Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000496.1

Orthogroup ID

OG0003315

Physical Location & Seq

Genomic Coordinates Forward (+)

37859 .. 42621

Gene Structure 4763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000496.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

atgacgtcgccggcgaccccgtcgtttggttccaagcgatcaaactacagcttacctgatcatgatcgtcagcaccaccgcctttgcggcgcaatgctgcctatatttctcaacgacctcactaatcacaacaaccaagacctggttgaggtcacactagagctcaacaacgacgacgatgacattgtcgtgtgcagcgtcgcgccggtggggaacgacacgccggaggaggaggaggaggtggaggaggaggaggaagaggagacggggacaggaatgctaggaaggagcttctccgctacgtcacggagcattcgccgcacattcgggtggctgatcagatcgtcgtcgtcgaggaccgccgcgtcttccaactccggtgaactcgctcttccgccacgagaggcgaggaggctgaaggcgaagcttcaacggacaagatcgagcgcgcaaagagctctcaacggcctgaggttcatcagcaagaccaccggacctagcgacgccgaggagctgtggaagcaagtggaggccaggttcgagtcgctggccgtccacggattgctcgccagaggagactttggtcgatgcatagggatggcggattcggaggagtttgcggtggggatatttgacacattggcgaggaggcggcggcagaaaattacgaagatcacgaaggaagaacttcatgatttttggatacaaatctcggaccagagctttgatgcgcgccttcaaattttcttcgacatggcagatagcaatgaggatggaagaatcacaagggagggagtgcaagagcttataatgctgagtgcttcagcaaacaagctatcaaagctgaaagaacaagctgaagaatatgcttcattgataatggaagaactagaccccgaaaattttggttatattgagttatggcaattggaagcactgcttttacaaagagacgtatacataaactacagcagacaattgagcgcagtaagtgtaggttggagtcagaacctgaattccttcaggcccaagaatctgcttcggagactaaatcgttcacttcagtgtctcatactagacaatttgcaacgcggttggattttattactgtggattgttgcaatggcttcactttttgcctggaaattctaccaatacagaaacaaagcagcatttgaagtcatcggctattgcttgccagcagccaaaggagctgcagaaactttgaagcttaacatggccctcatccttttacctgtttgtcgtaacacattgacatggcttcgatcaacacgagctaggttcttcattccctttgatgacaacattaatttccacaagatgattgcatttgctatagcaattggaataattgttcatgctgggaaccatgtggcatgtgactttcctcgtctagtaaactcatctgcggaagaatttgagccaatatcctctgatttccatggcaaaaacccgacgtacaaattcttattcactggaccagaaggcttgactggaattctgatggtgatttttatggccatctcattcacgctagcagcaagtcactttcgaaggaacatggtgaggcttcctgcccccttgaacaaactgactgggtttaacgcgttctggtattctcatcatctgctaggtctggtctacgttttgctactcatccatggaagctgtttgtactttgtccacgagtggtatcagaaaacgacatggatgtacatctctgttccatttctgctgtatgtagtagagcgcggtatccgaacatgtagatcaaaacactattcagttaagataataaaggctacaatcttacccggaaatgttatcagcttaatcatgtccaagccacctggatttaagtacagaagtggacaatacatatttctacaatgcccaacaatctccccatttgaatggcacccattttccatcacctcagcacctggggatgagcatctcagtgttcatatccgaacagttggagactggacgcaagaattgaagcgagccatttctgagggagatcattcattatctttagttcatcggactagtgttgctctgccacaagatacggatcaaataagactatgcagccaacccaaattgttttttgatggtccatatggggcaccggcacaggactaccgcaactatgatgtcctactccttgtgggtcttggcattggagctaccccttttgtaagcgtccttaaagatcttcttaacagcacaagaacagcagaagaacaactggattcaaatacagaaactagtacaccatcaggcagcctaaatagttttacatcatcatgtttgacaccaaatgacaagaagaaatcacagaggactacaaatgctcatttctattgggttaccagagaacctggctctttcgagtggtttaagggagtcatggatgaagtggcagaaatggatcacaaaggtcagattgaacttcacaactaccttacgagtgtctacgaagagggtgatgcaaggtcaactctaatcaccatggtccaagctctcaaccatgccaaacatggagttgacatcctatctggcaccagagtaatgactcattttgcaagacctaattggaaagaagtgtttaccaagatagcttccaagcatccattttcgacagtaggggtattctactgtgggatgcccatgttggcaaaggagctgaagatgctatcacttgagctcagtcacaagacatcgacacgctttgaattccacaaggagtacttttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

927

Amino Acids

105.26

Weight (kDa)

6.89

Isoelectric Point (pI)

48.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19230 AT1G19230
fragaria_vesca	FvH4_1g09270 FvH4_1g09270 FvH4_1g09270 FvH4_1g09270
malus_domestica	MD02G1099900.v1.1 MD12G1213800.v1.1 MD15G1222800.v1.1
prunus_persica	Prupe.7G193000_v2.0.a1 Prupe.7G193000_v2.0.a1 Prupe.7G193000_v2.0.a1 Prupe.7G193000_v2.0.a1
pyrus_communis	pycom02g07780 pycom03g08560 pycom06g11890
rosa_chinensis	RchiOBHm_Chr2g0095831 RchiOBHm_Chr2g0103601
rosa_laevigata	RLG00000016598 RLG00000017348
rosa_multiflora	Rmu_co8313273.1_g000001 Rmu_sc0000496.1_g000009 Rmu_sc0008750.1_g000011
rosa_roxburghii	Rroxscaffold_2G00146050
rosa_rugosa	Rorug02G0053200 Rorug02G0053200 Rorug02G0116200 Rorug02G0116300.1
rosa_samantha	Rh2AG102100 Rh2BG103600 Rh2CG106000 Rh2CG171000 Rh2DG103700 Rh4BG287500
rosa_wichuraiana	Rw2G007750 Rw2G012920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	809
AasI	GACNNNNNNGTC	1 cut(s)	364
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	3 cut(s)	1938, 2152, 2588
AccB7I	CCANNNNNTGG	1 cut(s)	142
AccI	GTMKAC	3 cut(s)	957, 1662, 2502
AccII	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
AclWI	GGATC	2 cut(s)	2106, 2466
AcoI	YGGCCR	2 cut(s)	549, 1539
AcsI	RAATTY	8 cut(s)	741, 901, 1015, 1145, 1436, 1484, 1518, 2762
AcuI	CTGAAG	6 cut(s)	437, 807, 879, 1006, 1046, 2735
AcyI	GRCGYC	2 cut(s)	5, 504
AfaI	GTAC	6 cut(s)	1481, 1697, 1736, 1883, 2299, 2777
AfiI	CCNNNNNNNGG	3 cut(s)	26, 142, 148
AflIII	ACRYGT	2 cut(s)	1626, 1784
AhlI	ACTAGT	2 cut(s)	2072, 2294
