FvH4_1g09270

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0003315
Physical Location & Seq
Reverse (-)
4945298 .. 4950210
4913 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g09270.t3

Sequence Viewer

Length: 2754 bp
ATGACGACGTCGCCGGCGAGGTCCTCGTTTGGTTCGGCGAGATCAAACTTTAGCTTATCTGATCATGATCGACAGCACCACCGCCAAGACCTAGTTGGCGGTGCAATGCTGCCTATATTTCTCAACGACCTTAATCACAACAACCAAGACCTGGTTGAGGTCACACTAGAGCTCAACAACAACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGCAAGCGGCACGTCGGAGGAGGAGGAGACGGGGCCAGGAATGCTTGGAAGGAGCCTCTCCGCCACGTCACGGAGCCTTCGTCGTACATTCGGGTGGTTGATCAGATCGACGTCTTCGAGGACCGCAGCGTCGTCCAACTCCAGCGAGCTCCCGCTCCCGCCACGCGAGGCGAGGAGGTTGAAGGCGAAGCTTCAACGGACGAGATCGGGCGCACAAAGAGCTCTCAATGGCCTGAGGTTCATTAGTAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTCGAGGCCAGGTTCGAGTCGCTGGCCGTCGACGGATTGCTCGCCAGAGCAGACTTTGGTCGATGCATAGGGATGGCGGACTCGGAGGAGTTTGCGGTGGGGATATTTGACACATTGGCCAGGAGACGGCGGCAGAACATTACGAAGATCAGCAAGGAAGAACTTCGTGATTTTTGGTCACAAATTTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATCACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCTGCAAACAAGCTATCAAAGCTGAAAGAACAAGCAGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCGGAAAACTTTGGTTATATTGAGCTTTGGCAATTGGAAGCACTGCTTTTACAGAGGGATGTTTACATAGACTATAGCAGACCATTGAGTGCAGTAAGTGTAGCTTGGAGTCAGAACCTGAGTTCCTTCCGACCCAAGAATCTGCTTCGGAGACTCAATCGTTCACTTAACTGTCTCATACTAGACAATTGGCAGCGCGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCACTTTTTGCTTGGAAATTCTACCAGTACAGAAACAAAGCAGCATTTGAAGTCATCCGCTATTGCTTGCCAGTAGCCAAAGGTGCGGCAGAAACTTTGAAGCTTAACATGGCCCTCATTCTTTTACCTGTTTGTCGTAACACGCTAACATGGCTTCGATCAACACGAGCTAGGTCCTTCATTCCCTTTGATGACAGTACTAACTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCATGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAAGTCATCTCCGGAAGAATTTGCGCCAATATCCGCTGATTTCCACGGCAAAAAGCCAACGTATGAATTCCTATTCACTGGACCAGAGGGATTGACTGGAATTCTGATGGTGATTTTTATGGCTATCTCATTCACACTAGCAGCGAGTCACTTTCGGAAGAACATGGTGAGGCTTCCTGCCCCCTTCAACAAACTGACTGGGTTTAATGCCTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCATGGAAGCTGTTTGTACTTTGTCCACAAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATGCAGTTAAGATACTAAAGGCTTCAAACCTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGTGGGCAATACATATTTCTACAATGCCCATCAATCTCCCCATTTGAATGGCACCCATTTTCCATCACATCAGCACCTGGGGATGACCATCTCAGTGTTCATATCCGGACAGTTGGAGACTGGACGAAAGAACTGAAGCGAGCCATTTCTGAGGGAGATCATTCAATATCTATAGTTCATCAAGCTAGTGTTACTGCTATGGATCAAAGGAGACTATTCAACCAACCCAAATTGTTTCTTGATGGTCCATATGGGGCACCGGCACAGGACTACCGCAACTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACTCCTTTTGTAAGCATCCTTAAAGATCTTCTTAACAGTACAAGAACAGCAGAAGAACAAACGGATTCAAACACAGAAACTAGTACATCAGACAGCCTAAGTAGTTTTACATCATCCTGTTTGACACCAAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAAGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACGAGTGTCTATGAAGAGGGTGATGCAAGATCGACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGGACTGACATCCTATCTGGCACTAGTGTAATGACTCACTTCGCAAGACCTAACTGGAAAGAAGTGTTTACCAAGATAGCTTCCAAGCATCCATTTTCGACAGTAGGGGTATTCTACTGTGGGATGCCAATGTTAGCAAAAGAGCTGAAGATGCTATCACTTGAGCTCAGCCAGAAGACATCGACACGCTTTGAATTCCACAAGGAGTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

918

Amino Acids

103.82

Weight (kDa)

8.71

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 136 - 238 1.5e-39 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 406 - 552 5e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 594 - 706 2.3e-30 FAD-binding domain
NAD_binding_6 PF08030 712 - 872 1.7e-38 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
AasI GACNNNNNNGTC 1 cut(s) 346
AatII GACGTC 2 cut(s) 11, 332
AccB1I GGYRCC 2 cut(s) 1920, 2125
AccB7I CCANNNNNTGG 1 cut(s) 151
AccBSI CCGCTC 1 cut(s) 373
AccI GTMKAC 2 cut(s) 537, 1644
AccII CGCG 4 cut(s) 212, 384, 715, 1074
AccIII TCCGGA 2 cut(s) 1411, 1974
AclWI GGATC 2 cut(s) 2079, 2436
AcoI YGGCCR 2 cut(s) 531, 624
AcsI RAATTY 7 cut(s) 690, 723, 1127, 1418, 1466, 1500, 2732
AcuI CTGAAG 2 cut(s) 2024, 2705
AcyI GRCGYC 3 cut(s) 8, 329, 486
AfaI GTAC 9 cut(s) 304, 1139, 1309, 1679, 1718, 1865, 2227, 2272, 2747
AfiI CCNNNNNNNGG 5 cut(s) 151, 157, 288, 633, 2538
AflIII ACRYGT 1 cut(s) 1766
AhlI ACTAGT 2 cut(s) 2267, 2561
AjiI CACGTC 2 cut(s) 231, 285
AjnI CCWGG 7 cut(s) 150, 253, 515, 626, 1852, 1945, 2377
AloI GAACNNNNNNTCC 4 cut(s) 983, 1015, 1341, 1373
Alw21I GWGCWC 4 cut(s) 174, 369, 442, 2706
Alw26I GTCTC 6 cut(s) 239, 625, 1021, 1055, 1980, 2074
AlwI GGATC 2 cut(s) 2079, 2436
AlwNI CAGNNNCTG 2 cut(s) 994, 1946
Aor13HI TCCGGA 2 cut(s) 1411, 1974
AoxI GGCC 6 cut(s) 251, 448, 513, 531, 624, 1221
ApeKI GCWGC 6 cut(s) 109, 204, 344, 1069, 1151, 1541
ApoI RAATTY 7 cut(s) 690, 723, 1127, 1418, 1466, 1500, 2732
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
