FvH4_1g13440

Membrane protein-like protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7384109 .. 7387282
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g13440.t1

Sequence Viewer

Length: 1437 bp
ATGGCTCGAATGATGATCACTCGAAAAACAGTATCAGCAGTAGCACTTATAGCATGGGTAGTGTTCATTAGCCTTCTTATGGTAAGTGAAGTTGTGAGTGGAGAAAGGCCACTAAAAGATGATCAGAAGCCGAGAAATTTTGTTGAAGAAGATATAAAGCAAGGAGCCTTTTTGAGAATGATGAAGCTTCTCTGGCAGACTGGAGGGTCTTCTTATCAACCTGTTTGGCCTGAGATGAAGTTTGGTTGGAAAATTATAGTGGGAACAATAGTTGGATTCTTTGGTGCTGCATTGGGTAGTGTTGGAGGTGTTGGTGGTGGAGGAATTTTTGTTCCAATGCTCGCGTTGATCATTGGTTTCGATCCCAAGTCTTCCACTGCCATTTCCAAGTGTATGATCATGGGAGCTGCAGGCTCAACAGTGTACTTCAATTTGAGACTTAGGCACCCCACACTGGACATGCCCCTTATAGATTATGATCTGGCTTTGCTCTTTCAGCCAATGCTTATGCTAGGAATCAGCATTGGAGTTGCCTTCAACGTTATGTTTGCCGATTGGATGGTCACAGTTCTACTCATTATTCTCTTCTTTGGGACAGCAGGAAAAGCTTTAATGAAAGGCATAGAAACATGGAAGAAAGAAACAATGATGAAGAAGGAAGCTGAAAGGCAGTTGGAATCGGAATCCAAACCCGGTGATGGTTCTGGAGAAGACTACAAACCATTACCTAGTGGTCCAATTTCATTGCAAGATGAACACGTACCTATCTCGCGCAACGTTCACTGGAAAGAGTTGTTATTGCTTGTGTATGTCTGGGTGGCTTTCCTCATTGTTCAGATTGTCAAGACATACACCGAGACTTGCTCCACCATGTTCTGGGTCCTGAATTCCATGCAGGTGCCAATTGCAGCCTCAGTTACAGTTTTTGAATCGATATGCTTGTGGAAAGGCACCAGGGTAATTGCATCAAAAGGAAAGGAAATCACAAACTGGAAGTTGCACCAGCTATTCCTTTACTGCAGCTGTGGGATCGTAGCTGGTATGGTTGGTGGACTACTTGGCCTCGGAGGTGGTTTCATCTTGGGACCCCTTTTTCTTGAACTTGGGATTCCTCCTCAGGTAGCAAGTGCTACATCAACCTTTGCTATGCTATTCTCATCCTCCATGTCAGTTGTACAATATTATCTTCTCAACCGTTTCCCAGTCCCATATGCTGCTTATTTTGTTTTGGTTGCAACAATTGCTGCCTTCACTGGTCAACATGTAGTGAGAAAGGTCATTGCAGTGGTTGGAAGAGCCTCCATTGTCATCTTCATACTAGCCTTGACGATTTTAGTCAGCGCAATCAGCTTAGGGGGAGTCGGAATAGCAAACATGGTTGAGAAGATGGAGAATCAAGAGTACATGGGGTTCGAAAATTTCTGTCACCAGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

52.4

Weight (kDa)

8.74

Isoelectric Point (pI)

29.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 90 - 200 2.4e-11 Sulfite exporter TauE/SafE
TauE PF01925 341 - 446 7.5e-14 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 886
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 886
AccB1I GGYRCC 3 cut(s) 444, 898, 950
AccB7I CCANNNNNTGG 1 cut(s) 876
AccII CGCG 2 cut(s) 344, 772
AclI AACGTT 2 cut(s) 540, 777
AclWI GGATC 2 cut(s) 356, 1037
AcsI RAATTY 4 cut(s) 136, 324, 886, 1417
AfaI GTAC 4 cut(s) 425, 762, 1176, 1403
AfiI CCNNNNNNNGG 4 cut(s) 79, 454, 698, 876
AflIII ACRYGT 2 cut(s) 757, 1261
AgsI TTSAA 5 cut(s) 146, 430, 538, 929, 1100
AjnI CCWGG 1 cut(s) 953
