Rroxscaffold_2G00146110

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
83959859 .. 83962919
3061 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00146110.1

Sequence Viewer

Length: 1302 bp
ATGGCTCCGGTTGTCTCAAAAGTTGGGATTATTGGTGCCGGAGTGAGCGGCATAGCGGCTGCGAAACACCTAACCCATCACAACCCTATTGTCCTCGAGGCCTCTGACTCCATTGGAGGGGTCTGGAGGCATTGCTCGTACAACTCCACAAAGCTTCAGTCTCATCGACGCGATTACGAGTTCTCTGACTTTCCTTGGAATGATAGGGACAATCCAGAATACCCTTCTCACCTTGAGATATTGGATTACTTGAACTCTTATGCAGAGCACTTTGACGTGCTCAAGTTTGTGAGGTTCAACTCCAAGGTCGTCGAGGTTCGCTTTGTTGGTGACCGGGAAACCATTGATGCTGGTTTTAAACCACCGGCGGGTCAGCCTGCTTGGGAAGTTTCTGTGCAGACCAGTGGTGAAGATACCATTCAGTGGTACGCCTTCGAGTTCCTTGTGGTCTGTATTGGGAAATATGGTGACATACCCAGAATTCCAGATTTTCCACACAACAAAGGCCCTCAAGTGTTTCAAGGTCAGGTTCTGCATTCTCTTGATTACTGCAAACTAGACAAGGAAGCTGCTTCTGACTTACTCAAGGATAAGAAGGTCGTCGTGAGGCATGCAATTTCAAAGTTTATCGAATCATACATTCTGTGGAAGCTTCCTTTGGAGAAGTATGGACTAAAACCAGATCACTCTTTCGAGGAAGACTACGCTTCCTGCCAGATGGCTATCACACCTGAGAACTTGTTCTCCGAGGCTGATAAGGGAAGGATCGTGTTCAAGAGATCACAAGGAAATTGGTGGTTTAATAAAGACGGAATTGAGTTTGACGACGGCAGTAAGATCGACGCTGATGTTGTGGTCCTTGCAACTGGCTATGATGGTAAGAAGAAGCTCAAAGCCATCTTACCAGATCCCTTCAGAAGCTTGTTGGAATACCCATCTGGTATTATGCCTTTATACAGGGGTACAATCCATCCTTTGATCCCAAACATGGCTTTTGTGGGTTATCTGGAGAGTGTTTCGAACCTGCATTCTTCTGAGTTGCGCAGCATATGGCTGGCTCGACTTATAGATAATAAGTTTAAGCTCCCAAGTGTGGAGAAAATGCTTGAGCAGACAACTAAAGAGCTGGAAGTGATGAAGGACACCACCAGGTTCTACAAGAGGTTCTGCATCTCTACTTTTAGCATCAACCACAGTGACGAAATTTGTGAGGAGATGGGATGGACATCTTGGAGGAAGAATACCTGGTTGGCAGAGGCATTTAGCCCTTATGGGAGTCAAGACTATCTGCAGAAATACTGA

Protein Analysis

433

Amino Acids

49.61

Weight (kDa)

5.99

Isoelectric Point (pI)

