MD15G1222400.v1.1

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
18064557 .. 18067759
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1222400.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGCTCCAATAGTCTCAAAACTTGGCATCATTGGTGCCGGTGTAAGTGGCATAGCAGCAGCTAAACAACTAGCCCATTACAACCCTATTATTCTCGAGGCCTCTGACTCCATTGGAGGGGTTTGGAGGCATTGTTCTTACAGTTCCACAAAACTTCAGTCCCATCGATGTGACTATGAGTTCTCTGACTTCCCTTGGCCTGACAGGGACAACACTGAATATCCTTCTCACCTTGAGATATTGGCCTACTTGAACTCTTATGCTGAGCACTTTGATGTGCTTAAGTTTGTCAGGTTCAATTCCAAGGTGGTCGAGGTCCGGTTCATTGGTGACCGAGAAAACATTGAATTTGGTGTCAAACCTGTGGAGTATCGGAGTCTCTCGCCAGCTGGCGGTCAGCCTGTTTGGGAAGTTGCTGTCCAGACTAATGATTCAGAGACCATTCAGTGGTACGCCTTCGAGTTCATTGTGGTTTGCATAGGGAAATATGGTGATACACCCAAAATTCCAGAGTTTCCACACAACAAAGGCCCTGAAGTATTTCAAGGCCAAGCTCTTCATGCTCTTGATTACTGCAAACTGGACAAGGACGCTGCTTCTCAATTACTAAAGGATAAGAAAGTCGTTGTAGTTGGCTACAAAAAATCAGCTATTGATTTAGCTGTCGAGTGTGCGGAGGCAAACCAAGGACCAGAAGGCAAACCATGCACGATGGTAGTAAGGACTTTACATTGGACTGTTCCCCATTACTGGATTTGGGGCTTGCCGTTTTTCTTGTTCTACTCTACAAGGTCTTCACAGTTTCTCCATCAAAGACCTAACCAAACCTTCCTCAGAACCCTCCTTTGCTCTCTAATTATGTCTCCAATGAGGCATGCAGTTTCAAAATTTATTGAATCATATTTGCTGTGGAAGATGCCTTTGGAGAAGTATGGACTAAAGCCAGATCATTCATTTGAGGAGGACTATGCATCCTGCCAGATGGCTATCATGCCGGAAAATTTCTTCTCCGAGGCGGATAAGGGAAAAATTGTGTTCAAAAGATCAACATCAAAATGGTGGTTTTCTGCTGATGGAATTGAATTTGATGACAACACTAAGATAAAAGCTGATGTTGTGGTCCTTGCAACTGGTTATGATGGTAAGAAAAAACTCAAATTCATCTTACCGGACCCTTTTCGCAGCTTGTTGGAGTATCCTTCTGGTATCATACCCTTATACAGGGGAACAATTCATCCTTTGATCCCAAACATGGCTTTCGTGGGTTATCTCGAGAGTGTTTCAAATCTTCACTCTTCTGAATTGCGCAGCATATGGCTGGCCAGGCTGCTGGATAATAAATTTAAGCTTCCAAGTGTGCAGAAAATGCTTGAGCAAACAAGTAAGGAAGTGGAAATCTCAAAGAAAACAACCAGGTTCTACAGGAGGCATTGCATTTCTACTTTTAGCATCAACCACAGCGACGAAATTTGCGAGGAGATGGGATGGACATCTTGGAGGAAGAATACTTGGTTGGCAGAAGCATTTAGCCCATATGGAAGTCAAGACTATCTGAAGAAACATTGA

Protein Analysis

522

Amino Acids

59.75

Weight (kDa)

7.6

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 7 - 495 1.7e-35 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1307
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 447
AciI CCGC 3 cut(s) 393, 674, 1016
AclWI GGATC 1 cut(s) 1237
AcoI YGGCCR 1 cut(s) 1320
