RLG00000016598

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0003315
Physical Location & Seq
Reverse (-)
8101882 .. 8106168
4287 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016598

Sequence Viewer

Length: 2766 bp
ATGACGTCGCCGGCGACCCCGTCGTTTGGTTCCAAGCGATCAAACTACAGCTTACCTGATCATGATCGTCAGCACCACCGCCTTTGCGGCGCAATGCTGCCTATATTTCTCAACGACCTCACTAATCACGACAACCAAGACCTGGTCGAGGTCACACTAGAGCTCAACAACGACGACGATGACATTGTCGTGTGCAGCGTCGCGCCGGTGGGGAACGACACGCCGGAGGAGGAGGAGGAAGAGGAGACGGGGACAGGAATGCTAGGAAGGAGCCTCTCCGCTACGTCACGGAGCATTCGCCGCACATTCGGGTGGCTGATCAGATCGTCGTCGTCGAGGACCGCCGCGTCTTCCAACTCCGGCGAACTCGCGCTTCCGCCACGAGAGGCGAGGAGGCTGAAGGCGAAGCTTCAACGGACAAGATCGAGCGCCCAAAGAGCTCTCAACGGCCTGAGGTTCATCAGCAAGACCACCGGACCTAGCGACGCCGAGGAGCTGTGGAAGCAAGTGGAGGCCAGGTTCGAGTCGCTGGCCGTCCACGGATTGCTCGCCAGAGGAGACTTTGGTCGATGCATAGGGATGGCGGACTCGGAGGAGTTTGCGGTGGGGATATTTGACACATTGGCGAGGAGGCGGCGGCAGAAAATTACGAAGATCACGAAGGAAGAACTTCATGATTTTTGGATACAAATCTCGGACCAGAGCTTTGATGCGCGCCTTCAAATTTTCTTCGACATGGCAGATAGCAATGAGGATGGAAGAATAACAAGGGAGGGAGTGCAAGAGCTTATAATGCTGAGTGCTTCAGCAAACAAGCTATCAAAGCTGAAAGAACAAGCTGAAGAATATGCTTCATTGATAATGGAAGAACTAGACCCTGAAAACTTTGGTTATATTGAGTTATGGCAATTGGAAGCACTGCTTTTACAAAGAGACGTATACATAAACTACAGCAGACCATTGAGCGCAGTAAGTGTAGGTTGGAGTCAGAACCTGAGTTCCTTCAGGCCCAAGAATCTGCTTCGGAGACTAAATCGTTCACTTCAGTGTCTCATACTAGACAATTGGCAGCGTGGTTGGATTTTATTACTGTGGATTGTTGCAATGGCTTCACTTTTTGCCTGGAAATTCTACCAATACAGAAATAAAGCAGCGTTTGAAGTCATCGGCTATTGCTTGCCAGTAGCCAAAGGAGCTGCAGAAACTTTGAAGCTTAACATGGCCCTCATCCTTTTACCTGTTTGTCGTAACACACTGACATGGCTTCGATCAACACGAGCTAGGTCCTTCATTCCCTTTGATGACAACATTAATTTCCACAAGATGATTGCATTTGCTATAGCAATTGGAATAATTGTTCACGCTGGGAACCATGTGGCATGTGACTTTCCTCGTCTAGTAAACTCATCTGCGGAAGAATTTGAGCCAATATCCTTTGATTTCCATGGCAAAAAACCGACGTACAAATTCTTATTCACTGGACCAGAAGGCTTGACTGGAATTCTGATGGTGATTTTTATGGCCATCTCATTCACGCTAGCAGCGAGTCACTTTCGAAGGAACATGGTGAGGCTTCCTGCCCCCCTGAGCAAACTGACTGGGTTTAATGCGTTCTGGTATTCTCATCATCTGCTAGGTCTGGTCTACGTTTTGCTACTCATCCACGGAAGCTGTTTGTACTTTGTCCACGAGTGGTATCAGAAAACGACATGGATGTACATCTCTGTTCCATTTCTGCTGTATGTAGTAGAGCGCAGTATCCGAACATGTAGATCAAAACACTATTCAGTTAAGATACTAAAGGCTACAATCTTACCCGGAAATGTTATCAGCTTAATCATGTCCAAGCCACCTGGATTTAAGTACAGAAGTGGGCAATACATATTTCTACAATGCCCAACAATCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCAGCACCTGGGGATGAGCATCTCAGTGTTCATATCCGAACAGTTGGAGACTGGACGCAAGAATTGAAGCGAGCCATTTCTGAGGGAGATCATTCATTATCTTTAGTTCATCGGACTAGTGTTGCTCAGCCACAAGATATGGATCAAATAAGACTATGCAGCCAACCCAAATTGTTTTTTGATGGTCCATATGGGGCACCGGCACAGGACTACCGCAATTATGATGTCCTACTCCTTGTGGGTCTTGGCATTGGAGCTACCCCTTTTGTAAGCATCCTTAAGGATCTTCTTAACAGCACAAGAACAGCAGAAGAGCAACTGGATTCAAATACAGAAACTAGTACACCATCAGGCAGCCTAAATAGTTTTACATCATCATGTTTGACACCCAATGACAAGAAGAAATCACAGAGGACTACAAATGCTCATTTCTATTGGGTTACCAGAGAACCTGGCTCTTTCGAGTGGTTTAAAGGAGTCATGGATGAAGTGGCAGAAATGGATCACAAAGGTCAGATTGAACTTCACAACTACCTTACGAGTGTCTACGAAGAGGGTGATGCAAGGTCAACTCTAATCACCATGGTCCAAGCTCTCAACCATGCCAAACATGGAGTTGACATCCTATCTGGCACCAGAGTAATGACTCATTTTGCAAGACCTAATTGGAAAGAAGTGTTTACCAAGATAGCTTCCAAGCATCCATTTTTGACAGTAGGGGTATTCTACTGTGGGATGCCAATGTTAGCAAAGGAGCTGAAGATGCTATCACTTGAGCTCAGTCACAAGACATCGACACGCTTTGAATTCCACAAGGAGTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

922

Amino Acids

104.62

Weight (kDa)

7.9

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 136 - 238 1.3e-38 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 406 - 552 1.7e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 595 - 714 1.1e-30 FAD-binding domain
NAD_binding_6 PF08030 720 - 902 7.6e-48 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
AasI GACNNNNNNGTC 1 cut(s) 346
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 1920, 2134, 2570
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 3 cut(s) 939, 1644, 2484
AccII CGCG 4 cut(s) 203, 347, 371, 715
AclWI GGATC 3 cut(s) 2088, 2229, 2448
AcoI YGGCCR 2 cut(s) 531, 1521
AcsI RAATTY 6 cut(s) 723, 1127, 1418, 1466, 1500, 2744
AcuI CTGAAG 6 cut(s) 419, 789, 861, 988, 1028, 2717
AcyI GRCGYC 2 cut(s) 5, 486
AfaI GTAC 6 cut(s) 1463, 1679, 1718, 1865, 2281, 2759
AfiI CCNNNNNNNGG 3 cut(s) 26, 142, 148
AflII CTTAAG 1 cut(s) 2216
AflIII ACRYGT 1 cut(s) 1766
AgsI TTSAA 9 cut(s) 413, 722, 1160, 1210, 1916, 2005, 2265, 2459, 2744
AhlI ACTAGT 2 cut(s) 2054, 2276
AjnI CCWGG 6 cut(s) 141, 515, 1121, 1852, 1945, 2389
AleI CACNNNNGTG 1 cut(s) 1045
AloI GAACNNNNNNTCC 6 cut(s) 503, 535, 983, 1015, 1341, 1373
Alw21I GWGCWC 3 cut(s) 165, 442, 2718
Alw26I GTCTC 6 cut(s) 239, 552, 927, 1021, 1055, 1980
AlwI GGATC 3 cut(s) 2088, 2229, 2448
AlwNI CAGNNNCTG 2 cut(s) 994, 1946
AoxI GGCC 6 cut(s) 448, 513, 531, 1007, 1221, 1521
ApeKI GCWGC 8 cut(s) 97, 195, 1069, 1151, 1196, 1541, 2097, 2292
ApoI RAATTY 6 cut(s) 723, 1127, 1418, 1466, 1500, 2744
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
AseI ATTAAT 1 cut(s) 1311
Asp700I GAANNNNTTC 1 cut(s) 669
