FvH4_2g37000

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
27005943 .. 27008840
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37000.t1

Sequence Viewer

Length: 1611 bp
ATGGCTGCGCAACATCTTAACCAATTCCAGTTTCACTCAGTCTCCAAAATCGGCATCATCGGAGCTGGTATTAGCGGAATCGCTGCCGCTAAACAGCTTTCAGGTCACAGTCCGGTGGTGTTTGAGGCCACTGACTCGATCGGGGGAGTTTGGAAACACTGCTCTTATGCTTCCACCAAACTCCAAACCCCTCGTTGCGATTTTGAGTTCTCTGACTATCCTTGGTCTGAGAGAGACAATGCAAACTTCCCTTCTCATGTTGAGGTCTTGGAATACTTGCATGGCTATGCCACACACTTTGACCTCTTGAAGTTTGTCAAGTTTGGTTCAAAGGTTGTGGAAATACGCTATGTAGGTGATGATCACAGTACCACTACCAGTACTCATTCATCTGAAAATTATACATCCGGGGAATATGGGAATCTTTTGGCCGGCCACCCTGTCTGGGTGGTCGGAGTTCAAAGCTCCAACAATCCAGACAGTACCATCGAGTGGTATGGATTCGAGTTCATTGTGGTGTGCATCGGGAAATATGGAGACATACCAAGAATACCAACCTTCCCTCGCAACAAAGGTCAAGAAGTGTTCAAAGGAAAAGTCATGCACTCCATGGACTACTCTAAGCTAGACCAAGAAGCTGCGCGTGAGCTCGTCAAGGGCAAGAAGGTTGCAGTCATTGGCTACAAGAAGTCCGCCATTGATTTAGCACTCGAGTGTGCTGAGGCTAACCAAGGACCAGATGGGCAACCATGCACAATGGTGGTGAGAACTTTGCATTGGACTGTTCCATCATATTGGATTTGGGGACTTCCATTTTTTTTGTTTTACTCAACAAGGTCTTCTCAATTCGTCCATGAAAGGCCAAACCAGAGCTTCCTCAAAGCCCTCTTCTGCCTATTTTCATCCCCAATGAGAAAGGTGGTTTCCAAGTTCATAGAGTCATACTTGCTGTGGAAGCTTCCTCTAGTGAAGTATGGCCTAAAACCAGAGCACCCATTTTTGGAGGACTATGCGTCTTGCCAGATGGCTATTTTGCCTGATAACTTCTTTCCCGAGGCGGACAAGGGTAACTTAAAGTTCAAAAGAGCATCAAAGTGGTGGTTTTATGATGGTGGAGTTGAATTTGAAGACAACACCAGATTGGAGGCTGATGTTGTTGTTCTTGCTACTGGTTATGATGGAAAGAAGAAACTACAATCTGTATTACCTGAGCCTTTCCGCAGTCTCATGCTCGACTCTTCTGGCACTATGCCCTTATACAGGGGTACAATCCATCCATTGATTCCCAACATGGCATTTGTGGGTTTCATAGAGAGCGTTTCGAATCTGCACACAGCAGAGTTGAGGTGCAAATGGCTATCAAGAGTCGTTGACAACAAGTTCAAGCTTCCGAGTGTGAAAGAAATGCTTGATCAGATAAGCAGAGAGATGGCAGTGATGAAGAGGACGACGAGGTTTTACAAGAGACACTGCATTTCTACTTTCAGCATCAACCACAGTGATGAGATTTGCGAAGAAATGGGGTGGAAGTCTTGGAGGAAGAGCAACTGGCTTTCAGAGGCTTTTAGCCCTTATAACAGCCGAGACTATAATGAAGAGAAGGAGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

61.19

Weight (kDa)

7.27

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 16 - 123 1.1e-14 Flavin-binding monooxygenase-like
NAD_binding_8 PF13450 19 - 55 8.4e-06 NAD(P)-binding Rossmann-like domain
FMO-like PF00743 168 - 510 1.7e-20 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1575
Acc16I TGCGCA 1 cut(s) 9
AccB7I CCANNNNNTGG 1 cut(s) 492
AccII CGCG 1 cut(s) 643
AciI CCGC 5 cut(s) 75, 87, 693, 1058, 1219
AcoI YGGCCR 2 cut(s) 429, 433
AcsI RAATTY 1 cut(s) 1121
AfaI GTAC 4 cut(s) 370, 382, 484, 1267
AfiI CCNNNNNNNGG 4 cut(s) 445, 492, 1000, 1260