AjnI	CCWGG	6 cut(s)	141, 533, 1139, 1870, 1963, 2407
AleI	CACNNNNGTG	1 cut(s)	1063
AloI	GAACNNNNNNTCC	6 cut(s)	521, 553, 1001, 1033, 1359, 1391
Alw21I	GWGCWC	3 cut(s)	165, 460, 2736
Alw26I	GTCTC	6 cut(s)	257, 570, 945, 1039, 1073, 1998
AlwI	GGATC	2 cut(s)	2106, 2466
AlwNI	CAGNNNCTG	2 cut(s)	1012, 1964
AoxI	GGCC	6 cut(s)	466, 531, 549, 1025, 1239, 1539
ApeKI	GCWGC	8 cut(s)	97, 195, 1169, 1202, 1214, 1559, 2115, 2310
ApoI	RAATTY	8 cut(s)	741, 901, 1015, 1145, 1436, 1484, 1518, 2762
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
AseI	ATTAAT	1 cut(s)	1329
Asp700I	GAANNNNTTC	2 cut(s)	687, 1019
AspLEI	GCGC	8 cut(s)	92, 205, 449, 451, 733, 735, 986, 1773
AspS9I	GGNCC	8 cut(s)	357, 494, 715, 1026, 1240, 1499, 2141, 2542
AsuC2I	CCSGG	1 cut(s)	1836
AsuHPI	GGTGA	6 cut(s)	392, 1540, 1597, 1945, 2525, 2527
AsuII	TTCGAA	1 cut(s)	1573
AsuNHI	GCTAGC	1 cut(s)	1555
AvaII	GGWCC	6 cut(s)	357, 494, 715, 1499, 2141, 2542
AxyI	CCTNAGG	1 cut(s)	470
BaeGI	GKGCMC	1 cut(s)	2155
BalI	TGGCCA	1 cut(s)	1541
BanI	GGYRCC	3 cut(s)	1938, 2152, 2588
BanII	GRGCYC	3 cut(s)	165, 460, 2736
BauI	CACGAG	3 cut(s)	399, 1293, 1706
BbsI	GAAGAC	1 cut(s)	360
Bbv12I	GWGCWC	3 cut(s)	165, 460, 2736
BbvCI	CCTCAGC	1 cut(s)	1957
BbvI	GCAGC	8 cut(s)	84, 207, 1181, 1201, 1214, 1571, 2127, 2322
BccI	CCATC	7 cut(s)	592, 767, 1519, 1550, 1958, 2132, 2311
BceAI	ACGGC	2 cut(s)	481, 536
BciT130I	CCWGG	6 cut(s)	143, 535, 1141, 1872, 1965, 2409
BciVI	GTATCC	2 cut(s)	696, 1787
BclI	TGATCA	2 cut(s)	58, 336
BcnI	CCSGG	1 cut(s)	1836
BcoDI	GTCTC	6 cut(s)	257, 570, 945, 1039, 1073, 1998
BcuI	ACTAGT	2 cut(s)	2072, 2294
BfmI	CTRYAG	4 cut(s)	46, 967, 1215, 1356
BfuI	GTATCC	2 cut(s)	696, 1787
BglI	GCCNNNNNGGC	1 cut(s)	87
BglII	AGATCT	1 cut(s)	2239
BmcAI	AGTACT	1 cut(s)	2777
Bme1390I	CCNGG	7 cut(s)	143, 535, 1141, 1836, 1872, 1965, 2409
Bme18I	GGWCC	6 cut(s)	357, 494, 715, 1499, 2141, 2542
BmgT120I	GGNCC	8 cut(s)	357, 494, 715, 1026, 1240, 1499, 2141, 2542
BmiI	GGNNCC	5 cut(s)	31, 1388, 1940, 2154, 2590
BmrFI	CCNGG	7 cut(s)	143, 535, 1141, 1836, 1872, 1965, 2409
BmrI	ACTGGG	1 cut(s)	1626
BmsI	GCATC	7 cut(s)	578, 718, 1984, 2506, 2665, 2682, 2709
BmtI	GCTAGC	1 cut(s)	1559
BmuI	ACTGGG	1 cut(s)	1626
BoxI	GACNNNNGTC	1 cut(s)	582
BpiI	GAAGAC	1 cut(s)	360
Bpu10I	CCTNAGC	1 cut(s)	1957
Bpu14I	TTCGAA	1 cut(s)	1573
BpuEI	CTTGAG	1 cut(s)	2750
BpuMI	CCSGG	1 cut(s)	1836