Asp700I GAANNNNTTC 1 cut(s) 669
AspLEI GCGC 7 cut(s) 214, 431, 715, 717, 1074, 1426, 1755
AsuC2I CCSGG 2 cut(s) 878, 1818
AsuHPI GGTGA 4 cut(s) 1522, 1579, 2495, 2497
AvaII GGWCC 8 cut(s) 21, 339, 476, 697, 1284, 1481, 2114, 2512
AxyI CCTNAGG 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 2128
BalI TGGCCA 1 cut(s) 626
BanI GGYRCC 2 cut(s) 1920, 2125
BanII GRGCYC 4 cut(s) 174, 369, 442, 2706
BauI CACGAG 1 cut(s) 1275
BbsI GAAGAC 2 cut(s) 324, 2720
Bbv12I GWGCWC 4 cut(s) 174, 369, 442, 2706
BbvI GCAGC 6 cut(s) 96, 216, 356, 1081, 1163, 1553
BccI CCATC 7 cut(s) 574, 749, 1501, 1906, 1940, 1965, 2105
BceAI ACGGC 3 cut(s) 518, 650, 1462
BciT130I CCWGG 7 cut(s) 152, 255, 517, 628, 1854, 1947, 2379
BciVI GTATCC 1 cut(s) 1769
BclI TGATCA 2 cut(s) 61, 318
BcnI CCSGG 2 cut(s) 878, 1818
BcoDI GTCTC 6 cut(s) 239, 625, 1021, 1055, 1980, 2074
BcuI ACTAGT 2 cut(s) 2267, 2561
BfmI CTRYAG 3 cut(s) 949, 1338, 2040
BfuI GTATCC 1 cut(s) 1769
BglII AGATCT 1 cut(s) 2212
BisI GCNGC 9 cut(s) 110, 205, 226, 345, 638, 1070, 1152, 1197, 1542
BlpI GCTNAGC 1 cut(s) 2705
BlsI GCNGC 9 cut(s) 111, 206, 227, 346, 639, 1071, 1153, 1198, 1543
BmcAI AGTACT 2 cut(s) 1309, 2747
Bme1390I CCNGG 9 cut(s) 152, 255, 517, 628, 878, 1818, 1854, 1947, 2379
Bme18I GGWCC 8 cut(s) 21, 339, 476, 697, 1284, 1481, 2114, 2512
BmgBI CACGTC 2 cut(s) 231, 285
BmiI GGNNCC 6 cut(s) 252, 272, 293, 1370, 1922, 2127
BmrFI CCNGG 9 cut(s) 152, 255, 517, 628, 878, 1818, 1854, 1947, 2379
BmrI ACTGGG 1 cut(s) 1608
BmsI GCATC 7 cut(s) 560, 700, 2211, 2476, 2635, 2652, 2679
BmuI ACTGGG 1 cut(s) 1608
BoxI GACNNNNGTC 1 cut(s) 564
BpiI GAAGAC 2 cut(s) 324, 2720
BpmI CTGGAG 1 cut(s) 343
Bpu1102I GCTNAGC 1 cut(s) 2705
BpuEI CTTGAG 1 cut(s) 2720
BpuMI CCSGG 2 cut(s) 878, 1818
BsaBI GATNNNNATC 3 cut(s) 66, 1718, 1956
BsaHI GRCGYC 3 cut(s) 8, 329, 486
BsaJI CCNNGG 5 cut(s) 489, 1444, 1663, 1946, 2508
BsaWI WCCGGW 3 cut(s) 473, 1411, 1974
BsaXI ACNNNNNCTCC 2 cut(s) 283, 313
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 157, 288, 633, 2538
Bse118I RCCGGY 3 cut(s) 13, 214, 2128
Bse1I ACTGG 7 cut(s) 1135, 1181, 1483, 1501, 1603, 1994, 2597
Bse21I CCTNAGG 1 cut(s) 452
Bse3DI GCAATG 3 cut(s) 111, 754, 1110
Bse8I GATNNNNATC 3 cut(s) 66, 1718, 1956
BseAI TCCGGA 2 cut(s) 1411, 1974