37.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 7 - 202 3.3e-21 Flavin-binding monooxygenase-like
FMO-like PF00743 213 - 407 1.6e-07 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 95
Acc16I TGCGCA 1 cut(s) 1043
Acc36I ACCTGC 1 cut(s) 1032
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 423
AccBSI CCGCTC 1 cut(s) 48
AccII CGCG 1 cut(s) 171
AciI CCGC 3 cut(s) 48, 56, 368
AclWI GGATC 3 cut(s) 773, 902, 973
AcsI RAATTY 2 cut(s) 480, 1203
AcuI CTGAAG 2 cut(s) 140, 898
AfaI GTAC 3 cut(s) 140, 428, 964
AfiI CCNNNNNNNGG 5 cut(s) 117, 368, 423, 988, 1093
AgsI TTSAA 5 cut(s) 253, 298, 521, 621, 775
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 2 cut(s) 1148, 1244
AjuI GAANNNNNNNTTGG 4 cut(s) 641, 673, 1232, 1264
AloI GAACNNNNNNTCC 2 cut(s) 728, 760
AluBI AGCT 7 cut(s) 154, 569, 652, 889, 921, 1084, 1126
AluI AGCT 7 cut(s) 154, 569, 652, 889, 921, 1084, 1126
Alw21I GWGCWC 2 cut(s) 270, 282
Alw26I GTCTC 2 cut(s) 19, 165
AlwI GGATC 3 cut(s) 773, 902, 973
AlwNI CAGNNNCTG 1 cut(s) 532
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 2 cut(s) 99, 505
ApeKI GCWGC 3 cut(s) 59, 569, 1044
ApoI RAATTY 2 cut(s) 480, 1203
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
Asp700I GAANNNNTTC 1 cut(s) 740
AspLEI GCGC 1 cut(s) 1044
AspS9I GGNCC 2 cut(s) 506, 856
AsuC2I CCSGG 1 cut(s) 335
AsuHPI GGTGA 4 cut(s) 221, 341, 419, 479
AsuII TTCGAA 1 cut(s) 1019
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 1 cut(s) 856
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 2 cut(s) 270, 282
BbvI GCAGC 3 cut(s) 46, 556, 1056
BccI CCATC 8 cut(s) 84, 712, 869, 905, 943, 978, 1210, 1215
BceAI ACGGC 1 cut(s) 844
BcgI CGANNNNNNTGC 2 cut(s) 820, 854
BciT130I CCWGG 2 cut(s) 1150, 1246
BcnI CCSGG 1 cut(s) 335
BcoDI GTCTC 2 cut(s) 19, 165
BfaI CTAG 1 cut(s) 557
BfmI CTRYAG 1 cut(s) 1289
BfuAI ACCTGC 1 cut(s) 1032
BisI GCNGC 5 cut(s) 49, 57, 60, 570, 1045
BlsI GCNGC 5 cut(s) 50, 58, 61, 571, 1046
Bme1390I CCNGG 3 cut(s) 335, 1150, 1246
Bme18I GGWCC 1 cut(s) 856
BmeT110I CYCGRG 1 cut(s) 95
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 2 cut(s) 506, 856
BmiI GGNNCC 2 cut(s) 6, 37
BmrFI CCNGG 3 cut(s) 335, 1150, 1246
BmsI GCATC 3 cut(s) 337, 1179, 1194
BpiI GAAGAC 1 cut(s) 705
BpmI CTGGAG 2 cut(s) 145, 1028
Bpu14I TTCGAA 1 cut(s) 1019
BpuEI CTTGAG 5 cut(s) 254, 266, 495, 569, 1127
BpuMI CCSGG 1 cut(s) 335
BsaBI GATNNNNATC 2 cut(s) 722, 1225
BsaJI CCNNGG 3 cut(s) 194, 303, 747
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bsc4I CCNNNNNNNGG 5 cut(s) 117, 368, 423, 988, 1093
Bse118I RCCGGY 1 cut(s) 364
Bse1I ACTGG 2 cut(s) 402, 871
