Rh2DG103700

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003315
Physical Location & Seq
Reverse (-)
8421537 .. 8427062
5526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG103700.1

Sequence Viewer

Length: 2700 bp
ATGACGTCGCCGGCGACCCCGTCGTTTGGTTCCAAGCGATCAAACTACAGCTTACCTGATCATGATCGTCAGCACCACCGCCTTTGCGGCGCAATGCTGCCTATATTTCTCAACGACCTCACTAATCACAACAACCAAGACCTGGTTGAGGTCACACTAGAGCTCAACAACGACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGGGAACGACACGCAGGAGGAGGAGGAGGAGGAGGAAGAGGAGACGGGGACAGGAATGCTAGGAAGGAGCCTCTCCGCTACGTCACGGAGCATTCGCCGCACATTCGGGTGGCTGATCAGATCGTCGTCGTCGAGGACCACCGCGTCTTCCAACTCCGGCGAACTCGCGCTTCCGCCACGAGAGGCGAGGAGGCTGAAGGCGAAGCTTCAACGGACAAGATCGAGCGCGCAAAGAGCTCTCAACGGCCTGAGGTTCATCAGCAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTGGAGGCCAGGTTCGAGTCGCTGGCCGTCCACGGATTGCTCGCCAGAGGAGACTTTGGTCGATGCATAGGGATGGAGGACTCGGAGGAGTTTGCGGTGGGGATATTTGACACATTGGCGAGGAGGCGGCGGCAGAAAATTACGAAGATCACGAAGGAAGAACTTCATGATTTTTGGATACAAATCTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATCACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCAGCAAACAAGCTATCAAAGCTGAAAGAACAAGCTGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCCGAAAATTTTGGTTATATTGAGTTATGGCAATTGGAAGCACTGCTTTTACAAAGAGACGTATACATAAACTACAGCAGACCATTGAGCGCAGTAAGCGTAGGTTGGAGTCAGAACCTGAATTCCTTCAGGCCCAAGAATCTGCTTCGGAGACTAAATCGTTCACTTCAGTGTCTCATACTAGACAATTTGCAACGCGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCACTTTTTGCCTGGAAATTCTACCAATACAGAAACAAAGCAGCATTTGAAGTCATCGGCTATTGCTTGCCAGTAGCCAAAGGAGCTGCAGAAACTTTGAAGCTTAACATGGCCCTCATCCTTTTACCTGTTTGTCGTAACACATTGACATGGCTTCGATCAACACGAGCTAGGTTCTTCATTCCCTTTGATGACAACATTAATTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCACGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAACTCATCTGCGGAAGAATTTGAGCCAATATCCTCTGATTTCCATGGCAAAAACCCGACGTACAAATTCTTATTCACTGGACCAGAAGGCGTGACTGGAATTCTGATGGTGATTTTTATGGCCATCTCATTCACGCTAGCAGCGAGTCACTTTCGAAGGAACATGGTGAGGCTTCCTGCCCCCTTGAACAAACTGACTGGGTTTAATGCGTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCATGGAAGCTGTTTGTACTTTGTCCACAAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATTCAGTTAAGATACTAAAGGCTACAATCTTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGTGGACAATACATATTTCTACAATGCCCAACAATCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCAGCACCTGGGGATGAGCATCTCAGTGTTCATATCCGAACAGTTGGAGACTGGACACAAGAATTGAAGCGAGCCATTTCTGAGGGAGATCATTCATTATCTTTAGTTCATCGGACTAGTGTTGCTCAGCCACAAGATATGGATCAAATAAGATTATGCAGCCAACCCAAATTGTTTTTTGATGGTCCATATGGGGCACCGGCACAGGACTACCGCAACTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACCCCTTTTGTAAGCGTCCTTAAAGATCTTCTTAACAGCACAAGAACAGCAGAAGAACAACTGGATTCAAATACAGAAACTAGTACACCATCAGGCAGCCTAAATAGTTTTACATCATCGTGTTTGACACCCAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAAGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACAAGTGTCTACGAAGAGGGTGATGCAAGGTCAACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGAGTTGACATCCTATCTGGCACCAGAGTGCAATCAATCATCTCTGATCTTCTTGAGAAGCTTGTTAGCCCAGCGTTTAACGCGTCGCTTCAGGGTATAGCCAACAATGATCCCAGCAACAAAGGCAATTGCACAGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