BsaBI	GATNNNNATC	5 cut(s)	63, 707, 1736, 1974, 2097
BsaHI	GRCGYC	2 cut(s)	5, 504
BsaJI	CCNNGG	6 cut(s)	507, 556, 1462, 1681, 1964, 2538
BsaWI	WCCGGW	2 cut(s)	377, 491
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	3 cut(s)	26, 142, 148
Bse118I	RCCGGY	3 cut(s)	10, 205, 2155
Bse1I	ACTGG	5 cut(s)	1501, 1519, 1621, 2012, 2280
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	3 cut(s)	99, 772, 1128
Bse8I	GATNNNNATC	5 cut(s)	63, 707, 1736, 1974, 2097
BseBI	CCWGG	6 cut(s)	143, 535, 1141, 1872, 1965, 2409
BseDI	CCNNGG	6 cut(s)	507, 556, 1462, 1681, 1964, 2538
BseJI	GATNNNNATC	5 cut(s)	63, 707, 1736, 1974, 2097
BseLI	CCNNNNNNNGG	3 cut(s)	26, 142, 148
BseMI	GCAATG	3 cut(s)	99, 772, 1128
BseMII	CTCAG	6 cut(s)	461, 806, 1971, 1993, 2028, 2749
BseNI	ACTGG	5 cut(s)	1501, 1519, 1621, 2012, 2280
BsePI	GCGCGC	2 cut(s)	447, 731
BseSI	GKGCMC	1 cut(s)	2155
BseXI	GCAGC	8 cut(s)	84, 207, 1181, 1201, 1214, 1571, 2127, 2322
BseYI	CCCAGC	1 cut(s)	1382
BsgI	GTGCAG	1 cut(s)	214
Bsh1236I	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
BshFI	GGCC	6 cut(s)	468, 533, 551, 1027, 1241, 1541
BshNI	GGYRCC	3 cut(s)	1938, 2152, 2588
BsiHKAI	GWGCWC	3 cut(s)	165, 460, 2736
BsiSI	CCGG	7 cut(s)	11, 206, 224, 378, 492, 1836, 2156
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	3 cut(s)	26, 142, 148
BsmAI	GTCTC	6 cut(s)	257, 570, 945, 1039, 1073, 1998
BsmBI	CGTCTC	2 cut(s)	257, 945
BsmFI	GGGAC	1 cut(s)	283
BsmI	GAATGC	2 cut(s)	282, 312
BsnI	GGCC	6 cut(s)	468, 533, 551, 1027, 1241, 1541
Bsp119I	TTCGAA	1 cut(s)	1573
Bsp1286I	GDGCHC	4 cut(s)	165, 460, 2155, 2736
Bsp1407I	TGTACA	1 cut(s)	1734
Bsp19I	CCATGG	3 cut(s)	1462, 1681, 2538
BspANI	GGCC	6 cut(s)	468, 533, 551, 1027, 1241, 1541
BspCNI	CTCAG	6 cut(s)	462, 807, 1970, 1992, 2029, 2748
BspFNI	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
BspHI	TCATGA	2 cut(s)	61, 691
BspLI	GGNNCC	5 cut(s)	31, 1388, 1940, 2154, 2590
BspMAI	CTGCAG	1 cut(s)	1219
BspOI	GCTAGC	1 cut(s)	1559
BspPI	GGATC	2 cut(s)	2106, 2466
BspQI	GCTCTTC	1 cut(s)	396
BspT104I	TTCGAA	1 cut(s)	1573
BspT107I	GGYRCC	3 cut(s)	1938, 2152, 2588
BsrDI	GCAATG	3 cut(s)	99, 772, 1128
BsrFI	RCCGGY	3 cut(s)	10, 205, 2155
BsrGI	TGTACA	1 cut(s)	1734
BsrI	ACTGG	5 cut(s)	1501, 1519, 1621, 2012, 2280
BssAI	RCCGGY	3 cut(s)	10, 205, 2155
BssECI	CCNNGG	6 cut(s)	507, 556, 1462, 1681, 1964, 2538
BssHII	GCGCGC	2 cut(s)	447, 731
BssNAI	GTATAC	1 cut(s)	958