AgsI TTSAA 8 cut(s) 310, 330, 461, 589, 1081, 1121, 1127, 1384
AhdI GACNNNNNGTC 1 cut(s) 1012
AjuI GAANNNNNNNTTGG 4 cut(s) 15, 47, 760, 792
AleI CACNNNNGTG 2 cut(s) 712, 758
AluBI AGCT 9 cut(s) 65, 97, 465, 625, 638, 649, 873, 958, 1387
AluI AGCT 9 cut(s) 65, 97, 465, 625, 638, 649, 873, 958, 1387
Alw21I GWGCWC 2 cut(s) 651, 993
Alw26I GTCTC 6 cut(s) 46, 228, 531, 1229, 1459, 1578
Ama87I CYCGRG 2 cut(s) 710, 1052
AoxI GGCC 5 cut(s) 126, 429, 433, 860, 976
ApeKI GCWGC 3 cut(s) 5, 83, 638
ApoI RAATTY 1 cut(s) 1121
ArsI GACNNNNNNTTYG 2 cut(s) 582, 614
AspLEI GCGC 2 cut(s) 10, 643
AspS9I GGNCC 1 cut(s) 734
AsuC2I CCSGG 1 cut(s) 409
AsuHPI GGTGA 2 cut(s) 368, 775
AsuII TTCGAA 1 cut(s) 1322
AvaI CYCGRG 2 cut(s) 710, 1052
AvaII GGWCC 1 cut(s) 734
BanII GRGCYC 1 cut(s) 651
BbsI GAAGAC 2 cut(s) 831, 1134
Bbv12I GWGCWC 2 cut(s) 651, 993
BbvCI CCTCAGC 1 cut(s) 720
BbvI GCAGC 2 cut(s) 70, 625
BccI CCATC 8 cut(s) 494, 734, 796, 1018, 1103, 1172, 1281, 1423
BclI TGATCA 2 cut(s) 361, 1411
BcnI CCSGG 1 cut(s) 409
BcoDI GTCTC 6 cut(s) 46, 228, 531, 1229, 1459, 1578
BfaI CTAG 2 cut(s) 626, 965
BisI GCNGC 4 cut(s) 6, 84, 87, 639
BlsI GCNGC 4 cut(s) 7, 85, 88, 640
BmcAI AGTACT 1 cut(s) 382
Bme1390I CCNGG 1 cut(s) 409
Bme18I GGWCC 1 cut(s) 734
BmeRI GACNNNNNGTC 1 cut(s) 1012
BmeT110I CYCGRG 2 cut(s) 710, 1052
BmgT120I GGNCC 1 cut(s) 734
BmrFI CCNGG 1 cut(s) 409
BmsI GCATC 4 cut(s) 63, 531, 1097, 1497
BpiI GAAGAC 2 cut(s) 831, 1134
Bpu10I CCTNAGC 2 cut(s) 720, 1209
Bpu14I TTCGAA 1 cut(s) 1322
BpuMI CCSGG 1 cut(s) 409
BsaJI CCNNGG 5 cut(s) 221, 408, 609, 730, 1053
BsaWI WCCGGW 1 cut(s) 112
BsaXI ACNNNNNCTCC 2 cut(s) 26, 56
Bsc4I CCNNNNNNNGG 4 cut(s) 445, 492, 1000, 1260
Bse118I RCCGGY 1 cut(s) 431
Bse1I ACTGG 4 cut(s) 28, 378, 1174, 1553
BseDI CCNNGG 5 cut(s) 221, 408, 609, 730, 1053
BseGI GGATG 3 cut(s) 404, 902, 1273
BseLI CCNNNNNNNGG 4 cut(s) 445, 492, 1000, 1260
BseMII CTCAG 4 cut(s) 51, 219, 711, 1200
BseNI ACTGG 4 cut(s) 28, 378, 1174, 1553
BseXI GCAGC 2 cut(s) 70, 625
BsgI GTGCAG 1 cut(s) 1313
Bsh1236I CGCG 1 cut(s) 643
Bsh1285I CGRYCG 1 cut(s) 141
BshFI GGCC 5 cut(s) 128, 431, 435, 862, 978
BsiEI CGRYCG 1 cut(s) 141
BsiHKAI GWGCWC 2 cut(s) 651, 993
BsiHKCI CYCGRG 2 cut(s) 710, 1052
BsiSI CCGG 3 cut(s) 113, 408, 432
BslFI GGGAC 1 cut(s) 819
BslI CCNNNNNNNGG 4 cut(s) 445, 492, 1000, 1260
BsmAI GTCTC 6 cut(s) 46, 228, 531, 1229, 1459, 1578
BsmFI GGGAC 1 cut(s) 819
BsnI GGCC 5 cut(s) 128, 431, 435, 862, 978