AspLEI GCGC 8 cut(s) 92, 205, 373, 431, 715, 717, 968, 1755
AspS9I GGNCC 9 cut(s) 339, 476, 697, 1008, 1222, 1284, 1481, 2123, 2524
AsuC2I CCSGG 1 cut(s) 1818
AsuHPI GGTGA 5 cut(s) 1522, 1579, 1927, 2507, 2509
AsuII TTCGAA 1 cut(s) 1555
AsuNHI GCTAGC 1 cut(s) 1537
AvaII GGWCC 7 cut(s) 339, 476, 697, 1284, 1481, 2123, 2524
AxyI CCTNAGG 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 2137
BalI TGGCCA 1 cut(s) 1523
BanI GGYRCC 3 cut(s) 1920, 2134, 2570
BanII GRGCYC 3 cut(s) 165, 442, 2718
BauI CACGAG 3 cut(s) 381, 1275, 1688
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 3 cut(s) 165, 442, 2718
BbvCI CCTCAGC 1 cut(s) 1939
BbvI GCAGC 8 cut(s) 84, 207, 1081, 1163, 1183, 1553, 2109, 2304
BccI CCATC 7 cut(s) 574, 749, 1501, 1532, 1940, 2114, 2293
BceAI ACGGC 2 cut(s) 463, 518
BciT130I CCWGG 6 cut(s) 143, 517, 1123, 1854, 1947, 2391
BciVI GTATCC 2 cut(s) 678, 1769
BclI TGATCA 2 cut(s) 58, 318
BcnI CCSGG 1 cut(s) 1818
BcoDI GTCTC 6 cut(s) 239, 552, 927, 1021, 1055, 1980
BcuI ACTAGT 2 cut(s) 2054, 2276
BfmI CTRYAG 4 cut(s) 46, 949, 1197, 1338
BfoI RGCGCY 1 cut(s) 432
BfrI CTTAAG 1 cut(s) 2216
BfuI GTATCC 2 cut(s) 678, 1769
BglI GCCNNNNNGGC 1 cut(s) 87
BlpI GCTNAGC 1 cut(s) 2064
BmcAI AGTACT 1 cut(s) 2759
Bme1390I CCNGG 7 cut(s) 143, 517, 1123, 1818, 1854, 1947, 2391
Bme18I GGWCC 7 cut(s) 339, 476, 697, 1284, 1481, 2123, 2524
BmgT120I GGNCC 9 cut(s) 339, 476, 697, 1008, 1222, 1284, 1481, 2123, 2524
BmiI GGNNCC 6 cut(s) 31, 272, 1370, 1922, 2136, 2572
BmrFI CCNGG 7 cut(s) 143, 517, 1123, 1818, 1854, 1947, 2391
BmrI ACTGGG 1 cut(s) 1608
BmsI GCATC 8 cut(s) 560, 700, 1966, 2220, 2488, 2647, 2664, 2691
BmtI GCTAGC 1 cut(s) 1541
BmuI ACTGGG 1 cut(s) 1608
BoxI GACNNNNGTC 1 cut(s) 564
BpiI GAAGAC 1 cut(s) 342
Bpu10I CCTNAGC 2 cut(s) 1586, 1939
Bpu1102I GCTNAGC 1 cut(s) 2064
Bpu14I TTCGAA 1 cut(s) 1555
BpuEI CTTGAG 1 cut(s) 2732
BpuMI CCSGG 1 cut(s) 1818
BsaBI GATNNNNATC 5 cut(s) 63, 689, 1718, 1956, 2079
BsaHI GRCGYC 2 cut(s) 5, 486
BsaJI CCNNGG 6 cut(s) 489, 538, 1444, 1663, 1946, 2520
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 142, 148
Bse118I RCCGGY 3 cut(s) 10, 205, 2137
Bse1I ACTGG 6 cut(s) 1181, 1483, 1501, 1603, 1994, 2262
Bse21I CCTNAGG 1 cut(s) 452
Bse3DI GCAATG 3 cut(s) 99, 754, 1110
Bse8I GATNNNNATC 5 cut(s) 63, 689, 1718, 1956, 2079
BseBI CCWGG 6 cut(s) 143, 517, 1123, 1854, 1947, 2391