BseBI CCWGG 7 cut(s) 152, 255, 517, 628, 1854, 1947, 2379
BseDI CCNNGG 5 cut(s) 489, 1444, 1663, 1946, 2508
BseJI GATNNNNATC 3 cut(s) 66, 1718, 1956
BseLI CCNNNNNNNGG 5 cut(s) 151, 157, 288, 633, 2538
BseMI GCAATG 3 cut(s) 111, 754, 1110
BseMII CTCAG 6 cut(s) 443, 788, 986, 1975, 2010, 2719
BseNI ACTGG 7 cut(s) 1135, 1181, 1483, 1501, 1603, 1994, 2597
BsePI GCGCGC 1 cut(s) 713
BseRI GAGGAG 6 cut(s) 251, 254, 257, 406, 506, 608
BseSI GKGCMC 1 cut(s) 2128
BseXI GCAGC 6 cut(s) 96, 216, 356, 1081, 1163, 1553
BseYI CCCAGC 1 cut(s) 1364
BsgI GTGCAG 2 cut(s) 223, 987
Bsh1236I CGCG 4 cut(s) 212, 384, 715, 1074
BshFI GGCC 6 cut(s) 253, 450, 515, 533, 626, 1223
BshNI GGYRCC 2 cut(s) 1920, 2125
BsiHKAI GWGCWC 4 cut(s) 174, 369, 442, 2706
BsiSI CCGG 8 cut(s) 14, 215, 474, 878, 1412, 1818, 1975, 2129
BslFI GGGAC 1 cut(s) 2554
BslI CCNNNNNNNGG 5 cut(s) 151, 157, 288, 633, 2538
BsmAI GTCTC 6 cut(s) 239, 625, 1021, 1055, 1980, 2074
BsmBI CGTCTC 2 cut(s) 239, 625
BsmFI GGGAC 1 cut(s) 2554
BsmI GAATGC 1 cut(s) 264
BsnI GGCC 6 cut(s) 253, 450, 515, 533, 626, 1223
Bsp1286I GDGCHC 5 cut(s) 174, 369, 442, 2128, 2706
Bsp13I TCCGGA 2 cut(s) 1411, 1974
Bsp1407I TGTACA 1 cut(s) 1716
Bsp1720I GCTNAGC 1 cut(s) 2705
Bsp19I CCATGG 2 cut(s) 1663, 2508
BspANI GGCC 6 cut(s) 253, 450, 515, 533, 626, 1223
BspCNI CTCAG 6 cut(s) 444, 789, 987, 1974, 2011, 2718
BspEI TCCGGA 2 cut(s) 1411, 1974
BspFNI CGCG 4 cut(s) 212, 384, 715, 1074
BspHI TCATGA 1 cut(s) 64
BspLI GGNNCC 6 cut(s) 252, 272, 293, 1370, 1922, 2127
BspPI GGATC 2 cut(s) 2079, 2436
BspT107I GGYRCC 2 cut(s) 1920, 2125
BsrBI CCGCTC 1 cut(s) 373
BsrDI GCAATG 3 cut(s) 111, 754, 1110
BsrFI RCCGGY 3 cut(s) 13, 214, 2128
BsrGI TGTACA 1 cut(s) 1716
BsrI ACTGG 7 cut(s) 1135, 1181, 1483, 1501, 1603, 1994, 2597
BssAI RCCGGY 3 cut(s) 13, 214, 2128
BssECI CCNNGG 5 cut(s) 489, 1444, 1663, 1946, 2508
BssHII GCGCGC 1 cut(s) 713
BssNI GRCGYC 3 cut(s) 8, 329, 486
BssSI CACGAG 1 cut(s) 1275
BssT1I CCWWGG 2 cut(s) 1663, 2508
Bst2BI CACGAG 1 cut(s) 1275
Bst2UI CCWGG 7 cut(s) 152, 255, 517, 628, 1854, 1947, 2379
Bst4CI ACNGT 7 cut(s) 1049, 1092, 1307, 1981, 2225, 2641, 2657
Bst6I CTCTTC 1 cut(s) 2472
BstACI GRCGYC 3 cut(s) 8, 329, 486
BstAUI TGTACA 1 cut(s) 1716
BstC8I GCNNGC 8 cut(s) 15, 223, 365, 531, 549, 715, 1178, 2010
BstDEI CTNAG 7 cut(s) 452, 797, 995, 1961, 2019, 2285, 2705
