flavin-containing monooxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19250 AT5G45180 |
| fragaria_vesca | FvH4_1g09240 FvH4_2g37000 |
| malus_domestica | MD02G1099600.v1.1 MD08G1046700.v1.1 MD08G1046800.v1.1 MD15G1047200.v1.1 MD15G1222400.v1.1 |
| prunus_persica | Prupe.1G401400_v2.0.a1 Prupe.7G193500_v2.0.a1 |
| pyrus_communis | pycom02g07750 pycom08g03910 pycom08g03920 pycom15g04540 pycom15g04600 |
| rosa_chinensis | RchiOBHm_Chr2g0095771 RchiOBHm_Chr6g0304751 |
| rosa_laevigata | RLG00000010953 RLG00000016591 |
| rosa_multiflora | Rmu_co8416307.1_g000001 Rmu_sc0031036.1_g000001 Rmu_ssc0000139.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00146110 Rroxscaffold_7G00163530 |
| rosa_rugosa | Rorug02G0053100 Rorug06G0334200 |
| rosa_samantha | Rh2AG101500 Rh2AG101600 Rh2BG103200 Rh2CG105500 Rh2DG102900 Rh6AG446100 Rh6BG455500 Rh6CG459500 Rh6DG446400 |
| rosa_wichuraiana | Rw2G007710 Rw6G038810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1307 |
| AccB1I | GGYRCC | 1 cut(s) | 35 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 447 |
| AccII | CGCG | 1 cut(s) | 393 |
| AciI | CCGC | 2 cut(s) | 391, 393 |
| AclWI | GGATC | 1 cut(s) | 1237 |
| AcoI | YGGCCR | 1 cut(s) | 984 |
| AcsI | RAATTY | 4 cut(s) | 1000, 1082, 1340, 1467 |
| AcuI | CTGAAG | 2 cut(s) | 555, 1281 |
| AcyI | GRCGYC | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 452 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 392, 447, 750, 751, 1221, 1252, 1357 |
| AflII | CTTAAG | 1 cut(s) | 281 |
| AgsI | TTSAA | 7 cut(s) | 98, 158, 298, 545, 786, 896, 1039 |
| AjiI | CACGTC | 1 cut(s) | 170 |
| AjnI | CCWGG | 2 cut(s) | 385, 1412 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 905, 937, 1496, 1528 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 118, 150 |
| AluBI | AGCT | 7 cut(s) | 70, 154, 650, 828, 916, 1185, 1348 |
| AluI | AGCT | 7 cut(s) | 70, 154, 650, 828, 916, 1185, 1348 |
| Alw26I | GTCTC | 4 cut(s) | 19, 867, 1211, 1402 |
| AlwI | GGATC | 1 cut(s) | 1237 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 556 |
| Ama87I | CYCGRG | 1 cut(s) | 1271 |
| AoxI | GGCC | 8 cut(s) | 197, 376, 388, 438, 529, 547, 837, 984 |
| ApaI | GGGCCC | 1 cut(s) | 841 |
| ApeKI | GCWGC | 8 cut(s) | 56, 59, 67, 593, 916, 1182, 1308, 1327 |
| ApoI | RAATTY | 4 cut(s) | 1000, 1082, 1340, 1467 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 938, 970 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1004 |
