Rw2G007750

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0003315
Physical Location & Seq
Reverse (-)
7581639 .. 7586414
4776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G007750.1

Sequence Viewer

Length: 2685 bp
ATGACGTCGCCGGCGACCCCGTCGTTTGGTTCCAAGCGATCAAACTACAGCTTACCTGATCATGATCGTCAGCACCACCGCCTTTGCGGCGCAATGCTGCCTATATTTCTCAACGACCTCACTAATCACAACAACCAAGACCTGGTTGAGGTCACACTAGAGCTCAACAACGACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGGCAACGACACGCCGGAGGAGGAGGAGGAGGAGGAAGAGGAGACGGGGACAGGAATGGTAGGAAGGAGCCTCTCCGCTACGTCACGGAGCATTCGCCGCACATTCGGGTGGCTGATCAGATCGTCGTCGTCGAGGACCGCCGCGTCTTCCAACTCGGGCGAACTCGCGCTTCCGCCACGAGAGGCGAGGAGGCTGAAGGCGAAGCTTCAACGGACAAGATCGAGCGCGCAAAGAGCTCTCAACGGCCTGAGGTTCATCAGCAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTGGAGGCCAGGTTCGAGTCGCTGGCCGTCCACGGATTGCTCGCCAGAGGAGACTTTGGTCGATGCATAGGGATGGCGGATTCGGAGGAGTTTGCGGTGGGGATATTTGACACGTTGGCGAGGAGGCGGCGGCAGAAAATTACGAAGATCACGAAGGAAGAACTTCATGATTTTTGGATACAAATCTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATCACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCAGCAAACAAGCTATCAAAGCTGAAAGAACAAGCTGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCCGAAAATTTTGGTTATATTGAGTTATGGCAATTGGAAGCACTGCTTTTACAAAGAGACGTATACATAAACTACAGCAGACCATTGAGCGCAGTAAGTGTAGGTTGGAGTCAGAACCTGAATTCCTTCAGGCCCAAGAATCTGCTTCGGAGACTAAATCGTTCACTTCAGTGTCTCATACTAGACAATTTGCAACGCGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCTCTTTTTTCCTGGAAATTCTTCCAATACAGAAACAAAGCAGCATTTGAAGTCATCGGCTATTGCTTGCCAGCAGCCAAAGGAGCTGCAGAAACTTTGAAGCTTAACATGGCCCTCATCCTTTTACCTGTTTGTCGTAACACATTGACATGGCTTCGATCAACGCGAGCTAGGTTCTTCATTCCCTTTGATGACAACATTAATTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCATGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAACTCATCTGCGGAAGAATTTGAGCCAATATCCTCTGATTTCCATGGCAAAAAGCCGACGTACAAATTCTTATTCACTGGACCAGAAGGCTTGACTGGAATTCTGATGGTGATTTTTATGGCCATCTCATTCACGCTAGCAGCGAGTCACTTTCGAAGGAACATGGTGAGGCTTCCTGCCCCCTTGAACAAACTGACTGGGTTTAATGCGTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCATGGAAGCTGTTTGTACTTTGTCCACGAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATTCAGTTAAGATACTAAAGGCTACAATCTTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGCGGACAATACATATTTCTACAATGCCCAACAATCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCAGCACCTGGGGATGAGCATCTCAGTGTTCATATCCGAACAGTTGGTGACTGGACTCAAGAATTGAAGCGAGCCATTTCTGAGGGAGATCATTCATTATCTTTAGTTCATCGGACTAGTGACTACCGCAACTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACCCCTTTTGTAAGCGTCCTTAAAGATCTTCTTAACAGCACAAGAACAGCAGAAGAACAACTGGATTCAAATACAGAAACTAGTACACCATCAGGCAGCCTAAATAGTTTTACATCATCATGTTTGACACCAAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAGGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACGAGTGTCTACGAAGAGGGTGATGCAAGGTCAACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGAGTTGACATCCTATCTGGCACCAGAGTAATGACTCATTTTGCAAGACCTAATTGGAAAGAAGTGTTTACCAAGATAGCTTCCAAGCATCCATTTTCGACAGTAGGGGTATTCTACTGTGGGATGCCAATGTTGGCAAAGGAGCTGAAGATGCTATCACTTGAGCTCAGTCACAAGACATCGACACGCTTTGAATTCCACAAGGAGTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