AcsI RAATTY 8 cut(s) 347, 504, 887, 1000, 1082, 1157, 1340, 1467
AcuI CTGAAG 2 cut(s) 140, 555
AfaI GTAC 1 cut(s) 452
AfiI CCNNNNNNNGG 6 cut(s) 117, 392, 447, 750, 1221, 1252
AflII CTTAAG 1 cut(s) 281
AgsI TTSAA 9 cut(s) 253, 298, 347, 545, 885, 896, 1039, 1082, 1284
AjnI CCWGG 2 cut(s) 1322, 1412
AjuI GAANNNNNNNTTGG 4 cut(s) 905, 937, 1496, 1528
AloI GAACNNNNNNTCC 4 cut(s) 118, 150, 1219, 1251
AluBI AGCT 8 cut(s) 62, 389, 554, 650, 662, 1109, 1185, 1348
AluI AGCT 8 cut(s) 62, 389, 554, 650, 662, 1109, 1185, 1348
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 4 cut(s) 19, 383, 431, 867
AlwI GGATC 1 cut(s) 1237
Ama87I CYCGRG 2 cut(s) 95, 1271
AoxI GGCC 6 cut(s) 99, 197, 243, 529, 547, 1320
ApeKI GCWGC 6 cut(s) 56, 59, 593, 1182, 1308, 1327
ApoI RAATTY 8 cut(s) 347, 504, 887, 1000, 1082, 1157, 1340, 1467
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
Asp700I GAANNNNTTC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 1308
AspS9I GGNCC 5 cut(s) 316, 530, 689, 1120, 1171
AsuHPI GGTGA 3 cut(s) 221, 341, 503
AvaI CYCGRG 2 cut(s) 95, 1271
AvaII GGWCC 4 cut(s) 316, 689, 1120, 1171
BalI TGGCCA 1 cut(s) 1322
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 786
Bbv12I GWGCWC 1 cut(s) 270
BbvI GCAGC 6 cut(s) 68, 71, 580, 1194, 1314, 1320
BccI CCATC 8 cut(s) 171, 706, 816, 976, 1067, 1133, 1474, 1479
BceAI ACGGC 1 cut(s) 751
BciT130I CCWGG 2 cut(s) 1324, 1414
BciVI GTATCC 1 cut(s) 1206
BcoDI GTCTC 4 cut(s) 19, 383, 431, 867
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 1 cut(s) 1420
BfrI CTTAAG 1 cut(s) 281
BfuI GTATCC 1 cut(s) 1206
BisI GCNGC 6 cut(s) 57, 60, 594, 1183, 1309, 1328
BlpI GCTNAGC 1 cut(s) 264
BlsI GCNGC 6 cut(s) 58, 61, 595, 1184, 1310, 1329
Bme1390I CCNGG 2 cut(s) 1324, 1414
Bme18I GGWCC 4 cut(s) 316, 689, 1120, 1171
BmeT110I CYCGRG 2 cut(s) 95, 1271
BmgT120I GGNCC 5 cut(s) 316, 530, 689, 1120, 1171
BmiI GGNNCC 3 cut(s) 6, 37, 1173
BmrFI CCNGG 2 cut(s) 1324, 1414
BmsI GCATC 4 cut(s) 36, 906, 980, 1458
BpiI GAAGAC 1 cut(s) 786
Bpu1102I GCTNAGC 1 cut(s) 264
BpuEI CTTGAG 2 cut(s) 254, 1391
Bsa29I ATCGAT 1 cut(s) 166
BsaBI GATNNNNATC 3 cut(s) 986, 1048, 1489
BsaI GGTCTC 1 cut(s) 431