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
AluBI AGCT 8 cut(s) 187, 407, 608, 662, 1006, 1023, 1037, 1350
AluI AGCT 8 cut(s) 187, 407, 608, 662, 1006, 1023, 1037, 1350
Alw26I GTCTC 2 cut(s) 430, 851
AlwI GGATC 2 cut(s) 356, 1037
AoxI GGCC 3 cut(s) 107, 227, 1060
ApeKI GCWGC 6 cut(s) 287, 407, 908, 1020, 1214, 1244
ApoI RAATTY 4 cut(s) 136, 324, 886, 1417
AspLEI GCGC 2 cut(s) 774, 1343
AspS9I GGNCC 3 cut(s) 734, 880, 1085
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 2 cut(s) 707, 1418
AsuII TTCGAA 1 cut(s) 1413
AvaII GGWCC 3 cut(s) 734, 880, 1085
AxyI CCTNAGG 1 cut(s) 1116
BanI GGYRCC 3 cut(s) 444, 898, 950
BbsI GAAGAC 3 cut(s) 201, 363, 717
BbvI GCAGC 6 cut(s) 274, 394, 920, 1032, 1201, 1231
BccI CCATC 3 cut(s) 553, 692, 1381
BciT130I CCWGG 1 cut(s) 955
BclI TGATCA 4 cut(s) 15, 121, 348, 396
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 2 cut(s) 430, 851
BfaI CTAG 3 cut(s) 512, 729, 1319
BfmI CTRYAG 2 cut(s) 408, 1018
BfuAI ACCTGC 1 cut(s) 886
BisI GCNGC 6 cut(s) 288, 408, 909, 1021, 1215, 1245
BlsI GCNGC 6 cut(s) 289, 409, 910, 1022, 1216, 1246
Bme1390I CCNGG 2 cut(s) 693, 955
Bme18I GGWCC 3 cut(s) 734, 880, 1085
BmgT120I GGNCC 3 cut(s) 734, 880, 1085
BmiI GGNNCC 7 cut(s) 166, 446, 881, 900, 952, 1086, 1087
BmrFI CCNGG 2 cut(s) 693, 955
BmrI ACTGGG 1 cut(s) 1196
BmsI GCATC 1 cut(s) 974
BmuI ACTGGG 1 cut(s) 1196
BpiI GAAGAC 3 cut(s) 201, 363, 717
BplI GAGNNNNNCTC 2 cut(s) 848, 880
BpmI CTGGAG 2 cut(s) 222, 726
Bpu10I CCTNAGC 1 cut(s) 1351
Bpu14I TTCGAA 1 cut(s) 1413
BpuMI CCSGG 1 cut(s) 693
Bsa29I ATCGAT 1 cut(s) 932
BsaAI YACGTR 1 cut(s) 760
BsaBI GATNNNNATC 1 cut(s) 477
BsaJI CCNNGG 2 cut(s) 954, 1063
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 454, 698, 876
Bse1I ACTGG 7 cut(s) 205, 459, 788, 995, 1202, 1258, 1429
Bse21I CCTNAGG 1 cut(s) 1116
Bse3DI GCAATG 2 cut(s) 743, 1278
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 1 cut(s) 955
BseCI ATCGAT 1 cut(s) 932
BseDI CCNNGG 2 cut(s) 954, 1063
BseGI GGATG 2 cut(s) 564, 1157
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 4 cut(s) 79, 454, 698, 876
BseMI GCAATG 2 cut(s) 743, 1278
BseMII CTCAG 3 cut(s) 222, 927, 1130
BseNI ACTGG 7 cut(s) 205, 459, 788, 995, 1202, 1258, 1429
BseRI GAGGAG 1 cut(s) 1104
BseXI GCAGC 6 cut(s) 274, 394, 920, 1032, 1201, 1231
Bsh1236I CGCG 2 cut(s) 344, 772
BshFI GGCC 3 cut(s) 109, 229, 1062
BshNI GGYRCC 3 cut(s) 444, 898, 950