899

Amino Acids

101.57

Weight (kDa)

6.62

Isoelectric Point (pI)

51.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 138 - 240 7.7e-39 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 408 - 554 2.5e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 597 - 716 1e-30 FAD-binding domain
NAD_binding_6 PF08030 722 - 864 1e-29 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
AasI GACNNNNNNGTC 1 cut(s) 352
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 1926, 2140, 2576
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 3 cut(s) 945, 1650, 2490
AccII CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
AclWI GGATC 3 cut(s) 2094, 2454, 2660
AcoI YGGCCR 2 cut(s) 537, 1527
AcsI RAATTY 7 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506
AcuI CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2630
AcyI GRCGYC 2 cut(s) 5, 492
AfaI GTAC 5 cut(s) 1469, 1685, 1724, 1871, 2287
AfiI CCNNNNNNNGG 3 cut(s) 26, 142, 148
AflIII ACRYGT 2 cut(s) 1772, 2637
AgsI TTSAA 9 cut(s) 419, 728, 1166, 1216, 1594, 1922, 2011, 2271, 2465
AhlI ACTAGT 2 cut(s) 2060, 2282
AjnI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
AleI CACNNNNGTG 2 cut(s) 1051, 2582
AloI GAACNNNNNNTCC 6 cut(s) 509, 541, 989, 1021, 1347, 1379
Alw21I GWGCWC 2 cut(s) 165, 448
Alw26I GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
AlwI GGATC 3 cut(s) 2094, 2454, 2660
AlwNI CAGNNNCTG 2 cut(s) 1000, 1952
AoxI GGCC 6 cut(s) 454, 519, 537, 1013, 1227, 1527
ApeKI GCWGC 7 cut(s) 97, 195, 1157, 1202, 1547, 2103, 2298
ApoI RAATTY 7 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
AseI ATTAAT 1 cut(s) 1317
Asp700I GAANNNNTTC 2 cut(s) 675, 1007
AspLEI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
AspS9I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
AsuC2I CCSGG 1 cut(s) 1824
AsuHPI GGTGA 5 cut(s) 1528, 1585, 1933, 2513, 2515
AsuII TTCGAA 1 cut(s) 1561
AsuNHI GCTAGC 1 cut(s) 1543
AvaII GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
AxyI CCTNAGG 1 cut(s) 458
BaeGI GKGCMC 1 cut(s) 2143
BalI TGGCCA 1 cut(s) 1529
BanI GGYRCC 3 cut(s) 1926, 2140, 2576
BanII GRGCYC 2 cut(s) 165, 448
BauI CACGAG 2 cut(s) 387, 1281
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 2 cut(s) 165, 448
BbvCI CCTCAGC 1 cut(s) 1945
BbvI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BccI CCATC 7 cut(s) 580, 755, 1507, 1538, 1946, 2120, 2299
BceAI ACGGC 2 cut(s) 469, 524
BciT130I CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BciVI GTATCC 2 cut(s) 684, 1775
BclI TGATCA 2 cut(s) 58, 324
BcnI CCSGG 1 cut(s) 1824
BcoDI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BcuI ACTAGT 2 cut(s) 2060, 2282
BfmI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BfuI GTATCC 2 cut(s) 684, 1775
BglI GCCNNNNNGGC 1 cut(s) 87
BglII AGATCT 1 cut(s) 2227
BlpI GCTNAGC 1 cut(s) 2070
Bme1390I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
Bme18I GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