BstDSI CCRYGG 3 cut(s) 1444, 1663, 2508
BstEII GGTNACC 1 cut(s) 2365
BstENI CCTNNNNNAGG 1 cut(s) 155
BstFNI CGCG 4 cut(s) 212, 384, 715, 1074
BstHHI GCGC 7 cut(s) 214, 431, 715, 717, 1074, 1426, 1755
BstMAI GTCTC 6 cut(s) 239, 625, 1021, 1055, 1980, 2074
BstMWI GCNNNNNNNGC 9 cut(s) 218, 259, 437, 502, 793, 823, 1193, 1261, 2689
BstNI CCWGG 7 cut(s) 152, 255, 517, 628, 1854, 1947, 2379
BstNSI RCATGY 2 cut(s) 1383, 1770
BstPAI GACNNNNGTC 1 cut(s) 564
BstPI GGTNACC 1 cut(s) 2365
BstSCI CCNGG 9 cut(s) 150, 253, 515, 626, 876, 1816, 1852, 1945, 2377
BstSFI CTRYAG 3 cut(s) 949, 1338, 2040
BstSLI GKGCMC 1 cut(s) 2128
BstUI CGCG 4 cut(s) 212, 384, 715, 1074
BstV1I GCAGC 6 cut(s) 96, 216, 356, 1081, 1163, 1553
BstV2I GAAGAC 2 cut(s) 324, 2720
BstX2I RGATCY 1 cut(s) 2212
BstXI CCANNNNNNTGG 1 cut(s) 1917
BstYI RGATCY 1 cut(s) 2212
Bsu36I CCTNAGG 1 cut(s) 452
BsuI GTATCC 1 cut(s) 1769
BsuRI GGCC 6 cut(s) 253, 450, 515, 533, 626, 1223
BtgI CCRYGG 3 cut(s) 1444, 1663, 2508
BtrI CACGTC 2 cut(s) 231, 285
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 3 cut(s) 917, 1476, 1969
Cac8I GCNNGC 8 cut(s) 15, 223, 365, 531, 549, 715, 1178, 2010
CaiI CAGNNNCTG 2 cut(s) 994, 1946
CciI TCATGA 1 cut(s) 64
CfoI GCGC 7 cut(s) 214, 431, 715, 717, 1074, 1426, 1755
Cfr10I RCCGGY 3 cut(s) 13, 214, 2128
CseI GACGC 3 cut(s) 196, 336, 494
CsiI ACCWGGT 1 cut(s) 150
Csp6I GTAC 9 cut(s) 303, 1138, 1308, 1678, 1717, 1864, 2226, 2271, 2746
CviQI GTAC 9 cut(s) 303, 1138, 1308, 1678, 1717, 1864, 2226, 2271, 2746
DdeI CTNAG 7 cut(s) 452, 797, 995, 1961, 2019, 2285, 2705
DraI TTTAAA 1 cut(s) 2398
DrdI GACNNNNNNGTC 1 cut(s) 346
DseDI GACNNNNNNGTC 1 cut(s) 346
EaeI YGGCCR 2 cut(s) 531, 624
Eam1104I CTCTTC 1 cut(s) 2472
EarI CTCTTC 1 cut(s) 2472
EciI GGCGGA 2 cut(s) 268, 599
Ecl136II GAGCTC 4 cut(s) 172, 367, 440, 2704
Eco130I CCWWGG 2 cut(s) 1663, 2508
Eco24I GRGCYC 4 cut(s) 174, 369, 442, 2706
Eco47I GGWCC 8 cut(s) 21, 339, 476, 697, 1284, 1481, 2114, 2512
Eco53kI GAGCTC 4 cut(s) 172, 367, 440, 2704
Eco57I CTGAAG 2 cut(s) 2024, 2705
Eco81I CCTNAGG 1 cut(s) 452
Eco91I GGTNACC 1 cut(s) 2365
EcoICRI GAGCTC 4 cut(s) 172, 367, 440, 2704
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO109I RGGNCCY 2 cut(s) 21, 1284
EcoO65I GGTNACC 1 cut(s) 2365
EcoRI GAATTC 3 cut(s) 1466, 1500, 2732
