Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002931

Physical Location & Seq

Genomic Coordinates Forward (+)

4072252 .. 4076042

Gene Structure 3791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0053100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGAAGAAGAAGACCACTCTCTTTGATTTTTCTCTTCTTCTCCTCACTACTGCTTTCTTCTTTGCTTCTACACTCTCATCATCCAGCCACATTATCAGCCATGGAAGTCTCACCGACGCCGAGGCCCTCTACATCAAGCAGCGCCAGCTGCTCTACTACCGGGACGAGTTCGGCGACCGGGGAGAGATGGTGAAAGTAGACCCTTCTCTGGTTTTTGAAAACAAGAGACTCCGAAATGCTTACATAGCATTGCAAGCTTGGAAGGAGGCTATTCTCTCCGACCCTTTCAATCTCACCGGGGATTGGGTCGGATCTAATGTCTGCAACTACACTGGAGTGTTCTGTGCTCCGGCGCCCGACAACAGCTCGATCCGAACCGTCGCCGGCATTGACCTCAACCACGGCGATATTGCTGGCTACTTGCCGGAGGAGCTTGGGCTGCTCACAGATCTCGCATTGTTCCACATCAATTCCAACAGGTTCTGTGGGACTGTGCCGCACAAATTCCGGTACCTGAAGCTGCTTTTCGAGCTCGATATCAGTAACAATCGATTTGCCGGTAAGTTCCCGCATGTTGTGCTTAAGCTTCCTGAGCTGAAATTCTTGGATCTGAGGTTCAATGAGTTCGAGGGGACTGTGCCCAAGGAGCTGTTTGACAAGGACCTGGATGCTATTTTCATCAACCATAACCGGTTCAGGTTCGATCTGCCGGATAATTTCGGGAACTCGCCGGTCTCCGTCATCGTTCTGGCCAACAACAAGTTCCACGGCTGCGTTCCTTCCAGCCTGGGCAACATGTCGAACCTGAACGAGATCATTATGATGAACAATGGGTTCAGGTCGTGCTTGCCGGAGGAGATTGGGATGCTGAAGAACTTGACGGTGTTCGACGTCAGCTACAATCAGTTCTTGGGTTCGCTGCCGGACACAATTGGAGGGATGGTGAGCCTTGAGCAGCTCAATGTGGCTCATAACTTGCTGTCTGGGTCGATTCCGCCGGCTATTTGCACGTTGCCGAGGCTGGAGAACTTCACTTACTCTTATAACTTCTTCACCGGCGAGCCTCCGGTGTGTCTGGCCTTGCCTGGTTTCGATGACAAGCGGAATTGCTTGCCGAATAGGCCCTTACAGAGGTCGGCGGCGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGAATTGCAATTCTTTTGGTTGTAAGCCTTTCACTCCTTCACCTACTCCCTCAATTCCTGTTCCTTCACCTCCGGTTGTGACTCCCTCGCCGCCGATCTTTATACCCCAATCACCACCACCTCCGCCGCCCCCACCTCCTCCCCCAGTTTCCTCACCCCCACCTCCTCCGCCGTCTCCGCCACCACCGCCGCCGCCATCACCTCCACCCCCAGTTTTCTCACCACCGCCTCCACCAGTTTACTCTCCACCACCGCCTCCACCCTCACCTCCTCCCCCAGTTTACTCACCACCTCCACCACCACCCTCACCTCCGCCGCCAGTTTACTTACCACCACCACCACCACCACCTCCGCCACCATCACCTCCCCCGCCAGTTTCCTTGCCGCCACCTTCTCCACCCCCACCATCACCACCTCCACCTTCAGTCTCACCGCCATATTGCGTCCGTTCCCCACCACCACCGCCCCCAAATTCACCTCCACCGCCTTCTCCATTGAGTTCTCCACCTCCACCAGCTCCTTACGTATACTACTCACCCCCGCCTCCTACTCCACATTCACCACCGCCACCACCACATTCACCACCACCACCAATTTATCCTTACTCATCACCTCCACCTCCACCACCTGTCCATTCCCCACCTCCCCCTTCCCCACCTCCTTGTATAGAACCGCCTCCACCACCACCTCCTTGCATTGAATTACCCCCACCGCCGCCCCCACCACCGCCATCACCACCACCATGTCCAGAGTCCTCGCCACCACCACCACCTCCCTACCATCACTTACCACCACCATCTCCTTCACCGCCACCAACACCAGTGTATGAGTCTCCTCCCCCACCTCTGGTCCACCATTCACCACCTCCGGTCCACCACCATTCACCACCACCACCGGTTTATCAATACAGTTCTCCACCGCCACCAAATTCACCTCCATGTGTTGAAGCAAGCCCACCGCCTCCCACTCCTGTATATGAGGGCCCATTGCCACCAGTCTTTGGAGTTTCATACGCGTCTCCTCCGCCACCACCCTTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004497 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009626 GO:0009627 GO:0009628 GO:0009814 GO:0009870 GO:0009987 GO:0010204 GO:0012501 GO:0016491 GO:0023052 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0036293 GO:0036294 GO:0042221 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00982 ko01120 map00982 map01120