BssNI	GRCGYC	2 cut(s)	5, 504
BssSI	CACGAG	3 cut(s)	399, 1293, 1706
BssT1I	CCWWGG	3 cut(s)	1462, 1681, 2538
Bst1107I	GTATAC	1 cut(s)	958
Bst2BI	CACGAG	3 cut(s)	399, 1293, 1706
Bst2UI	CCWGG	6 cut(s)	143, 535, 1141, 1872, 1965, 2409
Bst4CI	ACNGT	4 cut(s)	1110, 1999, 2671, 2687
Bst6I	CTCTTC	3 cut(s)	252, 396, 2502
BstACI	GRCGYC	2 cut(s)	5, 504
BstAUI	TGTACA	1 cut(s)	1734
BstBI	TTCGAA	1 cut(s)	1573
BstC8I	GCNNGC	9 cut(s)	12, 449, 549, 567, 733, 1196, 1200, 1557, 2028
BstDEI	CTNAG	6 cut(s)	470, 815, 1957, 1979, 2037, 2735
BstDSI	CCRYGG	4 cut(s)	556, 1462, 1681, 2538
BstEII	GGTNACC	1 cut(s)	2395
BstENI	CCTNNNNNAGG	1 cut(s)	146
BstFNI	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
BstHHI	GCGC	8 cut(s)	92, 205, 449, 451, 733, 735, 986, 1773
BstMAI	GTCTC	6 cut(s)	257, 570, 945, 1039, 1073, 1998
BstMWI	GCNNNNNNNGC	8 cut(s)	87, 318, 455, 520, 811, 841, 1211, 2719
BstNI	CCWGG	6 cut(s)	143, 535, 1141, 1872, 1965, 2409
BstNSI	RCATGY	2 cut(s)	1401, 1788
BstPAI	GACNNNNGTC	1 cut(s)	582
BstPI	GGTNACC	1 cut(s)	2395
BstSCI	CCNGG	7 cut(s)	141, 533, 1139, 1834, 1870, 1963, 2407
BstSFI	CTRYAG	4 cut(s)	46, 967, 1215, 1356
BstSLI	GKGCMC	1 cut(s)	2155
BstUI	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
BstV1I	GCAGC	8 cut(s)	84, 207, 1181, 1201, 1214, 1571, 2127, 2322
BstV2I	GAAGAC	1 cut(s)	360
BstX2I	RGATCY	1 cut(s)	2239
BstXI	CCANNNNNNTGG	1 cut(s)	1935
BstYI	RGATCY	1 cut(s)	2239
BstZ17I	GTATAC	1 cut(s)	958
Bsu36I	CCTNAGG	1 cut(s)	470
BsuI	GTATCC	2 cut(s)	696, 1787
BsuRI	GGCC	6 cut(s)	468, 533, 551, 1027, 1241, 1541
BtgI	CCRYGG	4 cut(s)	556, 1462, 1681, 2538
BtsI	GCAGTG	1 cut(s)	935
BtsIMutI	CAGTG	4 cut(s)	935, 1070, 1494, 1987
Cac8I	GCNNGC	9 cut(s)	12, 449, 549, 567, 733, 1196, 1200, 1557, 2028
CaiI	CAGNNNCTG	2 cut(s)	1012, 1964
CciI	TCATGA	2 cut(s)	61, 691
CfoI	GCGC	8 cut(s)	92, 205, 449, 451, 733, 735, 986, 1773
Cfr10I	RCCGGY	3 cut(s)	10, 205, 2155
Cfr13I	GGNCC	8 cut(s)	357, 494, 715, 1026, 1240, 1499, 2141, 2542
CseI	GACGC	5 cut(s)	187, 354, 512, 2020, 2218
CsiI	ACCWGGT	1 cut(s)	141
Csp6I	GTAC	6 cut(s)	1480, 1696, 1735, 1882, 2298, 2776
CspCI	CAANNNNNGTGG	2 cut(s)	65, 100
CviQI	GTAC	6 cut(s)	1480, 1696, 1735, 1882, 2298, 2776
DdeI	CTNAG	6 cut(s)	470, 815, 1957, 1979, 2037, 2735
DrdI	GACNNNNNNGTC	1 cut(s)	364
DseDI	GACNNNNNNGTC	1 cut(s)	364
EaeI	YGGCCR	2 cut(s)	549, 1539
Eam1104I	CTCTTC	3 cut(s)	252, 396, 2502
