RchiOBHm_Chr2g0095831

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0003315
Physical Location & Seq
Reverse (-)
8765834 .. 8770818
4985 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47080

Sequence Viewer

Length: 2772 bp
ATGACGTCGCCGGCGACCCCGTCGTTTGGTTCCAAGCGATCAAACTACAGCTTACCTGATCATGATCGTCAGCACCACCGCCTTTGCGGCGCAATGCTGCCTATATTTCTCAACGACCTCACTAATCACAACAACCAAGACCTGGTTGAGGTCACACTAGAGCTCAACAACGACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGGGAACGACACGCAGGAGGAGGAGGAGGAGGAGGAAGAGGAGACGGGGACAGGAATGCTAGGAAGGAGCCTCTCCGCTACGTCACGGAGCATTCGCCGCACATTCGGGTGGCTGATCAGATCGTCGTCGTCGAGGACCACCGCGTCTTCCAACTCCGGCGAACTCGCGCTTCCGCCACGAGAGGCGAGGAGGCTGAAGGCGAAGCTTCAACGGACAAGATCGAGCGCGCAAAGAGCTCTCAACGGCCTGAGGTTCATCAGCAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTGGAGGCCAGGTTCGAGTCGCTGGCCGTCCACGGATTGCTCGCCAGAGGAGACTTTGGTCGATGCATAGGGATGGAGGACTCGGAGGAGTTTGCGGTGGGGATATTTGACACATTGGCGAGGAGGCGGCGGCAGAAAATTACGAAGATCACGAAGGAAGAACTTCATGATTTTTGGATACAAATCTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATCACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCAGCAAACAAGCTATCAAAGCTGAAAGAACAAGCTGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCCGAAAATTTTGGTTATATTGAGTTATGGCAATTGGAAGCACTGCTTTTACAAAGAGACGTATACATAAACTACAGCAGACCATTGAGCGCAGTAAGCGTAGGTTGGAGTCAGAACCTGAATTCCTTCAGGCCCAAGAATCTGCTTCGGAGACTAAATCGTTCACTTCAGTGTCTCATACTAGACAATTTGCAACGCGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCACTTTTTGCCTGGAAATTCTACCAATACAGAAACAAAGCAGCATTTGAAGTCATCGGCTATTGCTTGCCAGTAGCCAAAGGAGCTGCAGAAACTTTGAAGCTTAACATGGCCCTCATCCTTTTACCTGTTTGTCGTAACACATTGACATGGCTTCGATCAACACGAGCTAGGTTCTTCATTCCCTTTGATGACAACATTAATTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCACGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAACTCATCTGCGGAAGAATTTGAGCCAATATCCTCTGATTTCCATGGCAAAAACCCGACGTACAAATTCTTATTCACTGGACCAGAAGGCGTGACTGGAATTCTGATGGTGATTTTTATGGCCATCTCATTCACGCTAGCAGCGAGTCACTTTCGAAGGAACATGGTGAGGCTTCCTGCCCCCTTGAACAAACTGACTGGGTTTAATGCGTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCATGGAAGCTGTTTGTACTTTGTCCACAAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATTCAGTTAAGATACTAAAGGCTACAATCTTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGTGGACAATACATATTTCTACAATGCCCAACAATCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCAGCACCTGGGGATGAGCATCTCAGTGTTCATATCCGAACAGTTGGAGACTGGACACAAGAATTGAAGCGAGCCATTTCTGAGGGAGATCATTCATTATCTTTAGTTCATCGGACTAGTGTTGCTCAGCCACAAGATATGGATCAAATAAGATTATGCAGCCAACCCAAATTGTTTTTTGATGGTCCATATGGGGCACCGGCACAGGACTACCGCAACTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACCCCTTTTGTAAGCGTCCTTAAAGATCTTCTTAACAGCACAAGAACAGCAGAAGAACAACTGGATTCAAATACAGAAACTAGTACACCATCAGGCAGCCTAAATAGTTTTACATCATCGTGTTTGACACCCAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAAGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACAAGTGTCTACGAAGAGGGTGATGCAAGGTCAACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGAGTTGACATCCTATCTGGCACCAGAGTAATGACTCATTTTGCAAGACCTAATTGGAAAGAAGTGTTTACCAAGATAGCTTCCAAGCATCCATTTTCGACAGTAGGGGTATTCTACTGTGGGATGCCAATGTTGGCAAAGGAGCTGAAGATGCTATCACTTGAGCTCAGTCACAAGACATCGACACGCTTTGAATTCCACAAGGAGTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