BsoBI CYCGRG 2 cut(s) 710, 1052
Bsp119I TTCGAA 1 cut(s) 1322
Bsp1286I GDGCHC 2 cut(s) 651, 993
Bsp143I GATC 3 cut(s) 138, 361, 1411
Bsp19I CCATGG 1 cut(s) 609
BspACI CCGC 5 cut(s) 75, 87, 693, 1058, 1219
BspANI GGCC 5 cut(s) 128, 431, 435, 862, 978
BspCNI CTCAG 4 cut(s) 50, 220, 712, 1201
BspFNI CGCG 1 cut(s) 643
BspQI GCTCTTC 1 cut(s) 1535
BspT104I TTCGAA 1 cut(s) 1322
BsrFI RCCGGY 1 cut(s) 431
BsrI ACTGG 4 cut(s) 28, 378, 1174, 1553
BssAI RCCGGY 1 cut(s) 431
BssECI CCNNGG 5 cut(s) 221, 408, 609, 730, 1053
BssMI GATC 3 cut(s) 138, 361, 1411
BssT1I CCWWGG 3 cut(s) 221, 609, 730
Bst4CI ACNGT 5 cut(s) 110, 368, 482, 784, 1499
Bst6I CTCTTC 5 cut(s) 893, 1243, 1436, 1535, 1590
BstBI TTCGAA 1 cut(s) 1322
BstC8I GCNNGC 1 cut(s) 433
BstDEI CTNAG 5 cut(s) 37, 228, 621, 720, 1209
BstDSI CCRYGG 1 cut(s) 609
BstENI CCTNNNNNAGG 1 cut(s) 1258
BstF5I GGATG 3 cut(s) 404, 902, 1273
BstFNI CGCG 1 cut(s) 643
BstHHI GCGC 2 cut(s) 10, 643
BstKTI GATC 3 cut(s) 141, 364, 1414
BstMAI GTCTC 6 cut(s) 46, 228, 531, 1229, 1459, 1578
BstMBI GATC 3 cut(s) 138, 361, 1411
BstMCI CGRYCG 1 cut(s) 141
BstMWI GCNNNNNNNGC 1 cut(s) 955
BstSCI CCNGG 1 cut(s) 407
BstUI CGCG 1 cut(s) 643
BstV1I GCAGC 2 cut(s) 70, 625
BstV2I GAAGAC 2 cut(s) 831, 1134
BstXI CCANNNNNNTGG 1 cut(s) 795
BsuRI GGCC 5 cut(s) 128, 431, 435, 862, 978
BtgI CCRYGG 1 cut(s) 609
BtsCI GGATG 3 cut(s) 404, 902, 1273
BtsI GCAGTG 3 cut(s) 157, 1440, 1468
BtsIMutI CAGTG 5 cut(s) 129, 157, 1440, 1468, 1504
Cac8I GCNNGC 1 cut(s) 433
CfoI GCGC 2 cut(s) 10, 643
Cfr10I RCCGGY 1 cut(s) 431
Cfr13I GGNCC 1 cut(s) 734
CseI GACGC 1 cut(s) 1002
Csp6I GTAC 4 cut(s) 369, 381, 483, 1266
CspCI CAANNNNNGTGG 4 cut(s) 280, 315, 318, 353
CviAII CATG 8 cut(s) 257, 281, 601, 610, 750, 854, 1228, 1291
CviQI GTAC 4 cut(s) 369, 381, 483, 1266
DdeI CTNAG 5 cut(s) 37, 228, 621, 720, 1209
DpnI GATC 3 cut(s) 140, 363, 1413
DpnII GATC 3 cut(s) 138, 361, 1411
DriI GACNNNNNGTC 1 cut(s) 1012
EaeI YGGCCR 2 cut(s) 429, 433
Eam1104I CTCTTC 5 cut(s) 893, 1243, 1436, 1535, 1590
Eam1105I GACNNNNNGTC 1 cut(s) 1012
EarI CTCTTC 5 cut(s) 893, 1243, 1436, 1535, 1590
EciI GGCGGA 2 cut(s) 682, 1073
Ecl136II GAGCTC 1 cut(s) 649
Eco130I CCWWGG 3 cut(s) 221, 609, 730
Eco24I GRGCYC 1 cut(s) 651
Eco47I GGWCC 1 cut(s) 734
Eco53kI GAGCTC 1 cut(s) 649
Eco88I CYCGRG 2 cut(s) 710, 1052
EcoICRI GAGCTC 1 cut(s) 649
EcoNI CCTNNNNNAGG 1 cut(s) 1258
EcoT14I CCWWGG 3 cut(s) 221, 609, 730
