Rh2CG106000

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0003315
Physical Location & Seq
Reverse (-)
9148260 .. 9152836
4577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG106000.1

Sequence Viewer

Length: 2700 bp
ATGACGTCGCCGGCGACCCCGTCGTTTGGTTCCAAGCGATCAAACTACAGCTTACCTGATCATGATCGTCAGCACCACCGCCTTTGCGGCGCAATGCTGCCTATATTTCTCAACGACCTCACTAATCACAACAACCAAGACCTGGTTGAGGTCACACTAGAGCTCAACAACGACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGGGAACGACACGCCGGAGGAGGAGGACGAGGAAGAGGAGACAGGGACAGGAATGCTAGGAAGGAGCCTCTCCGCTACGTCACGGAGCATTCGCCGCACATTCGGGTGGCTGATCAGATCGTCGTCGTCGAGGACCGCCGCGTCTTCCAACTCCGGCGAACTCGCGCTTCCGCCACGAGAGGCGAGGAGGCTGAAGGCGAAGCTTCAACGGACAAGATCGAGCGCGCAAAGAGCTCTCAACGGCCTGAGGTTCATCAGCAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTGGAGGCCAGGTTCGAGTCGCTGGCCGTCCACGGATTGCTCGCCAGAGGAGACTTTGGTCGATGCATAGGGATGGCGGACTCGGAGGAGTTTGCGGTGGGGATATTTGACACATTGGCGAGGAGGCGGCGGCAGAAAATTACGAAGATCACGAAGGAAGAACTTCATGATTTTTGGATACAAATCTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATCACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCAGCAAACAAGCTATCAAAGCTGAAAGAACAAGCTGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCCGAAAATTTTGGTTATATTGAGTTATGGCAATTGGAAGCACTGCTTTTACAAAGAGACGTATACATAAACTACAGCAGACCATTGAGCGCAGTAAGTGTAGGTTGGAGTCAGAACCTGAATTCCTTCAGGCCCAAGAATCTGCTTCGGAGACTAAATCGTTCACTTCAGTGTCTCATACTAGACAATTTGCAACGCGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCACTTTTTGCCTGGAAATTCTACCAATACAGAAACAAAGCAGCATTTAAAGTCATCGGCTATTGCTTGCCAGTAGCCAAAGGAGCTGCAGAAACTTTGAAGCTTAACATGGCCCTCATCCTTTTACCTGTTTGTCGTAACACATTGACATGGCTTCGATCAACACGAGCTAGGTTCTTCATTCCCTTTGATGACAACATTAATTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCATGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAACTCATCTGCGGAAGAATTTGAGCCAATATCCTCTGATTTCCATGGCAAAAACCCAACATACAAATTCTTATTCACTGGACCAGAAGGCTTGACTGGAATTCTGATGGTGATTTTTATGGCCATCTCATTCACGCTAGCAGCGAGTCACTTTCGAAGGAACATGGTGAGGCTTCCTGCCCCCTTGAACAAACTGACTGGGTTTAATGCGTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCATGGAAGCTGTTTGTACTTTGTCCACGAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATTCAGTTAAGATACTAAAGGCTACAATCTTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGTGGACAATACATATTTCTACAATGCCCAACAATCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCAGCACCTGGGGATGAGCATCTCAGTGTTCATATCCGAACAGTTGGAGACTGGACGCAAGAATTGAAGCGAGCCATTTCTGAGGGAGATCATTCATTATCTTTAGTTCATCGGACTAGTGTTGCTCAGCCACAAGATATGGATCAAATAAGACTATGCAGCCAACCCAAATTGTTTTTTGATGGTCCATATGGGGCACCGGCACAGGACTACCGCAACTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACCCCTTTTGTAAGCGTCCTTAAAGATCTTCTTAACAGCACAAGAACAGCAGAAGAACAACTGGATTCAAATACAGAAACTAGTACACCATCAGGCAGCCTAAATAGTTTTACATCATCGTGTTTGACACCCAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAAGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACGAGTGTCTACGAAGAGGGTGATGCAAGGTCAACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGAGTTGACATCCTATCTGGCACCAGAGTAATGACTCATTTTGCAAGACCTAATTGGAAAGAAGTGTTTACCAAGATAGCTTCCAAGCATCCATTTTCGACAGTAGGTAAAGATAAGCTACCAGAAGTCCAGAACTATACACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

899

Amino Acids

101.91

Weight (kDa)

8.12

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 137 - 239 1.3e-38 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 407 - 553 1.7e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 596 - 715 1e-30 FAD-binding domain
NAD_binding_6 PF08030 721 - 887 9.5e-40 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AasI GACNNNNNNGTC 1 cut(s) 349
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 1923, 2137, 2573
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 3 cut(s) 942, 1647, 2487
AccII CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
AclWI GGATC 2 cut(s) 2091, 2451
AcoI YGGCCR 2 cut(s) 534, 1524
AcsI RAATTY 7 cut(s) 726, 886, 1000, 1130, 1421, 1469, 1503
AcuI CTGAAG 5 cut(s) 422, 792, 864, 991, 1031
AcyI GRCGYC 2 cut(s) 5, 489
AfaI GTAC 4 cut(s) 1682, 1721, 1868, 2284
AfiI CCNNNNNNNGG 3 cut(s) 26, 142, 148
AflIII ACRYGT 2 cut(s) 1769, 2693
AgsI TTSAA 8 cut(s) 416, 725, 1213, 1591, 1919, 2008, 2268, 2462
AhlI ACTAGT 2 cut(s) 2057, 2279
AjnI CCWGG 6 cut(s) 141, 518, 1124, 1855, 1948, 2392
AleI CACNNNNGTG 1 cut(s) 1048
AloI GAACNNNNNNTCC 6 cut(s) 506, 538, 986, 1018, 1344, 1376
Alw21I GWGCWC 2 cut(s) 165, 445
Alw26I GTCTC 6 cut(s) 242, 555, 930, 1024, 1058, 1983
AlwI GGATC 2 cut(s) 2091, 2451
AlwNI CAGNNNCTG 2 cut(s) 997, 1949
AoxI GGCC 6 cut(s) 451, 516, 534, 1010, 1224, 1524
ApeKI GCWGC 7 cut(s) 97, 195, 1154, 1199, 1544, 2100, 2295
ApoI RAATTY 7 cut(s) 726, 886, 1000, 1130, 1421, 1469, 1503
ArsI GACNNNNNNTTYG 2 cut(s) 692, 724
AseI ATTAAT 1 cut(s) 1314
Asp700I GAANNNNTTC 2 cut(s) 672, 1004
AspLEI GCGC 9 cut(s) 92, 205, 376, 434, 436, 718, 720, 971, 1758
AspS9I GGNCC 8 cut(s) 342, 479, 700, 1011, 1225, 1484, 2126, 2527
AsuC2I CCSGG 1 cut(s) 1821
AsuHPI GGTGA 5 cut(s) 1525, 1582, 1930, 2510, 2512
AsuII TTCGAA 1 cut(s) 1558
AsuNHI GCTAGC 1 cut(s) 1540
AvaII GGWCC 6 cut(s) 342, 479, 700, 1484, 2126, 2527
AxyI CCTNAGG 1 cut(s) 455
BaeGI GKGCMC 1 cut(s) 2140
BalI TGGCCA 1 cut(s) 1526
BanI GGYRCC 3 cut(s) 1923, 2137, 2573
BanII GRGCYC 2 cut(s) 165, 445
BauI CACGAG 3 cut(s) 384, 1278, 1691
BbsI GAAGAC 1 cut(s) 345
Bbv12I GWGCWC 2 cut(s) 165, 445
