 1388, 1484
Csp6I GTAC 2 cut(s) 427, 1203
CviAII CATG 5 cut(s) 681, 851, 951, 1009, 1228
CviQI GTAC 2 cut(s) 427, 1203
DdeI CTNAG 6 cut(s) 71, 486, 576, 651, 972, 1275
DpnI GATC 6 cut(s) 924, 1007, 1021, 1079, 1149, 1220
DpnII GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
DraI TTTAAA 1 cut(s) 358
Eco130I CCWWGG 2 cut(s) 303, 897
Eco31I GGTCTC 1 cut(s) 19
Eco47I GGWCC 3 cut(s) 665, 813, 1096
Eco57I CTGAAG 2 cut(s) 140, 1138
Eco91I GGTNACC 1 cut(s) 329
EcoNI CCTNNNNNAGG 1 cut(s) 1195
EcoO109I RGGNCCY 1 cut(s) 506
EcoO65I GGTNACC 1 cut(s) 329
EcoRII CCWGG 3 cut(s) 194, 1388, 1484
EcoT14I CCWWGG 2 cut(s) 303, 897
ErhI CCWWGG 2 cut(s) 303, 897
FaeI CATG 5 cut(s) 684, 854, 954, 1012, 1231
FalI AAGNNNNNCTT 2 cut(s) 881, 913
FaqI GGGAC 1 cut(s) 221
FatI CATG 5 cut(s) 680, 850, 950, 1008, 1227
FauI CCCGC 1 cut(s) 361
FauNDI CATATG 1 cut(s) 1289
Fnu4HI GCNGC 6 cut(s) 49, 57, 60, 374, 570, 1285
FokI GGATG 4 cut(s) 771, 866, 1197, 1473
Fsp4HI GCNGC 6 cut(s) 49, 57, 60, 374, 570, 1285
FspBI CTAG 2 cut(s) 557, 830
FspI TGCGCA 1 cut(s) 1283
GlaI GCGC 1 cut(s) 1283
GluI GCNGC 6 cut(s) 49, 57, 60, 374, 570, 1285
GsuI CTGGAG 2 cut(s) 145, 1367
HaeIII GGCC 1 cut(s) 507
HapII CCGG 4 cut(s) 8, 39, 334, 365
HgaI GACGC 2 cut(s) 759, 1091
HhaI GCGC 1 cut(s) 1284
Hin1I GRCGYC 1 cut(s) 770
Hin1II CATG 5 cut(s) 684, 854, 954, 1012, 1231
Hin6I GCGC 1 cut(s) 1282
HinP1I GCGC 1 cut(s) 1282
HindIII AAGCTT 3 cut(s) 152, 890, 1159
HinfI GANTC 4 cut(s) 107, 480, 700, 872
HpaII CCGG 4 cut(s) 8, 39, 334, 365
HphI GGTGA 6 cut(s) 221, 341, 419, 479, 706, 811
Hpy188I TCNGA 7 cut(s) 106, 187, 577, 801, 988, 1157, 1276
Hpy188III TCNNGA 6 cut(s) 124, 170, 542, 811, 1015, 1520
Hpy99I CGWCG 4 cut(s) 171, 314, 605, 1085
HpyAV CCTTC 8 cut(s) 234, 442, 589, 836, 996, 1162, 1185, 1372
HpyCH4III ACNGT 3 cut(s) 715, 777, 1436
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 6 cut(s) 71, 486, 576, 651, 972, 1275
Hsp92I GRCGYC 1 cut(s) 770
Hsp92II CATG 5 cut(s) 684, 854, 954, 1012, 1231
HspAI GCGC 1 cut(s) 1282
Kzo9I GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
LmnI GCTCC 4 cut(s) 10, 140, 1329, 1348
Lsp1109I GCAGC 5 cut(s) 43, 46, 385, 556, 1296
LweI GCATC 4 cut(s) 172, 337, 1419, 1434
MabI ACCWGGT 2 cut(s) 1388, 1484
MaeI CTAG 2 cut(s) 557, 830
MaeIII GTNAC 4 cut(s) 329, 467, 579, 771
MalI GATC 6 cut(s) 924, 1007, 1021, 1079, 1149, 1220
MbiI CCGCTC 1 cut(s) 48
MboI GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
MboII GAAGA 4 cut(s) 422, 950, 1135, 1489
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 2 cut(s) 270, 282
MluCI AATT 5 cut(s) 855, 1030, 1053, 1206, 1443
MlyI GAGTC 2 cut(s) 101, 694
MmeI TCCRAC 2 cut(s) 589, 1146
MroXI GAANNNNTTC 1 cut(s) 980
MseI TTAA 2 cut(s) 357, 1320
MslI CAYNNNNRTG 3 cut(s) 273, 689, 1437
MspI CCGG 4 cut(s) 8, 39, 334, 365