BseDI CCNNGG 6 cut(s) 489, 538, 1444, 1663, 1946, 2520
BseJI GATNNNNATC 5 cut(s) 63, 689, 1718, 1956, 2079
BseLI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BseMI GCAATG 3 cut(s) 99, 754, 1110
BseMII CTCAG 9 cut(s) 443, 788, 986, 1577, 1953, 1975, 2010, 2078, 2731
BseNI ACTGG 6 cut(s) 1181, 1483, 1501, 1603, 1994, 2262
BsePI GCGCGC 1 cut(s) 713
BseRI GAGGAG 9 cut(s) 242, 245, 248, 257, 406, 506, 570, 608, 643
BseSI GKGCMC 1 cut(s) 2137
BseXI GCAGC 8 cut(s) 84, 207, 1081, 1163, 1183, 1553, 2109, 2304
BseYI CCCAGC 1 cut(s) 1364
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 4 cut(s) 203, 347, 371, 715
BshFI GGCC 6 cut(s) 450, 515, 533, 1009, 1223, 1523
BshNI GGYRCC 3 cut(s) 1920, 2134, 2570
BsiHKAI GWGCWC 3 cut(s) 165, 442, 2718
BsiSI CCGG 7 cut(s) 11, 206, 224, 360, 474, 1818, 2138
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 3 cut(s) 26, 142, 148
BsmAI GTCTC 6 cut(s) 239, 552, 927, 1021, 1055, 1980
BsmBI CGTCTC 2 cut(s) 239, 927
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 2 cut(s) 264, 294
BsnI GGCC 6 cut(s) 450, 515, 533, 1009, 1223, 1523
Bsp119I TTCGAA 1 cut(s) 1555
Bsp1286I GDGCHC 4 cut(s) 165, 442, 2137, 2718
Bsp1407I TGTACA 1 cut(s) 1716
Bsp1720I GCTNAGC 1 cut(s) 2064
Bsp19I CCATGG 2 cut(s) 1444, 2520
BspANI GGCC 6 cut(s) 450, 515, 533, 1009, 1223, 1523
BspCNI CTCAG 9 cut(s) 444, 789, 987, 1578, 1952, 1974, 2011, 2077, 2730
BspFNI CGCG 4 cut(s) 203, 347, 371, 715
BspHI TCATGA 2 cut(s) 61, 673
BspLI GGNNCC 6 cut(s) 31, 272, 1370, 1922, 2136, 2572
BspMAI CTGCAG 1 cut(s) 1201
BspOI GCTAGC 1 cut(s) 1541
BspPI GGATC 3 cut(s) 2088, 2229, 2448
BspQI GCTCTTC 1 cut(s) 2244
BspT104I TTCGAA 1 cut(s) 1555
BspT107I GGYRCC 3 cut(s) 1920, 2134, 2570
BspTI CTTAAG 1 cut(s) 2216
BsrDI GCAATG 3 cut(s) 99, 754, 1110
BsrFI RCCGGY 3 cut(s) 10, 205, 2137
BsrGI TGTACA 1 cut(s) 1716
BsrI ACTGG 6 cut(s) 1181, 1483, 1501, 1603, 1994, 2262
BssAI RCCGGY 3 cut(s) 10, 205, 2137
BssECI CCNNGG 6 cut(s) 489, 538, 1444, 1663, 1946, 2520
BssHII GCGCGC 1 cut(s) 713
BssNAI GTATAC 1 cut(s) 940
BssNI GRCGYC 2 cut(s) 5, 486
BssSI CACGAG 3 cut(s) 381, 1275, 1688
BssT1I CCWWGG 2 cut(s) 1444, 2520
Bst1107I GTATAC 1 cut(s) 940
Bst2BI CACGAG 3 cut(s) 381, 1275, 1688
Bst2UI CCWGG 6 cut(s) 143, 517, 1123, 1854, 1947, 2391
Bst4CI ACNGT 4 cut(s) 1092, 1981, 2653, 2669
Bst6I CTCTTC 3 cut(s) 234, 2244, 2484