894

Amino Acids

101.58

Weight (kDa)

7.92

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 138 - 240 1.3e-38 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 408 - 554 1.9e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 597 - 679 1.3e-26 FAD-binding domain
NAD_binding_6 PF08030 693 - 875 3.3e-48 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
AasI GACNNNNNNGTC 1 cut(s) 352
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 2 cut(s) 1926, 2489
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 3 cut(s) 945, 1650, 2403
AccII CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
AclWI GGATC 1 cut(s) 2367
AcoI YGGCCR 2 cut(s) 537, 1527
AcsI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2663
AcuI CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2636
AcyI GRCGYC 2 cut(s) 5, 492
AfaI GTAC 6 cut(s) 1469, 1685, 1724, 1871, 2200, 2678
AfiI CCNNNNNNNGG 3 cut(s) 26, 142, 148
AflIII ACRYGT 2 cut(s) 624, 1772
AhlI ACTAGT 2 cut(s) 2060, 2195
AjnI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2308
AleI CACNNNNGTG 1 cut(s) 1051
AloI GAACNNNNNNTCC 6 cut(s) 509, 541, 989, 1021, 1347, 1379
Alw21I GWGCWC 3 cut(s) 165, 448, 2637
Alw26I GTCTC 5 cut(s) 245, 558, 933, 1027, 1061
AlwI GGATC 1 cut(s) 2367
AlwNI CAGNNNCTG 2 cut(s) 1000, 1952
Ama87I CYCGRG 1 cut(s) 364
AoxI GGCC 6 cut(s) 454, 519, 537, 1013, 1227, 1527
ApeKI GCWGC 7 cut(s) 97, 195, 1157, 1190, 1202, 1547, 2211
ApoI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2663
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
AseI ATTAAT 1 cut(s) 1317
Asp700I GAANNNNTTC 3 cut(s) 675, 1007, 1136
AspLEI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
AspS9I GGNCC 7 cut(s) 345, 482, 703, 1014, 1228, 1487, 2443
AsuC2I CCSGG 1 cut(s) 1824
AsuHPI GGTGA 6 cut(s) 1528, 1585, 1933, 2003, 2426, 2428
AsuII TTCGAA 1 cut(s) 1561
AsuNHI GCTAGC 1 cut(s) 1543
AvaI CYCGRG 1 cut(s) 364
AvaII GGWCC 5 cut(s) 345, 482, 703, 1487, 2443
AxyI CCTNAGG 1 cut(s) 458
BalI TGGCCA 1 cut(s) 1529
BanI GGYRCC 2 cut(s) 1926, 2489
BanII GRGCYC 3 cut(s) 165, 448, 2637
BauI CACGAG 2 cut(s) 387, 1694
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 3 cut(s) 165, 448, 2637
BbvCI CCTCAGC 1 cut(s) 1945
BbvI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1202, 1559, 2223
BccI CCATC 6 cut(s) 580, 755, 1507, 1538, 1946, 2212
BceAI ACGGC 2 cut(s) 469, 524
BciT130I CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2310
BciVI GTATCC 2 cut(s) 684, 1775
BclI TGATCA 2 cut(s) 58, 324
BcnI CCSGG 1 cut(s) 1824
BcoDI GTCTC 5 cut(s) 245, 558, 933, 1027, 1061
BcuI ACTAGT 2 cut(s) 2060, 2195
BfmI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BfuI GTATCC 2 cut(s) 684, 1775
BglI GCCNNNNNGGC 1 cut(s) 87
BglII AGATCT 1 cut(s) 2140
BmcAI AGTACT 1 cut(s) 2678
Bme1390I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2310
Bme18I GGWCC 5 cut(s) 345, 482, 703, 1487, 2443
BmeT110I CYCGRG 1 cut(s) 364
BmgT120I GGNCC 7 cut(s) 345, 482, 703, 1014, 1228, 1487, 2443