| AspLEI | GCGC | 1 cut(s) | 1308 |
| AspS9I | GGNCC | 5 cut(s) | 376, 530, 689, 837, 838 |
| AsuC2I | CCSGG | 1 cut(s) | 335 |
| AsuHPI | GGTGA | 2 cut(s) | 341, 503 |
| AsuII | TTCGAA | 1 cut(s) | 1283 |
| AsuNHI | GCTAGC | 1 cut(s) | 70 |
| AvaI | CYCGRG | 1 cut(s) | 1271 |
| AvaII | GGWCC | 1 cut(s) | 689 |
| AxyI | CCTNAGG | 1 cut(s) | 833 |
| BaeGI | GKGCMC | 2 cut(s) | 841, 1229 |
| BalI | TGGCCA | 1 cut(s) | 986 |
| BanI | GGYRCC | 1 cut(s) | 35 |
| BanII | GRGCYC | 1 cut(s) | 841 |
| BbsI | GAAGAC | 1 cut(s) | 969 |
| BbvI | GCAGC | 8 cut(s) | 68, 71, 79, 580, 903, 1194, 1314, 1320 |
| BciT130I | CCWGG | 2 cut(s) | 387, 1414 |
| BcnI | CCSGG | 1 cut(s) | 335 |
| BcoDI | GTCTC | 4 cut(s) | 19, 867, 1211, 1402 |
| BfaI | CTAG | 4 cut(s) | 71, 854, 1190, 1323 |
| BfrI | CTTAAG | 1 cut(s) | 281 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1536 |
| BisI | GCNGC | 9 cut(s) | 57, 60, 68, 391, 594, 917, 1183, 1309, 1328 |
| BlpI | GCTNAGC | 2 cut(s) | 52, 264 |
| BlsI | GCNGC | 9 cut(s) | 58, 61, 69, 392, 595, 918, 1184, 1310, 1329 |
| Bme1390I | CCNGG | 3 cut(s) | 335, 387, 1414 |
| Bme18I | GGWCC | 1 cut(s) | 689 |
| BmeT110I | CYCGRG | 1 cut(s) | 1271 |
| BmgBI | CACGTC | 1 cut(s) | 170 |
| BmgT120I | GGNCC | 5 cut(s) | 376, 530, 689, 837, 838 |
| BmiI | GGNNCC | 4 cut(s) | 6, 37, 377, 839 |
| BmrFI | CCNGG | 3 cut(s) | 335, 387, 1414 |
| BmsI | GCATC | 3 cut(s) | 36, 980, 1458 |
| BmtI | GCTAGC | 1 cut(s) | 74 |
| BpiI | GAAGAC | 1 cut(s) | 969 |
| BpmI | CTGGAG | 1 cut(s) | 145 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 52, 264 |
| Bpu14I | TTCGAA | 1 cut(s) | 1283 |
| BpuEI | CTTGAG | 2 cut(s) | 254, 1391 |
| BpuMI | CCSGG | 1 cut(s) | 335 |
| BsaBI | GATNNNNATC | 2 cut(s) | 986, 1048 |
| BsaHI | GRCGYC | 1 cut(s) | 120 |
| BsaI | GGTCTC | 1 cut(s) | 1211 |
| BsaJI | CCNNGG | 4 cut(s) | 194, 303, 391, 711 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 118, 148, 789, 819, 1469, 1499 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 392, 447, 750, 751, 1221, 1252, 1357 |
| Bse118I | RCCGGY | 1 cut(s) | 38 |
| Bse1I | ACTGG | 1 cut(s) | 1135 |
| Bse21I | CCTNAGG | 1 cut(s) | 833 |
| Bse3DI | GCAATG | 1 cut(s) | 1429 |
| Bse8I | GATNNNNATC | 2 cut(s) | 986, 1048 |
| BseBI | CCWGG | 2 cut(s) | 387, 1414 |
| BseDI | CCNNGG | 4 cut(s) | 194, 303, 391, 711 |
| BseGI | GGATG | 3 cut(s) | 949, 971, 1234 |