BbvCI CCTCAGC 1 cut(s) 1942
BbvI GCAGC 7 cut(s) 84, 207, 1166, 1186, 1556, 2112, 2307
BccI CCATC 7 cut(s) 577, 752, 1504, 1535, 1943, 2117, 2296
BceAI ACGGC 2 cut(s) 466, 521
BciT130I CCWGG 6 cut(s) 143, 520, 1126, 1857, 1950, 2394
BciVI GTATCC 2 cut(s) 681, 1772
BclI TGATCA 2 cut(s) 58, 321
BcnI CCSGG 1 cut(s) 1821
BcoDI GTCTC 6 cut(s) 242, 555, 930, 1024, 1058, 1983
BcuI ACTAGT 2 cut(s) 2057, 2279
BfmI CTRYAG 4 cut(s) 46, 952, 1200, 1341
BfuI GTATCC 2 cut(s) 681, 1772
BglI GCCNNNNNGGC 1 cut(s) 87
BglII AGATCT 1 cut(s) 2224
BlpI GCTNAGC 1 cut(s) 2067
Bme1390I CCNGG 7 cut(s) 143, 520, 1126, 1821, 1857, 1950, 2394
Bme18I GGWCC 6 cut(s) 342, 479, 700, 1484, 2126, 2527
BmgT120I GGNCC 8 cut(s) 342, 479, 700, 1011, 1225, 1484, 2126, 2527
BmiI GGNNCC 6 cut(s) 31, 275, 1373, 1925, 2139, 2575
BmrFI CCNGG 7 cut(s) 143, 520, 1126, 1821, 1857, 1950, 2394
BmrI ACTGGG 1 cut(s) 1611
BmsI GCATC 5 cut(s) 563, 703, 1969, 2491, 2650
BmtI GCTAGC 1 cut(s) 1544
BmuI ACTGGG 1 cut(s) 1611
BoxI GACNNNNGTC 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 345
Bpu10I CCTNAGC 1 cut(s) 1942
Bpu1102I GCTNAGC 1 cut(s) 2067
Bpu14I TTCGAA 1 cut(s) 1558
BpuMI CCSGG 1 cut(s) 1821
BsaBI GATNNNNATC 5 cut(s) 63, 692, 1721, 1959, 2082
BsaHI GRCGYC 2 cut(s) 5, 489
BsaJI CCNNGG 6 cut(s) 492, 541, 1447, 1666, 1949, 2523
BsaWI WCCGGW 1 cut(s) 476
BsaXI ACNNNNNCTCC 2 cut(s) 506, 536
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 142, 148
Bse118I RCCGGY 3 cut(s) 10, 205, 2140
Bse1I ACTGG 6 cut(s) 1184, 1486, 1504, 1606, 1997, 2265
Bse21I CCTNAGG 1 cut(s) 455
Bse3DI GCAATG 3 cut(s) 99, 757, 1113
Bse8I GATNNNNATC 5 cut(s) 63, 692, 1721, 1959, 2082
BseBI CCWGG 6 cut(s) 143, 520, 1126, 1857, 1950, 2394
BseDI CCNNGG 6 cut(s) 492, 541, 1447, 1666, 1949, 2523
BseGI GGATG 9 cut(s) 588, 763, 1230, 1662, 1722, 1960, 2431, 2562, 2641
BseJI GATNNNNATC 5 cut(s) 63, 692, 1721, 1959, 2082
BseLI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BseMI GCAATG 3 cut(s) 99, 757, 1113
BseMII CTCAG 6 cut(s) 446, 791, 1956, 1978, 2013, 2081
BseNI ACTGG 6 cut(s) 1184, 1486, 1504, 1606, 1997, 2265
BsePI GCGCGC 2 cut(s) 432, 716
BseRI GAGGAG 8 cut(s) 242, 245, 260, 409, 509, 573, 611, 646
BseSI GKGCMC 1 cut(s) 2140
BseXI GCAGC 7 cut(s) 84, 207, 1166, 1186, 1556, 2112, 2307
BseYI CCCAGC 1 cut(s) 1367
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
BshFI GGCC 6 cut(s) 453, 518, 536, 1012, 1226, 1526
BshNI GGYRCC 3 cut(s) 1923, 2137, 2573
BsiHKAI GWGCWC 2 cut(s) 165, 445
BsiSI CCGG 7 cut(s) 11, 206, 224, 363, 477, 1821, 2141
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BsmAI GTCTC 6 cut(s) 242, 555, 930, 1024, 1058, 1983
