Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003343

Physical Location & Seq

Genomic Coordinates Reverse (-)

12317148 .. 12320639

Gene Structure 3492 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1149600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGCTCGAAACATGTTCACTCAGAGGGCAGTAAAAATGTCAGCAGGAGCAGCAGCATTAGCAATAGCATGGGCAGTATTCACTGAAGTTGCCAGTGCAGAAAGGCCTCTGAAAGATGAGATCATCAAGCCGAAAATTTTTGTTGAGCAAGAAGCAATTTTTGCTAGAGTCATTAATTTTCTATGGCAGGCTGGAGGCTCTTCTTATCAGCCTGTTTGGCCTGAGATGAAGTTTGGTTGGAAAATTGTAGTAGGTTCGGTAGTTGGATTCTTTGGTGCTGCATTGGGTAGTGTTGGCGGTGTTGGTGGTGGAGGAATTTTTGTTCCGATGCTCGCCTTGATTGTTGGCTTCGACCCCAAGTCTTCCACCGCGATTTCCAAGTGTATGATTATGGGAGCTGCAGGATCAACAGTATACTTTAATTTGAGGCTTAGGCACCCAACATTGGACATGCCCCTCATAGATTATGATCTGGCGTTGCTCTTTCAGCCCATGCTCATGCTAGGGATCAGCATCGGAGTTGCCTTCAACGTCGTGTTTGCTGATTGGATGGTCACAGTTCTACTTATCATCCTCTTCTTAGGTACAGCAGCAAAAGCTTTGATGAAAGGCGTGGAAACATGGAAGAAGGAAACAATGATGAAGAAGGAAGCGGAAAATATGTTAGAGTCGGAGACCAAACAGGATGAGGGTTCTGGGGAAGACTACAAACCGCTACCTAGCGGTCCAGCTTCATCACAAGATGAGGAGGTACCAATAACGCGAAACATTTACTGGAAAGAGTTATCGTTGCTCATGTATGTCTGGGTGGCTTTTCTTATTGTCCAGATTGTTAAGACATATACCGAAACTTGCTCCACCACGTTCTGGATCATGAACTCATTGCAGGTACCAATTGCACTTTCTGTAACGCTCTTCGAAGCCATATGCTTACGCAAAGGCACCAGAGTGATTGCATCAAAAGGAAAGGAAATCACAAACTGGAAGTTGCATCAGATTTTTCTCTACTGCAGCTGTGGAATTGTAGCTGGTATGGTCGGTGGACTACTTGGCTTGGGAGGCGGTTTCATCTTGGGACCCCTTTTTCTTGAATTGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCCACCTTTGCAATGCTATTCTCATCCTCCATGTCAGTTGTACAGTACTACCTTCTCAACCGTTTCCCAGTCCCCTATGCTGCTTATTTCGTGGTGGTTGCAACAATTGCTGCATTTACTGGTCAGCATGTAGTGAGAAAGATCATTGCAGTCCTTGGCAGAGCATCCATCATCATCTTCATTCTAGCTTTGACAATCTTTGTCAGCGCAATCAGCTTAGGCGGGGTGGGCATAGCAAACATGGTTGAGAAGATGGAGAATCGAGAGTACATGGGATTTGAAAATTTCTGTGTCCCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TauE

Protein Analysis

476

Amino Acids

51.77

Weight (kDa)