| BseJI | GATNNNNATC | 2 cut(s) | 986, 1048 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 392, 447, 750, 751, 1221, 1252, 1357 |
| BseMI | GCAATG | 1 cut(s) | 1429 |
| BseMII | CTCAG | 4 cut(s) | 278, 847, 987, 1002 |
| BseNI | ACTGG | 1 cut(s) | 1135 |
| BseRI | GAGGAG | 1 cut(s) | 1490 |
| BseSI | GKGCMC | 2 cut(s) | 841, 1229 |
| BseXI | GCAGC | 8 cut(s) | 68, 71, 79, 580, 903, 1194, 1314, 1320 |
| BsgI | GTGCAG | 2 cut(s) | 440, 693 |
| Bsh1236I | CGCG | 1 cut(s) | 393 |
| BshFI | GGCC | 8 cut(s) | 199, 378, 390, 440, 531, 549, 839, 986 |
| BshNI | GGYRCC | 1 cut(s) | 35 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1271 |
| BsiSI | CCGG | 2 cut(s) | 39, 334 |
| BslFI | GGGAC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 392, 447, 750, 751, 1221, 1252, 1357 |
| BsmAI | GTCTC | 4 cut(s) | 19, 867, 1211, 1402 |
| BsmFI | GGGAC | 1 cut(s) | 221 |
| BsnI | GGCC | 8 cut(s) | 199, 378, 390, 440, 531, 549, 839, 986 |
| Bso31I | GGTCTC | 1 cut(s) | 1211 |
| BsoBI | CYCGRG | 1 cut(s) | 1271 |
| Bsp119I | TTCGAA | 1 cut(s) | 1283 |
| Bsp120I | GGGCCC | 1 cut(s) | 837 |
| Bsp1286I | GDGCHC | 2 cut(s) | 841, 1229 |
| Bsp143I | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 52, 264 |
| Bsp19I | CCATGG | 1 cut(s) | 711 |
| BspACI | CCGC | 2 cut(s) | 391, 393 |
| BspANI | GGCC | 8 cut(s) | 199, 378, 390, 440, 531, 549, 839, 986 |
| BspCNI | CTCAG | 4 cut(s) | 277, 846, 988, 1003 |
| BspFNI | CGCG | 1 cut(s) | 393 |
| BspLI | GGNNCC | 4 cut(s) | 6, 37, 377, 839 |
| BspOI | GCTAGC | 1 cut(s) | 74 |
| BspPI | GGATC | 1 cut(s) | 1237 |
| BspT104I | TTCGAA | 1 cut(s) | 1283 |
| BspT107I | GGYRCC | 1 cut(s) | 35 |
| BspTI | CTTAAG | 1 cut(s) | 281 |
| BspTNI | GGTCTC | 1 cut(s) | 1211 |
| BsrDI | GCAATG | 1 cut(s) | 1429 |
| BsrFI | RCCGGY | 1 cut(s) | 38 |
| BsrI | ACTGG | 1 cut(s) | 1135 |
| BssAI | RCCGGY | 1 cut(s) | 38 |
| BssECI | CCNNGG | 4 cut(s) | 194, 303, 391, 711 |
| BssMI | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| BssNI | GRCGYC | 1 cut(s) | 120 |
| BssT1I | CCWWGG | 3 cut(s) | 194, 303, 711 |
| Bst2UI | CCWGG | 2 cut(s) | 387, 1414 |
| Bst4CI | ACNGT | 7 cut(s) | 143, 343, 513, 739, 801, 909, 1460 |
| Bst6I | CTCTTC | 1 cut(s) | 1300 |
| BstACI | GRCGYC | 1 cut(s) | 120 |
| BstAFI | CTTAAG | 1 cut(s) | 281 |
| BstBI | TTCGAA | 1 cut(s) | 1283 |
| BstC8I | GCNNGC | 5 cut(s) | 72, 561, 876, 1187, 1320 |
| BstDEI | CTNAG | 6 cut(s) | 52, 264, 833, 996, 1011, 1098 |