Pfam Domains

Protein Families

FMO-like

Protein Analysis

737

Amino Acids

79.27

Weight (kDa)

6.16

Isoelectric Point (pI)

100.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19250 AT5G45180
fragaria_vesca	FvH4_1g09240 FvH4_2g37000
malus_domestica	MD02G1099600.v1.1 MD08G1046700.v1.1 MD08G1046800.v1.1 MD15G1047200.v1.1 MD15G1222400.v1.1
prunus_persica	Prupe.1G401400_v2.0.a1 Prupe.7G193500_v2.0.a1
pyrus_communis	pycom02g07750 pycom08g03910 pycom08g03920 pycom15g04540 pycom15g04600
rosa_chinensis	RchiOBHm_Chr2g0095771 RchiOBHm_Chr6g0304751
rosa_laevigata	RLG00000010953 RLG00000016591
rosa_multiflora	Rmu_co8416307.1_g000001 Rmu_sc0031036.1_g000001 Rmu_ssc0000139.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146110 Rroxscaffold_7G00163530
rosa_rugosa	Rorug02G0053100 Rorug06G0334200
rosa_samantha	Rh2AG101500 Rh2AG101600 Rh2BG103200 Rh2CG105500 Rh2DG102900 Rh6AG446100 Rh6BG455500 Rh6CG459500 Rh6DG446400
rosa_wichuraiana	Rw2G007710 Rw6G038810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1044
AatII	GACGTC	1 cut(s)	894
Acc65I	GGTACC	1 cut(s)	510
AccB1I	GGYRCC	2 cut(s)	352, 510
AccB7I	CCANNNNNTGG	1 cut(s)	2171
AccI	GTMKAC	2 cut(s)	198, 1698
AccII	CGCG	1 cut(s)	2186
AclWI	GGATC	3 cut(s)	319, 364, 615
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	4 cut(s)	503, 599, 1642, 2098
AcuI	CTGAAG	3 cut(s)	536, 890, 1578
AcyI	GRCGYC	3 cut(s)	117, 353, 891
AfaI	GTAC	1 cut(s)	512
AfiI	CCNNNNNNNGG	5 cut(s)	208, 303, 1131, 2017, 2171
AflII	CTTAAG	1 cut(s)	581
AflIII	ACRYGT	2 cut(s)	795, 2184
AgeI	ACCGGT	2 cut(s)	690, 2065
AgsI	TTSAA	5 cut(s)	218, 289, 619, 1871, 2117
AjnI	CCWGG	3 cut(s)	663, 786, 1084
AjuI	GAANNNNNNNTTGG	2 cut(s)	746, 778
AleI	CACNNNNGTG	1 cut(s)	335
AloI	GAACNNNNNNTCC	2 cut(s)	599, 631
Alw21I	GWGCWC	2 cut(s)	349, 534
Alw26I	GTCTC	7 cut(s)	113, 220, 739, 1350, 1603, 2007, 2193
AlwI	GGATC	3 cut(s)	319, 364, 615
AlwNI	CAGNNNCTG	1 cut(s)	483
AoxI	GGCC	5 cut(s)	123, 750, 1077, 1121, 2152
ApaI	GGGCCC	1 cut(s)	2156
ApeKI	GCWGC	7 cut(s)	139, 148, 439, 520, 771, 919, 955
ApoI	RAATTY	4 cut(s)	503, 599, 1642, 2098
AsiGI	ACCGGT	2 cut(s)	690, 2065
Asp718I	GGTACC	1 cut(s)	510
AspLEI	GCGC	3 cut(s)	144, 355, 1144
AspS9I	GGNCC	7 cut(s)	124, 661, 1122, 2020, 2041, 2152, 2153
AsuC2I	CCSGG	3 cut(s)	161, 179, 298
AvaII	GGWCC	3 cut(s)	661, 2020, 2041
BaeGI	GKGCMC	2 cut(s)	642, 2156