Bse3DI GCAATG 1 cut(s) 130
Bse8I GATNNNNATC 2 cut(s) 722, 1225
BseBI CCWGG 2 cut(s) 1150, 1246
BseDI CCNNGG 3 cut(s) 194, 303, 747
BseGI GGATG 2 cut(s) 970, 1226
BseJI GATNNNNATC 2 cut(s) 722, 1225
BseLI CCNNNNNNNGG 5 cut(s) 117, 368, 423, 988, 1093
BseMI GCAATG 1 cut(s) 130
BseMII CTCAG 2 cut(s) 723, 1026
BseNI ACTGG 2 cut(s) 402, 871
BseRI GAGGAG 1 cut(s) 1226
BseXI GCAGC 3 cut(s) 46, 556, 1056
BsgI GTGCAG 1 cut(s) 416
Bsh1236I CGCG 1 cut(s) 171
BshFI GGCC 2 cut(s) 101, 507
BshNI GGYRCC 1 cut(s) 35
BsiHKAI GWGCWC 2 cut(s) 270, 282
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 4 cut(s) 8, 39, 334, 365
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 5 cut(s) 117, 368, 423, 988, 1093
BsmAI GTCTC 2 cut(s) 19, 165
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 2 cut(s) 535, 1027
BsnI GGCC 2 cut(s) 101, 507
BsoBI CYCGRG 1 cut(s) 95
Bsp119I TTCGAA 1 cut(s) 1019
Bsp1286I GDGCHC 2 cut(s) 270, 282
Bsp143I GATC 6 cut(s) 682, 765, 779, 837, 907, 978
BspACI CCGC 3 cut(s) 48, 56, 368
BspANI GGCC 2 cut(s) 101, 507
BspCNI CTCAG 2 cut(s) 724, 1027
BspFNI CGCG 1 cut(s) 171
BspLI GGNNCC 2 cut(s) 6, 37
BspMAI CTGCAG 1 cut(s) 1293
BspMI ACCTGC 1 cut(s) 1032
BspPI GGATC 3 cut(s) 773, 902, 973
BspT104I TTCGAA 1 cut(s) 1019
BspT107I GGYRCC 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 364
BsrI ACTGG 2 cut(s) 402, 871
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 3 cut(s) 194, 303, 747
BssMI GATC 6 cut(s) 682, 765, 779, 837, 907, 978
BssT1I CCWWGG 2 cut(s) 194, 303
Bst2UI CCWGG 2 cut(s) 1150, 1246
Bst4CI ACNGT 1 cut(s) 1196
BstBI TTCGAA 1 cut(s) 1019
BstC8I GCNNGC 3 cut(s) 378, 612, 1056
BstDEI CTNAG 2 cut(s) 732, 1035
BstEII GGTNACC 1 cut(s) 329
BstF5I GGATG 2 cut(s) 970, 1226
BstFNI CGCG 1 cut(s) 171
BstHHI GCGC 1 cut(s) 1044
BstKTI GATC 6 cut(s) 685, 768, 782, 840, 910, 981
BstMAI GTCTC 2 cut(s) 19, 165
BstMBI GATC 6 cut(s) 682, 765, 779, 837, 907, 978
BstNI CCWGG 2 cut(s) 1150, 1246
BstNSI RCATGY 1 cut(s) 614
BstPI GGTNACC 1 cut(s) 329
BstSCI CCNGG 3 cut(s) 333, 1148, 1244
BstSFI CTRYAG 1 cut(s) 1289
BstUI CGCG 1 cut(s) 171
BstV1I GCAGC 3 cut(s) 46, 556, 1056
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 1 cut(s) 907
BstYI RGATCY 1 cut(s) 907
BsuRI GGCC 2 cut(s) 101, 507
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 2 cut(s) 970, 1226
BtsIMutI CAGTG 3 cut(s) 409, 428, 1201
BveI ACCTGC 1 cut(s) 1032
Cac8I GCNNGC 3 cut(s) 378, 612, 1056
CaiI CAGNNNCTG 1 cut(s) 532
CfoI GCGC 1 cut(s) 1044
Cfr10I RCCGGY 1 cut(s) 364
Cfr13I GGNCC 2 cut(s) 506, 856
CseI GACGC 2 cut(s) 177, 851
CsiI ACCWGGT 2 cut(s) 1148, 1244