BsaJI CCNNGG 4 cut(s) 194, 303, 685, 1011
BsaWI WCCGGW 2 cut(s) 318, 1168
BsaXI ACNNNNNCTCC 4 cut(s) 118, 148, 789, 819
Bsc4I CCNNNNNNNGG 6 cut(s) 117, 392, 447, 750, 1221, 1252
Bse118I RCCGGY 1 cut(s) 38
Bse1I ACTGG 3 cut(s) 585, 755, 1135
Bse3DI GCAATG 1 cut(s) 1429
Bse8I GATNNNNATC 3 cut(s) 986, 1048, 1489
BseBI CCWGG 2 cut(s) 1324, 1414
BseCI ATCGAT 1 cut(s) 166
BseDI CCNNGG 4 cut(s) 194, 303, 685, 1011
BseGI GGATG 3 cut(s) 971, 1234, 1490
BseJI GATNNNNATC 3 cut(s) 986, 1048, 1489
BseLI CCNNNNNNNGG 6 cut(s) 117, 392, 447, 750, 1221, 1252
BseMI GCAATG 1 cut(s) 1429
BseMII CTCAG 2 cut(s) 255, 847
BseNI ACTGG 3 cut(s) 585, 755, 1135
BseRI GAGGAG 2 cut(s) 974, 1490
BseXI GCAGC 6 cut(s) 68, 71, 580, 1194, 1314, 1320
BsgI GTGCAG 1 cut(s) 1379
BshFI GGCC 6 cut(s) 101, 199, 245, 531, 549, 1322
BshNI GGYRCC 1 cut(s) 35
BshVI ATCGAT 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 270
BsiHKCI CYCGRG 2 cut(s) 95, 1271
BsiSI CCGG 4 cut(s) 39, 319, 995, 1169
BslFI GGGAC 2 cut(s) 145, 221
BslI CCNNNNNNNGG 6 cut(s) 117, 392, 447, 750, 1221, 1252
BsmAI GTCTC 4 cut(s) 19, 383, 431, 867
BsmFI GGGAC 2 cut(s) 145, 221
BsnI GGCC 6 cut(s) 101, 199, 245, 531, 549, 1322
Bso31I GGTCTC 1 cut(s) 431
BsoBI CYCGRG 2 cut(s) 95, 1271
Bsp1286I GDGCHC 1 cut(s) 270
Bsp143I GATC 3 cut(s) 946, 1043, 1242
Bsp1720I GCTNAGC 1 cut(s) 264
BspACI CCGC 3 cut(s) 393, 674, 1016
BspANI GGCC 6 cut(s) 101, 199, 245, 531, 549, 1322
BspCNI CTCAG 2 cut(s) 256, 846
BspDI ATCGAT 1 cut(s) 166
BspLI GGNNCC 3 cut(s) 6, 37, 1173
BspPI GGATC 1 cut(s) 1237
BspQI GCTCTTC 1 cut(s) 561
BspT107I GGYRCC 1 cut(s) 35
BspTI CTTAAG 1 cut(s) 281
BspTNI GGTCTC 1 cut(s) 431
BsrDI GCAATG 1 cut(s) 1429
BsrFI RCCGGY 1 cut(s) 38
BsrI ACTGG 3 cut(s) 585, 755, 1135
BssAI RCCGGY 1 cut(s) 38
BssECI CCNNGG 4 cut(s) 194, 303, 685, 1011
BssMI GATC 3 cut(s) 946, 1043, 1242
BssT1I CCWWGG 3 cut(s) 194, 303, 685
Bst2UI CCWGG 2 cut(s) 1324, 1414
Bst4CI ACNGT 3 cut(s) 143, 739, 801
Bst6I CTCTTC 2 cut(s) 561, 1300
BstAFI CTTAAG 1 cut(s) 281
BstAPI GCANNNNNTGC 2 cut(s) 705, 1366
BstC8I GCNNGC 5 cut(s) 387, 391, 764, 876, 1320
BstDEI CTNAG 3 cut(s) 264, 833, 1098
BstEII GGTNACC 1 cut(s) 329