923

Amino Acids

104.91

Weight (kDa)

7.65

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 138 - 240 8e-39 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 408 - 554 2.6e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 597 - 716 1.1e-30 FAD-binding domain
NAD_binding_6 PF08030 722 - 904 3.5e-48 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
AasI GACNNNNNNGTC 1 cut(s) 352
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 1926, 2140, 2576
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 3 cut(s) 945, 1650, 2490
AccII CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
AclWI GGATC 2 cut(s) 2094, 2454
AcoI YGGCCR 2 cut(s) 537, 1527
AcsI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2750
AcuI CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2723
AcyI GRCGYC 2 cut(s) 5, 492
AfaI GTAC 6 cut(s) 1469, 1685, 1724, 1871, 2287, 2765
AfiI CCNNNNNNNGG 3 cut(s) 26, 142, 148
AflIII ACRYGT 1 cut(s) 1772
AhlI ACTAGT 2 cut(s) 2060, 2282
AjnI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
AleI CACNNNNGTG 1 cut(s) 1051
AloI GAACNNNNNNTCC 6 cut(s) 509, 541, 989, 1021, 1347, 1379
Alw21I GWGCWC 3 cut(s) 165, 448, 2724
Alw26I GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
AlwI GGATC 2 cut(s) 2094, 2454
AlwNI CAGNNNCTG 2 cut(s) 1000, 1952
AoxI GGCC 6 cut(s) 454, 519, 537, 1013, 1227, 1527
ApeKI GCWGC 7 cut(s) 97, 195, 1157, 1202, 1547, 2103, 2298
ApoI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2750
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
AseI ATTAAT 1 cut(s) 1317
Asp700I GAANNNNTTC 2 cut(s) 675, 1007
AspLEI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
AspS9I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
AsuC2I CCSGG 1 cut(s) 1824
AsuHPI GGTGA 5 cut(s) 1528, 1585, 1933, 2513, 2515
AsuII TTCGAA 1 cut(s) 1561
AsuNHI GCTAGC 1 cut(s) 1543
AvaII GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
AxyI CCTNAGG 1 cut(s) 458
BaeGI GKGCMC 1 cut(s) 2143
BalI TGGCCA 1 cut(s) 1529
BanI GGYRCC 3 cut(s) 1926, 2140, 2576
BanII GRGCYC 3 cut(s) 165, 448, 2724
BauI CACGAG 2 cut(s) 387, 1281
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 3 cut(s) 165, 448, 2724
BbvCI CCTCAGC 1 cut(s) 1945
BbvI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BccI CCATC 7 cut(s) 580, 755, 1507, 1538, 1946, 2120, 2299
BceAI ACGGC 2 cut(s) 469, 524
BciT130I CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BciVI GTATCC 2 cut(s) 684, 1775
BclI TGATCA 2 cut(s) 58, 324
BcnI CCSGG 1 cut(s) 1824
BcoDI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BcuI ACTAGT 2 cut(s) 2060, 2282
BfmI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BfuI GTATCC 2 cut(s) 684, 1775
BglI GCCNNNNNGGC 1 cut(s) 87
BglII AGATCT 1 cut(s) 2227
BlpI GCTNAGC 1 cut(s) 2070
BmcAI AGTACT 1 cut(s) 2765
Bme1390I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
Bme18I GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