BshVI ATCGAT 1 cut(s) 932
BsiSI CCGG 1 cut(s) 693
BslFI GGGAC 3 cut(s) 607, 1098, 1190
BslI CCNNNNNNNGG 4 cut(s) 79, 454, 698, 876
BsmAI GTCTC 2 cut(s) 430, 851
BsmFI GGGAC 3 cut(s) 607, 1098, 1190
BsnI GGCC 3 cut(s) 109, 229, 1062
Bsp119I TTCGAA 1 cut(s) 1413
Bsp1407I TGTACA 1 cut(s) 1174
Bsp143I GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
BspANI GGCC 3 cut(s) 109, 229, 1062
BspCNI CTCAG 3 cut(s) 223, 926, 1129
BspDI ATCGAT 1 cut(s) 932
BspFNI CGCG 2 cut(s) 344, 772
BspLI GGNNCC 7 cut(s) 166, 446, 881, 900, 952, 1086, 1087
BspMAI CTGCAG 2 cut(s) 412, 1022
BspMI ACCTGC 1 cut(s) 886
BspPI GGATC 2 cut(s) 356, 1037
BspQI GCTCTTC 1 cut(s) 1288
BspT104I TTCGAA 1 cut(s) 1413
BspT107I GGYRCC 3 cut(s) 444, 898, 950
BsrDI GCAATG 2 cut(s) 743, 1278
BsrGI TGTACA 1 cut(s) 1174
BsrI ACTGG 7 cut(s) 205, 459, 788, 995, 1202, 1258, 1429
BssECI CCNNGG 2 cut(s) 954, 1063
BssMI GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
Bst2UI CCWGG 1 cut(s) 955
Bst4CI ACNGT 5 cut(s) 31, 421, 568, 922, 1196
Bst6I CTCTTC 2 cut(s) 590, 1288
BstAPI GCANNNNNTGC 1 cut(s) 1241
BstAUI TGTACA 1 cut(s) 1174
BstBAI YACGTR 1 cut(s) 760
BstBI TTCGAA 1 cut(s) 1413
BstC8I GCNNGC 2 cut(s) 342, 412
BstDEI CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
BstF5I GGATG 2 cut(s) 564, 1157
BstFNI CGCG 2 cut(s) 344, 772
BstHHI GCGC 2 cut(s) 774, 1343
BstKTI GATC 7 cut(s) 18, 124, 351, 364, 399, 481, 1032
BstMAI GTCTC 2 cut(s) 430, 851
BstMBI GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
BstMWI GCNNNNNNNGC 6 cut(s) 50, 193, 496, 605, 1241, 1347
BstNI CCWGG 1 cut(s) 955
BstNSI RCATGY 2 cut(s) 463, 1265
BstSCI CCNGG 2 cut(s) 691, 953
BstSFI CTRYAG 2 cut(s) 408, 1018
BstUI CGCG 2 cut(s) 344, 772
BstV1I GCAGC 6 cut(s) 274, 394, 920, 1032, 1201, 1231
BstV2I GAAGAC 3 cut(s) 201, 363, 717
Bsu15I ATCGAT 1 cut(s) 932
Bsu36I CCTNAGG 1 cut(s) 1116
BsuRI GGCC 3 cut(s) 109, 229, 1062
BsuTUI ATCGAT 1 cut(s) 932
BtsCI GGATG 2 cut(s) 564, 1157
BtsI GCAGTG 2 cut(s) 375, 1290
BtsIMutI CAGTG 6 cut(s) 375, 426, 452, 781, 1251, 1290
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 2 cut(s) 342, 412
CfoI GCGC 2 cut(s) 774, 1343
Cfr13I GGNCC 3 cut(s) 734, 880, 1085
ClaI ATCGAT 1 cut(s) 932
Csp6I GTAC 4 cut(s) 424, 761, 1175, 1402
CviQI GTAC 4 cut(s) 424, 761, 1175, 1402
DdeI CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
DpnI GATC 7 cut(s) 17, 123, 350, 363, 398, 480, 1031