BstENI CCTNNNNNAGG 1 cut(s) 1219
BstF5I GGATG 3 cut(s) 971, 1234, 1490
BstHHI GCGC 1 cut(s) 1308
BstKTI GATC 3 cut(s) 949, 1046, 1245
BstMAI GTCTC 4 cut(s) 19, 383, 431, 867
BstMBI GATC 3 cut(s) 946, 1043, 1242
BstMWI GCNNNNNNNGC 4 cut(s) 560, 705, 1324, 1366
BstNI CCWGG 2 cut(s) 1324, 1414
BstNSI RCATGY 1 cut(s) 878
BstPI GGTNACC 1 cut(s) 329
BstSCI CCNGG 2 cut(s) 1322, 1412
BstSFI CTRYAG 1 cut(s) 1420
BstV1I GCAGC 6 cut(s) 68, 71, 580, 1194, 1314, 1320
BstV2I GAAGAC 1 cut(s) 786
BstXI CCANNNNNNTGG 1 cut(s) 1330
Bsu15I ATCGAT 1 cut(s) 166
BsuI GTATCC 1 cut(s) 1206
BsuRI GGCC 6 cut(s) 101, 199, 245, 531, 549, 1322
BsuTUI ATCGAT 1 cut(s) 166
BtsCI GGATG 3 cut(s) 971, 1234, 1490
BtsIMutI CAGTG 2 cut(s) 213, 452
Cac8I GCNNGC 5 cut(s) 387, 391, 764, 876, 1320
CfoI GCGC 1 cut(s) 1308
Cfr10I RCCGGY 1 cut(s) 38
Cfr13I GGNCC 5 cut(s) 316, 530, 689, 1120, 1171
ClaI ATCGAT 1 cut(s) 166
CseI GACGC 1 cut(s) 599
CsiI ACCWGGT 1 cut(s) 1412
Csp6I GTAC 1 cut(s) 451
CviAII CATG 5 cut(s) 560, 705, 875, 991, 1252
CviQI GTAC 1 cut(s) 451
DdeI CTNAG 3 cut(s) 264, 833, 1098
DpnI GATC 3 cut(s) 948, 1045, 1244
DpnII GATC 3 cut(s) 946, 1043, 1242
EaeI YGGCCR 1 cut(s) 1320
Eam1104I CTCTTC 2 cut(s) 561, 1300
EarI CTCTTC 2 cut(s) 561, 1300
EciI GGCGGA 1 cut(s) 1031
Eco130I CCWWGG 3 cut(s) 194, 303, 685
Eco147I AGGCCT 1 cut(s) 101
Eco31I GGTCTC 1 cut(s) 431
Eco47I GGWCC 4 cut(s) 316, 689, 1120, 1171
Eco57I CTGAAG 2 cut(s) 140, 555
Eco88I CYCGRG 2 cut(s) 95, 1271
Eco91I GGTNACC 1 cut(s) 329
EcoNI CCTNNNNNAGG 1 cut(s) 1219
EcoO109I RGGNCCY 1 cut(s) 530
EcoO65I GGTNACC 1 cut(s) 329
EcoRII CCWGG 2 cut(s) 1322, 1412
EcoT14I CCWWGG 3 cut(s) 194, 303, 685
EcoT22I ATGCAT 1 cut(s) 973
ErhI CCWWGG 3 cut(s) 194, 303, 685
FaeI CATG 5 cut(s) 563, 708, 878, 994, 1255
FaqI GGGAC 2 cut(s) 145, 221
FatI CATG 5 cut(s) 559, 704, 874, 990, 1251
FauNDI CATATG 2 cut(s) 1313, 1534
Fnu4HI GCNGC 6 cut(s) 57, 60, 594, 1183, 1309, 1328
FokI GGATG 3 cut(s) 958, 1221, 1497
Fsp4HI GCNGC 6 cut(s) 57, 60, 594, 1183, 1309, 1328
FspBI CTAG 1 cut(s) 71
FspI TGCGCA 1 cut(s) 1307
GlaI GCGC 1 cut(s) 1307
GluI GCNGC 6 cut(s) 57, 60, 594, 1183, 1309, 1328