BmgT120I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
BmiI GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
BmrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
BmrI ACTGGG 1 cut(s) 1614
BmsI GCATC 4 cut(s) 566, 706, 1972, 2494
BmtI GCTAGC 1 cut(s) 1547
BmuI ACTGGG 1 cut(s) 1614
BoxI GACNNNNGTC 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 348
Bpu10I CCTNAGC 1 cut(s) 1945
Bpu1102I GCTNAGC 1 cut(s) 2070
Bpu14I TTCGAA 1 cut(s) 1561
BpuEI CTTGAG 1 cut(s) 2630
BpuMI CCSGG 1 cut(s) 1824
BsaBI GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BsaHI GRCGYC 2 cut(s) 5, 492
BsaJI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 142, 148
Bse118I RCCGGY 3 cut(s) 10, 205, 2143
Bse1I ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
Bse21I CCTNAGG 1 cut(s) 458
Bse3DI GCAATG 3 cut(s) 99, 760, 1116
Bse8I GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BseBI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BseDI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BseGI GGATG 8 cut(s) 591, 766, 1233, 1665, 1725, 1963, 2434, 2565
BseJI GATNNNNATC 5 cut(s) 63, 695, 1724, 1962, 2085
BseLI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BseMI GCAATG 3 cut(s) 99, 760, 1116
BseMII CTCAG 6 cut(s) 449, 794, 1959, 1981, 2016, 2084
BseNI ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
BsePI GCGCGC 2 cut(s) 435, 719
BseSI GKGCMC 1 cut(s) 2143
BseXI GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BseYI CCCAGC 3 cut(s) 1370, 2626, 2669
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
BshFI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BshNI GGYRCC 3 cut(s) 1926, 2140, 2576
BsiHKAI GWGCWC 2 cut(s) 165, 448
BsiSI CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BsmAI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BsmBI CGTCTC 2 cut(s) 245, 933
BsmFI GGGAC 1 cut(s) 271
BsmI GAATGC 2 cut(s) 270, 300
BsnI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
Bsp119I TTCGAA 1 cut(s) 1561
Bsp1286I GDGCHC 3 cut(s) 165, 448, 2143
Bsp1407I TGTACA 1 cut(s) 1722
Bsp1720I GCTNAGC 1 cut(s) 2070
Bsp19I CCATGG 3 cut(s) 1450, 1669, 2526
BspANI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BspCNI CTCAG 6 cut(s) 450, 795, 1958, 1980, 2017, 2083
BspFNI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
BspHI TCATGA 2 cut(s) 61, 679
BspLI GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
BspMAI CTGCAG 1 cut(s) 1207
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 3 cut(s) 2094, 2454, 2660
BspT104I TTCGAA 1 cut(s) 1561
BspT107I GGYRCC 3 cut(s) 1926, 2140, 2576
BsrDI GCAATG 3 cut(s) 99, 760, 1116
BsrFI RCCGGY 3 cut(s) 10, 205, 2143
BsrGI TGTACA 1 cut(s) 1722
BsrI ACTGG 6 cut(s) 1187, 1489, 1507, 1609, 2000, 2268
BssAI RCCGGY 3 cut(s) 10, 205, 2143
BssECI CCNNGG 6 cut(s) 495, 544, 1450, 1669, 1952, 2526
BssHII GCGCGC 2 cut(s) 435, 719
BssNAI GTATAC 1 cut(s) 946
BssNI GRCGYC 2 cut(s) 5, 492
BssSI CACGAG 2 cut(s) 387, 1281
BssT1I CCWWGG 3 cut(s) 1450, 1669, 2526
Bst1107I GTATAC 1 cut(s) 946