BsmBI CGTCTC 1 cut(s) 930
BsmFI GGGAC 1 cut(s) 268
BsmI GAATGC 2 cut(s) 267, 297
BsnI GGCC 6 cut(s) 453, 518, 536, 1012, 1226, 1526
Bsp119I TTCGAA 1 cut(s) 1558
Bsp1286I GDGCHC 3 cut(s) 165, 445, 2140
Bsp1407I TGTACA 1 cut(s) 1719
Bsp1720I GCTNAGC 1 cut(s) 2067
Bsp19I CCATGG 3 cut(s) 1447, 1666, 2523
BspANI GGCC 6 cut(s) 453, 518, 536, 1012, 1226, 1526
BspCNI CTCAG 6 cut(s) 447, 792, 1955, 1977, 2014, 2080
BspFNI CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
BspHI TCATGA 2 cut(s) 61, 676
BspLI GGNNCC 6 cut(s) 31, 275, 1373, 1925, 2139, 2575
BspMAI CTGCAG 1 cut(s) 1204
BspOI GCTAGC 1 cut(s) 1544
BspPI GGATC 2 cut(s) 2091, 2451
BspT104I TTCGAA 1 cut(s) 1558
BspT107I GGYRCC 3 cut(s) 1923, 2137, 2573
BsrDI GCAATG 3 cut(s) 99, 757, 1113
BsrFI RCCGGY 3 cut(s) 10, 205, 2140
BsrGI TGTACA 1 cut(s) 1719
BsrI ACTGG 6 cut(s) 1184, 1486, 1504, 1606, 1997, 2265
BssAI RCCGGY 3 cut(s) 10, 205, 2140
BssECI CCNNGG 6 cut(s) 492, 541, 1447, 1666, 1949, 2523
BssHII GCGCGC 2 cut(s) 432, 716
BssNAI GTATAC 1 cut(s) 943
BssNI GRCGYC 2 cut(s) 5, 489
BssSI CACGAG 3 cut(s) 384, 1278, 1691
BssT1I CCWWGG 3 cut(s) 1447, 1666, 2523
Bst1107I GTATAC 1 cut(s) 943
Bst2BI CACGAG 3 cut(s) 384, 1278, 1691
Bst2UI CCWGG 6 cut(s) 143, 520, 1126, 1857, 1950, 2394
Bst4CI ACNGT 3 cut(s) 1095, 1984, 2656
Bst6I CTCTTC 2 cut(s) 237, 2487
BstACI GRCGYC 2 cut(s) 5, 489
BstAUI TGTACA 1 cut(s) 1719
BstBI TTCGAA 1 cut(s) 1558
BstC8I GCNNGC 8 cut(s) 12, 434, 534, 552, 718, 1181, 1542, 2013
BstDEI CTNAG 6 cut(s) 455, 800, 1942, 1964, 2022, 2067
BstDSI CCRYGG 4 cut(s) 541, 1447, 1666, 2523
BstEII GGTNACC 1 cut(s) 2380
BstENI CCTNNNNNAGG 1 cut(s) 146
BstF5I GGATG 9 cut(s) 588, 763, 1230, 1662, 1722, 1960, 2431, 2562, 2641
BstFNI CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
BstHHI GCGC 9 cut(s) 92, 205, 376, 434, 436, 718, 720, 971, 1758
BstMAI GTCTC 6 cut(s) 242, 555, 930, 1024, 1058, 1983
BstMWI GCNNNNNNNGC 7 cut(s) 87, 303, 440, 505, 796, 826, 1196
BstNI CCWGG 6 cut(s) 143, 520, 1126, 1857, 1950, 2394
BstNSI RCATGY 2 cut(s) 1386, 1773
BstPAI GACNNNNGTC 1 cut(s) 567
BstPI GGTNACC 1 cut(s) 2380
BstSCI CCNGG 7 cut(s) 141, 518, 1124, 1819, 1855, 1948, 2392
BstSFI CTRYAG 4 cut(s) 46, 952, 1200, 1341
BstSLI GKGCMC 1 cut(s) 2140
BstUI CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
BstV1I GCAGC 7 cut(s) 84, 207, 1166, 1186, 1556, 2112, 2307
BstV2I GAAGAC 1 cut(s) 345
BstX2I RGATCY 1 cut(s) 2224
BstXI CCANNNNNNTGG 1 cut(s) 1920
BstYI RGATCY 1 cut(s) 2224
BstZ17I GTATAC 1 cut(s) 943
Bsu36I CCTNAGG 1 cut(s) 455
BsuI GTATCC 2 cut(s) 681, 1772
