MD15G1047200.v1.1

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0002931
Physical Location & Seq
Reverse (-)
3243658 .. 3244828
1171 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1047200.v1.1.491

Sequence Viewer

Length: 597 bp
ATGCTTCATGCCAGATGGCTATTTTACCCCAGAAATTTCTTCGCCGAGGCAGACAAGGGCAAAATATTGTTCAAAAGGTCATCAAAGTTGTGGTTTTGGAGCGGAGGAATTGAATTTGAAGACAATACCAAATTGCAGGCTGATGTTGTGCTTCTTGCAACTGGCTATGAGGGAAAGCAAAAGCTCCAATCCATATTGCCTGAGCCTTTCCGCAGCCTCATGGTTGACTCCTCTGGCACTATGCCCTTGTATAGGGGTACGATTCATCCATTGATTCCCAATATGGCATTTGTGGGATTCGTAGAGAGTGTTTCTAACCTGCAGACAGCAGAGTTGAGGTGCAAATGGCTAGGAAGATTGGTTGACAACAAATTCAAGCTTCCCACTGTCCAAAAAATGCTTGAACAGATAGGCAGAGAGATTGAAGTGATGAAGAAGACGACCCGATTTTACAAGAGGCACTGCATTTCAACTTTCAGTATCAACCACAGCGACGACATTTGTGAAGAGATGGGATGGAAATCTTGGCGGAAAAGTAACTGGCTTTCAGAAGCTTTTAGCCCCTATAACAGCCGAGACTACGAAGAAGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00982 ko01120 map00982 map01120
Pfam Domains
Protein Families
FMO-like

Protein Analysis

199

Amino Acids

23.24

Weight (kDa)

8.69

Isoelectric Point (pI)