EcoRII CCWGG 7 cut(s) 150, 253, 515, 626, 1852, 1945, 2377
EcoT14I CCWWGG 2 cut(s) 1663, 2508
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 4 cut(s) 174, 369, 442, 2706
ErhI CCWWGG 2 cut(s) 1663, 2508
Esp3I CGTCTC 2 cut(s) 239, 625
FalI AAGNNNNNCTT 7 cut(s) 906, 938, 964, 996, 2202, 2234, 2732
FaqI GGGAC 1 cut(s) 2554
FauI CCCGC 2 cut(s) 378, 384
FauNDI CATATG 1 cut(s) 2119
FbaI TGATCA 2 cut(s) 61, 318
FblI GTMKAC 2 cut(s) 537, 1644
Fnu4HI GCNGC 9 cut(s) 110, 205, 226, 345, 638, 1070, 1152, 1197, 1542
FriOI GRGCYC 4 cut(s) 174, 369, 442, 2706
Fsp4HI GCNGC 9 cut(s) 110, 205, 226, 345, 638, 1070, 1152, 1197, 1542
GlaI GCGC 7 cut(s) 213, 430, 714, 716, 1073, 1425, 1754
GluI GCNGC 9 cut(s) 110, 205, 226, 345, 638, 1070, 1152, 1197, 1542
GsaI CCCAGC 1 cut(s) 1368
GsuI CTGGAG 1 cut(s) 343
HaeIII GGCC 6 cut(s) 253, 450, 515, 533, 626, 1223
HapII CCGG 8 cut(s) 14, 215, 474, 878, 1412, 1818, 1975, 2129
HgaI GACGC 3 cut(s) 196, 336, 494
HhaI GCGC 7 cut(s) 214, 431, 715, 717, 1074, 1426, 1755
Hin1I GRCGYC 3 cut(s) 8, 329, 486
Hin6I GCGC 7 cut(s) 212, 429, 713, 715, 1072, 1424, 1753
HinP1I GCGC 7 cut(s) 212, 429, 713, 715, 1072, 1424, 1753
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HindIII AAGCTT 2 cut(s) 407, 1211
HpaII CCGG 8 cut(s) 14, 215, 474, 878, 1412, 1818, 1975, 2129
HphI GGTGA 4 cut(s) 1522, 1579, 2495, 2497
Hpy166II GTNNAC 6 cut(s) 538, 940, 1040, 1645, 1687, 2607
Hpy188III TCNNGA 5 cut(s) 65, 674, 1412, 1975, 2108
Hpy8I GTNNAC 6 cut(s) 538, 940, 1040, 1645, 1687, 2607
HpyAV CCTTC 8 cut(s) 261, 305, 394, 728, 1012, 1297, 1594, 1621
HpyCH4III ACNGT 7 cut(s) 1049, 1092, 1307, 1981, 2225, 2641, 2657
HpyCH4IV ACGT 6 cut(s) 8, 230, 284, 329, 1460, 1647
HpyF10VI GCNNNNNNNGC 9 cut(s) 218, 259, 437, 502, 793, 823, 1193, 1261, 2689
HpyF3I CTNAG 7 cut(s) 452, 797, 995, 1961, 2019, 2285, 2705
HpySE526I ACGT 6 cut(s) 8, 230, 284, 329, 1460, 1647
Hsp92I GRCGYC 3 cut(s) 8, 329, 486
HspAI GCGC 7 cut(s) 212, 429, 713, 715, 1072, 1424, 1753
Kpn2I TCCGGA 2 cut(s) 1411, 1974
KroI GCCGGC 1 cut(s) 13
KroNI GCCGGC 1 cut(s) 15
Ksp22I TGATCA 2 cut(s) 61, 318
LmnI GCTCC 6 cut(s) 270, 291, 372, 378, 493, 2183
Lsp1109I GCAGC 6 cut(s) 96, 216, 356, 1081, 1163, 1553
LweI GCATC 7 cut(s) 560, 700, 2211, 2476, 2635, 2652, 2679
MabI ACCWGGT 1 cut(s) 150