Csp6I GTAC 3 cut(s) 139, 427, 963
CviAII CATG 2 cut(s) 611, 988
CviQI GTAC 3 cut(s) 139, 427, 963
DdeI CTNAG 2 cut(s) 732, 1035
DpnI GATC 6 cut(s) 684, 767, 781, 839, 909, 980
DpnII GATC 6 cut(s) 682, 765, 779, 837, 907, 978
DraI TTTAAA 1 cut(s) 358
Eco130I CCWWGG 2 cut(s) 194, 303
Eco147I AGGCCT 1 cut(s) 101
Eco47I GGWCC 1 cut(s) 856
Eco57I CTGAAG 2 cut(s) 140, 898
Eco88I CYCGRG 1 cut(s) 95
Eco91I GGTNACC 1 cut(s) 329
EcoO109I RGGNCCY 1 cut(s) 506
EcoO65I GGTNACC 1 cut(s) 329
EcoRI GAATTC 1 cut(s) 480
EcoRII CCWGG 2 cut(s) 1148, 1244
EcoT14I CCWWGG 2 cut(s) 194, 303
ErhI CCWWGG 2 cut(s) 194, 303
FaeI CATG 2 cut(s) 614, 991
FaqI GGGAC 1 cut(s) 221
FatI CATG 2 cut(s) 610, 987
FauI CCCGC 1 cut(s) 361
FauNDI CATATG 1 cut(s) 1049
Fnu4HI GCNGC 5 cut(s) 49, 57, 60, 570, 1045
FokI GGATG 2 cut(s) 957, 1233
Fsp4HI GCNGC 5 cut(s) 49, 57, 60, 570, 1045
FspBI CTAG 1 cut(s) 557
FspI TGCGCA 1 cut(s) 1043
GlaI GCGC 1 cut(s) 1043
GluI GCNGC 5 cut(s) 49, 57, 60, 570, 1045
GsuI CTGGAG 2 cut(s) 145, 1028
HaeIII GGCC 2 cut(s) 101, 507
HapII CCGG 4 cut(s) 8, 39, 334, 365
HgaI GACGC 2 cut(s) 177, 851
HhaI GCGC 1 cut(s) 1044
Hin1II CATG 2 cut(s) 614, 991
Hin6I GCGC 1 cut(s) 1042
HinP1I GCGC 1 cut(s) 1042
HindIII AAGCTT 3 cut(s) 152, 650, 919
HinfI GANTC 3 cut(s) 107, 632, 1276
HpaII CCGG 4 cut(s) 8, 39, 334, 365
HphI GGTGA 4 cut(s) 221, 341, 419, 479
Hpy188I TCNGA 6 cut(s) 106, 187, 577, 748, 917, 1036
Hpy188III TCNNGA 8 cut(s) 124, 215, 485, 542, 604, 775, 1007, 1280
Hpy99I CGWCG 5 cut(s) 171, 314, 605, 830, 845
HpyAV CCTTC 6 cut(s) 234, 442, 589, 756, 922, 1132
HpyCH4III ACNGT 1 cut(s) 1196
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 9 cut(s) 263, 397, 535, 552, 614, 863, 1027, 1170, 1291
HpyF3I CTNAG 2 cut(s) 732, 1035
HpySE526I ACGT 1 cut(s) 276
Hsp92II CATG 2 cut(s) 614, 991
HspAI GCGC 1 cut(s) 1042
Kzo9I GATC 6 cut(s) 682, 765, 779, 837, 907, 978
LmnI GCTCC 2 cut(s) 10, 1089
Lsp1109I GCAGC 3 cut(s) 46, 556, 1056
LweI GCATC 3 cut(s) 337, 1179, 1194
MabI ACCWGGT 2 cut(s) 1148, 1244
MaeI CTAG 1 cut(s) 557
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 3 cut(s) 329, 467, 1196
MalI GATC 6 cut(s) 684, 767, 781, 839, 909, 980
MbiI CCGCTC 1 cut(s) 48
MboI GATC 6 cut(s) 682, 765, 779, 837, 907, 978
MboII GAAGA 5 cut(s) 422, 710, 895, 1023, 1249
MflI RGATCY 1 cut(s) 907
MhlI GDGCHC 2 cut(s) 270, 282
MluCI AATT 5 cut(s) 480, 615, 790, 813, 1203
MlyI GAGTC 2 cut(s) 101, 1285
MmeI TCCRAC 1 cut(s) 906
MroXI GAANNNNTTC 1 cut(s) 740
MseI TTAA 3 cut(s) 357, 801, 1080
MspI CCGG 4 cut(s) 8, 39, 334, 365
MspR9I CCNGG 3 cut(s) 335, 1150, 1246