BstACI GRCGYC 2 cut(s) 5, 486
BstAFI CTTAAG 1 cut(s) 2216
BstAUI TGTACA 1 cut(s) 1716
BstBI TTCGAA 1 cut(s) 1555
BstC8I GCNNGC 7 cut(s) 12, 531, 549, 715, 1178, 1539, 2010
BstDEI CTNAG 9 cut(s) 452, 797, 995, 1586, 1939, 1961, 2019, 2064, 2717
BstDSI CCRYGG 4 cut(s) 538, 1444, 1663, 2520
BstEII GGTNACC 1 cut(s) 2377
BstENI CCTNNNNNAGG 1 cut(s) 146
BstFNI CGCG 4 cut(s) 203, 347, 371, 715
BstH2I RGCGCY 1 cut(s) 432
BstHHI GCGC 8 cut(s) 92, 205, 373, 431, 715, 717, 968, 1755
BstMAI GTCTC 6 cut(s) 239, 552, 927, 1021, 1055, 1980
BstMWI GCNNNNNNNGC 8 cut(s) 87, 300, 437, 502, 793, 823, 1193, 2701
BstNI CCWGG 6 cut(s) 143, 517, 1123, 1854, 1947, 2391
BstNSI RCATGY 2 cut(s) 1383, 1770
BstPAI GACNNNNGTC 1 cut(s) 564
BstPI GGTNACC 1 cut(s) 2377
BstSCI CCNGG 7 cut(s) 141, 515, 1121, 1816, 1852, 1945, 2389
BstSFI CTRYAG 4 cut(s) 46, 949, 1197, 1338
BstSLI GKGCMC 1 cut(s) 2137
BstUI CGCG 4 cut(s) 203, 347, 371, 715
BstV1I GCAGC 8 cut(s) 84, 207, 1081, 1163, 1183, 1553, 2109, 2304
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 1 cut(s) 2221
BstXI CCANNNNNNTGG 1 cut(s) 1917
BstYI RGATCY 1 cut(s) 2221
BstZ17I GTATAC 1 cut(s) 940
Bsu36I CCTNAGG 1 cut(s) 452
BsuI GTATCC 2 cut(s) 678, 1769
BsuRI GGCC 6 cut(s) 450, 515, 533, 1009, 1223, 1523
BtgI CCRYGG 4 cut(s) 538, 1444, 1663, 2520
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 5 cut(s) 917, 1052, 1253, 1476, 1969
Cac8I GCNNGC 7 cut(s) 12, 531, 549, 715, 1178, 1539, 2010
CaiI CAGNNNCTG 2 cut(s) 994, 1946
CciI TCATGA 2 cut(s) 61, 673
CfoI GCGC 8 cut(s) 92, 205, 373, 431, 715, 717, 968, 1755
Cfr10I RCCGGY 3 cut(s) 10, 205, 2137
Cfr13I GGNCC 9 cut(s) 339, 476, 697, 1008, 1222, 1284, 1481, 2123, 2524
CseI GACGC 4 cut(s) 187, 336, 494, 2002
CsiI ACCWGGT 1 cut(s) 141
Csp6I GTAC 6 cut(s) 1462, 1678, 1717, 1864, 2280, 2758
CspCI CAANNNNNGTGG 2 cut(s) 65, 100
CviQI GTAC 6 cut(s) 1462, 1678, 1717, 1864, 2280, 2758
DdeI CTNAG 9 cut(s) 452, 797, 995, 1586, 1939, 1961, 2019, 2064, 2717
DraI TTTAAA 1 cut(s) 2410
DrdI GACNNNNNNGTC 1 cut(s) 346
DseDI GACNNNNNNGTC 1 cut(s) 346
EaeI YGGCCR 2 cut(s) 531, 1521
Eam1104I CTCTTC 3 cut(s) 234, 2244, 2484
EarI CTCTTC 3 cut(s) 234, 2244, 2484
EciI GGCGGA 2 cut(s) 366, 599
Ecl136II GAGCTC 3 cut(s) 163, 440, 2716
Eco130I CCWWGG 2 cut(s) 1444, 2520
Eco24I GRGCYC 3 cut(s) 165, 442, 2718
Eco47I GGWCC 7 cut(s) 339, 476, 697, 1284, 1481, 2123, 2524