BmgT120I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
BmiI GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
BmrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
BmrI ACTGGG 1 cut(s) 1614
BmsI GCATC 7 cut(s) 566, 706, 1972, 2494, 2653, 2670, 2697
BmtI GCTAGC 1 cut(s) 1547
BmuI ACTGGG 1 cut(s) 1614
BoxI GACNNNNGTC 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 348
Bpu10I CCTNAGC 1 cut(s) 1945
Bpu1102I GCTNAGC 1 cut(s) 2070
Bpu14I TTCGAA 1 cut(s) 1561
BpuEI CTTGAG 1 cut(s) 2738
BpuMI CCSGG 1 cut(s) 1824
BsaBI GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BsaHI GRCGYC 2 cut(s) 5, 492
BsaJI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 142, 148
Bse118I RCCGGY 3 cut(s) 10, 205, 2143
Bse1I ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
Bse21I CCTNAGG 1 cut(s) 458
Bse3DI GCAATG 3 cut(s) 99, 760, 1116
Bse8I GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BseBI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BseDI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BseJI GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BseLI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BseMI GCAATG 3 cut(s) 99, 760, 1116
BseMII CTCAG 7 cut(s) 449, 794, 1959, 1981, 2016, 2084, 2737
BseNI ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
BsePI GCGCGC 2 cut(s) 435, 719
BseSI GKGCMC 1 cut(s) 2143
BseXI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BseYI CCCAGC 1 cut(s) 1370
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
BshFI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BshNI GGYRCC 3 cut(s) 1926, 2140, 2576
BsiHKAI GWGCWC 3 cut(s) 165, 448, 2724
BsiSI CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BsmAI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BsmBI CGTCTC 2 cut(s) 245, 933
BsmFI GGGAC 1 cut(s) 271
BsmI GAATGC 2 cut(s) 270, 300
BsnI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
Bsp119I TTCGAA 1 cut(s) 1561
Bsp1286I GDGCHC 4 cut(s) 165, 448, 2143, 2724
Bsp1407I TGTACA 1 cut(s) 1722
Bsp1720I GCTNAGC 1 cut(s) 2070
Bsp19I CCATGG 3 cut(s) 1450, 1669, 2526
BspANI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BspCNI CTCAG 7 cut(s) 450, 795, 1958, 1980, 2017, 2083, 2736
BspFNI CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
BspHI TCATGA 2 cut(s) 61, 679
BspLI GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
BspMAI CTGCAG 1 cut(s) 1207
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 2 cut(s) 2094, 2454
BspT104I TTCGAA 1 cut(s) 1561
BspT107I GGYRCC 3 cut(s) 1926, 2140, 2576
BsrDI GCAATG 3 cut(s) 99, 760, 1116
BsrFI RCCGGY 3 cut(s) 10, 205, 2143
BsrGI TGTACA 1 cut(s) 1722
BsrI ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
BssAI RCCGGY 3 cut(s) 10, 205, 2143
BssECI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BssHII GCGCGC 2 cut(s) 435, 719
BssNAI GTATAC 1 cut(s) 946
BssNI GRCGYC 2 cut(s) 5, 492
BssSI CACGAG 2 cut(s) 387, 1281
BssT1I CCWWGG 3 cut(s) 1450, 1669, 2526
Bst1107I GTATAC 1 cut(s) 946
Bst2BI CACGAG 2 cut(s) 387, 1281