EarI	CTCTTC	3 cut(s)	252, 396, 2502
EciI	GGCGGA	2 cut(s)	384, 617
Ecl136II	GAGCTC	3 cut(s)	163, 458, 2734
Eco130I	CCWWGG	3 cut(s)	1462, 1681, 2538
Eco24I	GRGCYC	3 cut(s)	165, 460, 2736
Eco47I	GGWCC	6 cut(s)	357, 494, 715, 1499, 2141, 2542
Eco53kI	GAGCTC	3 cut(s)	163, 458, 2734
Eco57I	CTGAAG	6 cut(s)	437, 807, 879, 1006, 1046, 2735
Eco81I	CCTNAGG	1 cut(s)	470
Eco91I	GGTNACC	1 cut(s)	2395
EcoICRI	GAGCTC	3 cut(s)	163, 458, 2734
EcoNI	CCTNNNNNAGG	1 cut(s)	146
EcoO65I	GGTNACC	1 cut(s)	2395
EcoRI	GAATTC	3 cut(s)	1015, 1518, 2762
EcoRII	CCWGG	6 cut(s)	141, 533, 1139, 1870, 1963, 2407
EcoT14I	CCWWGG	3 cut(s)	1462, 1681, 2538
EcoT22I	ATGCAT	1 cut(s)	593
EcoT38I	GRGCYC	3 cut(s)	165, 460, 2736
ErhI	CCWWGG	3 cut(s)	1462, 1681, 2538
Esp3I	CGTCTC	2 cut(s)	257, 945
FalI	AAGNNNNNCTT	5 cut(s)	924, 956, 2229, 2261, 2762
FaqI	GGGAC	1 cut(s)	283
FauNDI	CATATG	1 cut(s)	2146
FbaI	TGATCA	2 cut(s)	58, 336
FblI	GTMKAC	3 cut(s)	957, 1662, 2502
FriOI	GRGCYC	3 cut(s)	165, 460, 2736
GlaI	GCGC	8 cut(s)	91, 204, 448, 450, 732, 734, 985, 1772
GsaI	CCCAGC	1 cut(s)	1386
HaeIII	GGCC	6 cut(s)	468, 533, 551, 1027, 1241, 1541
HapII	CCGG	7 cut(s)	11, 206, 224, 378, 492, 1836, 2156
HgaI	GACGC	5 cut(s)	187, 354, 512, 2020, 2218
HhaI	GCGC	8 cut(s)	92, 205, 449, 451, 733, 735, 986, 1773
Hin1I	GRCGYC	2 cut(s)	5, 504
Hin6I	GCGC	8 cut(s)	90, 203, 447, 449, 731, 733, 984, 1771
HinP1I	GCGC	8 cut(s)	90, 203, 447, 449, 731, 733, 984, 1771
HincII	GTYRAC	2 cut(s)	2526, 2575
HindII	GTYRAC	2 cut(s)	2526, 2575
HindIII	AAGCTT	2 cut(s)	425, 1229
HinfI	GANTC	8 cut(s)	542, 605, 780, 1003, 1033, 2279, 2433, 2602
HpaII	CCGG	7 cut(s)	11, 206, 224, 378, 492, 1836, 2156
HphI	GGTGA	6 cut(s)	392, 1540, 1597, 1945, 2525, 2527
Hpy188III	TCNNGA	3 cut(s)	62, 676, 692
HpyAV	CCTTC	7 cut(s)	279, 412, 673, 746, 1030, 1499, 1569
HpyCH4III	ACNGT	4 cut(s)	1110, 1999, 2671, 2687
HpyCH4IV	ACGT	5 cut(s)	5, 302, 954, 1478, 1665
HpyF10VI	GCNNNNNNNGC	8 cut(s)	87, 318, 455, 520, 811, 841, 1211, 2719
HpyF3I	CTNAG	6 cut(s)	470, 815, 1957, 1979, 2037, 2735
HpySE526I	ACGT	5 cut(s)	5, 302, 954, 1478, 1665
Hsp92I	GRCGYC	2 cut(s)	5, 504
HspAI	GCGC	8 cut(s)	90, 203, 447, 449, 731, 733, 984, 1771
KroI	GCCGGC	1 cut(s)	10
KroNI	GCCGGC	1 cut(s)	12
Ksp22I	TGATCA	2 cut(s)	58, 336
LguI	GCTCTTC	1 cut(s)	396
LmnI	GCTCC	6 cut(s)	288, 309, 511, 1211, 2210, 2710