EcoT38I GRGCYC 1 cut(s) 651
ErhI CCWWGG 3 cut(s) 221, 609, 730
FaeI CATG 8 cut(s) 260, 284, 604, 613, 753, 857, 1231, 1294
FalI AAGNNNNNCTT 4 cut(s) 1055, 1087, 1392, 1424
FaqI GGGAC 1 cut(s) 819
FatI CATG 8 cut(s) 256, 280, 600, 609, 749, 853, 1227, 1290
FbaI TGATCA 2 cut(s) 361, 1411
Fnu4HI GCNGC 4 cut(s) 6, 84, 87, 639
FokI GGATG 3 cut(s) 391, 889, 1260
FriOI GRGCYC 1 cut(s) 651
FseI GGCCGGCC 1 cut(s) 435
Fsp4HI GCNGC 4 cut(s) 6, 84, 87, 639
FspBI CTAG 2 cut(s) 626, 965
FspI TGCGCA 1 cut(s) 9
GlaI GCGC 2 cut(s) 9, 642
GluI GCNGC 4 cut(s) 6, 84, 87, 639
HaeIII GGCC 5 cut(s) 128, 431, 435, 862, 978
HapII CCGG 3 cut(s) 113, 408, 432
HgaI GACGC 1 cut(s) 1002
HhaI GCGC 2 cut(s) 10, 643
Hin1II CATG 8 cut(s) 260, 284, 604, 613, 753, 857, 1231, 1294
Hin6I GCGC 2 cut(s) 8, 641
HinP1I GCGC 2 cut(s) 8, 641
HincII GTYRAC 1 cut(s) 1372
HindII GTYRAC 1 cut(s) 1372
HindIII AAGCTT 2 cut(s) 956, 1385
HinfI GANTC 9 cut(s) 78, 134, 421, 501, 938, 1235, 1282, 1324, 1365
HpaII CCGG 3 cut(s) 113, 408, 432
HphI GGTGA 2 cut(s) 368, 775
Hpy166II GTNNAC 1 cut(s) 1372
Hpy188I TCNGA 8 cut(s) 62, 214, 229, 394, 455, 1392, 1416, 1558
Hpy188III TCNNGA 6 cut(s) 307, 476, 526, 578, 1052, 1362
Hpy8I GTNNAC 1 cut(s) 1372
Hpy99I CGWCG 1 cut(s) 1453
HpyAV CCTTC 4 cut(s) 261, 568, 658, 1594
HpyCH4III ACNGT 5 cut(s) 110, 368, 482, 784, 1499
HpyF10VI GCNNNNNNNGC 1 cut(s) 955
HpyF3I CTNAG 5 cut(s) 37, 228, 621, 720, 1209
Hsp92II CATG 8 cut(s) 260, 284, 604, 613, 753, 857, 1231, 1294
HspAI GCGC 2 cut(s) 8, 641
KroI GCCGGC 1 cut(s) 431
KroNI GCCGGC 1 cut(s) 433
Ksp22I TGATCA 2 cut(s) 361, 1411
Kzo9I GATC 3 cut(s) 138, 361, 1411
LguI GCTCTTC 1 cut(s) 1535
LmnI GCTCC 2 cut(s) 62, 470
Lsp1109I GCAGC 2 cut(s) 70, 625
LweI GCATC 4 cut(s) 63, 531, 1097, 1497
MaeI CTAG 2 cut(s) 626, 965
MaeIII GTNAC 2 cut(s) 104, 1067
MalI GATC 3 cut(s) 140, 363, 1413
MboI GATC 3 cut(s) 138, 361, 1411
MboII GAAGA 9 cut(s) 831, 880, 1139, 1198, 1230, 1453, 1526, 1552, 1607
MhlI GDGCHC 2 cut(s) 651, 993
MluCI AATT 4 cut(s) 23, 397, 845, 1121
MlyI GAGTC 4 cut(s) 128, 947, 1229, 1374
MmeI TCCRAC 2 cut(s) 433, 492
MroNI GCCGGC 1 cut(s) 431
MseI TTAA 3 cut(s) 18, 1073, 1609
MslI CAYNNNNRTG 6 cut(s) 285, 515, 712, 758, 1093, 1500
MspI CCGG 3 cut(s) 113, 408, 432
MspR9I CCNGG 1 cut(s) 409
MvnI CGCG 1 cut(s) 643
MwoI GCNNNNNNNGC 1 cut(s) 955
NaeI GCCGGC 1 cut(s) 433
NciI CCSGG 1 cut(s) 409
NcoI CCATGG 1 cut(s) 609
NdeII GATC 3 cut(s) 138, 361, 1411