Bst2UI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
Bst4CI ACNGT 4 cut(s) 1098, 1987, 2659, 2675
Bst6I CTCTTC 2 cut(s) 240, 2490
BstACI GRCGYC 2 cut(s) 5, 492
BstAUI TGTACA 1 cut(s) 1722
BstBI TTCGAA 1 cut(s) 1561
BstC8I GCNNGC 8 cut(s) 12, 437, 537, 555, 721, 1184, 1545, 2016
BstDEI CTNAG 7 cut(s) 458, 803, 1945, 1967, 2025, 2070, 2723
BstDSI CCRYGG 4 cut(s) 544, 1450, 1669, 2526
BstEII GGTNACC 1 cut(s) 2383
BstENI CCTNNNNNAGG 1 cut(s) 146
BstFNI CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
BstHHI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
BstMAI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BstMWI GCNNNNNNNGC 9 cut(s) 87, 306, 443, 508, 799, 829, 978, 1199, 2707
BstNI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BstNSI RCATGY 2 cut(s) 1389, 1776
BstPAI GACNNNNGTC 1 cut(s) 570
BstPI GGTNACC 1 cut(s) 2383
BstSCI CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2395
BstSFI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BstSLI GKGCMC 1 cut(s) 2143
BstUI CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
BstV1I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 2227
BstXI CCANNNNNNTGG 1 cut(s) 1923
BstYI RGATCY 1 cut(s) 2227
BstZ17I GTATAC 1 cut(s) 946
Bsu36I CCTNAGG 1 cut(s) 458
BsuI GTATCC 2 cut(s) 684, 1775
BsuRI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BtgI CCRYGG 4 cut(s) 544, 1450, 1669, 2526
BtsI GCAGTG 1 cut(s) 923
BtsIMutI CAGTG 4 cut(s) 923, 1058, 1482, 1975
Cac8I GCNNGC 8 cut(s) 12, 437, 537, 555, 721, 1184, 1545, 2016
CaiI CAGNNNCTG 2 cut(s) 1000, 1952
CciI TCATGA 2 cut(s) 61, 679
CfoI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Cfr10I RCCGGY 3 cut(s) 10, 205, 2143
Cfr13I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
CseI GACGC 4 cut(s) 187, 342, 500, 2206
CsiI ACCWGGT 1 cut(s) 141
Csp6I GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2286, 2764
CspCI CAANNNNNGTGG 2 cut(s) 65, 100
CviQI GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2286, 2764
DdeI CTNAG 7 cut(s) 458, 803, 1945, 1967, 2025, 2070, 2723
DraI TTTAAA 1 cut(s) 2416
DrdI GACNNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 2 cut(s) 537, 1527
Eam1104I CTCTTC 2 cut(s) 240, 2490
EarI CTCTTC 2 cut(s) 240, 2490
EciI GGCGGA 1 cut(s) 372
Ecl136II GAGCTC 3 cut(s) 163, 446, 2722
Eco130I CCWWGG 3 cut(s) 1450, 1669, 2526
Eco24I GRGCYC 3 cut(s) 165, 448, 2724
Eco47I GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
Eco53kI GAGCTC 3 cut(s) 163, 446, 2722
Eco57I CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2723
Eco81I CCTNAGG 1 cut(s) 458
Eco91I GGTNACC 1 cut(s) 2383
EcoICRI GAGCTC 3 cut(s) 163, 446, 2722
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoO65I GGTNACC 1 cut(s) 2383
EcoRI GAATTC 3 cut(s) 1003, 1506, 2750
EcoRII CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
EcoT14I CCWWGG 3 cut(s) 1450, 1669, 2526
EcoT22I ATGCAT 1 cut(s) 581
EcoT38I GRGCYC 3 cut(s) 165, 448, 2724
ErhI CCWWGG 3 cut(s) 1450, 1669, 2526
Esp3I CGTCTC 2 cut(s) 245, 933
FalI AAGNNNNNCTT 5 cut(s) 912, 944, 2217, 2249, 2750