MaeII ACGT 6 cut(s) 8, 230, 284, 329, 1460, 1647
MaeIII GTNAC 8 cut(s) 160, 285, 684, 1247, 1382, 1547, 2059, 2365
MbiI CCGCTC 1 cut(s) 373
MfeI CAATTG 3 cut(s) 908, 1063, 1344
MflI RGATCY 1 cut(s) 2212
MhlI GDGCHC 5 cut(s) 174, 369, 442, 2128, 2706
MlsI TGGCCA 1 cut(s) 626
MluNI TGGCCA 1 cut(s) 626
MlyI GAGTC 8 cut(s) 533, 581, 994, 1023, 1555, 2412, 2491, 2566
MmeI TCCRAC 5 cut(s) 213, 378, 1030, 1058, 1963
Mox20I TGGCCA 1 cut(s) 626
Mph1103I ATGCAT 1 cut(s) 575
MreI CGCCGGCG 1 cut(s) 13
MroI TCCGGA 2 cut(s) 1411, 1974
MroNI GCCGGC 1 cut(s) 13
MroXI GAANNNNTTC 1 cut(s) 669
MscI TGGCCA 1 cut(s) 626
MslI CAYNNNNRTG 5 cut(s) 197, 310, 578, 1915, 1962
Msp20I TGGCCA 1 cut(s) 626
MspA1I CMGCKG 1 cut(s) 1436
MspI CCGG 8 cut(s) 14, 215, 474, 878, 1412, 1818, 1975, 2129
MspR9I CCNGG 9 cut(s) 152, 255, 517, 628, 878, 1818, 1854, 1947, 2379
MunI CAATTG 3 cut(s) 908, 1063, 1344
Mva1269I GAATGC 1 cut(s) 264
MvaI CCWGG 7 cut(s) 152, 255, 517, 628, 1854, 1947, 2379
MvnI CGCG 4 cut(s) 212, 384, 715, 1074
MwoI GCNNNNNNNGC 9 cut(s) 218, 259, 437, 502, 793, 823, 1193, 1261, 2689
NaeI GCCGGC 1 cut(s) 15
NciI CCSGG 2 cut(s) 878, 1818
NcoI CCATGG 2 cut(s) 1663, 2508
NdeI CATATG 1 cut(s) 2119
NgoMIV GCCGGC 1 cut(s) 13
NlaIV GGNNCC 6 cut(s) 252, 272, 293, 1370, 1922, 2127
NmeAIII GCCGAG 1 cut(s) 514
NmuCI GTSAC 5 cut(s) 160, 285, 684, 1382, 1547
NsiI ATGCAT 1 cut(s) 575
NspI RCATGY 2 cut(s) 1383, 1770
PagI TCATGA 1 cut(s) 64
PauI GCGCGC 1 cut(s) 713
PciI ACATGT 1 cut(s) 1766
PcsI WCGNNNNNNNCGW 5 cut(s) 14, 204, 295, 332, 1273
PctI GAATGC 1 cut(s) 264
PdiI GCCGGC 1 cut(s) 15
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 3 cut(s) 762, 1015, 2252
PflFI GACNNNGTC 2 cut(s) 7, 194
PflMI CCANNNNNTGG 1 cut(s) 151
PkrI GCNGC 9 cut(s) 111, 206, 227, 346, 639, 1071, 1153, 1198, 1543
PleI GAGTC 8 cut(s) 532, 581, 993, 1023, 1554, 2411, 2491, 2566
PpsI GAGTC 8 cut(s) 532, 581, 993, 1023, 1554, 2411, 2491, 2566
PpuMI RGGWCCY 2 cut(s) 21, 1284
PscI ACATGT 1 cut(s) 1766
PshAI GACNNNNGTC 1 cut(s) 564
PsiI TTATAA 1 cut(s) 791
Psp124BI GAGCTC 4 cut(s) 174, 369, 442, 2706
Psp5II RGGWCCY 2 cut(s) 21, 1284
Psp6I CCWGG 7 cut(s) 150, 253, 515, 626, 1852, 1945, 2377
PspEI GGTNACC 1 cut(s) 2365
PspFI CCCAGC 1 cut(s) 1364
PspGI CCWGG 7 cut(s) 150, 253, 515, 626, 1852, 1945, 2377
PspN4I GGNNCC 6 cut(s) 252, 272, 293, 1370, 1922, 2127