DpnII GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 590, 1288
EarI CTCTTC 2 cut(s) 590, 1288
Eco47I GGWCC 3 cut(s) 734, 880, 1085
Eco81I CCTNAGG 1 cut(s) 1116
EcoO109I RGGNCCY 2 cut(s) 880, 1085
EcoRI GAATTC 1 cut(s) 886
EcoRII CCWGG 1 cut(s) 953
FaqI GGGAC 3 cut(s) 607, 1098, 1190
FauNDI CATATG 1 cut(s) 1210
FbaI TGATCA 4 cut(s) 15, 121, 348, 396
Fnu4HI GCNGC 6 cut(s) 288, 408, 909, 1021, 1215, 1245
FokI GGATG 2 cut(s) 571, 1144
Fsp4HI GCNGC 6 cut(s) 288, 408, 909, 1021, 1215, 1245
FspBI CTAG 3 cut(s) 512, 729, 1319
GlaI GCGC 2 cut(s) 773, 1342
GluI GCNGC 6 cut(s) 288, 408, 909, 1021, 1215, 1245
GsuI CTGGAG 2 cut(s) 222, 726
HaeIII GGCC 3 cut(s) 109, 229, 1062
HapII CCGG 1 cut(s) 693
HhaI GCGC 2 cut(s) 774, 1343
Hin6I GCGC 2 cut(s) 772, 1341
HinP1I GCGC 2 cut(s) 772, 1341
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HindIII AAGCTT 2 cut(s) 185, 606
HinfI GANTC 8 cut(s) 276, 516, 677, 683, 929, 1108, 1359, 1393
HpaII CCGG 1 cut(s) 693
HphI GGTGA 2 cut(s) 707, 1418
Hpy166II GTNNAC 4 cut(s) 424, 781, 1052, 1259
Hpy188I TCNGA 5 cut(s) 126, 682, 837, 1067, 1364
Hpy188III TCNNGA 5 cut(s) 705, 844, 883, 1097, 1397
Hpy8I GTNNAC 4 cut(s) 424, 781, 1052, 1259
HpyAV CCTTC 4 cut(s) 83, 544, 649, 1258
HpyCH4III ACNGT 5 cut(s) 31, 421, 568, 922, 1196
HpyCH4IV ACGT 3 cut(s) 540, 759, 777
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 193, 496, 605, 1241, 1347
HpyF3I CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
HpySE526I ACGT 3 cut(s) 540, 759, 777
HspAI GCGC 2 cut(s) 772, 1341
KflI GGGWCCC 1 cut(s) 1085
Ksp22I TGATCA 4 cut(s) 15, 121, 348, 396
Kzo9I GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 3 cut(s) 164, 404, 869
Lsp1109I GCAGC 6 cut(s) 274, 394, 920, 1032, 1201, 1231
LweI GCATC 1 cut(s) 974
MaeI CTAG 3 cut(s) 512, 729, 1319
MaeII ACGT 3 cut(s) 540, 759, 777
MaeIII GTNAC 3 cut(s) 562, 916, 1424
MalI GATC 7 cut(s) 17, 123, 350, 363, 398, 480, 1031
MboI GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
MfeI CAATTG 2 cut(s) 903, 1239
MlyI GAGTC 1 cut(s) 1368
MmeI TCCRAC 6 cut(s) 227, 253, 283, 654, 1270, 1342
MseI TTAA 2 cut(s) 611, 1435
MslI CAYNNNNRTG 2 cut(s) 896, 1283
MspA1I CMGCKG 1 cut(s) 1023
MspI CCGG 1 cut(s) 693
MspR9I CCNGG 2 cut(s) 693, 955
MunI CAATTG 2 cut(s) 903, 1239
MvaI CCWGG 1 cut(s) 955
MvnI CGCG 2 cut(s) 344, 772
MwoI GCNNNNNNNGC 6 cut(s) 50, 193, 496, 605, 1241, 1347