Bst2BI CACGAG 2 cut(s) 387, 1281
Bst2UI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
Bst4CI ACNGT 2 cut(s) 1098, 1987
Bst6I CTCTTC 2 cut(s) 240, 2490
BstACI GRCGYC 2 cut(s) 5, 492
BstAUI TGTACA 1 cut(s) 1722
BstBI TTCGAA 1 cut(s) 1561
BstC8I GCNNGC 8 cut(s) 12, 437, 537, 555, 721, 1184, 1545, 2016
BstDEI CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2070
BstDSI CCRYGG 4 cut(s) 544, 1450, 1669, 2526
BstEII GGTNACC 1 cut(s) 2383
BstENI CCTNNNNNAGG 1 cut(s) 146
BstF5I GGATG 8 cut(s) 591, 766, 1233, 1665, 1725, 1963, 2434, 2565
BstFNI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
BstHHI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
BstMAI GTCTC 6 cut(s) 245, 558, 933, 1027, 1061, 1986
BstNI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
BstNSI RCATGY 2 cut(s) 1389, 1776
BstPAI GACNNNNGTC 1 cut(s) 570
BstPI GGTNACC 1 cut(s) 2383
BstSCI CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2395
BstSFI CTRYAG 4 cut(s) 46, 955, 1203, 1344
BstSLI GKGCMC 1 cut(s) 2143
BstUI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
BstV1I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 2227
BstXI CCANNNNNNTGG 1 cut(s) 1923
BstYI RGATCY 1 cut(s) 2227
BstZ17I GTATAC 1 cut(s) 946
Bsu36I CCTNAGG 1 cut(s) 458
BsuI GTATCC 2 cut(s) 684, 1775
BsuRI GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
BtgI CCRYGG 4 cut(s) 544, 1450, 1669, 2526
BtsCI GGATG 8 cut(s) 591, 766, 1233, 1665, 1725, 1963, 2434, 2565
BtsI GCAGTG 1 cut(s) 923
BtsIMutI CAGTG 4 cut(s) 923, 1058, 1482, 1975
Cac8I GCNNGC 8 cut(s) 12, 437, 537, 555, 721, 1184, 1545, 2016
CaiI CAGNNNCTG 2 cut(s) 1000, 1952
CciI TCATGA 2 cut(s) 61, 679
CfoI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Cfr10I RCCGGY 3 cut(s) 10, 205, 2143
Cfr13I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
CseI GACGC 5 cut(s) 187, 342, 500, 2206, 2628
CsiI ACCWGGT 1 cut(s) 141
Csp6I GTAC 5 cut(s) 1468, 1684, 1723, 1870, 2286
CspCI CAANNNNNGTGG 2 cut(s) 65, 100
CviQI GTAC 5 cut(s) 1468, 1684, 1723, 1870, 2286
DdeI CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2070
DraI TTTAAA 1 cut(s) 2416
DrdI GACNNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 2 cut(s) 537, 1527
Eam1104I CTCTTC 2 cut(s) 240, 2490
EarI CTCTTC 2 cut(s) 240, 2490
EciI GGCGGA 1 cut(s) 372
Ecl136II GAGCTC 2 cut(s) 163, 446
Eco130I CCWWGG 3 cut(s) 1450, 1669, 2526
Eco24I GRGCYC 2 cut(s) 165, 448
Eco47I GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
Eco53kI GAGCTC 2 cut(s) 163, 446
Eco57I CTGAAG 6 cut(s) 425, 795, 867, 994, 1034, 2630
Eco81I CCTNAGG 1 cut(s) 458
Eco91I GGTNACC 1 cut(s) 2383
EcoICRI GAGCTC 2 cut(s) 163, 446
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoO65I GGTNACC 1 cut(s) 2383
EcoRI GAATTC 2 cut(s) 1003, 1506
EcoRII CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
EcoT14I CCWWGG 3 cut(s) 1450, 1669, 2526
EcoT22I ATGCAT 1 cut(s) 581
EcoT38I GRGCYC 2 cut(s) 165, 448
ErhI CCWWGG 3 cut(s) 1450, 1669, 2526
Esp3I CGTCTC 2 cut(s) 245, 933
FalI AAGNNNNNCTT 4 cut(s) 912, 944, 2217, 2249