Eco53kI GAGCTC 3 cut(s) 163, 440, 2716
Eco57I CTGAAG 6 cut(s) 419, 789, 861, 988, 1028, 2717
Eco81I CCTNAGG 1 cut(s) 452
Eco91I GGTNACC 1 cut(s) 2377
EcoICRI GAGCTC 3 cut(s) 163, 440, 2716
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoO109I RGGNCCY 1 cut(s) 1284
EcoO65I GGTNACC 1 cut(s) 2377
EcoRI GAATTC 2 cut(s) 1500, 2744
EcoRII CCWGG 6 cut(s) 141, 515, 1121, 1852, 1945, 2389
EcoT14I CCWWGG 2 cut(s) 1444, 2520
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 3 cut(s) 165, 442, 2718
ErhI CCWWGG 2 cut(s) 1444, 2520
Esp3I CGTCTC 2 cut(s) 239, 927
FalI AAGNNNNNCTT 3 cut(s) 906, 938, 2744
FaqI GGGAC 1 cut(s) 265
FauNDI CATATG 1 cut(s) 2128
FbaI TGATCA 2 cut(s) 58, 318
FblI GTMKAC 3 cut(s) 939, 1644, 2484
FriOI GRGCYC 3 cut(s) 165, 442, 2718
GlaI GCGC 8 cut(s) 91, 204, 372, 430, 714, 716, 967, 1754
GsaI CCCAGC 1 cut(s) 1368
HaeII RGCGCY 1 cut(s) 432
HaeIII GGCC 6 cut(s) 450, 515, 533, 1009, 1223, 1523
HapII CCGG 7 cut(s) 11, 206, 224, 360, 474, 1818, 2138
HgaI GACGC 4 cut(s) 187, 336, 494, 2002
HhaI GCGC 8 cut(s) 92, 205, 373, 431, 715, 717, 968, 1755
Hin1I GRCGYC 2 cut(s) 5, 486
Hin6I GCGC 8 cut(s) 90, 203, 371, 429, 713, 715, 966, 1753
HinP1I GCGC 8 cut(s) 90, 203, 371, 429, 713, 715, 966, 1753
HincII GTYRAC 2 cut(s) 2508, 2557
HindII GTYRAC 2 cut(s) 2508, 2557
HindIII AAGCTT 2 cut(s) 407, 1211
HinfI GANTC 8 cut(s) 524, 587, 985, 1015, 1546, 2261, 2415, 2584
HpaII CCGG 7 cut(s) 11, 206, 224, 360, 474, 1818, 2138
HphI GGTGA 5 cut(s) 1522, 1579, 1927, 2507, 2509
Hpy188III TCNNGA 4 cut(s) 62, 128, 658, 674
HpyAV CCTTC 8 cut(s) 261, 394, 655, 728, 1012, 1297, 1481, 1551
HpyCH4III ACNGT 4 cut(s) 1092, 1981, 2653, 2669
HpyCH4IV ACGT 5 cut(s) 5, 284, 936, 1460, 1647
HpyCH4V TGCA 9 cut(s) 195, 573, 781, 1103, 1199, 1331, 2097, 2501, 2594
HpyF10VI GCNNNNNNNGC 8 cut(s) 87, 300, 437, 502, 793, 823, 1193, 2701
HpyF3I CTNAG 9 cut(s) 452, 797, 995, 1586, 1939, 1961, 2019, 2064, 2717
HpySE526I ACGT 5 cut(s) 5, 284, 936, 1460, 1647
Hsp92I GRCGYC 2 cut(s) 5, 486
HspAI GCGC 8 cut(s) 90, 203, 371, 429, 713, 715, 966, 1753
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 58, 318
LguI GCTCTTC 1 cut(s) 2244
LmnI GCTCC 6 cut(s) 270, 291, 493, 1193, 2192, 2692
Lsp1109I GCAGC 8 cut(s) 84, 207, 1081, 1163, 1183, 1553, 2109, 2304
LweI GCATC 8 cut(s) 560, 700, 1966, 2220, 2488, 2647, 2664, 2691