| BstDSI | CCRYGG | 2 cut(s) | 391, 711 |
| BstEII | GGTNACC | 1 cut(s) | 329 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1219 |
| BstF5I | GGATG | 3 cut(s) | 949, 971, 1234 |
| BstFNI | CGCG | 1 cut(s) | 393 |
| BstHHI | GCGC | 1 cut(s) | 1308 |
| BstKTI | GATC | 4 cut(s) | 794, 1046, 1104, 1245 |
| BstMAI | GTCTC | 4 cut(s) | 19, 867, 1211, 1402 |
| BstMBI | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1324, 1536 |
| BstNI | CCWGG | 2 cut(s) | 387, 1414 |
| BstNSI | RCATGY | 2 cut(s) | 563, 878 |
| BstPI | GGTNACC | 1 cut(s) | 329 |
| BstSCI | CCNGG | 3 cut(s) | 333, 385, 1412 |
| BstSLI | GKGCMC | 2 cut(s) | 841, 1229 |
| BstUI | CGCG | 1 cut(s) | 393 |
| BstV1I | GCAGC | 8 cut(s) | 68, 71, 79, 580, 903, 1194, 1314, 1320 |
| BstV2I | GAAGAC | 1 cut(s) | 969 |
| Bsu36I | CCTNAGG | 1 cut(s) | 833 |
| BsuRI | GGCC | 8 cut(s) | 199, 378, 390, 440, 531, 549, 839, 986 |
| BtgI | CCRYGG | 2 cut(s) | 391, 711 |
| BtrI | CACGTC | 1 cut(s) | 170 |
| BtsCI | GGATG | 3 cut(s) | 949, 971, 1234 |
| BtsI | GCAGTG | 1 cut(s) | 885 |
| BtsIMutI | CAGTG | 3 cut(s) | 452, 885, 1465 |
| Cac8I | GCNNGC | 5 cut(s) | 72, 561, 876, 1187, 1320 |
| CaiI | CAGNNNCTG | 1 cut(s) | 556 |
| CfoI | GCGC | 1 cut(s) | 1308 |
| Cfr10I | RCCGGY | 1 cut(s) | 38 |
| Cfr13I | GGNCC | 5 cut(s) | 376, 530, 689, 837, 838 |
| Cfr42I | CCGCGG | 1 cut(s) | 394 |
| CseI | GACGC | 2 cut(s) | 109, 599 |
| CsiI | ACCWGGT | 1 cut(s) | 1412 |
| Csp6I | GTAC | 1 cut(s) | 451 |
| CviAII | CATG | 6 cut(s) | 560, 705, 712, 875, 991, 1252 |
| CviQI | GTAC | 1 cut(s) | 451 |
| DdeI | CTNAG | 6 cut(s) | 52, 264, 833, 996, 1011, 1098 |
| DpnI | GATC | 4 cut(s) | 793, 1045, 1103, 1244 |
| DpnII | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| EaeI | YGGCCR | 1 cut(s) | 984 |
| Eam1104I | CTCTTC | 1 cut(s) | 1300 |
| EarI | CTCTTC | 1 cut(s) | 1300 |
| Eco130I | CCWWGG | 3 cut(s) | 194, 303, 711 |
| Eco24I | GRGCYC | 1 cut(s) | 841 |
| Eco31I | GGTCTC | 1 cut(s) | 1211 |
| Eco47I | GGWCC | 1 cut(s) | 689 |
| Eco57I | CTGAAG | 2 cut(s) | 555, 1281 |
| Eco81I | CCTNAGG | 1 cut(s) | 833 |
| Eco88I | CYCGRG | 1 cut(s) | 1271 |
| Eco91I | GGTNACC | 1 cut(s) | 329 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1219 |
| EcoO109I | RGGNCCY | 4 cut(s) | 376, 530, 837, 838 |
| EcoO65I | GGTNACC | 1 cut(s) | 329 |
| EcoRII | CCWGG | 2 cut(s) | 385, 1412 |
| EcoT14I | CCWWGG | 3 cut(s) | 194, 303, 711 |