BalI	TGGCCA	1 cut(s)	752
BanI	GGYRCC	2 cut(s)	352, 510
BanII	GRGCYC	2 cut(s)	534, 2156
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	2 cut(s)	349, 534
BbvI	GCAGC	7 cut(s)	135, 151, 426, 507, 758, 906, 967
BccI	CCATC	8 cut(s)	181, 934, 1375, 1537, 1585, 1909, 1959, 1975
BceAI	ACGGC	3 cut(s)	418, 784, 1327
BciT130I	CCWGG	3 cut(s)	665, 788, 1086
BcnI	CCSGG	3 cut(s)	161, 179, 298
BcoDI	GTCTC	7 cut(s)	113, 220, 739, 1350, 1603, 2007, 2193
BfoI	RGCGCY	2 cut(s)	145, 356
BfrI	CTTAAG	1 cut(s)	581
BglI	GCCNNNNNGGC	1 cut(s)	1120
BglII	AGATCT	1 cut(s)	448
Bme1390I	CCNGG	6 cut(s)	161, 179, 298, 665, 788, 1086
Bme18I	GGWCC	3 cut(s)	661, 2020, 2041
BmgT120I	GGNCC	7 cut(s)	124, 661, 1122, 2020, 2041, 2152, 2153
BmiI	GGNNCC	3 cut(s)	354, 512, 2154
BmrFI	CCNGG	6 cut(s)	161, 179, 298, 665, 788, 1086
BmrI	ACTGGG	3 cut(s)	1310, 1376, 1442
BmsI	GCATC	2 cut(s)	658, 855
BmuI	ACTGGG	3 cut(s)	1310, 1376, 1442
BpiI	GAAGAC	1 cut(s)	17
BpmI	CTGGAG	2 cut(s)	354, 1043
Bpu10I	CCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	971
BpuMI	CCSGG	3 cut(s)	161, 179, 298
Bsa29I	ATCGAT	1 cut(s)	550
BsaAI	YACGTR	1 cut(s)	1696
BsaHI	GRCGYC	3 cut(s)	117, 353, 891
BsaI	GGTCTC	1 cut(s)	739
BsaJI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BsaWI	WCCGGW	6 cut(s)	507, 690, 1066, 1243, 2038, 2065
BsaXI	ACNNNNNCTCC	4 cut(s)	174, 204, 927, 957
Bsc4I	CCNNNNNNNGG	5 cut(s)	208, 303, 1131, 2017, 2171
Bse118I	RCCGGY	7 cut(s)	383, 557, 690, 730, 997, 1055, 2065
Bse1I	ACTGG	9 cut(s)	337, 1316, 1382, 1406, 1448, 1490, 1544, 1991, 2165
Bse3DI	GCAATG	3 cut(s)	248, 1151, 2156
BseBI	CCWGG	3 cut(s)	665, 788, 1086
BseCI	ATCGAT	1 cut(s)	550
BseDI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BseGI	GGATG	4 cut(s)	80, 673, 870, 945
BseLI	CCNNNNNNNGG	5 cut(s)	208, 303, 1131, 2017, 2171
BseMI	GCAATG	3 cut(s)	248, 1151, 2156
BseMII	CTCAG	2 cut(s)	582, 602
BseNI	ACTGG	9 cut(s)	337, 1316, 1382, 1406, 1448, 1490, 1544, 1991, 2165
BseRI	GAGGAG	8 cut(s)	32, 443, 869, 1299, 1326, 1431, 1995, 2181
BseSI	GKGCMC	2 cut(s)	642, 2156
BseXI	GCAGC	7 cut(s)	135, 151, 426, 507, 758, 906, 967
Bsh1236I	CGCG	1 cut(s)	2186
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2154
BshNI	GGYRCC	2 cut(s)	352, 510
BshTI	ACCGGT	2 cut(s)	690, 2065
BshVI	ATCGAT	1 cut(s)	550
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	2 cut(s)	349, 534
BslFI	GGGAC	3 cut(s)	176, 502, 646