HaeIII GGCC 6 cut(s) 101, 199, 245, 531, 549, 1322
HapII CCGG 4 cut(s) 39, 319, 995, 1169
HgaI GACGC 1 cut(s) 599
HhaI GCGC 1 cut(s) 1308
Hin1II CATG 5 cut(s) 563, 708, 878, 994, 1255
Hin6I GCGC 1 cut(s) 1306
HinP1I GCGC 1 cut(s) 1306
HindIII AAGCTT 1 cut(s) 1346
HinfI GANTC 4 cut(s) 107, 376, 431, 896
HpaII CCGG 4 cut(s) 39, 319, 995, 1169
HphI GGTGA 3 cut(s) 221, 341, 503
Hpy188I TCNGA 8 cut(s) 106, 187, 375, 436, 836, 1012, 1300, 1554
Hpy188III TCNNGA 7 cut(s) 95, 421, 509, 566, 1271, 1273, 1544
Hpy99I CGWCG 1 cut(s) 1466
HpyAV CCTTC 5 cut(s) 234, 466, 689, 838, 1209
HpyCH4III ACNGT 3 cut(s) 143, 739, 801
HpyCH4V TGCA 8 cut(s) 477, 576, 708, 878, 971, 1127, 1360, 1434
HpyF10VI GCNNNNNNNGC 4 cut(s) 560, 705, 1324, 1366
HpyF3I CTNAG 3 cut(s) 264, 833, 1098
Hsp92II CATG 5 cut(s) 563, 708, 878, 994, 1255
HspAI GCGC 1 cut(s) 1306
Kzo9I GATC 3 cut(s) 946, 1043, 1242
LguI GCTCTTC 1 cut(s) 561
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 6 cut(s) 68, 71, 580, 1194, 1314, 1320
LweI GCATC 4 cut(s) 36, 906, 980, 1458
MabI ACCWGGT 1 cut(s) 1412
MaeI CTAG 1 cut(s) 71
MaeIII GTNAC 2 cut(s) 170, 329
MalI GATC 3 cut(s) 948, 1045, 1244
MboI GATC 3 cut(s) 946, 1043, 1242
MboII GAAGA 7 cut(s) 548, 786, 925, 997, 1280, 1287, 1513
MhlI GDGCHC 1 cut(s) 270
MlsI TGGCCA 1 cut(s) 1322
MluNI TGGCCA 1 cut(s) 1322
MlyI GAGTC 2 cut(s) 101, 385
MmeI TCCRAC 1 cut(s) 1170
Mox20I TGGCCA 1 cut(s) 1322
Mph1103I ATGCAT 1 cut(s) 973
MroXI GAANNNNTTC 1 cut(s) 540
MscI TGGCCA 1 cut(s) 1322
MseI TTAA 2 cut(s) 282, 1344
MslI CAYNNNNRTG 3 cut(s) 168, 273, 1054
Msp20I TGGCCA 1 cut(s) 1322
MspA1I CMGCKG 1 cut(s) 389
MspCI CTTAAG 1 cut(s) 281
MspI CCGG 4 cut(s) 39, 319, 995, 1169
MspR9I CCNGG 2 cut(s) 1324, 1414
MvaI CCWGG 2 cut(s) 1324, 1414
MwoI GCNNNNNNNGC 4 cut(s) 560, 705, 1324, 1366
NdeI CATATG 2 cut(s) 1313, 1534
NdeII GATC 3 cut(s) 946, 1043, 1242
NlaIII CATG 5 cut(s) 563, 708, 878, 994, 1255
NlaIV GGNNCC 3 cut(s) 6, 37, 1173
NmuCI GTSAC 2 cut(s) 170, 329
NsbI TGCGCA 1 cut(s) 1307
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 1 cut(s) 878
PaeI GCATGC 1 cut(s) 878
PaeR7I CTCGAG 2 cut(s) 95, 1271
PceI AGGCCT 1 cut(s) 101
PciSI GCTCTTC 1 cut(s) 561
