pycom08g03920

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0002931
Physical Location & Seq
Forward (+)
2960530 .. 2960847
318 bp
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UTR
Exon/CDS
Intron
pycom08g03920.1

Sequence Viewer

Length: 318 bp
ATGGCATTCGTGGGATTCATAGAGAGTGTTTCTAACCTGCACACAGCAGAGTTGAGATGCAAATGGTTAGGAAGATTGGTTGACAACGAATTCAAGCTTCCGACTGTCCAAAAAATGCTTGAACAGATAGGCAGAGAGATGGAAGTGATGAAGAAGACGACCCGATTTTACAAGAGGCACTGCATTTCAACTTTCAGTATCAACCACAGCGACGACATTTGTGAAGAGATGGGATGGAAATCTTGGAGGAAAAGTAACTGGCTTTCAGAAGCTTTTAGCCCCTATAACAGCCGAGACTACAAAGAAGTTGACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00982 ko01120 map00982 map01120
Pfam Domains
Protein Families
FMO-like

Protein Analysis

106

Amino Acids

12.58

Weight (kDa)

7.72

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 1 - 80 2.2e-06 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 45
AcsI RAATTY 1 cut(s) 89
AgsI TTSAA 3 cut(s) 94, 122, 189
AluBI AGCT 2 cut(s) 97, 272
AluI AGCT 2 cut(s) 97, 272
Alw26I GTCTC 1 cut(s) 288
ApoI RAATTY 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 161
BccI CCATC 3 cut(s) 133, 223, 228
BcoDI GTCTC 1 cut(s) 288
BfuAI ACCTGC 1 cut(s) 45
BmsI GCATC 1 cut(s) 47
BpiI GAAGAC 1 cut(s) 161
BsaBI GATNNNNATC 1 cut(s) 238
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bse1I ACTGG 1 cut(s) 263
Bse8I GATNNNNATC 1 cut(s) 238
BseGI GGATG 1 cut(s) 239
BseJI GATNNNNATC 1 cut(s) 238
BseNI ACTGG 1 cut(s) 263
BsgI GTGCAG 1 cut(s) 23
BsmAI GTCTC 1 cut(s) 288
BsmI GAATGC 1 cut(s) 5
BspMI ACCTGC 1 cut(s) 45
BsrI ACTGG 1 cut(s) 263
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 219
BstF5I GGATG 1 cut(s) 239
BstMAI GTCTC 1 cut(s) 288
BstV2I GAAGAC 1 cut(s) 161
BtsCI GGATG 1 cut(s) 239
BtsI GCAGTG 1 cut(s) 178
BtsIMutI CAGTG 1 cut(s) 178
BveI ACCTGC 1 cut(s) 45
CviJI RGCY 5 cut(s) 97, 262, 272, 279, 291
CviKI_1 RGCY 5 cut(s) 97, 262, 272, 279, 291
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
EcoRI GAATTC 1 cut(s) 89
FaiI YATR 2 cut(s) 20, 285
FokI GGATG 1 cut(s) 246
HincII GTYRAC 2 cut(s) 82, 310
HindII GTYRAC 2 cut(s) 82, 310
HindIII AAGCTT 2 cut(s) 95, 270
HinfI GANTC 1 cut(s) 15
Hpy166II GTNNAC 2 cut(s) 82, 310
Hpy188I TCNGA 2 cut(s) 102, 268
Hpy8I GTNNAC 2 cut(s) 82, 310
Hpy99I CGWCG 1 cut(s) 215
HpyCH4III ACNGT 1 cut(s) 106
HpyCH4V TGCA 3 cut(s) 40, 60, 183
LpnPI CCDG 2 cut(s) 50, 244
LweI GCATC 1 cut(s) 47
MaeIII GTNAC 1 cut(s) 254
MboII GAAGA 4 cut(s) 84, 163, 166, 236
MluCI AATT 1 cut(s) 89
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 2 cut(s) 168, 240
Mva1269I GAATGC 1 cut(s) 5
NmeAIII GCCGAG 1 cut(s) 317
PctI GAATGC 1 cut(s) 5
PfeI GAWTC 1 cut(s) 15
SetI ASST 3 cut(s) 39, 99, 274
SfaNI GCATC 1 cut(s) 47
SgeI CNNG 9 cut(s) 22, 49, 106, 131, 174, 184, 255, 271, 305
Sse9I AATT 1 cut(s) 89
TaaI ACNGT 1 cut(s) 106
TasI AATT 1 cut(s) 89
TfiI GAWTC 1 cut(s) 15
TscAI CASTG 1 cut(s) 185
TspDTI ATGAA 2 cut(s) 7, 164
TspRI CASTG 1 cut(s) 185
XapI RAATTY 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.