BmiI GGNNCC 5 cut(s) 31, 278, 1376, 1928, 2491
BmrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2310
BmrI ACTGGG 1 cut(s) 1614
BmsI GCATC 7 cut(s) 566, 706, 1972, 2407, 2566, 2583, 2610
BmtI GCTAGC 1 cut(s) 1547
BmuI ACTGGG 1 cut(s) 1614
BoxI GACNNNNGTC 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 348
Bpu10I CCTNAGC 1 cut(s) 1945
Bpu14I TTCGAA 1 cut(s) 1561
BpuEI CTTGAG 2 cut(s) 1986, 2651
BpuMI CCSGG 1 cut(s) 1824
BsaBI GATNNNNATC 4 cut(s) 63, 695, 1724, 1962
BsaHI GRCGYC 2 cut(s) 5, 492
BsaJI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2439
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 142, 148
Bse118I RCCGGY 2 cut(s) 10, 205
Bse1I ACTGG 5 cut(s) 1489, 1507, 1609, 2000, 2181
Bse21I CCTNAGG 1 cut(s) 458
Bse3DI GCAATG 3 cut(s) 99, 760, 1116
Bse8I GATNNNNATC 4 cut(s) 63, 695, 1724, 1962
BseBI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2310
BseDI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2439
BseJI GATNNNNATC 4 cut(s) 63, 695, 1724, 1962
BseLI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BseMI GCAATG 3 cut(s) 99, 760, 1116
BseMII CTCAG 6 cut(s) 449, 794, 1959, 1981, 2016, 2650
BseNI ACTGG 5 cut(s) 1489, 1507, 1609, 2000, 2181
BsePI GCGCGC 2 cut(s) 435, 719
BseXI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1202, 1559, 2223
BseYI CCCAGC 1 cut(s) 1370
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
BshFI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BshNI GGYRCC 2 cut(s) 1926, 2489
BsiHKAI GWGCWC 3 cut(s) 165, 448, 2637
BsiHKCI CYCGRG 1 cut(s) 364
BsiSI CCGG 5 cut(s) 11, 206, 224, 480, 1824
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BsmAI GTCTC 5 cut(s) 245, 558, 933, 1027, 1061
BsmBI CGTCTC 2 cut(s) 245, 933
BsmFI GGGAC 1 cut(s) 271
BsmI GAATGC 1 cut(s) 300
BsnI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BsoBI CYCGRG 1 cut(s) 364
Bsp119I TTCGAA 1 cut(s) 1561
Bsp1286I GDGCHC 3 cut(s) 165, 448, 2637
Bsp1407I TGTACA 1 cut(s) 1722
Bsp19I CCATGG 3 cut(s) 1450, 1669, 2439
BspANI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BspCNI CTCAG 6 cut(s) 450, 795, 1958, 1980, 2017, 2649
BspFNI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
BspHI TCATGA 2 cut(s) 61, 679
BspLI GGNNCC 5 cut(s) 31, 278, 1376, 1928, 2491
BspMAI CTGCAG 1 cut(s) 1207
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 1 cut(s) 2367
BspT104I TTCGAA 1 cut(s) 1561
BspT107I GGYRCC 2 cut(s) 1926, 2489
BsrDI GCAATG 3 cut(s) 99, 760, 1116
BsrFI RCCGGY 2 cut(s) 10, 205
BsrGI TGTACA 1 cut(s) 1722
BsrI ACTGG 5 cut(s) 1489, 1507, 1609, 2000, 2181
BssAI RCCGGY 2 cut(s) 10, 205
BssECI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2439
BssHII GCGCGC 2 cut(s) 435, 719
BssNAI GTATAC 1 cut(s) 946
BssNI GRCGYC 2 cut(s) 5, 492
BssSI CACGAG 2 cut(s) 387, 1694
BssT1I CCWWGG 3 cut(s) 1450, 1669, 2439
Bst1107I GTATAC 1 cut(s) 946
Bst2BI CACGAG 2 cut(s) 387, 1694
Bst2UI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2310
Bst4CI ACNGT 4 cut(s) 1098, 1987, 2572, 2588