FaqI GGGAC 1 cut(s) 271
FauNDI CATATG 1 cut(s) 2134
FbaI TGATCA 2 cut(s) 58, 324
FblI GTMKAC 3 cut(s) 945, 1650, 2490
FokI GGATG 8 cut(s) 598, 773, 1220, 1652, 1732, 1970, 2441, 2552
FriOI GRGCYC 2 cut(s) 165, 448
GlaI GCGC 9 cut(s) 91, 204, 378, 436, 438, 720, 722, 973, 1760
GsaI CCCAGC 3 cut(s) 1374, 2630, 2673
HaeIII GGCC 6 cut(s) 456, 521, 539, 1015, 1229, 1529
HapII CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
HgaI GACGC 5 cut(s) 187, 342, 500, 2206, 2628
HhaI GCGC 9 cut(s) 92, 205, 379, 437, 439, 721, 723, 974, 1761
Hin1I GRCGYC 2 cut(s) 5, 492
Hin6I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HinP1I GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
HincII GTYRAC 2 cut(s) 2514, 2563
HindII GTYRAC 2 cut(s) 2514, 2563
HindIII AAGCTT 3 cut(s) 413, 1217, 2615
HinfI GANTC 8 cut(s) 530, 593, 768, 991, 1021, 1552, 2267, 2421
HpaII CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
HphI GGTGA 5 cut(s) 1528, 1585, 1933, 2513, 2515
Hpy188III TCNNGA 4 cut(s) 62, 664, 680, 2609
HpyAV CCTTC 7 cut(s) 267, 400, 661, 734, 1018, 1487, 1557
HpyCH4III ACNGT 2 cut(s) 1098, 1987
HpyCH4IV ACGT 5 cut(s) 5, 290, 942, 1466, 1653
HpyF3I CTNAG 6 cut(s) 458, 803, 1945, 1967, 2025, 2070
HpySE526I ACGT 5 cut(s) 5, 290, 942, 1466, 1653
Hsp92I GRCGYC 2 cut(s) 5, 492
HspAI GCGC 9 cut(s) 90, 203, 377, 435, 437, 719, 721, 972, 1759
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 58, 324
LmnI GCTCC 5 cut(s) 276, 297, 499, 1199, 2198
Lsp1109I GCAGC 7 cut(s) 84, 207, 1169, 1189, 1559, 2115, 2310
LweI GCATC 4 cut(s) 566, 706, 1972, 2494
MabI ACCWGGT 1 cut(s) 141
MaeII ACGT 5 cut(s) 5, 290, 942, 1466, 1653
MaeIII GTNAC 7 cut(s) 151, 291, 1253, 1388, 1498, 1553, 2383
MfeI CAATTG 3 cut(s) 914, 1350, 2683
MflI RGATCY 1 cut(s) 2227
MhlI GDGCHC 3 cut(s) 165, 448, 2143
MlsI TGGCCA 1 cut(s) 1529
MluI ACGCGT 1 cut(s) 2637
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 5 cut(s) 539, 587, 1000, 1561, 2430
MmeI TCCRAC 4 cut(s) 384, 968, 1064, 1969
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 581
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 2 cut(s) 675, 1007
MscI TGGCCA 1 cut(s) 1529
MslI CAYNNNNRTG 9 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320, 2582
Msp20I TGGCCA 1 cut(s) 1529
MspI CCGG 6 cut(s) 11, 206, 366, 480, 1824, 2144
MspR9I CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
MunI CAATTG 3 cut(s) 914, 1350, 2683
Mva1269I GAATGC 2 cut(s) 270, 300
MvaI CCWGG 6 cut(s) 143, 523, 1129, 1860, 1953, 2397
MvnI CGCG 7 cut(s) 203, 353, 377, 437, 721, 1080, 2639
NaeI GCCGGC 1 cut(s) 12
NciI CCSGG 1 cut(s) 1824
NcoI CCATGG 3 cut(s) 1450, 1669, 2526
NdeI CATATG 1 cut(s) 2134
NgoMIV GCCGGC 1 cut(s) 10
NheI GCTAGC 1 cut(s) 1543
NlaIV GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 5 cut(s) 151, 291, 1388, 1498, 1553
NsiI ATGCAT 1 cut(s) 581
NspI RCATGY 2 cut(s) 1389, 1776
NspV TTCGAA 1 cut(s) 1561
OliI CACNNNNGTG 2 cut(s) 1051, 2582
PagI TCATGA 2 cut(s) 61, 679
PauI GCGCGC 2 cut(s) 435, 719