MabI ACCWGGT 1 cut(s) 141
MaeII ACGT 5 cut(s) 5, 284, 936, 1460, 1647
MaeIII GTNAC 7 cut(s) 151, 285, 1247, 1382, 1547, 2377, 2720
MfeI CAATTG 3 cut(s) 908, 1063, 1344
MflI RGATCY 1 cut(s) 2221
MhlI GDGCHC 4 cut(s) 165, 442, 2137, 2718
MlsI TGGCCA 1 cut(s) 1523
MluNI TGGCCA 1 cut(s) 1523
MlyI GAGTC 6 cut(s) 533, 581, 994, 1555, 2424, 2578
MmeI TCCRAC 4 cut(s) 378, 962, 1058, 1963
Mox20I TGGCCA 1 cut(s) 1523
Mph1103I ATGCAT 1 cut(s) 575
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 1 cut(s) 669
MscI TGGCCA 1 cut(s) 1523
MslI CAYNNNNRTG 8 cut(s) 188, 310, 578, 1045, 1258, 1915, 1962, 2314
Msp20I TGGCCA 1 cut(s) 1523
MspCI CTTAAG 1 cut(s) 2216
MspI CCGG 7 cut(s) 11, 206, 224, 360, 474, 1818, 2138
MspR9I CCNGG 7 cut(s) 143, 517, 1123, 1818, 1854, 1947, 2391
MunI CAATTG 3 cut(s) 908, 1063, 1344
Mva1269I GAATGC 2 cut(s) 264, 294
MvaI CCWGG 6 cut(s) 143, 517, 1123, 1854, 1947, 2391
MvnI CGCG 4 cut(s) 203, 347, 371, 715
MwoI GCNNNNNNNGC 8 cut(s) 87, 300, 437, 502, 793, 823, 1193, 2701
NaeI GCCGGC 1 cut(s) 12
NciI CCSGG 1 cut(s) 1818
NcoI CCATGG 2 cut(s) 1444, 2520
NdeI CATATG 1 cut(s) 2128
NgoMIV GCCGGC 1 cut(s) 10
NheI GCTAGC 1 cut(s) 1537
NlaIV GGNNCC 6 cut(s) 31, 272, 1370, 1922, 2136, 2572
NmeAIII GCCGAG 1 cut(s) 514
NmuCI GTSAC 5 cut(s) 151, 285, 1382, 1547, 2720
NsiI ATGCAT 1 cut(s) 575
NspI RCATGY 2 cut(s) 1383, 1770
NspV TTCGAA 1 cut(s) 1555
OliI CACNNNNGTG 1 cut(s) 1045
PagI TCATGA 2 cut(s) 61, 673
PauI GCGCGC 1 cut(s) 713
PciI ACATGT 1 cut(s) 1766
PciSI GCTCTTC 1 cut(s) 2244
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 195, 332, 656, 1273, 1541
PctI GAATGC 2 cut(s) 264, 294
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 2 cut(s) 1015, 2261
PflFI GACNNNGTC 3 cut(s) 19, 143, 185
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 6 cut(s) 532, 581, 993, 1554, 2423, 2578
PpsI GAGTC 6 cut(s) 532, 581, 993, 1554, 2423, 2578
PpuMI RGGWCCY 1 cut(s) 1284
PscI ACATGT 1 cut(s) 1766
PshAI GACNNNNGTC 1 cut(s) 564
PshBI ATTAAT 1 cut(s) 1311
PsiI TTATAA 1 cut(s) 791
Psp124BI GAGCTC 3 cut(s) 165, 442, 2718
Psp5II RGGWCCY 1 cut(s) 1284
Psp6I CCWGG 6 cut(s) 141, 515, 1121, 1852, 1945, 2389
PspEI GGTNACC 1 cut(s) 2377
PspFI CCCAGC 1 cut(s) 1364
PspGI CCWGG 6 cut(s) 141, 515, 1121, 1852, 1945, 2389
PspN4I GGNNCC 6 cut(s) 31, 272, 1370, 1922, 2136, 2572
PspPI GGNCC 9 cut(s) 339, 476, 697, 1008, 1222, 1284, 1481, 2123, 2524