Bst6I CTCTTC 2 cut(s) 240, 2403
BstACI GRCGYC 2 cut(s) 5, 492
BstAUI TGTACA 1 cut(s) 1722
BstBI TTCGAA 1 cut(s) 1561
BstDEI CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2636
BstDSI CCRYGG 4 cut(s) 544, 1450, 1669, 2439
BstEII GGTNACC 1 cut(s) 2296
BstENI CCTNNNNNAGG 1 cut(s) 146
BstFNI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
BstHHI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
BstMAI GTCTC 5 cut(s) 245, 558, 933, 1027, 1061
BstMWI GCNNNNNNNGC 8 cut(s) 87, 306, 443, 508, 799, 829, 1199, 2620
BstNI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2310
BstNSI RCATGY 2 cut(s) 1389, 1776
BstPAI GACNNNNGTC 1 cut(s) 570
BstPI GGTNACC 1 cut(s) 2296
BstSCI CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2308
BstSFI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BstUI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
BstV1I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1202, 1559, 2223
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 2140
BstXI CCANNNNNNTGG 1 cut(s) 1923
BstYI RGATCY 1 cut(s) 2140
BstZ17I GTATAC 1 cut(s) 946
Bsu36I CCTNAGG 1 cut(s) 458
BsuI GTATCC 2 cut(s) 684, 1775
BsuRI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BtgI CCRYGG 4 cut(s) 544, 1450, 1669, 2439
BtsI GCAGTG 1 cut(s) 923
BtsIMutI CAGTG 4 cut(s) 923, 1058, 1482, 1975
CaiI CAGNNNCTG 2 cut(s) 1000, 1952
CciI TCATGA 2 cut(s) 61, 679
CfoI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Cfr10I RCCGGY 2 cut(s) 10, 205
Cfr13I GGNCC 7 cut(s) 345, 482, 703, 1014, 1228, 1487, 2443
CseI GACGC 4 cut(s) 187, 342, 500, 2119
CsiI ACCWGGT 1 cut(s) 141
Csp6I GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2199, 2677
CspCI CAANNNNNGTGG 2 cut(s) 65, 100
CviQI GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2199, 2677
DdeI CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2636
DrdI GACNNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 2 cut(s) 537, 1527
Eam1104I CTCTTC 2 cut(s) 240, 2403
EarI CTCTTC 2 cut(s) 240, 2403
EciI GGCGGA 2 cut(s) 372, 605
Ecl136II GAGCTC 3 cut(s) 163, 446, 2635
Eco130I CCWWGG 3 cut(s) 1450, 1669, 2439
Eco24I GRGCYC 3 cut(s) 165, 448, 2637
Eco47I GGWCC 5 cut(s) 345, 482, 703, 1487, 2443
Eco53kI GAGCTC 3 cut(s) 163, 446, 2635
Eco57I CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2636
Eco81I CCTNAGG 1 cut(s) 458
Eco88I CYCGRG 1 cut(s) 364
Eco91I GGTNACC 1 cut(s) 2296
EcoICRI GAGCTC 3 cut(s) 163, 446, 2635
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoO65I GGTNACC 1 cut(s) 2296
EcoRI GAATTC 3 cut(s) 1003, 1506, 2663
EcoRII CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2308
EcoT14I CCWWGG 3 cut(s) 1450, 1669, 2439
EcoT22I ATGCAT 1 cut(s) 581
EcoT38I GRGCYC 3 cut(s) 165, 448, 2637
ErhI CCWWGG 3 cut(s) 1450, 1669, 2439
Esp3I CGTCTC 2 cut(s) 245, 933
FalI AAGNNNNNCTT 5 cut(s) 912, 944, 2130, 2162, 2663
FaqI GGGAC 1 cut(s) 271
FbaI TGATCA 2 cut(s) 58, 324
FblI GTMKAC 3 cut(s) 945, 1650, 2403
FriOI GRGCYC 3 cut(s) 165, 448, 2637
GlaI GCGC 9 cut(s) 91, 204, 378, 436, 438, 720, 722, 973, 1760