8.39

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TauE	PF01925	87 - 200	8e-11	Sulfite exporter TauE/SafE
TauE	PF01925	338 - 443	5.3e-14	Sulfite exporter TauE/SafE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003343)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66750
fragaria_vesca	FvH4_1g13430 FvH4_1g13430 FvH4_1g13430 FvH4_1g13440 FvH4_1g13440
malus_domestica	MD02G1149400.v1.1 MD02G1149600.v1.1 MD15G1264100.v1.1 MD15G1264200.v1.1
prunus_persica	Prupe.3G299700_v2.0.a1 Prupe.7G153300_v2.0.a1 Prupe.7G153400_v2.0.a1 Prupe.7G153400_v2.0.a1
pyrus_communis	pycom02g11750 pycom02g11770 pycom15g22990
rosa_chinensis	RchiOBHm_Chr2g0101811 RchiOBHm_Chr2g0101821
rosa_laevigata	RLG00000017102 RLG00000017103
rosa_multiflora	Rmu_co8045018.1_g000001 Rmu_sc0000838.1_g000003
rosa_roxburghii	Rroxscaffold_2G00141020
rosa_rugosa	Rorug02G0102000 Rorug07G0333200
rosa_samantha	Rh2AG149400 Rh2AG149500 Rh2BG155000 Rh2BG155100 Rh2CG155400 Rh2CG155500 Rh2DG155200 Rh2DG155300
rosa_wichuraiana	Rw2G011690 Rw2G011700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	877
Acc65I	GGTACC	2 cut(s)	751, 889
AccB1I	GGYRCC	4 cut(s)	435, 751, 889, 941
AccB7I	CCANNNNNTGG	1 cut(s)	867
AccI	GTMKAC	1 cut(s)	414
AccII	CGCG	2 cut(s)	371, 763
AciI	CCGC	7 cut(s)	297, 369, 653, 713, 723, 1062, 1347
AclWI	GGATC	3 cut(s)	412, 515, 878
AcsI	RAATTY	4 cut(s)	135, 315, 1098, 1408
AcuI	CTGAAG	1 cut(s)	105
AfaI	GTAC	6 cut(s)	586, 753, 891, 1167, 1172, 1394
AfiI	CCNNNNNNNGG	2 cut(s)	445, 867
AflIII	ACRYGT	1 cut(s)	12
AgsI	TTSAA	3 cut(s)	529, 1091, 1406
AhdI	GACNNNNNGTC	1 cut(s)	358
AjuI	GAANNNNNNNTTGG	2 cut(s)	886, 918
AleI	CACNNNNGTG	1 cut(s)	947
AloI	GAACNNNNNNTCC	2 cut(s)	306, 338
AluBI	AGCT	7 cut(s)	398, 599, 731, 1014, 1028, 1313, 1341
AluI	AGCT	7 cut(s)	398, 599, 731, 1014, 1028, 1313, 1341
Alw26I	GTCTC	1 cut(s)	668
AlwI	GGATC	3 cut(s)	412, 515, 878
AoxI	GGCC	2 cut(s)	104, 218
ApeKI	GCWGC	8 cut(s)	50, 53, 278, 398, 590, 1011, 1205, 1235
ApoI	RAATTY	4 cut(s)	135, 315, 1098, 1408
AseI	ATTAAT	1 cut(s)	174
Asp718I	GGTACC	2 cut(s)	751, 889
AspLEI	GCGC	1 cut(s)	1334
AspS9I	GGNCC	2 cut(s)	725, 1076
AsuII	TTCGAA	1 cut(s)	918
AvaII	GGWCC	2 cut(s)	725, 1076
AxyI	CCTNAGG	1 cut(s)	1107
BanI	GGYRCC	4 cut(s)	435, 751, 889, 941
BbsI	GAAGAC	2 cut(s)	354, 708
BbvI	GCAGC	8 cut(s)	62, 65, 265, 385, 602, 1023, 1192, 1222
BccI	CCATC	3 cut(s)	544, 1301, 1372
BcoDI	GTCTC	1 cut(s)	668
BfaI	CTAG	4 cut(s)	165, 503, 720, 1310
BfmI	CTRYAG	2 cut(s)	399, 1009
BfuAI	ACCTGC	1 cut(s)	877
BglI	GCCNNNNNGGC	1 cut(s)	217
BisI	GCNGC	8 cut(s)	51, 54, 279, 399, 591, 1012, 1206, 1236
BlsI	GCNGC	8 cut(s)	52, 55, 280, 400, 592, 1013, 1207, 1237
BmcAI	AGTACT	1 cut(s)	1172
Bme18I	GGWCC	2 cut(s)	725, 1076
BmeRI	GACNNNNNGTC	1 cut(s)	358
BmgT120I	GGNCC	2 cut(s)	725, 1076
BmiI	GGNNCC	6 cut(s)	437, 753, 891, 943, 1077, 1078