PciI ACATGT 1 cut(s) 1772
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 195, 338, 662, 1279, 1547
PctI GAATGC 2 cut(s) 270, 300
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 2 cut(s) 675, 1007
PfeI GAWTC 3 cut(s) 768, 1021, 2267
PflFI GACNNNGTC 2 cut(s) 19, 185
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 5 cut(s) 538, 587, 999, 1560, 2429
PpsI GAGTC 5 cut(s) 538, 587, 999, 1560, 2429
PscI ACATGT 1 cut(s) 1772
PshAI GACNNNNGTC 1 cut(s) 570
PshBI ATTAAT 1 cut(s) 1317
PsiI TTATAA 1 cut(s) 797
Psp124BI GAGCTC 2 cut(s) 165, 448
Psp6I CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
PspEI GGTNACC 1 cut(s) 2383
PspFI CCCAGC 3 cut(s) 1370, 2626, 2669
PspGI CCWGG 6 cut(s) 141, 521, 1127, 1858, 1951, 2395
PspN4I GGNNCC 6 cut(s) 31, 278, 1376, 1928, 2142, 2578
PspPI GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 1000, 1952
PsuI RGATCY 1 cut(s) 2227
PsyI GACNNNGTC 2 cut(s) 19, 185
PteI GCGCGC 2 cut(s) 435, 719
RsaI GTAC 5 cut(s) 1469, 1685, 1724, 1871, 2287
RsaNI GTAC 5 cut(s) 1468, 1684, 1723, 1870, 2286
RseI CAYNNNNRTG 9 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320, 2582
SacI GAGCTC 2 cut(s) 165, 448
Sau96I GGNCC 8 cut(s) 345, 482, 703, 1014, 1228, 1487, 2129, 2530
SchI GAGTC 5 cut(s) 539, 587, 1000, 1561, 2430
ScrFI CCNGG 7 cut(s) 143, 523, 1129, 1824, 1860, 1953, 2397
SduI GDGCHC 3 cut(s) 165, 448, 2143
SexAI ACCWGGT 1 cut(s) 141
SfaNI GCATC 4 cut(s) 566, 706, 1972, 2494
SfcI CTRYAG 4 cut(s) 46, 955, 1203, 1344
SfuI TTCGAA 1 cut(s) 1561
SgrAI CRCCGGYG 2 cut(s) 10, 205
SinI GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
SmiMI CAYNNNNRTG 9 cut(s) 188, 316, 584, 1051, 1264, 1921, 1968, 2320, 2582
SmlI CTYRAG 1 cut(s) 2609
SmoI CTYRAG 1 cut(s) 2609
SpeI ACTAGT 2 cut(s) 2060, 2282
SstI GAGCTC 2 cut(s) 165, 448
StyD4I CCNGG 7 cut(s) 141, 521, 1127, 1822, 1858, 1951, 2395
StyI CCWWGG 3 cut(s) 1450, 1669, 2526
TaaI ACNGT 2 cut(s) 1098, 1987
TaiI ACGT 5 cut(s) 8, 293, 945, 1469, 1656
TaqI TCGA 8 cut(s) 341, 431, 528, 574, 738, 1273, 1561, 2406
TatI WGTACW 4 cut(s) 1683, 1722, 1869, 2285
TauI GCSGC 4 cut(s) 90, 309, 643, 646
TfiI GAWTC 3 cut(s) 768, 1021, 2267
TscAI CASTG 4 cut(s) 930, 1058, 1489, 1975
TseFI GTSAC 5 cut(s) 151, 291, 1388, 1498, 1553
TseI GCWGC 7 cut(s) 97, 195, 1157, 1202, 1547, 2103, 2298
Tsp45I GTSAC 5 cut(s) 151, 291, 1388, 1498, 1553
TspDTI ATGAA 8 cut(s) 454, 668, 849, 1285, 1964, 2028, 2042, 2445
TspGWI ACGGA 3 cut(s) 310, 436, 561
TspRI CASTG 4 cut(s) 930, 1058, 1489, 1975
Tth111I GACNNNGTC 2 cut(s) 19, 185
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 6 cut(s) 345, 482, 703, 1487, 2129, 2530
VspI ATTAAT 1 cut(s) 1317
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 7 cut(s) 729, 889, 1003, 1133, 1424, 1472, 1506
XceI RCATGY 2 cut(s) 1389, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 2552
XmiI GTMKAC 3 cut(s) 945, 1650, 2490
XmnI GAANNNNTTC 2 cut(s) 675, 1007
ZraI GACGTC 1 cut(s) 6
Zsp2I ATGCAT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.