| EcoT22I | ATGCAT | 1 cut(s) | 973 |
| EcoT38I | GRGCYC | 1 cut(s) | 841 |
| ErhI | CCWWGG | 3 cut(s) | 194, 303, 711 |
| FaeI | CATG | 6 cut(s) | 563, 708, 715, 878, 994, 1255 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1148, 1180 |
| FaqI | GGGAC | 1 cut(s) | 221 |
| FatI | CATG | 6 cut(s) | 559, 704, 711, 874, 990, 1251 |
| FauNDI | CATATG | 1 cut(s) | 1313 |
| Fnu4HI | GCNGC | 9 cut(s) | 57, 60, 68, 391, 594, 917, 1183, 1309, 1328 |
| FokI | GGATG | 3 cut(s) | 936, 958, 1221 |
| FriOI | GRGCYC | 1 cut(s) | 841 |
| Fsp4HI | GCNGC | 9 cut(s) | 57, 60, 68, 391, 594, 917, 1183, 1309, 1328 |
| FspBI | CTAG | 4 cut(s) | 71, 854, 1190, 1323 |
| FspI | TGCGCA | 1 cut(s) | 1307 |
| GlaI | GCGC | 1 cut(s) | 1307 |
| GluI | GCNGC | 9 cut(s) | 57, 60, 68, 391, 594, 917, 1183, 1309, 1328 |
| GsuI | CTGGAG | 1 cut(s) | 145 |
| HaeIII | GGCC | 8 cut(s) | 199, 378, 390, 440, 531, 549, 839, 986 |
| HapII | CCGG | 2 cut(s) | 39, 334 |
| HgaI | GACGC | 2 cut(s) | 109, 599 |
| HhaI | GCGC | 1 cut(s) | 1308 |
| Hin1I | GRCGYC | 1 cut(s) | 120 |
| Hin1II | CATG | 6 cut(s) | 563, 708, 715, 878, 994, 1255 |
| Hin6I | GCGC | 1 cut(s) | 1306 |
| HinP1I | GCGC | 1 cut(s) | 1306 |
| HindIII | AAGCTT | 2 cut(s) | 152, 826 |
| HinfI | GANTC | 7 cut(s) | 107, 254, 431, 553, 896, 1030, 1049 |
| HpaII | CCGG | 2 cut(s) | 39, 334 |
| HphI | GGTGA | 2 cut(s) | 341, 503 |
| Hpy166II | GTNNAC | 1 cut(s) | 1488 |
| Hpy188I | TCNGA | 8 cut(s) | 106, 187, 436, 601, 1012, 1048, 1300, 1554 |
| Hpy188III | TCNNGA | 9 cut(s) | 95, 124, 233, 289, 566, 1271, 1273, 1399, 1544 |
| Hpy8I | GTNNAC | 1 cut(s) | 1488 |
| HpyAV | CCTTC | 7 cut(s) | 234, 466, 539, 613, 689, 1209, 1298 |
| HpyCH4III | ACNGT | 7 cut(s) | 143, 343, 513, 739, 801, 909, 1460 |
| HpyCH4IV | ACGT | 1 cut(s) | 169 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1324, 1536 |
| HpyF3I | CTNAG | 6 cut(s) | 52, 264, 833, 996, 1011, 1098 |
| HpySE526I | ACGT | 1 cut(s) | 169 |
| Hsp92I | GRCGYC | 1 cut(s) | 120 |
| Hsp92II | CATG | 6 cut(s) | 563, 708, 715, 878, 994, 1255 |
| HspAI | GCGC | 1 cut(s) | 1306 |
| KspI | CCGCGG | 1 cut(s) | 394 |
| Kzo9I | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| LmnI | GCTCC | 4 cut(s) | 10, 854, 1353, 1360 |
| Lsp1109I | GCAGC | 8 cut(s) | 68, 71, 79, 580, 903, 1194, 1314, 1320 |
| LweI | GCATC | 3 cut(s) | 36, 980, 1458 |
| MabI | ACCWGGT | 1 cut(s) | 1412 |