Mva1269I GAATGC 2 cut(s) 535, 1027
MvaI CCWGG 2 cut(s) 1150, 1246
MvnI CGCG 1 cut(s) 171
NciI CCSGG 1 cut(s) 335
NdeI CATATG 1 cut(s) 1049
NdeII GATC 6 cut(s) 682, 765, 779, 837, 907, 978
NlaIII CATG 2 cut(s) 614, 991
NlaIV GGNNCC 2 cut(s) 6, 37
NmuCI GTSAC 3 cut(s) 329, 467, 1196
NsbI TGCGCA 1 cut(s) 1043
NspI RCATGY 1 cut(s) 614
NspV TTCGAA 1 cut(s) 1019
PaeI GCATGC 1 cut(s) 614
PaeR7I CTCGAG 1 cut(s) 95
PceI AGGCCT 1 cut(s) 101
PctI GAATGC 2 cut(s) 535, 1027
PdmI GAANNNNTTC 1 cut(s) 740
PfeI GAWTC 1 cut(s) 632
PflMI CCANNNNNTGG 1 cut(s) 423
PkrI GCNGC 5 cut(s) 50, 58, 61, 571, 1046
PleI GAGTC 2 cut(s) 101, 1284
PpsI GAGTC 2 cut(s) 101, 1284
Psp6I CCWGG 2 cut(s) 1148, 1244
PspEI GGTNACC 1 cut(s) 329
PspGI CCWGG 2 cut(s) 1148, 1244
PspN4I GGNNCC 2 cut(s) 6, 37
PspPI GGNCC 2 cut(s) 506, 856
PspXI VCTCGAGB 1 cut(s) 95
PstI CTGCAG 1 cut(s) 1293
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 1 cut(s) 907
RsaI GTAC 3 cut(s) 140, 428, 964
RsaNI GTAC 3 cut(s) 139, 427, 963
SaqAI TTAA 3 cut(s) 357, 801, 1080
SatI GCNGC 5 cut(s) 49, 57, 60, 570, 1045
Sau3AI GATC 6 cut(s) 682, 765, 779, 837, 907, 978
Sau96I GGNCC 2 cut(s) 506, 856
SchI GAGTC 2 cut(s) 101, 1285
ScrFI CCNGG 3 cut(s) 335, 1150, 1246
SduI GDGCHC 2 cut(s) 270, 282
SexAI ACCWGGT 2 cut(s) 1148, 1244
SfaNI GCATC 3 cut(s) 337, 1179, 1194
SfcI CTRYAG 1 cut(s) 1289
Sfr274I CTCGAG 1 cut(s) 95
SfuI TTCGAA 1 cut(s) 1019
SgrAI CRCCGGYG 1 cut(s) 364
SinI GGWCC 1 cut(s) 856
SlaI CTCGAG 1 cut(s) 95
SmlI CTYRAG 6 cut(s) 95, 233, 281, 510, 584, 1106
SmoI CTYRAG 6 cut(s) 95, 233, 281, 510, 584, 1106
SphI GCATGC 1 cut(s) 614
Sse9I AATT 5 cut(s) 480, 615, 790, 813, 1203
SseBI AGGCCT 1 cut(s) 101
SsiI CCGC 3 cut(s) 48, 56, 368
SspMI CTAG 1 cut(s) 557
StuI AGGCCT 1 cut(s) 101
StyD4I CCNGG 3 cut(s) 333, 1148, 1244
StyI CCWWGG 2 cut(s) 194, 303
TaaI ACNGT 1 cut(s) 1196
TaiI ACGT 1 cut(s) 279
TaqI TCGA 9 cut(s) 96, 166, 312, 435, 630, 693, 840, 1019, 1060
TasI AATT 5 cut(s) 480, 615, 790, 813, 1203
TauI GCSGC 2 cut(s) 51, 59
TfiI GAWTC 1 cut(s) 632
Tru1I TTAA 3 cut(s) 357, 801, 1080
Tru9I TTAA 3 cut(s) 357, 801, 1080
TscAI CASTG 3 cut(s) 409, 428, 1201
TseFI GTSAC 3 cut(s) 329, 467, 1196
TseI GCWGC 3 cut(s) 59, 569, 1044
Tsp45I GTSAC 3 cut(s) 329, 467, 1196
TspDTI ATGAA 1 cut(s) 1151
TspGWI ACGGA 1 cut(s) 825
TspRI CASTG 3 cut(s) 409, 428, 1201
Van91I CCANNNNNTGG 1 cut(s) 423
VpaK11BI GGWCC 1 cut(s) 856
XapI RAATTY 2 cut(s) 480, 1203
XceI RCATGY 1 cut(s) 614
XhoI CTCGAG 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 740
XspI CTAG 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.