NgoMIV GCCGGC 1 cut(s) 431
NlaIII CATG 8 cut(s) 260, 284, 604, 613, 753, 857, 1231, 1294
NmeAIII GCCGAG 1 cut(s) 1607
NmuCI GTSAC 1 cut(s) 104
NsbI TGCGCA 1 cut(s) 9
NspV TTCGAA 1 cut(s) 1322
OliI CACNNNNGTG 2 cut(s) 712, 758
PaeR7I CTCGAG 1 cut(s) 710
PciSI GCTCTTC 1 cut(s) 1535
PdiI GCCGGC 1 cut(s) 433
PfeI GAWTC 5 cut(s) 78, 421, 501, 1282, 1324
PflMI CCANNNNNTGG 1 cut(s) 492
PkrI GCNGC 4 cut(s) 7, 85, 88, 640
Ple19I CGATCG 1 cut(s) 141
PleI GAGTC 4 cut(s) 128, 946, 1229, 1373
PpsI GAGTC 4 cut(s) 128, 946, 1229, 1373
PsiI TTATAA 1 cut(s) 1575
Psp124BI GAGCTC 1 cut(s) 651
PspPI GGNCC 1 cut(s) 734
PspXI VCTCGAGB 1 cut(s) 710
PvuI CGATCG 1 cut(s) 141
RigI GGCCGGCC 1 cut(s) 435
RsaI GTAC 4 cut(s) 370, 382, 484, 1267
RsaNI GTAC 4 cut(s) 369, 381, 483, 1266
RseI CAYNNNNRTG 6 cut(s) 285, 515, 712, 758, 1093, 1500
SacI GAGCTC 1 cut(s) 651
SapI GCTCTTC 1 cut(s) 1535
SaqAI TTAA 3 cut(s) 18, 1073, 1609
SatI GCNGC 4 cut(s) 6, 84, 87, 639
Sau3AI GATC 3 cut(s) 138, 361, 1411
Sau96I GGNCC 1 cut(s) 734
ScaI AGTACT 1 cut(s) 382
SchI GAGTC 4 cut(s) 128, 947, 1229, 1374
ScrFI CCNGG 1 cut(s) 409
SduI GDGCHC 2 cut(s) 651, 993
SfaNI GCATC 4 cut(s) 63, 531, 1097, 1497
Sfr274I CTCGAG 1 cut(s) 710
SfuI TTCGAA 1 cut(s) 1322
SinI GGWCC 1 cut(s) 734
SlaI CTCGAG 1 cut(s) 710
SmiMI CAYNNNNRTG 6 cut(s) 285, 515, 712, 758, 1093, 1500
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
Sse9I AATT 4 cut(s) 23, 397, 845, 1121
SsiI CCGC 5 cut(s) 75, 87, 693, 1058, 1219
SspMI CTAG 2 cut(s) 626, 965
SstI GAGCTC 1 cut(s) 651
StyD4I CCNGG 1 cut(s) 407
StyI CCWWGG 3 cut(s) 221, 609, 730
TaaI ACNGT 5 cut(s) 110, 368, 482, 784, 1499
TaqI TCGA 6 cut(s) 137, 489, 504, 711, 1233, 1322
TasI AATT 4 cut(s) 23, 397, 845, 1121
TatI WGTACW 1 cut(s) 380
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 5 cut(s) 78, 421, 501, 1282, 1324
Tru1I TTAA 3 cut(s) 18, 1073, 1609
Tru9I TTAA 3 cut(s) 18, 1073, 1609
TscAI CASTG 5 cut(s) 136, 164, 1440, 1475, 1504
TseFI GTSAC 1 cut(s) 104
TseI GCWGC 3 cut(s) 5, 83, 638
Tsp45I GTSAC 1 cut(s) 104
TspDTI ATGAA 8 cut(s) 378, 499, 870, 891, 922, 1297, 1454, 1608
TspRI CASTG 5 cut(s) 136, 164, 1440, 1475, 1504
Van91I CCANNNNNTGG 1 cut(s) 492
VpaK11BI GGWCC 1 cut(s) 734
XagI CCTNNNNNAGG 1 cut(s) 1258
XapI RAATTY 1 cut(s) 1121
XcmI CCANNNNNNNNNTGG 1 cut(s) 737
XhoI CTCGAG 1 cut(s) 710
XspI CTAG 2 cut(s) 626, 965
ZrmI AGTACT 1 cut(s) 382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.