GsaI CCCAGC 1 cut(s) 1374
HaeIII GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
HapII CCGG 5 cut(s) 11, 206, 224, 480, 1824
HgaI GACGC 4 cut(s) 187, 342, 500, 2119
HhaI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Hin1I GRCGYC 2 cut(s) 5, 492
Hin6I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HinP1I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HincII GTYRAC 2 cut(s) 2427, 2476
HindII GTYRAC 2 cut(s) 2427, 2476
HindIII AAGCTT 2 cut(s) 413, 1217
HpaII CCGG 5 cut(s) 11, 206, 224, 480, 1824
HphI GGTGA 6 cut(s) 1528, 1585, 1933, 2003, 2426, 2428
Hpy188III TCNNGA 4 cut(s) 62, 664, 680, 2003
HpyAV CCTTC 7 cut(s) 267, 400, 661, 734, 1018, 1487, 1557
HpyCH4III ACNGT 4 cut(s) 1098, 1987, 2572, 2588
HpyCH4IV ACGT 6 cut(s) 5, 290, 626, 942, 1466, 1653
HpyCH4V TGCA 9 cut(s) 195, 579, 787, 1075, 1109, 1205, 1337, 2420, 2513
HpyF10VI GCNNNNNNNGC 8 cut(s) 87, 306, 443, 508, 799, 829, 1199, 2620
HpyF3I CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2636
HpySE526I ACGT 6 cut(s) 5, 290, 626, 942, 1466, 1653
Hsp92I GRCGYC 2 cut(s) 5, 492
HspAI GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 58, 324
LmnI GCTCC 6 cut(s) 276, 297, 499, 1199, 2111, 2611
Lsp1109I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1202, 1559, 2223
LweI GCATC 7 cut(s) 566, 706, 1972, 2407, 2566, 2583, 2610
MabI ACCWGGT 1 cut(s) 141
MaeII ACGT 6 cut(s) 5, 290, 626, 942, 1466, 1653
MaeIII GTNAC 9 cut(s) 151, 291, 1253, 1388, 1553, 1991, 2063, 2296, 2639
MfeI CAATTG 2 cut(s) 914, 1350
MflI RGATCY 1 cut(s) 2140
MhlI GDGCHC 3 cut(s) 165, 448, 2637
MlsI TGGCCA 1 cut(s) 1529
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 6 cut(s) 539, 1000, 1561, 1993, 2343, 2497
MmeI TCCRAC 3 cut(s) 384, 968, 1064
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 581
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 3 cut(s) 675, 1007, 1136
MscI TGGCCA 1 cut(s) 1529
MslI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2233
Msp20I TGGCCA 1 cut(s) 1529
MspI CCGG 5 cut(s) 11, 206, 224, 480, 1824
MspR9I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2310
MunI CAATTG 2 cut(s) 914, 1350
Mva1269I GAATGC 1 cut(s) 300
MvaI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2310
MvnI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 1282
MwoI GCNNNNNNNGC 8 cut(s) 87, 306, 443, 508, 799, 829, 1199, 2620
NaeI GCCGGC 1 cut(s) 12
NciI CCSGG 1 cut(s) 1824
NcoI CCATGG 3 cut(s) 1450, 1669, 2439
NgoMIV GCCGGC 1 cut(s) 10
NheI GCTAGC 1 cut(s) 1543
NlaIV GGNNCC 5 cut(s) 31, 278, 1376, 1928, 2491
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 7 cut(s) 151, 291, 1388, 1553, 1991, 2063, 2639
NsiI ATGCAT 1 cut(s) 581
NspI RCATGY 2 cut(s) 1389, 1776
NspV TTCGAA 1 cut(s) 1561
OliI CACNNNNGTG 1 cut(s) 1051
PagI TCATGA 2 cut(s) 61, 679
PauI GCGCGC 2 cut(s) 435, 719
PciI ACATGT 1 cut(s) 1772
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 195, 338, 662, 1279, 1547
PctI GAATGC 1 cut(s) 300