BmrI	ACTGGG	1 cut(s)	1187
BmsI	GCATC	5 cut(s)	318, 522, 965, 1000, 1298
BmuI	ACTGGG	1 cut(s)	1187
BpiI	GAAGAC	2 cut(s)	354, 708
BpmI	CTGGAG	1 cut(s)	213
Bpu10I	CCTNAGC	2 cut(s)	431, 1342
Bpu14I	TTCGAA	1 cut(s)	918
BsaBI	GATNNNNATC	2 cut(s)	468, 512
BsaI	GGTCTC	1 cut(s)	668
BsaJI	CCNNGG	1 cut(s)	1279
Bsc4I	CCNNNNNNNGG	2 cut(s)	445, 867
Bse1I	ACTGG	5 cut(s)	93, 779, 986, 1193, 1249
Bse21I	CCTNAGG	1 cut(s)	1107
Bse3DI	GCAATG	3 cut(s)	881, 1143, 1269
Bse8I	GATNNNNATC	2 cut(s)	468, 512
BseDI	CCNNGG	1 cut(s)	1279
BseGI	GGATG	6 cut(s)	555, 570, 691, 1124, 1148, 1289
BseJI	GATNNNNATC	2 cut(s)	468, 512
BseLI	CCNNNNNNNGG	2 cut(s)	445, 867
BseMI	GCAATG	3 cut(s)	881, 1143, 1269
BseMII	CTCAG	3 cut(s)	35, 213, 1121
BseNI	ACTGG	5 cut(s)	93, 779, 986, 1193, 1249
BseRI	GAGGAG	2 cut(s)	761, 1095
BseXI	GCAGC	8 cut(s)	62, 65, 265, 385, 602, 1023, 1192, 1222
BsgI	GTGCAG	1 cut(s)	117
Bsh1236I	CGCG	2 cut(s)	371, 763
BshFI	GGCC	2 cut(s)	106, 220
BshNI	GGYRCC	4 cut(s)	435, 751, 889, 941
BslFI	GGGAC	3 cut(s)	1089, 1181, 1403
BslI	CCNNNNNNNGG	2 cut(s)	445, 867
BsmAI	GTCTC	1 cut(s)	668
BsmFI	GGGAC	3 cut(s)	1089, 1181, 1403
BsnI	GGCC	2 cut(s)	106, 220
Bso31I	GGTCTC	1 cut(s)	668
Bsp119I	TTCGAA	1 cut(s)	918
Bsp1407I	TGTACA	1 cut(s)	1165
Bsp143I	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
BspACI	CCGC	7 cut(s)	297, 369, 653, 713, 723, 1062, 1347
BspANI	GGCC	2 cut(s)	106, 220
BspCNI	CTCAG	3 cut(s)	34, 214, 1120
BspFNI	CGCG	2 cut(s)	371, 763
BspHI	TCATGA	1 cut(s)	873
BspLI	GGNNCC	6 cut(s)	437, 753, 891, 943, 1077, 1078
BspMAI	CTGCAG	2 cut(s)	403, 1013
BspMI	ACCTGC	1 cut(s)	877
BspPI	GGATC	3 cut(s)	412, 515, 878
BspQI	GCTCTTC	2 cut(s)	205, 920
BspT104I	TTCGAA	1 cut(s)	918
BspT107I	GGYRCC	4 cut(s)	435, 751, 889, 941
BspTNI	GGTCTC	1 cut(s)	668
BsrDI	GCAATG	3 cut(s)	881, 1143, 1269
BsrGI	TGTACA	1 cut(s)	1165
BsrI	ACTGG	5 cut(s)	93, 779, 986, 1193, 1249
BssECI	CCNNGG	1 cut(s)	1279
BssMI	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
BssNAI	GTATAC	1 cut(s)	415
BssT1I	CCWWGG	1 cut(s)	1279
Bst1107I	GTATAC	1 cut(s)	415
Bst4CI	ACNGT	4 cut(s)	412, 559, 1170, 1187
Bst6I	CTCTTC	3 cut(s)	205, 581, 920
BstAPI	GCANNNNNTGC	2 cut(s)	161, 1232
BstAUI	TGTACA	1 cut(s)	1165
BstBI	TTCGAA	1 cut(s)	918
BstC8I	GCNNGC	2 cut(s)	189, 333
BstDEI	CTNAG	6 cut(s)	21, 222, 431, 580, 1107, 1342
BstF5I	GGATG	6 cut(s)	555, 570, 691, 1124, 1148, 1289
BstFNI	CGCG	2 cut(s)	371, 763
BstHHI	GCGC	1 cut(s)	1334
BstKTI	GATC	6 cut(s)	123, 407, 472, 510, 873, 1269
BstMAI	GTCTC	1 cut(s)	668
BstMBI	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
BstNSI	RCATGY	3 cut(s)	16, 454, 1256
BstSFI	CTRYAG	2 cut(s)	399, 1009
BstUI	CGCG	2 cut(s)	371, 763
BstV1I	GCAGC	8 cut(s)	62, 65, 265, 385, 602, 1023, 1192, 1222
BstV2I	GAAGAC	2 cut(s)	354, 708
BstZ17I	GTATAC	1 cut(s)	415
Bsu36I	CCTNAGG	1 cut(s)	1107