59.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 37 - 174 1.6e-08 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 327
AccBSI CCGCTC 1 cut(s) 102
AciI CCGC 3 cut(s) 102, 211, 529
AcsI RAATTY 3 cut(s) 34, 113, 371
AfaI GTAC 1 cut(s) 259
AfiI CCNNNNNNNGG 1 cut(s) 252
AgsI TTSAA 7 cut(s) 73, 113, 119, 376, 404, 425, 471
AluBI AGCT 3 cut(s) 184, 379, 554
AluI AGCT 3 cut(s) 184, 379, 554
Alw26I GTCTC 1 cut(s) 570
ApeKI GCWGC 1 cut(s) 213
ApoI RAATTY 3 cut(s) 34, 113, 371
BbsI GAAGAC 2 cut(s) 126, 443
BbvI GCAGC 1 cut(s) 225
BccI CCATC 3 cut(s) 9, 505, 510
BcoDI GTCTC 1 cut(s) 570
BfaI CTAG 1 cut(s) 350
BfmI CTRYAG 1 cut(s) 320
BfuAI ACCTGC 1 cut(s) 327
BisI GCNGC 1 cut(s) 214
BlsI GCNGC 1 cut(s) 215
BpiI GAAGAC 2 cut(s) 126, 443
Bpu10I CCTNAGC 1 cut(s) 201
BsaBI GATNNNNATC 1 cut(s) 520
BsaJI CCNNGG 1 cut(s) 45
Bsc4I CCNNNNNNNGG 1 cut(s) 252
Bse1I ACTGG 2 cut(s) 166, 545
Bse8I GATNNNNATC 1 cut(s) 520
BseDI CCNNGG 1 cut(s) 45
BseGI GGATG 2 cut(s) 265, 521
BseJI GATNNNNATC 1 cut(s) 520
BseLI CCNNNNNNNGG 1 cut(s) 252
BseMII CTCAG 1 cut(s) 192
BseNI ACTGG 2 cut(s) 166, 545
BseRI GAGGAG 1 cut(s) 220
BseXI GCAGC 1 cut(s) 225
BslI CCNNNNNNNGG 1 cut(s) 252
BsmAI GTCTC 1 cut(s) 570
BspACI CCGC 3 cut(s) 102, 211, 529
BspCNI CTCAG 1 cut(s) 193
BspMAI CTGCAG 1 cut(s) 324
BspMI ACCTGC 1 cut(s) 327
BsrBI CCGCTC 1 cut(s) 102
BsrI ACTGG 2 cut(s) 166, 545
BssECI CCNNGG 1 cut(s) 45
Bst4CI ACNGT 1 cut(s) 388
Bst6I CTCTTC 1 cut(s) 501
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 1 cut(s) 201
BstENI CCTNNNNNAGG 1 cut(s) 250
BstF5I GGATG 2 cut(s) 265, 521
BstMAI GTCTC 1 cut(s) 570
BstSFI CTRYAG 1 cut(s) 320
BstV1I GCAGC 1 cut(s) 225
BstV2I GAAGAC 2 cut(s) 126, 443
BtsCI GGATG 2 cut(s) 265, 521
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 2 cut(s) 384, 460
BveI ACCTGC 1 cut(s) 327
Cac8I GCNNGC 1 cut(s) 138
Csp6I GTAC 1 cut(s) 258
CviAII CATG 2 cut(s) 8, 220
CviQI GTAC 1 cut(s) 258
DdeI CTNAG 1 cut(s) 201
Eam1104I CTCTTC 1 cut(s) 501
EarI CTCTTC 1 cut(s) 501
EciI GGCGGA 1 cut(s) 544
EcoNI CCTNNNNNAGG 1 cut(s) 250
FaeI CATG 2 cut(s) 11, 223
FaiI YATR 8 cut(s) 9, 168, 194, 221, 242, 252, 284, 567
FatI CATG 2 cut(s) 7, 219
Fnu4HI GCNGC 1 cut(s) 214
FokI GGATG 2 cut(s) 252, 528
Fsp4HI GCNGC 1 cut(s) 214
FspBI CTAG 1 cut(s) 350
GluI GCNGC 1 cut(s) 214
Hin1II CATG 2 cut(s) 11, 223
HincII GTYRAC 2 cut(s) 226, 364
HindII GTYRAC 2 cut(s) 226, 364
HindIII AAGCTT 2 cut(s) 377, 552
HinfI GANTC 4 cut(s) 227, 262, 274, 297
Hpy166II GTNNAC 2 cut(s) 226, 364
Hpy188I TCNGA 1 cut(s) 550
Hpy8I GTNNAC 2 cut(s) 226, 364
Hpy99I CGWCG 1 cut(s) 497
HpyCH4III ACNGT 1 cut(s) 388
HpyCH4V TGCA 5 cut(s) 136, 158, 322, 342, 465
HpyF3I CTNAG 1 cut(s) 201
Hsp92II CATG 2 cut(s) 11, 223
LmnI GCTCC 2 cut(s) 99, 189
LpnPI CCDG 8 cut(s) 25, 43, 122, 147, 213, 219, 332, 526
Lsp1109I GCAGC 1 cut(s) 225
MaeI CTAG 1 cut(s) 350
MaeIII GTNAC 1 cut(s) 536
MbiI CCGCTC 1 cut(s) 102
MboII GAAGA 7 cut(s) 31, 131, 366, 445, 448, 518, 596
MluCI AATT 5 cut(s) 34, 108, 113, 131, 371
MlyI GAGTC 1 cut(s) 221
MnlI CCTC 7 cut(s) 40, 98, 163, 227, 241, 330, 450
MseI TTAA 1 cut(s) 595
NlaIII CATG 2 cut(s) 11, 223
NmeAIII GCCGAG 1 cut(s) 70
PfeI GAWTC 3 cut(s) 262, 274, 297
PkrI GCNGC 1 cut(s) 215
PleI GAGTC 1 cut(s) 221
PpsI GAGTC 1 cut(s) 221
PstI CTGCAG 1 cut(s) 324
RsaI GTAC 1 cut(s) 259
RsaNI GTAC 1 cut(s) 258
SaqAI TTAA 1 cut(s) 595
SatI GCNGC 1 cut(s) 214
SchI GAGTC 1 cut(s) 221
SetI ASST 6 cut(s) 80, 186, 321, 341, 381, 556
SfcI CTRYAG 1 cut(s) 320
Sse9I AATT 5 cut(s) 34, 108, 113, 131, 371
SsiI CCGC 3 cut(s) 102, 211, 529
SspI AATATT 1 cut(s) 66
SspMI CTAG 1 cut(s) 350
TaaI ACNGT 1 cut(s) 388
TasI AATT 5 cut(s) 34, 108, 113, 131, 371
TfiI GAWTC 3 cut(s) 262, 274, 297
Tru1I TTAA 1 cut(s) 595
Tru9I TTAA 1 cut(s) 595
TscAI CASTG 2 cut(s) 391, 467
TseI GCWGC 1 cut(s) 213
TspDTI ATGAA 2 cut(s) 254, 446
TspRI CASTG 2 cut(s) 391, 467
XagI CCTNNNNNAGG 1 cut(s) 250
XapI RAATTY 3 cut(s) 34, 113, 371
XspI CTAG 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.