BsuRI GGCC 6 cut(s) 453, 518, 536, 1012, 1226, 1526
BtgI CCRYGG 4 cut(s) 541, 1447, 1666, 2523
BtsCI GGATG 9 cut(s) 588, 763, 1230, 1662, 1722, 1960, 2431, 2562, 2641
BtsI GCAGTG 1 cut(s) 920
BtsIMutI CAGTG 4 cut(s) 920, 1055, 1479, 1972
Cac8I GCNNGC 8 cut(s) 12, 434, 534, 552, 718, 1181, 1542, 2013
CaiI CAGNNNCTG 2 cut(s) 997, 1949
CciI TCATGA 2 cut(s) 61, 676
CfoI GCGC 9 cut(s) 92, 205, 376, 434, 436, 718, 720, 971, 1758
Cfr10I RCCGGY 3 cut(s) 10, 205, 2140
Cfr13I GGNCC 8 cut(s) 342, 479, 700, 1011, 1225, 1484, 2126, 2527
CseI GACGC 5 cut(s) 187, 339, 497, 2005, 2203
CsiI ACCWGGT 1 cut(s) 141
Csp6I GTAC 4 cut(s) 1681, 1720, 1867, 2283
CspCI CAANNNNNGTGG 2 cut(s) 65, 100
CviQI GTAC 4 cut(s) 1681, 1720, 1867, 2283
DdeI CTNAG 6 cut(s) 455, 800, 1942, 1964, 2022, 2067
DraI TTTAAA 2 cut(s) 1162, 2413
DrdI GACNNNNNNGTC 1 cut(s) 349
DseDI GACNNNNNNGTC 1 cut(s) 349
EaeI YGGCCR 2 cut(s) 534, 1524
Eam1104I CTCTTC 2 cut(s) 237, 2487
EarI CTCTTC 2 cut(s) 237, 2487
EciI GGCGGA 2 cut(s) 369, 602
Ecl136II GAGCTC 2 cut(s) 163, 443
Eco130I CCWWGG 3 cut(s) 1447, 1666, 2523
Eco24I GRGCYC 2 cut(s) 165, 445
Eco47I GGWCC 6 cut(s) 342, 479, 700, 1484, 2126, 2527
Eco53kI GAGCTC 2 cut(s) 163, 443
Eco57I CTGAAG 5 cut(s) 422, 792, 864, 991, 1031
Eco81I CCTNAGG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 2380
EcoICRI GAGCTC 2 cut(s) 163, 443
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoO65I GGTNACC 1 cut(s) 2380
EcoRI GAATTC 2 cut(s) 1000, 1503
EcoRII CCWGG 6 cut(s) 141, 518, 1124, 1855, 1948, 2392
EcoT14I CCWWGG 3 cut(s) 1447, 1666, 2523
EcoT22I ATGCAT 1 cut(s) 578
EcoT38I GRGCYC 2 cut(s) 165, 445
ErhI CCWWGG 3 cut(s) 1447, 1666, 2523
Esp3I CGTCTC 1 cut(s) 930
FalI AAGNNNNNCTT 4 cut(s) 909, 941, 2214, 2246
FaqI GGGAC 1 cut(s) 268
FauNDI CATATG 1 cut(s) 2131
FbaI TGATCA 2 cut(s) 58, 321
FblI GTMKAC 3 cut(s) 942, 1647, 2487
FokI GGATG 9 cut(s) 595, 770, 1217, 1649, 1729, 1967, 2438, 2549, 2628
FriOI GRGCYC 2 cut(s) 165, 445
GlaI GCGC 9 cut(s) 91, 204, 375, 433, 435, 717, 719, 970, 1757
GsaI CCCAGC 1 cut(s) 1371
HaeIII GGCC 6 cut(s) 453, 518, 536, 1012, 1226, 1526
HapII CCGG 7 cut(s) 11, 206, 224, 363, 477, 1821, 2141
HgaI GACGC 5 cut(s) 187, 339, 497, 2005, 2203
HhaI GCGC 9 cut(s) 92, 205, 376, 434, 436, 718, 720, 971, 1758
Hin1I GRCGYC 2 cut(s) 5, 489
Hin6I GCGC 9 cut(s) 90, 203, 374, 432, 434, 716, 718, 969, 1756
HinP1I GCGC 9 cut(s) 90, 203, 374, 432, 434, 716, 718, 969, 1756
HincII GTYRAC 2 cut(s) 2511, 2560
HindII GTYRAC 2 cut(s) 2511, 2560
HindIII AAGCTT 2 cut(s) 410, 1214
HinfI GANTC 9 cut(s) 527, 590, 765, 988, 1018, 1549, 2264, 2418, 2587