BslI	CCNNNNNNNGG	5 cut(s)	208, 303, 1131, 2017, 2171
BsmAI	GTCTC	7 cut(s)	113, 220, 739, 1350, 1603, 2007, 2193
BsmBI	CGTCTC	2 cut(s)	1350, 2193
BsmFI	GGGAC	3 cut(s)	176, 502, 646
BsnI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2154
Bso31I	GGTCTC	1 cut(s)	739
Bsp120I	GGGCCC	1 cut(s)	2152
Bsp1286I	GDGCHC	4 cut(s)	349, 534, 642, 2156
Bsp143I	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
Bsp19I	CCATGG	1 cut(s)	100
BspANI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2154
BspCNI	CTCAG	2 cut(s)	583, 603
BspDI	ATCGAT	1 cut(s)	550
BspFNI	CGCG	1 cut(s)	2186
BspLI	GGNNCC	3 cut(s)	354, 512, 2154
BspPI	GGATC	3 cut(s)	319, 364, 615
BspT107I	GGYRCC	2 cut(s)	352, 510
BspTI	CTTAAG	1 cut(s)	581
BspTNI	GGTCTC	1 cut(s)	739
BsrDI	GCAATG	3 cut(s)	248, 1151, 2156
BsrFI	RCCGGY	7 cut(s)	383, 557, 690, 730, 997, 1055, 2065
BsrI	ACTGG	9 cut(s)	337, 1316, 1382, 1406, 1448, 1490, 1544, 1991, 2165
BssAI	RCCGGY	7 cut(s)	383, 557, 690, 730, 997, 1055, 2065
BssECI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BssMI	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
BssNAI	GTATAC	1 cut(s)	1699
BssNI	GRCGYC	3 cut(s)	117, 353, 891
BssT1I	CCWWGG	2 cut(s)	100, 642
Bst1107I	GTATAC	1 cut(s)	1699
Bst2UI	CCWGG	3 cut(s)	665, 788, 1086
Bst4CI	ACNGT	5 cut(s)	379, 493, 637, 883, 2081
Bst6I	CTCTTC	1 cut(s)	39
BstACI	GRCGYC	3 cut(s)	117, 353, 891
BstAFI	CTTAAG	1 cut(s)	581
BstAPI	GCANNNNNTGC	1 cut(s)	577
BstBAI	YACGTR	1 cut(s)	1696
BstC8I	GCNNGC	9 cut(s)	146, 255, 385, 415, 848, 999, 1061, 1112, 2122
BstDEI	CTNAG	3 cut(s)	591, 611, 1164
BstDSI	CCRYGG	3 cut(s)	100, 400, 766
BstENI	CCTNNNNNAGG	1 cut(s)	1129
BstF5I	GGATG	4 cut(s)	80, 673, 870, 945
BstFNI	CGCG	1 cut(s)	2186
BstH2I	RGCGCY	2 cut(s)	145, 356
BstHHI	GCGC	3 cut(s)	144, 355, 1144
BstKTI	GATC	7 cut(s)	314, 372, 451, 610, 706, 816, 1269
BstMAI	GTCTC	7 cut(s)	113, 220, 739, 1350, 1603, 2007, 2193
BstMBI	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
BstMCI	CGRYCG	1 cut(s)	178
BstNI	CCWGG	3 cut(s)	665, 788, 1086
BstNSI	RCATGY	2 cut(s)	575, 799
BstSCI	CCNGG	6 cut(s)	159, 177, 296, 663, 786, 1084
BstSLI	GKGCMC	2 cut(s)	642, 2156
BstSNI	TACGTA	1 cut(s)	1696
BstUI	CGCG	1 cut(s)	2186
BstV1I	GCAGC	7 cut(s)	135, 151, 426, 507, 758, 906, 967
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	3 cut(s)	311, 448, 607
BstYI	RGATCY	3 cut(s)	311, 448, 607