Lsp1109I	GCAGC	8 cut(s)	84, 207, 1181, 1201, 1214, 1571, 2127, 2322
LweI	GCATC	7 cut(s)	578, 718, 1984, 2506, 2665, 2682, 2709
MabI	ACCWGGT	1 cut(s)	141
MaeII	ACGT	5 cut(s)	5, 302, 954, 1478, 1665
MaeIII	GTNAC	7 cut(s)	151, 303, 1265, 1400, 1565, 2395, 2738
MfeI	CAATTG	3 cut(s)	926, 977, 1362
MflI	RGATCY	1 cut(s)	2239
MhlI	GDGCHC	4 cut(s)	165, 460, 2155, 2736
MlsI	TGGCCA	1 cut(s)	1541
MluI	ACGCGT	1 cut(s)	1626
MluNI	TGGCCA	1 cut(s)	1541
MlyI	GAGTC	4 cut(s)	551, 1012, 2442, 2596
MmeI	TCCRAC	4 cut(s)	396, 980, 1076, 1981
Mox20I	TGGCCA	1 cut(s)	1541
Mph1103I	ATGCAT	1 cut(s)	593
MreI	CGCCGGCG	1 cut(s)	10
MroNI	GCCGGC	1 cut(s)	10
MroXI	GAANNNNTTC	2 cut(s)	687, 1019
MscI	TGGCCA	1 cut(s)	1541
MslI	CAYNNNNRTG	8 cut(s)	188, 328, 596, 1063, 1276, 1933, 1980, 2332
Msp20I	TGGCCA	1 cut(s)	1541
MspI	CCGG	7 cut(s)	11, 206, 224, 378, 492, 1836, 2156
MspR9I	CCNGG	7 cut(s)	143, 535, 1141, 1836, 1872, 1965, 2409
MunI	CAATTG	3 cut(s)	926, 977, 1362
Mva1269I	GAATGC	2 cut(s)	282, 312
MvaI	CCWGG	6 cut(s)	143, 535, 1141, 1872, 1965, 2409
MvnI	CGCG	7 cut(s)	203, 365, 449, 733, 1092, 1628, 1773
MwoI	GCNNNNNNNGC	8 cut(s)	87, 318, 455, 520, 811, 841, 1211, 2719
NaeI	GCCGGC	1 cut(s)	12
NciI	CCSGG	1 cut(s)	1836
NcoI	CCATGG	3 cut(s)	1462, 1681, 2538
NdeI	CATATG	1 cut(s)	2146
NgoMIV	GCCGGC	1 cut(s)	10
NheI	GCTAGC	1 cut(s)	1555
NlaIV	GGNNCC	5 cut(s)	31, 1388, 1940, 2154, 2590
NmeAIII	GCCGAG	1 cut(s)	532
NmuCI	GTSAC	5 cut(s)	151, 303, 1400, 1565, 2738
NsiI	ATGCAT	1 cut(s)	593
NspI	RCATGY	2 cut(s)	1401, 1788
NspV	TTCGAA	1 cut(s)	1573
OliI	CACNNNNGTG	1 cut(s)	1063
PagI	TCATGA	2 cut(s)	61, 691
PauI	GCGCGC	2 cut(s)	447, 731
PciI	ACATGT	1 cut(s)	1784
PciSI	GCTCTTC	1 cut(s)	396
PcsI	WCGNNNNNNNCGW	5 cut(s)	11, 195, 350, 674, 1291
PctI	GAATGC	2 cut(s)	282, 312
PdiI	GCCGGC	1 cut(s)	12
PdmI	GAANNNNTTC	2 cut(s)	687, 1019
PfeI	GAWTC	4 cut(s)	605, 780, 1033, 2279
PflFI	GACNNNGTC	2 cut(s)	19, 185
PflMI	CCANNNNNTGG	1 cut(s)	142
PleI	GAGTC	4 cut(s)	550, 1011, 2441, 2596
PpsI	GAGTC	4 cut(s)	550, 1011, 2441, 2596
PscI	ACATGT	1 cut(s)	1784
PshAI	GACNNNNGTC	1 cut(s)	582
PshBI	ATTAAT	1 cut(s)	1329
PsiI	TTATAA	1 cut(s)	809
Psp124BI	GAGCTC	3 cut(s)	165, 460, 2736
Psp6I	CCWGG	6 cut(s)	141, 533, 1139, 1870, 1963, 2407
PspEI	GGTNACC	1 cut(s)	2395
PspFI	CCCAGC	1 cut(s)	1382
PspGI	CCWGG	6 cut(s)	141, 533, 1139, 1870, 1963, 2407
PspN4I	GGNNCC	5 cut(s)	31, 1388, 1940, 2154, 2590