NciI CCSGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 1210
NdeII GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
NlaIV GGNNCC 7 cut(s) 166, 446, 881, 900, 952, 1086, 1087
NmeAIII GCCGAG 1 cut(s) 156
NmuCI GTSAC 2 cut(s) 562, 1424
NspI RCATGY 2 cut(s) 463, 1265
NspV TTCGAA 1 cut(s) 1413
PaqCI CACCTGC 1 cut(s) 886
PciI ACATGT 1 cut(s) 1261
PciSI GCTCTTC 1 cut(s) 1288
PfeI GAWTC 7 cut(s) 276, 516, 677, 683, 929, 1108, 1393
PflMI CCANNNNNTGG 1 cut(s) 876
PkrI GCNGC 6 cut(s) 289, 409, 910, 1022, 1216, 1246
PleI GAGTC 1 cut(s) 1367
PpsI GAGTC 1 cut(s) 1367
Ppu21I YACGTR 1 cut(s) 760
PpuMI RGGWCCY 2 cut(s) 880, 1085
PscI ACATGT 1 cut(s) 1261
Psp1406I AACGTT 2 cut(s) 540, 777
Psp5II RGGWCCY 2 cut(s) 880, 1085
Psp6I CCWGG 1 cut(s) 953
PspGI CCWGG 1 cut(s) 953
PspN4I GGNNCC 7 cut(s) 166, 446, 881, 900, 952, 1086, 1087
PspPI GGNCC 3 cut(s) 734, 880, 1085
PspPPI RGGWCCY 2 cut(s) 880, 1085
PsrI GAACNNNNNNTAC 2 cut(s) 1394, 1426
PstI CTGCAG 2 cut(s) 412, 1022
PvuII CAGCTG 1 cut(s) 1023
RsaI GTAC 4 cut(s) 425, 762, 1176, 1403
RsaNI GTAC 4 cut(s) 424, 761, 1175, 1402
RseI CAYNNNNRTG 2 cut(s) 896, 1283
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 2 cut(s) 611, 1435
SatI GCNGC 6 cut(s) 288, 408, 909, 1021, 1215, 1245
Sau3AI GATC 7 cut(s) 15, 121, 348, 361, 396, 478, 1029
Sau96I GGNCC 3 cut(s) 734, 880, 1085
SchI GAGTC 1 cut(s) 1368
ScrFI CCNGG 2 cut(s) 693, 955
SfaNI GCATC 1 cut(s) 974
SfcI CTRYAG 2 cut(s) 408, 1018
SfuI TTCGAA 1 cut(s) 1413
SinI GGWCC 3 cut(s) 734, 880, 1085
SmiMI CAYNNNNRTG 2 cut(s) 896, 1283
SspI AATATT 1 cut(s) 1181
SspMI CTAG 3 cut(s) 512, 729, 1319
StyD4I CCNGG 2 cut(s) 691, 953
TaaI ACNGT 5 cut(s) 31, 421, 568, 922, 1196
TaiI ACGT 3 cut(s) 543, 762, 780
TaqI TCGA 5 cut(s) 7, 22, 360, 932, 1413
TatI WGTACW 3 cut(s) 423, 1174, 1401
TfiI GAWTC 7 cut(s) 276, 516, 677, 683, 929, 1108, 1393
Tru1I TTAA 2 cut(s) 611, 1435
Tru9I TTAA 2 cut(s) 611, 1435
TscAI CASTG 6 cut(s) 382, 426, 459, 788, 1258, 1290
TseFI GTSAC 2 cut(s) 562, 1424
TseI GCWGC 6 cut(s) 287, 407, 908, 1020, 1214, 1244
Tsp45I GTSAC 2 cut(s) 562, 1424
TspDTI ATGAA 9 cut(s) 55, 197, 251, 629, 665, 732, 768, 1066, 1303
TspRI CASTG 6 cut(s) 382, 426, 459, 788, 1258, 1290
Van91I CCANNNNNTGG 1 cut(s) 876
VpaK11BI GGWCC 3 cut(s) 734, 880, 1085
XapI RAATTY 4 cut(s) 136, 324, 886, 1417
XceI RCATGY 2 cut(s) 463, 1265
XspI CTAG 3 cut(s) 512, 729, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.