| MaeI | CTAG | 4 cut(s) | 71, 854, 1190, 1323 |
| MaeII | ACGT | 1 cut(s) | 169 |
| MaeIII | GTNAC | 2 cut(s) | 170, 329 |
| MalI | GATC | 4 cut(s) | 793, 1045, 1103, 1244 |
| MboI | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| MboII | GAAGA | 6 cut(s) | 786, 974, 997, 1287, 1414, 1513 |
| MfeI | CAATTG | 1 cut(s) | 9 |
| MhlI | GDGCHC | 2 cut(s) | 841, 1229 |
| MlsI | TGGCCA | 1 cut(s) | 986 |
| MluCI | AATT | 8 cut(s) | 9, 298, 578, 1000, 1082, 1340, 1388, 1467 |
| MluNI | TGGCCA | 1 cut(s) | 986 |
| MlyI | GAGTC | 2 cut(s) | 248, 547 |
| Mox20I | TGGCCA | 1 cut(s) | 986 |
| Mph1103I | ATGCAT | 1 cut(s) | 973 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1004 |
| MscI | TGGCCA | 1 cut(s) | 986 |
| MseI | TTAA | 3 cut(s) | 282, 1155, 1344 |
| MslI | CAYNNNNRTG | 3 cut(s) | 168, 273, 1461 |
| Msp20I | TGGCCA | 1 cut(s) | 986 |
| MspA1I | CMGCKG | 1 cut(s) | 393 |
| MspCI | CTTAAG | 1 cut(s) | 281 |
| MspI | CCGG | 2 cut(s) | 39, 334 |
| MspR9I | CCNGG | 3 cut(s) | 335, 387, 1414 |
| MunI | CAATTG | 1 cut(s) | 9 |
| MvaI | CCWGG | 2 cut(s) | 387, 1414 |
| MvnI | CGCG | 1 cut(s) | 393 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1324, 1536 |
| NciI | CCSGG | 1 cut(s) | 335 |
| NcoI | CCATGG | 1 cut(s) | 711 |
| NdeI | CATATG | 1 cut(s) | 1313 |
| NdeII | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| NheI | GCTAGC | 1 cut(s) | 70 |
| NlaIII | CATG | 6 cut(s) | 563, 708, 715, 878, 994, 1255 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 37, 377, 839 |
| NmuCI | GTSAC | 2 cut(s) | 170, 329 |
| NsbI | TGCGCA | 1 cut(s) | 1307 |
| NsiI | ATGCAT | 1 cut(s) | 973 |
| NspI | RCATGY | 2 cut(s) | 563, 878 |
| NspV | TTCGAA | 1 cut(s) | 1283 |
| PaeI | GCATGC | 2 cut(s) | 563, 878 |
| PaeR7I | CTCGAG | 1 cut(s) | 1271 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1004 |
| PfeI | GAWTC | 5 cut(s) | 107, 431, 896, 1030, 1049 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 447 |
| PkrI | GCNGC | 9 cut(s) | 58, 61, 69, 392, 595, 918, 1184, 1310, 1329 |
| PleI | GAGTC | 2 cut(s) | 248, 547 |
| PpsI | GAGTC | 2 cut(s) | 248, 547 |
| Psp6I | CCWGG | 2 cut(s) | 385, 1412 |
| PspEI | GGTNACC | 1 cut(s) | 329 |
| PspGI | CCWGG | 2 cut(s) | 385, 1412 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 37, 377, 839 |
| PspOMI | GGGCCC | 1 cut(s) | 837 |
| PspPI | GGNCC | 5 cut(s) | 376, 530, 689, 837, 838 |
| PstNI | CAGNNNCTG | 1 cut(s) | 556 |
| RsaI | GTAC | 1 cut(s) | 452 |