PspPI	GGNCC	8 cut(s)	357, 494, 715, 1026, 1240, 1499, 2141, 2542
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	2 cut(s)	1012, 1964
PsuI	RGATCY	1 cut(s)	2239
PsyI	GACNNNGTC	2 cut(s)	19, 185
PteI	GCGCGC	2 cut(s)	447, 731
RsaI	GTAC	6 cut(s)	1481, 1697, 1736, 1883, 2299, 2777
RsaNI	GTAC	6 cut(s)	1480, 1696, 1735, 1882, 2298, 2776
RseI	CAYNNNNRTG	8 cut(s)	188, 328, 596, 1063, 1276, 1933, 1980, 2332
SacI	GAGCTC	3 cut(s)	165, 460, 2736
SapI	GCTCTTC	1 cut(s)	396
Sau96I	GGNCC	8 cut(s)	357, 494, 715, 1026, 1240, 1499, 2141, 2542
ScaI	AGTACT	1 cut(s)	2777
SchI	GAGTC	4 cut(s)	551, 1012, 2442, 2596
ScrFI	CCNGG	7 cut(s)	143, 535, 1141, 1836, 1872, 1965, 2409
SduI	GDGCHC	4 cut(s)	165, 460, 2155, 2736
SexAI	ACCWGGT	1 cut(s)	141
SfaNI	GCATC	7 cut(s)	578, 718, 1984, 2506, 2665, 2682, 2709
SfcI	CTRYAG	4 cut(s)	46, 967, 1215, 1356
SfuI	TTCGAA	1 cut(s)	1573
SgrAI	CRCCGGYG	2 cut(s)	10, 205
SinI	GGWCC	6 cut(s)	357, 494, 715, 1499, 2141, 2542
SmiMI	CAYNNNNRTG	8 cut(s)	188, 328, 596, 1063, 1276, 1933, 1980, 2332
SmlI	CTYRAG	1 cut(s)	2729
SmoI	CTYRAG	1 cut(s)	2729
SpeI	ACTAGT	2 cut(s)	2072, 2294
SstI	GAGCTC	3 cut(s)	165, 460, 2736
StyD4I	CCNGG	7 cut(s)	141, 533, 1139, 1834, 1870, 1963, 2407
StyI	CCWWGG	3 cut(s)	1462, 1681, 2538
TaaI	ACNGT	4 cut(s)	1110, 1999, 2671, 2687
TaiI	ACGT	5 cut(s)	8, 305, 957, 1481, 1668
TatI	WGTACW	5 cut(s)	1695, 1734, 1881, 2297, 2775
TauI	GCSGC	5 cut(s)	90, 321, 365, 655, 658
TfiI	GAWTC	4 cut(s)	605, 780, 1033, 2279
TscAI	CASTG	4 cut(s)	942, 1070, 1501, 1987
TseFI	GTSAC	5 cut(s)	151, 303, 1400, 1565, 2738
TseI	GCWGC	8 cut(s)	97, 195, 1169, 1202, 1214, 1559, 2115, 2310
Tsp45I	GTSAC	5 cut(s)	151, 303, 1400, 1565, 2738
TspDTI	ATGAA	9 cut(s)	466, 680, 861, 1297, 1367, 1976, 2040, 2054, 2457
TspGWI	ACGGA	4 cut(s)	322, 448, 573, 2111
TspRI	CASTG	4 cut(s)	942, 1070, 1501, 1987
Tth111I	GACNNNGTC	2 cut(s)	19, 185
Van91I	CCANNNNNTGG	1 cut(s)	142
VpaK11BI	GGWCC	6 cut(s)	357, 494, 715, 1499, 2141, 2542
VspI	ATTAAT	1 cut(s)	1329
XagI	CCTNNNNNAGG	1 cut(s)	146
XapI	RAATTY	8 cut(s)	741, 901, 1015, 1145, 1436, 1484, 1518, 2762
XceI	RCATGY	2 cut(s)	1401, 1788
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2564
XmiI	GTMKAC	3 cut(s)	957, 1662, 2502
XmnI	GAANNNNTTC	2 cut(s)	687, 1019
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	2777
Zsp2I	ATGCAT	1 cut(s)	593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.