BstZ17I	GTATAC	1 cut(s)	1699
Bsu15I	ATCGAT	1 cut(s)	550
BsuRI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2154
BsuTUI	ATCGAT	1 cut(s)	550
BtgI	CCRYGG	3 cut(s)	100, 400, 766
BtsCI	GGATG	4 cut(s)	80, 673, 870, 945
BtsIMutI	CAGTG	2 cut(s)	330, 1998
Cac8I	GCNNGC	9 cut(s)	146, 255, 385, 415, 848, 999, 1061, 1112, 2122
CaiI	CAGNNNCTG	1 cut(s)	483
CfoI	GCGC	3 cut(s)	144, 355, 1144
Cfr10I	RCCGGY	7 cut(s)	383, 557, 690, 730, 997, 1055, 2065
Cfr13I	GGNCC	7 cut(s)	124, 661, 1122, 2020, 2041, 2152, 2153
ClaI	ATCGAT	1 cut(s)	550
CseI	GACGC	3 cut(s)	125, 1603, 2175
Csp6I	GTAC	1 cut(s)	511
CspAI	ACCGGT	2 cut(s)	690, 2065
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviAII	CATG	5 cut(s)	101, 572, 796, 1914, 2109
CviQI	GTAC	1 cut(s)	511
DdeI	CTNAG	3 cut(s)	591, 611, 1164
DinI	GGCGCC	1 cut(s)	354
DpnI	GATC	7 cut(s)	313, 371, 450, 609, 705, 815, 1268
DpnII	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
EaeI	YGGCCR	1 cut(s)	750
Eam1104I	CTCTTC	1 cut(s)	39
EarI	CTCTTC	1 cut(s)	39
EciI	GGCGGA	7 cut(s)	984, 1284, 1329, 1338, 1473, 1512, 2184
Ecl136II	GAGCTC	1 cut(s)	532
Eco105I	TACGTA	1 cut(s)	1696
Eco130I	CCWWGG	2 cut(s)	100, 642
Eco24I	GRGCYC	2 cut(s)	534, 2156
Eco31I	GGTCTC	1 cut(s)	739
Eco32I	GATATC	1 cut(s)	538
Eco47I	GGWCC	3 cut(s)	661, 2020, 2041
Eco53kI	GAGCTC	1 cut(s)	532
Eco57I	CTGAAG	3 cut(s)	536, 890, 1578
EcoICRI	GAGCTC	1 cut(s)	532
EcoNI	CCTNNNNNAGG	1 cut(s)	1129
EcoO109I	RGGNCCY	4 cut(s)	124, 661, 1122, 2152
EcoRII	CCWGG	3 cut(s)	663, 786, 1084
EcoRV	GATATC	1 cut(s)	538
EcoT14I	CCWWGG	2 cut(s)	100, 642
EcoT38I	GRGCYC	2 cut(s)	534, 2156
EgeI	GGCGCC	1 cut(s)	354
EheI	GGCGCC	1 cut(s)	354
ErhI	CCWWGG	2 cut(s)	100, 642
Esp3I	CGTCTC	2 cut(s)	1350, 2193
FaeI	CATG	5 cut(s)	104, 575, 799, 1917, 2112
FalI	AAGNNNNNCTT	2 cut(s)	1142, 1174
FaqI	GGGAC	3 cut(s)	176, 502, 646
FatI	CATG	5 cut(s)	100, 571, 795, 1913, 2108
FauI	CCCGC	3 cut(s)	576, 1548, 1719
FblI	GTMKAC	2 cut(s)	198, 1698
FokI	GGATG	4 cut(s)	67, 680, 877, 952
FriOI	GRGCYC	2 cut(s)	534, 2156
GlaI	GCGC	3 cut(s)	143, 354, 1143
GsuI	CTGGAG	2 cut(s)	354, 1043
HaeII	RGCGCY	2 cut(s)	145, 356
HaeIII	GGCC	5 cut(s)	125, 752, 1079, 1123, 2154
HgaI	GACGC	3 cut(s)	125, 1603, 2175
HhaI	GCGC	3 cut(s)	144, 355, 1144
Hin1I	GRCGYC	3 cut(s)	117, 353, 891
Hin1II	CATG	5 cut(s)	104, 575, 799, 1917, 2112
Hin6I	GCGC	3 cut(s)	142, 353, 1142