PcsI WCGNNNNNNNCGW 1 cut(s) 1470
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 2 cut(s) 431, 896
PflMI CCANNNNNTGG 1 cut(s) 447
PkrI GCNGC 6 cut(s) 58, 61, 595, 1184, 1310, 1329
PleI GAGTC 2 cut(s) 101, 384
PpsI GAGTC 2 cut(s) 101, 384
Psp6I CCWGG 2 cut(s) 1322, 1412
PspEI GGTNACC 1 cut(s) 329
PspGI CCWGG 2 cut(s) 1322, 1412
PspN4I GGNNCC 3 cut(s) 6, 37, 1173
PspPI GGNCC 5 cut(s) 316, 530, 689, 1120, 1171
PvuII CAGCTG 1 cut(s) 389
RsaI GTAC 1 cut(s) 452
RsaNI GTAC 1 cut(s) 451
RseI CAYNNNNRTG 3 cut(s) 168, 273, 1054
SapI GCTCTTC 1 cut(s) 561
SaqAI TTAA 2 cut(s) 282, 1344
SatI GCNGC 6 cut(s) 57, 60, 594, 1183, 1309, 1328
Sau3AI GATC 3 cut(s) 946, 1043, 1242
Sau96I GGNCC 5 cut(s) 316, 530, 689, 1120, 1171
SchI GAGTC 2 cut(s) 101, 385
ScrFI CCNGG 2 cut(s) 1324, 1414
SduI GDGCHC 1 cut(s) 270
SexAI ACCWGGT 1 cut(s) 1412
SfaNI GCATC 4 cut(s) 36, 906, 980, 1458
SfcI CTRYAG 1 cut(s) 1420
Sfr274I CTCGAG 2 cut(s) 95, 1271
SinI GGWCC 4 cut(s) 316, 689, 1120, 1171
SlaI CTCGAG 2 cut(s) 95, 1271
SmiMI CAYNNNNRTG 3 cut(s) 168, 273, 1054
SmlI CTYRAG 5 cut(s) 95, 233, 281, 1271, 1370
SmoI CTYRAG 5 cut(s) 95, 233, 281, 1271, 1370
SphI GCATGC 1 cut(s) 878
SseBI AGGCCT 1 cut(s) 101
SsiI CCGC 3 cut(s) 393, 674, 1016
SspMI CTAG 1 cut(s) 71
StuI AGGCCT 1 cut(s) 101
StyD4I CCNGG 2 cut(s) 1322, 1412
StyI CCWWGG 3 cut(s) 194, 303, 685
TaaI ACNGT 3 cut(s) 143, 739, 801
TaqI TCGA 6 cut(s) 96, 166, 312, 459, 666, 1272
TaqII GACCGA 1 cut(s) 348
TfiI GAWTC 2 cut(s) 431, 896
Tru1I TTAA 2 cut(s) 282, 1344
Tru9I TTAA 2 cut(s) 282, 1344
TscAI CASTG 2 cut(s) 220, 452
TseFI GTSAC 2 cut(s) 170, 329
TseI GCWGC 6 cut(s) 56, 59, 593, 1182, 1308, 1327
Tsp45I GTSAC 2 cut(s) 170, 329
TspDTI ATGAA 6 cut(s) 313, 454, 548, 942, 1150, 1223
TspRI CASTG 2 cut(s) 220, 452
Van91I CCANNNNNTGG 1 cut(s) 447
Vha464I CTTAAG 1 cut(s) 281
VpaK11BI GGWCC 4 cut(s) 316, 689, 1120, 1171
XagI CCTNNNNNAGG 1 cut(s) 1219
XapI RAATTY 8 cut(s) 347, 504, 887, 1000, 1082, 1157, 1340, 1467
XceI RCATGY 1 cut(s) 878
XhoI CTCGAG 2 cut(s) 95, 1271
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 1 cut(s) 71
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.