HpaII CCGG 7 cut(s) 11, 206, 224, 363, 477, 1821, 2141
HphI GGTGA 5 cut(s) 1525, 1582, 1930, 2510, 2512
Hpy188III TCNNGA 4 cut(s) 62, 661, 677, 2683
Hpy99I CGWCG 9 cut(s) 10, 25, 176, 179, 203, 334, 337, 340, 491
HpyAV CCTTC 7 cut(s) 264, 397, 658, 731, 1015, 1484, 1554
HpyCH4III ACNGT 3 cut(s) 1095, 1984, 2656
HpyCH4IV ACGT 5 cut(s) 5, 287, 939, 1650, 2695
HpyF10VI GCNNNNNNNGC 7 cut(s) 87, 303, 440, 505, 796, 826, 1196
HpyF3I CTNAG 6 cut(s) 455, 800, 1942, 1964, 2022, 2067
HpySE526I ACGT 5 cut(s) 5, 287, 939, 1650, 2695
Hsp92I GRCGYC 2 cut(s) 5, 489
HspAI GCGC 9 cut(s) 90, 203, 374, 432, 434, 716, 718, 969, 1756
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 58, 321
LmnI GCTCC 5 cut(s) 273, 294, 496, 1196, 2195
Lsp1109I GCAGC 7 cut(s) 84, 207, 1166, 1186, 1556, 2112, 2307
LweI GCATC 5 cut(s) 563, 703, 1969, 2491, 2650
MabI ACCWGGT 1 cut(s) 141
MaeII ACGT 5 cut(s) 5, 287, 939, 1650, 2695
MaeIII GTNAC 6 cut(s) 151, 288, 1250, 1385, 1550, 2380
MfeI CAATTG 2 cut(s) 911, 1347
MflI RGATCY 1 cut(s) 2224
MhlI GDGCHC 3 cut(s) 165, 445, 2140
MlsI TGGCCA 1 cut(s) 1526
MluNI TGGCCA 1 cut(s) 1526
MlyI GAGTC 6 cut(s) 536, 584, 997, 1558, 2427, 2581
MmeI TCCRAC 4 cut(s) 381, 965, 1061, 1966
Mox20I TGGCCA 1 cut(s) 1526
Mph1103I ATGCAT 1 cut(s) 578
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 2 cut(s) 672, 1004
MscI TGGCCA 1 cut(s) 1526
MslI CAYNNNNRTG 8 cut(s) 188, 313, 581, 1048, 1261, 1918, 1965, 2317
Msp20I TGGCCA 1 cut(s) 1526
MspI CCGG 7 cut(s) 11, 206, 224, 363, 477, 1821, 2141
MspR9I CCNGG 7 cut(s) 143, 520, 1126, 1821, 1857, 1950, 2394
MunI CAATTG 2 cut(s) 911, 1347
Mva1269I GAATGC 2 cut(s) 267, 297
MvaI CCWGG 6 cut(s) 143, 520, 1126, 1857, 1950, 2394
MvnI CGCG 6 cut(s) 203, 350, 374, 434, 718, 1077
MwoI GCNNNNNNNGC 7 cut(s) 87, 303, 440, 505, 796, 826, 1196
NaeI GCCGGC 1 cut(s) 12
NciI CCSGG 1 cut(s) 1821
NcoI CCATGG 3 cut(s) 1447, 1666, 2523
NdeI CATATG 1 cut(s) 2131
NgoMIV GCCGGC 1 cut(s) 10
NheI GCTAGC 1 cut(s) 1540
NlaIV GGNNCC 6 cut(s) 31, 275, 1373, 1925, 2139, 2575
NmeAIII GCCGAG 1 cut(s) 517
NmuCI GTSAC 4 cut(s) 151, 288, 1385, 1550
NsiI ATGCAT 1 cut(s) 578
NspI RCATGY 2 cut(s) 1386, 1773
NspV TTCGAA 1 cut(s) 1558
OliI CACNNNNGTG 1 cut(s) 1048
PagI TCATGA 2 cut(s) 61, 676
PauI GCGCGC 2 cut(s) 432, 716
PciI ACATGT 1 cut(s) 1769
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 195, 335, 659, 1276, 1544
PctI GAATGC 2 cut(s) 267, 297
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 2 cut(s) 672, 1004
PfeI GAWTC 3 cut(s) 765, 1018, 2264
PflFI GACNNNGTC 2 cut(s) 19, 185
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 6 cut(s) 535, 584, 996, 1557, 2426, 2581