| RsaNI | GTAC | 1 cut(s) | 451 |
| RseI | CAYNNNNRTG | 3 cut(s) | 168, 273, 1461 |
| SacII | CCGCGG | 1 cut(s) | 394 |
| SaqAI | TTAA | 3 cut(s) | 282, 1155, 1344 |
| SatI | GCNGC | 9 cut(s) | 57, 60, 68, 391, 594, 917, 1183, 1309, 1328 |
| Sau3AI | GATC | 4 cut(s) | 791, 1043, 1101, 1242 |
| Sau96I | GGNCC | 5 cut(s) | 376, 530, 689, 837, 838 |
| SchI | GAGTC | 2 cut(s) | 248, 547 |
| ScrFI | CCNGG | 3 cut(s) | 335, 387, 1414 |
| SduI | GDGCHC | 2 cut(s) | 841, 1229 |
| SexAI | ACCWGGT | 1 cut(s) | 1412 |
| SfaNI | GCATC | 3 cut(s) | 36, 980, 1458 |
| Sfr274I | CTCGAG | 1 cut(s) | 1271 |
| Sfr303I | CCGCGG | 1 cut(s) | 394 |
| SfuI | TTCGAA | 1 cut(s) | 1283 |
| SgrBI | CCGCGG | 1 cut(s) | 394 |
| SinI | GGWCC | 1 cut(s) | 689 |
| SlaI | CTCGAG | 1 cut(s) | 1271 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 168, 273, 1461 |
| SmlI | CTYRAG | 4 cut(s) | 233, 281, 1271, 1370 |
| SmoI | CTYRAG | 4 cut(s) | 233, 281, 1271, 1370 |
| SphI | GCATGC | 2 cut(s) | 563, 878 |
| Sse9I | AATT | 8 cut(s) | 9, 298, 578, 1000, 1082, 1340, 1388, 1467 |
| SsiI | CCGC | 2 cut(s) | 391, 393 |
| SspMI | CTAG | 4 cut(s) | 71, 854, 1190, 1323 |
| StyD4I | CCNGG | 3 cut(s) | 333, 385, 1412 |
| StyI | CCWWGG | 3 cut(s) | 194, 303, 711 |
| TaaI | ACNGT | 7 cut(s) | 143, 343, 513, 739, 801, 909, 1460 |
| TaiI | ACGT | 1 cut(s) | 172 |
| TaqI | TCGA | 6 cut(s) | 312, 459, 666, 1272, 1283, 1400 |
| TasI | AATT | 8 cut(s) | 9, 298, 578, 1000, 1082, 1340, 1388, 1467 |
| TauI | GCSGC | 1 cut(s) | 393 |
| TfiI | GAWTC | 5 cut(s) | 107, 431, 896, 1030, 1049 |
| Tru1I | TTAA | 3 cut(s) | 282, 1155, 1344 |
| Tru9I | TTAA | 3 cut(s) | 282, 1155, 1344 |
| TscAI | CASTG | 3 cut(s) | 452, 885, 1465 |
| TseFI | GTSAC | 2 cut(s) | 170, 329 |
| TseI | GCWGC | 8 cut(s) | 56, 59, 67, 593, 916, 1182, 1308, 1327 |
| Tsp45I | GTSAC | 2 cut(s) | 170, 329 |
| TspDTI | ATGAA | 2 cut(s) | 454, 1479 |
| TspRI | CASTG | 3 cut(s) | 452, 885, 1465 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 447 |
| Vha464I | CTTAAG | 1 cut(s) | 281 |
| VpaK11BI | GGWCC | 1 cut(s) | 689 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1219 |
| XapI | RAATTY | 4 cut(s) | 1000, 1082, 1340, 1467 |
| XceI | RCATGY | 2 cut(s) | 563, 878 |
| XhoI | CTCGAG | 1 cut(s) | 1271 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1004 |
| XspI | CTAG | 4 cut(s) | 71, 854, 1190, 1323 |
| Zsp2I | ATGCAT | 1 cut(s) | 973 |