PspPPI RGGWCCY 1 cut(s) 1284
PstI CTGCAG 1 cut(s) 1201
PstNI CAGNNNCTG 2 cut(s) 994, 1946
PsuI RGATCY 1 cut(s) 2221
PsyI GACNNNGTC 3 cut(s) 19, 143, 185
PteI GCGCGC 1 cut(s) 713
RsaI GTAC 6 cut(s) 1463, 1679, 1718, 1865, 2281, 2759
RsaNI GTAC 6 cut(s) 1462, 1678, 1717, 1864, 2280, 2758
RseI CAYNNNNRTG 8 cut(s) 188, 310, 578, 1045, 1258, 1915, 1962, 2314
SacI GAGCTC 3 cut(s) 165, 442, 2718
SapI GCTCTTC 1 cut(s) 2244
Sau96I GGNCC 9 cut(s) 339, 476, 697, 1008, 1222, 1284, 1481, 2123, 2524
ScaI AGTACT 1 cut(s) 2759
SchI GAGTC 6 cut(s) 533, 581, 994, 1555, 2424, 2578
ScrFI CCNGG 7 cut(s) 143, 517, 1123, 1818, 1854, 1947, 2391
SduI GDGCHC 4 cut(s) 165, 442, 2137, 2718
SexAI ACCWGGT 1 cut(s) 141
SfaNI GCATC 8 cut(s) 560, 700, 1966, 2220, 2488, 2647, 2664, 2691
SfcI CTRYAG 4 cut(s) 46, 949, 1197, 1338
SfuI TTCGAA 1 cut(s) 1555
SgrAI CRCCGGYG 2 cut(s) 10, 205
SinI GGWCC 7 cut(s) 339, 476, 697, 1284, 1481, 2123, 2524
SmiMI CAYNNNNRTG 8 cut(s) 188, 310, 578, 1045, 1258, 1915, 1962, 2314
SmlI CTYRAG 2 cut(s) 2216, 2711
SmoI CTYRAG 2 cut(s) 2216, 2711
SpeI ACTAGT 2 cut(s) 2054, 2276
SstI GAGCTC 3 cut(s) 165, 442, 2718
StyD4I CCNGG 7 cut(s) 141, 515, 1121, 1816, 1852, 1945, 2389
StyI CCWWGG 2 cut(s) 1444, 2520
TaaI ACNGT 4 cut(s) 1092, 1981, 2653, 2669
TaiI ACGT 5 cut(s) 8, 287, 939, 1463, 1650
TatI WGTACW 5 cut(s) 1677, 1716, 1863, 2279, 2757
TauI GCSGC 5 cut(s) 90, 303, 347, 637, 640
TfiI GAWTC 2 cut(s) 1015, 2261
TscAI CASTG 5 cut(s) 924, 1052, 1260, 1483, 1969
TseFI GTSAC 5 cut(s) 151, 285, 1382, 1547, 2720
TseI GCWGC 8 cut(s) 97, 195, 1069, 1151, 1196, 1541, 2097, 2292
Tsp45I GTSAC 5 cut(s) 151, 285, 1382, 1547, 2720
TspDTI ATGAA 8 cut(s) 448, 662, 843, 1279, 1958, 2022, 2036, 2439
TspGWI ACGGA 4 cut(s) 304, 430, 555, 1680
TspRI CASTG 5 cut(s) 924, 1052, 1260, 1483, 1969
Tth111I GACNNNGTC 3 cut(s) 19, 143, 185
Van91I CCANNNNNTGG 1 cut(s) 142
Vha464I CTTAAG 1 cut(s) 2216
VpaK11BI GGWCC 7 cut(s) 339, 476, 697, 1284, 1481, 2123, 2524
VspI ATTAAT 1 cut(s) 1311
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 6 cut(s) 723, 1127, 1418, 1466, 1500, 2744
XceI RCATGY 2 cut(s) 1383, 1770
XcmI CCANNNNNNNNNTGG 1 cut(s) 2546
XmiI GTMKAC 3 cut(s) 939, 1644, 2484
XmnI GAANNNNTTC 1 cut(s) 669
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 2759
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.