PpsI GAGTC 6 cut(s) 535, 584, 996, 1557, 2426, 2581
PscI ACATGT 1 cut(s) 1769
PshAI GACNNNNGTC 1 cut(s) 567
PshBI ATTAAT 1 cut(s) 1314
PsiI TTATAA 1 cut(s) 794
Psp124BI GAGCTC 2 cut(s) 165, 445
Psp6I CCWGG 6 cut(s) 141, 518, 1124, 1855, 1948, 2392
PspEI GGTNACC 1 cut(s) 2380
PspFI CCCAGC 1 cut(s) 1367
PspGI CCWGG 6 cut(s) 141, 518, 1124, 1855, 1948, 2392
PspN4I GGNNCC 6 cut(s) 31, 275, 1373, 1925, 2139, 2575
PspPI GGNCC 8 cut(s) 342, 479, 700, 1011, 1225, 1484, 2126, 2527
PstI CTGCAG 1 cut(s) 1204
PstNI CAGNNNCTG 2 cut(s) 997, 1949
PsuI RGATCY 1 cut(s) 2224
PsyI GACNNNGTC 2 cut(s) 19, 185
PteI GCGCGC 2 cut(s) 432, 716
RsaI GTAC 4 cut(s) 1682, 1721, 1868, 2284
RsaNI GTAC 4 cut(s) 1681, 1720, 1867, 2283
RseI CAYNNNNRTG 8 cut(s) 188, 313, 581, 1048, 1261, 1918, 1965, 2317
SacI GAGCTC 2 cut(s) 165, 445
Sau96I GGNCC 8 cut(s) 342, 479, 700, 1011, 1225, 1484, 2126, 2527
SchI GAGTC 6 cut(s) 536, 584, 997, 1558, 2427, 2581
ScrFI CCNGG 7 cut(s) 143, 520, 1126, 1821, 1857, 1950, 2394
SduI GDGCHC 3 cut(s) 165, 445, 2140
SexAI ACCWGGT 1 cut(s) 141
SfaNI GCATC 5 cut(s) 563, 703, 1969, 2491, 2650
SfcI CTRYAG 4 cut(s) 46, 952, 1200, 1341
SfuI TTCGAA 1 cut(s) 1558
SgrAI CRCCGGYG 2 cut(s) 10, 205
SinI GGWCC 6 cut(s) 342, 479, 700, 1484, 2126, 2527
SmiMI CAYNNNNRTG 8 cut(s) 188, 313, 581, 1048, 1261, 1918, 1965, 2317
SpeI ACTAGT 2 cut(s) 2057, 2279
SstI GAGCTC 2 cut(s) 165, 445
StyD4I CCNGG 7 cut(s) 141, 518, 1124, 1819, 1855, 1948, 2392
StyI CCWWGG 3 cut(s) 1447, 1666, 2523
TaaI ACNGT 3 cut(s) 1095, 1984, 2656
TaiI ACGT 5 cut(s) 8, 290, 942, 1653, 2698
TaqI TCGA 9 cut(s) 338, 428, 525, 571, 735, 1270, 1558, 2403, 2651
TatI WGTACW 4 cut(s) 1680, 1719, 1866, 2282
TauI GCSGC 5 cut(s) 90, 306, 350, 640, 643
TfiI GAWTC 3 cut(s) 765, 1018, 2264
TscAI CASTG 4 cut(s) 927, 1055, 1486, 1972
TseFI GTSAC 4 cut(s) 151, 288, 1385, 1550
TseI GCWGC 7 cut(s) 97, 195, 1154, 1199, 1544, 2100, 2295
Tsp45I GTSAC 4 cut(s) 151, 288, 1385, 1550
TspDTI ATGAA 9 cut(s) 451, 665, 846, 1282, 1352, 1961, 2025, 2039, 2442
TspGWI ACGGA 3 cut(s) 307, 433, 558
TspRI CASTG 4 cut(s) 927, 1055, 1486, 1972
Tth111I GACNNNGTC 2 cut(s) 19, 185
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 6 cut(s) 342, 479, 700, 1484, 2126, 2527
VspI ATTAAT 1 cut(s) 1314
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 7 cut(s) 726, 886, 1000, 1130, 1421, 1469, 1503
XceI RCATGY 2 cut(s) 1386, 1773
XcmI CCANNNNNNNNNTGG 1 cut(s) 2549
XmiI GTMKAC 3 cut(s) 942, 1647, 2487
XmnI GAANNNNTTC 2 cut(s) 672, 1004
ZraI GACGTC 1 cut(s) 6
Zsp2I ATGCAT 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.