FaqI GGGAC 1 cut(s) 271
FauNDI CATATG 1 cut(s) 2134
FbaI TGATCA 2 cut(s) 58, 324
FblI GTMKAC 3 cut(s) 945, 1650, 2490
FriOI GRGCYC 3 cut(s) 165, 448, 2724
GlaI GCGC 9 cut(s) 91, 204, 378, 436, 438, 720, 722, 973, 1760
GsaI CCCAGC 1 cut(s) 1374
HaeIII GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
HapII CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
HgaI GACGC 4 cut(s) 187, 342, 500, 2206
HhaI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Hin1I GRCGYC 2 cut(s) 5, 492
Hin6I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HinP1I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HincII GTYRAC 2 cut(s) 2514, 2563
HindII GTYRAC 2 cut(s) 2514, 2563
HindIII AAGCTT 2 cut(s) 413, 1217
HinfI GANTC 9 cut(s) 530, 593, 768, 991, 1021, 1552, 2267, 2421, 2590
HpaII CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
HphI GGTGA 5 cut(s) 1528, 1585, 1933, 2513, 2515
Hpy188III TCNNGA 3 cut(s) 62, 664, 680
HpyAV CCTTC 7 cut(s) 267, 400, 661, 734, 1018, 1487, 1557
HpyCH4III ACNGT 4 cut(s) 1098, 1987, 2659, 2675
HpyCH4IV ACGT 5 cut(s) 5, 290, 942, 1466, 1653
HpyF10VI GCNNNNNNNGC 9 cut(s) 87, 306, 443, 508, 799, 829, 978, 1199, 2707
HpyF3I CTNAG 7 cut(s) 458, 803, 1945, 1967, 2025, 2070, 2723
HpySE526I ACGT 5 cut(s) 5, 290, 942, 1466, 1653
Hsp92I GRCGYC 2 cut(s) 5, 492
HspAI GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 58, 324
LmnI GCTCC 6 cut(s) 276, 297, 499, 1199, 2198, 2698
Lsp1109I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
LweI GCATC 7 cut(s) 566, 706, 1972, 2494, 2653, 2670, 2697
MabI ACCWGGT 1 cut(s) 141
MaeII ACGT 5 cut(s) 5, 290, 942, 1466, 1653
MaeIII GTNAC 8 cut(s) 151, 291, 1253, 1388, 1498, 1553, 2383, 2726
MfeI CAATTG 2 cut(s) 914, 1350
MflI RGATCY 1 cut(s) 2227
MhlI GDGCHC 4 cut(s) 165, 448, 2143, 2724
MlsI TGGCCA 1 cut(s) 1529
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 6 cut(s) 539, 587, 1000, 1561, 2430, 2584
MmeI TCCRAC 4 cut(s) 384, 968, 1064, 1969
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 581
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 2 cut(s) 675, 1007
MscI TGGCCA 1 cut(s) 1529
MslI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320
Msp20I TGGCCA 1 cut(s) 1529
MspI CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
MspR9I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
MunI CAATTG 2 cut(s) 914, 1350
Mva1269I GAATGC 2 cut(s) 270, 300
MvaI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
MvnI CGCG 6 cut(s) 203, 353, 377, 437, 721, 1080
MwoI GCNNNNNNNGC 9 cut(s) 87, 306, 443, 508, 799, 829, 978, 1199, 2707
NaeI GCCGGC 1 cut(s) 12
NciI CCSGG 1 cut(s) 1824
NcoI CCATGG 3 cut(s) 1450, 1669, 2526
NdeI CATATG 1 cut(s) 2134
NgoMIV GCCGGC 1 cut(s) 10
NheI GCTAGC 1 cut(s) 1543
NlaIV GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 6 cut(s) 151, 291, 1388, 1498, 1553, 2726
NsiI ATGCAT 1 cut(s) 581
NspI RCATGY 2 cut(s) 1389, 1776
NspV TTCGAA 1 cut(s) 1561
OliI CACNNNNGTG 1 cut(s) 1051
PagI TCATGA 2 cut(s) 61, 679
PauI GCGCGC 2 cut(s) 435, 719
PciI ACATGT 1 cut(s) 1772