MspR9I CCNGG 4 cut(s) 196, 335, 1390, 1486
Mva1269I GAATGC 2 cut(s) 535, 1267
MvaI CCWGG 3 cut(s) 196, 1390, 1486
MvnI CGCG 1 cut(s) 171
MwoI GCNNNNNNNGC 1 cut(s) 160
NciI CCSGG 1 cut(s) 335
NdeI CATATG 1 cut(s) 1289
NdeII GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
NlaIII CATG 5 cut(s) 684, 854, 954, 1012, 1231
NlaIV GGNNCC 2 cut(s) 6, 37
NmuCI GTSAC 3 cut(s) 329, 467, 771
NruI TCGCGA 1 cut(s) 171
NsbI TGCGCA 1 cut(s) 1283
NspI RCATGY 1 cut(s) 854
NspV TTCGAA 1 cut(s) 1259
OliI CACNNNNGTG 1 cut(s) 689
PaeI GCATGC 1 cut(s) 854
PaqCI CACCTGC 1 cut(s) 830
PctI GAATGC 2 cut(s) 535, 1267
PdmI GAANNNNTTC 1 cut(s) 980
PfeI GAWTC 2 cut(s) 480, 872
PflMI CCANNNNNTGG 1 cut(s) 423
PkrI GCNGC 6 cut(s) 50, 58, 61, 375, 571, 1286
PleI GAGTC 2 cut(s) 101, 694
PpsI GAGTC 2 cut(s) 101, 694
Psp6I CCWGG 3 cut(s) 194, 1388, 1484
PspEI GGTNACC 1 cut(s) 329
PspGI CCWGG 3 cut(s) 194, 1388, 1484
PspN4I GGNNCC 2 cut(s) 6, 37
PspPI GGNCC 4 cut(s) 506, 665, 813, 1096
PstI CTGCAG 1 cut(s) 1533
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 1 cut(s) 1147
RruI TCGCGA 1 cut(s) 171
RsaI GTAC 2 cut(s) 428, 1204
RsaNI GTAC 2 cut(s) 427, 1203
RseI CAYNNNNRTG 3 cut(s) 273, 689, 1437
SaqAI TTAA 2 cut(s) 357, 1320
SatI GCNGC 6 cut(s) 49, 57, 60, 374, 570, 1285
Sau3AI GATC 6 cut(s) 922, 1005, 1019, 1077, 1147, 1218
Sau96I GGNCC 4 cut(s) 506, 665, 813, 1096
SchI GAGTC 2 cut(s) 101, 694
ScrFI CCNGG 4 cut(s) 196, 335, 1390, 1486
SduI GDGCHC 2 cut(s) 270, 282
SexAI ACCWGGT 2 cut(s) 1388, 1484
SfaNI GCATC 4 cut(s) 172, 337, 1419, 1434
SfcI CTRYAG 1 cut(s) 1529
SfuI TTCGAA 1 cut(s) 1259
SgrAI CRCCGGYG 1 cut(s) 364
SinI GGWCC 3 cut(s) 665, 813, 1096
SmiMI CAYNNNNRTG 3 cut(s) 273, 689, 1437
SmlI CTYRAG 4 cut(s) 233, 281, 510, 584
SmoI CTYRAG 4 cut(s) 233, 281, 510, 584
SphI GCATGC 1 cut(s) 854
Sse9I AATT 5 cut(s) 855, 1030, 1053, 1206, 1443
SsiI CCGC 2 cut(s) 48, 368
SspMI CTAG 2 cut(s) 557, 830
StyD4I CCNGG 4 cut(s) 194, 333, 1388, 1484
StyI CCWWGG 2 cut(s) 303, 897
TaaI ACNGT 3 cut(s) 715, 777, 1436
TaqI TCGA 7 cut(s) 96, 201, 312, 435, 1080, 1259, 1300
TasI AATT 5 cut(s) 855, 1030, 1053, 1206, 1443
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 2 cut(s) 480, 872
Tru1I TTAA 2 cut(s) 357, 1320
Tru9I TTAA 2 cut(s) 357, 1320
TscAI CASTG 5 cut(s) 349, 409, 428, 713, 1441
TseFI GTSAC 3 cut(s) 329, 467, 771
TseI GCWGC 5 cut(s) 56, 59, 373, 569, 1284
Tsp45I GTSAC 3 cut(s) 329, 467, 771
TspDTI ATGAA 6 cut(s) 796, 856, 939, 1199, 1391, 1455
TspRI CASTG 5 cut(s) 349, 409, 428, 713, 1441
Van91I CCANNNNNTGG 1 cut(s) 423
VpaK11BI GGWCC 3 cut(s) 665, 813, 1096
XagI CCTNNNNNAGG 1 cut(s) 1195
XapI RAATTY 1 cut(s) 1443
XceI RCATGY 1 cut(s) 854
XmnI GAANNNNTTC 1 cut(s) 980
XspI CTAG 2 cut(s) 557, 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.