PspPPI RGGWCCY 2 cut(s) 21, 1284
PstNI CAGNNNCTG 2 cut(s) 994, 1946
PsuI RGATCY 1 cut(s) 2212
PsyI GACNNNGTC 2 cut(s) 7, 194
PteI GCGCGC 1 cut(s) 713
RsaI GTAC 9 cut(s) 304, 1139, 1309, 1679, 1718, 1865, 2227, 2272, 2747
RsaNI GTAC 9 cut(s) 303, 1138, 1308, 1678, 1717, 1864, 2226, 2271, 2746
RseI CAYNNNNRTG 5 cut(s) 197, 310, 578, 1915, 1962
SacI GAGCTC 4 cut(s) 174, 369, 442, 2706
SalI GTCGAC 1 cut(s) 536
SatI GCNGC 9 cut(s) 110, 205, 226, 345, 638, 1070, 1152, 1197, 1542
ScaI AGTACT 2 cut(s) 1309, 2747
SchI GAGTC 8 cut(s) 533, 581, 994, 1023, 1555, 2412, 2491, 2566
ScrFI CCNGG 9 cut(s) 152, 255, 517, 628, 878, 1818, 1854, 1947, 2379
SduI GDGCHC 5 cut(s) 174, 369, 442, 2128, 2706
SexAI ACCWGGT 1 cut(s) 150
SfaNI GCATC 7 cut(s) 560, 700, 2211, 2476, 2635, 2652, 2679
SfcI CTRYAG 3 cut(s) 949, 1338, 2040
SgrAI CRCCGGYG 2 cut(s) 13, 214
SgrDI CGTCGACG 1 cut(s) 536
SinI GGWCC 8 cut(s) 21, 339, 476, 697, 1284, 1481, 2114, 2512
SmiMI CAYNNNNRTG 5 cut(s) 197, 310, 578, 1915, 1962
SmlI CTYRAG 1 cut(s) 2699
SmoI CTYRAG 1 cut(s) 2699
SpeI ACTAGT 2 cut(s) 2267, 2561
SstI GAGCTC 4 cut(s) 174, 369, 442, 2706
StyD4I CCNGG 9 cut(s) 150, 253, 515, 626, 876, 1816, 1852, 1945, 2377
StyI CCWWGG 2 cut(s) 1663, 2508
TaaI ACNGT 7 cut(s) 1049, 1092, 1307, 1981, 2225, 2641, 2657
TaiI ACGT 6 cut(s) 11, 233, 287, 332, 1463, 1650
TatI WGTACW 8 cut(s) 1137, 1307, 1677, 1716, 1863, 2225, 2270, 2745
TauI GCSGC 3 cut(s) 228, 640, 1199
TfiI GAWTC 3 cut(s) 762, 1015, 2252
TscAI CASTG 3 cut(s) 924, 1483, 1969
TseFI GTSAC 5 cut(s) 160, 285, 684, 1382, 1547
TseI GCWGC 6 cut(s) 109, 204, 344, 1069, 1151, 1541
Tsp45I GTSAC 5 cut(s) 160, 285, 684, 1382, 1547
TspDTI ATGAA 9 cut(s) 448, 843, 1279, 1349, 1479, 1958, 2036, 2427, 2490
TspGWI ACGGA 4 cut(s) 304, 430, 555, 2264
TspRI CASTG 3 cut(s) 924, 1483, 1969
Tth111I GACNNNGTC 2 cut(s) 7, 194
Van91I CCANNNNNTGG 1 cut(s) 151
VpaK11BI GGWCC 8 cut(s) 21, 339, 476, 697, 1284, 1481, 2114, 2512
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 7 cut(s) 690, 723, 1127, 1418, 1466, 1500, 2732
XceI RCATGY 2 cut(s) 1383, 1770
XcmI CCANNNNNNNNNTGG 2 cut(s) 92, 2534
XmiI GTMKAC 2 cut(s) 537, 1644
XmnI GAANNNNTTC 1 cut(s) 669
ZraI GACGTC 2 cut(s) 9, 330
ZrmI AGTACT 2 cut(s) 1309, 2747
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.