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 3 cut(s) 675, 1007, 1136
PfeI GAWTC 4 cut(s) 593, 768, 1021, 2180
PflFI GACNNNGTC 2 cut(s) 19, 185
PflMI CCANNNNNTGG 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 1127
PleI GAGTC 6 cut(s) 538, 999, 1560, 1993, 2342, 2497
PpsI GAGTC 6 cut(s) 538, 999, 1560, 1993, 2342, 2497
PscI ACATGT 1 cut(s) 1772
PshAI GACNNNNGTC 1 cut(s) 570
PshBI ATTAAT 1 cut(s) 1317
PsiI TTATAA 1 cut(s) 797
Psp124BI GAGCTC 3 cut(s) 165, 448, 2637
Psp6I CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2308
PspEI GGTNACC 1 cut(s) 2296
PspFI CCCAGC 1 cut(s) 1370
PspGI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2308
PspN4I GGNNCC 5 cut(s) 31, 278, 1376, 1928, 2491
PspPI GGNCC 7 cut(s) 345, 482, 703, 1014, 1228, 1487, 2443
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 1000, 1952
PsuI RGATCY 1 cut(s) 2140
PsyI GACNNNGTC 2 cut(s) 19, 185
PteI GCGCGC 2 cut(s) 435, 719
RsaI GTAC 6 cut(s) 1469, 1685, 1724, 1871, 2200, 2678
RsaNI GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2199, 2677
RseI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2233
SacI GAGCTC 3 cut(s) 165, 448, 2637
Sau96I GGNCC 7 cut(s) 345, 482, 703, 1014, 1228, 1487, 2443
ScaI AGTACT 1 cut(s) 2678
SchI GAGTC 6 cut(s) 539, 1000, 1561, 1993, 2343, 2497
ScrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2310
SduI GDGCHC 3 cut(s) 165, 448, 2637
SexAI ACCWGGT 1 cut(s) 141
SfaNI GCATC 7 cut(s) 566, 706, 1972, 2407, 2566, 2583, 2610
SfcI CTRYAG 4 cut(s) 46, 955, 1203, 1344
SfuI TTCGAA 1 cut(s) 1561
SgrAI CRCCGGYG 2 cut(s) 10, 205
SinI GGWCC 5 cut(s) 345, 482, 703, 1487, 2443
SmiMI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2233
SmlI CTYRAG 2 cut(s) 2001, 2630
SmoI CTYRAG 2 cut(s) 2001, 2630
SpeI ACTAGT 2 cut(s) 2060, 2195
SstI GAGCTC 3 cut(s) 165, 448, 2637
StyD4I CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2308
StyI CCWWGG 3 cut(s) 1450, 1669, 2439
TaaI ACNGT 4 cut(s) 1098, 1987, 2572, 2588
TaiI ACGT 6 cut(s) 8, 293, 629, 945, 1469, 1656
TatI WGTACW 5 cut(s) 1683, 1722, 1869, 2198, 2676
TauI GCSGC 5 cut(s) 90, 309, 353, 643, 646
TfiI GAWTC 4 cut(s) 593, 768, 1021, 2180
TscAI CASTG 4 cut(s) 930, 1058, 1489, 1975
TseFI GTSAC 7 cut(s) 151, 291, 1388, 1553, 1991, 2063, 2639
TseI GCWGC 7 cut(s) 97, 195, 1157, 1190, 1202, 1547, 2211
Tsp45I GTSAC 7 cut(s) 151, 291, 1388, 1553, 1991, 2063, 2639
TspDTI ATGAA 9 cut(s) 454, 668, 849, 1285, 1355, 1964, 2028, 2042, 2358
TspGWI ACGGA 3 cut(s) 310, 436, 561
TspRI CASTG 4 cut(s) 930, 1058, 1489, 1975
Tth111I GACNNNGTC 2 cut(s) 19, 185
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 5 cut(s) 345, 482, 703, 1487, 2443
VspI ATTAAT 1 cut(s) 1317
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2663
XceI RCATGY 2 cut(s) 1389, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 2465
XmiI GTMKAC 3 cut(s) 945, 1650, 2403
XmnI GAANNNNTTC 3 cut(s) 675, 1007, 1136
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 2678
Zsp2I ATGCAT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.