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 195, 338, 662, 1279, 1547
PctI GAATGC 2 cut(s) 270, 300
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 2 cut(s) 675, 1007
PfeI GAWTC 3 cut(s) 768, 1021, 2267
PflFI GACNNNGTC 2 cut(s) 19, 185
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 6 cut(s) 538, 587, 999, 1560, 2429, 2584
PpsI GAGTC 6 cut(s) 538, 587, 999, 1560, 2429, 2584
PscI ACATGT 1 cut(s) 1772
PshAI GACNNNNGTC 1 cut(s) 570
PshBI ATTAAT 1 cut(s) 1317
PsiI TTATAA 1 cut(s) 797
Psp124BI GAGCTC 3 cut(s) 165, 448, 2724
Psp6I CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
PspEI GGTNACC 1 cut(s) 2383
PspFI CCCAGC 1 cut(s) 1370
PspGI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
PspN4I GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
PspPI GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 1000, 1952
PsuI RGATCY 1 cut(s) 2227
PsyI GACNNNGTC 2 cut(s) 19, 185
PteI GCGCGC 2 cut(s) 435, 719
RsaI GTAC 6 cut(s) 1469, 1685, 1724, 1871, 2287, 2765
RsaNI GTAC 6 cut(s) 1468, 1684, 1723, 1870, 2286, 2764
RseI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320
SacI GAGCTC 3 cut(s) 165, 448, 2724
Sau96I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
ScaI AGTACT 1 cut(s) 2765
SchI GAGTC 6 cut(s) 539, 587, 1000, 1561, 2430, 2584
ScrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
SduI GDGCHC 4 cut(s) 165, 448, 2143, 2724
SexAI ACCWGGT 1 cut(s) 141
SfaNI GCATC 7 cut(s) 566, 706, 1972, 2494, 2653, 2670, 2697
SfcI CTRYAG 4 cut(s) 46, 955, 1203, 1344
SfuI TTCGAA 1 cut(s) 1561
SgrAI CRCCGGYG 2 cut(s) 10, 205
SinI GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
SmiMI CAYNNNNRTG 8 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320
SmlI CTYRAG 1 cut(s) 2717
SmoI CTYRAG 1 cut(s) 2717
SpeI ACTAGT 2 cut(s) 2060, 2282
SstI GAGCTC 3 cut(s) 165, 448, 2724
StyD4I CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2395
StyI CCWWGG 3 cut(s) 1450, 1669, 2526
TaaI ACNGT 4 cut(s) 1098, 1987, 2659, 2675
TaiI ACGT 5 cut(s) 8, 293, 945, 1469, 1656
TatI WGTACW 5 cut(s) 1683, 1722, 1869, 2285, 2763
TauI GCSGC 4 cut(s) 90, 309, 643, 646
TfiI GAWTC 3 cut(s) 768, 1021, 2267
TscAI CASTG 4 cut(s) 930, 1058, 1489, 1975
TseFI GTSAC 6 cut(s) 151, 291, 1388, 1498, 1553, 2726
TseI GCWGC 7 cut(s) 97, 195, 1157, 1202, 1547, 2103, 2298
Tsp45I GTSAC 6 cut(s) 151, 291, 1388, 1498, 1553, 2726
TspDTI ATGAA 8 cut(s) 454, 668, 849, 1285, 1964, 2028, 2042, 2445
TspGWI ACGGA 3 cut(s) 310, 436, 561
TspRI CASTG 4 cut(s) 930, 1058, 1489, 1975
Tth111I GACNNNGTC 2 cut(s) 19, 185
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
VspI ATTAAT 1 cut(s) 1317
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 8 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506, 2750
XceI RCATGY 2 cut(s) 1389, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 2552
XmiI GTMKAC 3 cut(s) 945, 1650, 2490
XmnI GAANNNNTTC 2 cut(s) 675, 1007
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 2765
Zsp2I ATGCAT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.