HinP1I	GCGC	3 cut(s)	142, 353, 1142
HindIII	AAGCTT	2 cut(s)	255, 584
HinfI	GANTC	5 cut(s)	228, 991, 1252, 1922, 2000
Hpy166II	GTNNAC	7 cut(s)	199, 1411, 1453, 1495, 1699, 2023, 2044
Hpy188I	TCNGA	5 cut(s)	233, 280, 311, 374, 612
Hpy188III	TCNNGA	3 cut(s)	590, 721, 1919
Hpy8I	GTNNAC	7 cut(s)	199, 1411, 1453, 1495, 1699, 2023, 2044
Hpy99I	CGWCG	3 cut(s)	119, 383, 893
HpyCH4III	ACNGT	5 cut(s)	379, 493, 637, 883, 2081
HpyCH4IV	ACGT	3 cut(s)	891, 1010, 1695
HpyCH4V	TGCA	5 cut(s)	253, 324, 1008, 1179, 1866
HpyF3I	CTNAG	3 cut(s)	591, 611, 1164
HpySE526I	ACGT	3 cut(s)	891, 1010, 1695
Hsp92I	GRCGYC	3 cut(s)	117, 353, 891
Hsp92II	CATG	5 cut(s)	104, 575, 799, 1917, 2112
HspAI	GCGC	3 cut(s)	142, 353, 1142
KasI	GGCGCC	1 cut(s)	352
KpnI	GGTACC	1 cut(s)	514
KroI	GCCGGC	2 cut(s)	383, 997
KroNI	GCCGGC	2 cut(s)	385, 999
Kzo9I	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
LmnI	GCTCC	4 cut(s)	352, 430, 646, 1693
Lsp1109I	GCAGC	7 cut(s)	135, 151, 426, 507, 758, 906, 967
LweI	GCATC	2 cut(s)	658, 855
MaeII	ACGT	3 cut(s)	891, 1010, 1695
MaeIII	GTNAC	2 cut(s)	542, 1249
MalI	GATC	7 cut(s)	313, 371, 450, 609, 705, 815, 1268
MboI	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
MboII	GAAGA	8 cut(s)	16, 19, 22, 26, 29, 49, 883, 1042
MfeI	CAATTG	1 cut(s)	930
MflI	RGATCY	3 cut(s)	311, 448, 607
MhlI	GDGCHC	4 cut(s)	349, 534, 642, 2156
MlsI	TGGCCA	1 cut(s)	752
MluI	ACGCGT	1 cut(s)	2184
MluNI	TGGCCA	1 cut(s)	752
Mly113I	GGCGCC	1 cut(s)	353
MlyI	GAGTC	4 cut(s)	222, 1246, 1931, 2009
MmeI	TCCRAC	3 cut(s)	289, 303, 498
Mox20I	TGGCCA	1 cut(s)	752
MroNI	GCCGGC	2 cut(s)	383, 997
MscI	TGGCCA	1 cut(s)	752
MseI	TTAA	1 cut(s)	582
MslI	CAYNNNNRTG	4 cut(s)	335, 821, 1912, 2107
Msp20I	TGGCCA	1 cut(s)	752
MspA1I	CMGCKG	1 cut(s)	148
MspCI	CTTAAG	1 cut(s)	581
MspR9I	CCNGG	6 cut(s)	161, 179, 298, 665, 788, 1086
MunI	CAATTG	1 cut(s)	930
MvaI	CCWGG	3 cut(s)	665, 788, 1086
MvnI	CGCG	1 cut(s)	2186
NaeI	GCCGGC	2 cut(s)	385, 999
NarI	GGCGCC	1 cut(s)	353
NciI	CCSGG	3 cut(s)	161, 179, 298
NcoI	CCATGG	1 cut(s)	100
NdeII	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
NgoMIV	GCCGGC	2 cut(s)	383, 997
NlaIII	CATG	5 cut(s)	104, 575, 799, 1917, 2112
NlaIV	GGNNCC	3 cut(s)	354, 512, 2154
NmeAIII	GCCGAG	2 cut(s)	145, 1041
NmuCI	GTSAC	1 cut(s)	1249
NspI	RCATGY	2 cut(s)	575, 799
OliI	CACNNNNGTG	1 cut(s)	335
PciI	ACATGT	1 cut(s)	795
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdiI	GCCGGC	2 cut(s)	385, 999
PfeI	GAWTC	1 cut(s)	991
PflMI	CCANNNNNTGG	1 cut(s)	2171
PinAI	ACCGGT	2 cut(s)	690, 2065
PleI	GAGTC	4 cut(s)	222, 1246, 1930, 2008
PluTI	GGCGCC	1 cut(s)	356
PpsI	GAGTC	4 cut(s)	222, 1246, 1930, 2008
Ppu21I	YACGTR	1 cut(s)	1696
PpuMI	RGGWCCY	1 cut(s)	661
PscI	ACATGT	1 cut(s)	795
PsiI	TTATAA	1 cut(s)	1044
Psp124BI	GAGCTC	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	661
Psp6I	CCWGG	3 cut(s)	663, 786, 1084
PspGI	CCWGG	3 cut(s)	663, 786, 1084
PspN4I	GGNNCC	3 cut(s)	354, 512, 2154
PspOMI	GGGCCC	1 cut(s)	2152
PspPI	GGNCC	7 cut(s)	124, 661, 1122, 2020, 2041, 2152, 2153
PspPPI	RGGWCCY	1 cut(s)	661
PsrI	GAACNNNNNNTAC	2 cut(s)	1019, 1051
PstNI	CAGNNNCTG	1 cut(s)	483
PsuI	RGATCY	3 cut(s)	311, 448, 607
PvuII	CAGCTG	1 cut(s)	148
RsaI	GTAC	1 cut(s)	512
RsaNI	GTAC	1 cut(s)	511
RseI	CAYNNNNRTG	4 cut(s)	335, 821, 1912, 2107
SacI	GAGCTC	1 cut(s)	534
SaqAI	TTAA	1 cut(s)	582
Sau3AI	GATC	7 cut(s)	311, 369, 448, 607, 703, 813, 1266
Sau96I	GGNCC	7 cut(s)	124, 661, 1122, 2020, 2041, 2152, 2153
SchI	GAGTC	4 cut(s)	222, 1246, 1931, 2009
ScrFI	CCNGG	6 cut(s)	161, 179, 298, 665, 788, 1086
SduI	GDGCHC	4 cut(s)	349, 534, 642, 2156
SfaNI	GCATC	2 cut(s)	658, 855
SfoI	GGCGCC	1 cut(s)	354
SgrAI	CRCCGGYG	1 cut(s)	1055
SinI	GGWCC	3 cut(s)	661, 2020, 2041
SmiMI	CAYNNNNRTG	4 cut(s)	335, 821, 1912, 2107
SmlI	CTYRAG	2 cut(s)	581, 950
SmoI	CTYRAG	2 cut(s)	581, 950
SnaBI	TACGTA	1 cut(s)	1696
SspDI	GGCGCC	1 cut(s)	352
SstI	GAGCTC	1 cut(s)	534
StyD4I	CCNGG	6 cut(s)	159, 177, 296, 663, 786, 1084
StyI	CCWWGG	2 cut(s)	100, 642
TaaI	ACNGT	5 cut(s)	379, 493, 637, 883, 2081
TaiI	ACGT	3 cut(s)	894, 1013, 1698
TauI	GCSGC	9 cut(s)	499, 1142, 1264, 1300, 1363, 1366, 1489, 1558, 1888
TfiI	GAWTC	1 cut(s)	991
Tru1I	TTAA	1 cut(s)	582
Tru9I	TTAA	1 cut(s)	582
TscAI	CASTG	2 cut(s)	337, 1998
TseFI	GTSAC	1 cut(s)	1249
TseI	GCWGC	7 cut(s)	139, 148, 439, 520, 771, 919, 955
Tsp45I	GTSAC	1 cut(s)	1249
TspDTI	ATGAA	4 cut(s)	17, 667, 839, 2169
TspGWI	ACGGA	2 cut(s)	727, 1607
TspRI	CASTG	2 cut(s)	337, 1998
Van91I	CCANNNNNTGG	1 cut(s)	2171
Vha464I	CTTAAG	1 cut(s)	581
VpaK11BI	GGWCC	3 cut(s)	661, 2020, 2041
XagI	CCTNNNNNAGG	1 cut(s)	1129
XapI	RAATTY	4 cut(s)	503, 599, 1642, 2098
XceI	RCATGY	2 cut(s)	575, 799
XmiI	GTMKAC	2 cut(s)	198, 1698
ZraI	GACGTC	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.