BsuRI	GGCC	2 cut(s)	106, 220
BtsCI	GGATG	6 cut(s)	555, 570, 691, 1124, 1148, 1289
BtsIMutI	CAGTG	2 cut(s)	81, 100
BveI	ACCTGC	1 cut(s)	877
Cac8I	GCNNGC	2 cut(s)	189, 333
CciI	TCATGA	1 cut(s)	873
CfoI	GCGC	1 cut(s)	1334
Cfr13I	GGNCC	2 cut(s)	725, 1076
Csp6I	GTAC	6 cut(s)	585, 752, 890, 1166, 1171, 1393
CviQI	GTAC	6 cut(s)	585, 752, 890, 1166, 1171, 1393
DdeI	CTNAG	6 cut(s)	21, 222, 431, 580, 1107, 1342
DpnI	GATC	6 cut(s)	122, 406, 471, 509, 872, 1268
DpnII	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
DriI	GACNNNNNGTC	1 cut(s)	358
Eam1104I	CTCTTC	3 cut(s)	205, 581, 920
Eam1105I	GACNNNNNGTC	1 cut(s)	358
EarI	CTCTTC	3 cut(s)	205, 581, 920
Eco130I	CCWWGG	1 cut(s)	1279
Eco147I	AGGCCT	1 cut(s)	106
Eco31I	GGTCTC	1 cut(s)	668
Eco47I	GGWCC	2 cut(s)	725, 1076
Eco57I	CTGAAG	1 cut(s)	105
Eco81I	CCTNAGG	1 cut(s)	1107
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoRI	GAATTC	1 cut(s)	1098
EcoT14I	CCWWGG	1 cut(s)	1279
ErhI	CCWWGG	1 cut(s)	1279
FaqI	GGGAC	3 cut(s)	1089, 1181, 1403
FauI	CCCGC	1 cut(s)	1340
FauNDI	CATATG	1 cut(s)	926
FblI	GTMKAC	1 cut(s)	414
Fnu4HI	GCNGC	8 cut(s)	51, 54, 279, 399, 591, 1012, 1206, 1236
FokI	GGATG	6 cut(s)	557, 562, 698, 1111, 1135, 1276
Fsp4HI	GCNGC	8 cut(s)	51, 54, 279, 399, 591, 1012, 1206, 1236
FspBI	CTAG	4 cut(s)	165, 503, 720, 1310
GlaI	GCGC	1 cut(s)	1333
GluI	GCNGC	8 cut(s)	51, 54, 279, 399, 591, 1012, 1206, 1236
GsuI	CTGGAG	1 cut(s)	213
HaeIII	GGCC	2 cut(s)	106, 220
HhaI	GCGC	1 cut(s)	1334
Hin6I	GCGC	1 cut(s)	1332
HinP1I	GCGC	1 cut(s)	1332
HindIII	AAGCTT	1 cut(s)	597
HinfI	GANTC	4 cut(s)	168, 267, 668, 1384
Hpy166II	GTNNAC	3 cut(s)	18, 415, 1043
Hpy188I	TCNGA	6 cut(s)	24, 111, 327, 518, 673, 996
Hpy188III	TCNNGA	5 cut(s)	826, 868, 874, 1088, 1388
Hpy8I	GTNNAC	3 cut(s)	18, 415, 1043
Hpy99I	CGWCG	1 cut(s)	536
HpyAV	CCTTC	4 cut(s)	535, 622, 640, 1187
HpyCH4III	ACNGT	4 cut(s)	412, 559, 1170, 1187
HpyCH4IV	ACGT	2 cut(s)	531, 863
HpyF3I	CTNAG	6 cut(s)	21, 222, 431, 580, 1107, 1342
HpySE526I	ACGT	2 cut(s)	531, 863
HspAI	GCGC	1 cut(s)	1332
KflI	GGGWCCC	1 cut(s)	1076
KpnI	GGTACC	2 cut(s)	755, 893
Kzo9I	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
LguI	GCTCTTC	2 cut(s)	205, 920
LmnI	GCTCC	3 cut(s)	47, 395, 860
Lsp1109I	GCAGC	8 cut(s)	62, 65, 265, 385, 602, 1023, 1192, 1222
LweI	GCATC	5 cut(s)	318, 522, 965, 1000, 1298
MaeI	CTAG	4 cut(s)	165, 503, 720, 1310
MaeII	ACGT	2 cut(s)	531, 863
MaeIII	GTNAC	2 cut(s)	553, 907
MalI	GATC	6 cut(s)	122, 406, 471, 509, 872, 1268
MboI	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
MboII	GAAGA	9 cut(s)	192, 354, 568, 637, 655, 713, 907, 1294, 1387
MfeI	CAATTG	2 cut(s)	894, 1230
MlyI	GAGTC	2 cut(s)	177, 677
MmeI	TCCRAC	3 cut(s)	218, 244, 651
MseI	TTAA	4 cut(s)	174, 420, 834, 1426
MslI	CAYNNNNRTG	2 cut(s)	497, 947
MspA1I	CMGCKG	1 cut(s)	1014
MunI	CAATTG	2 cut(s)	894, 1230
MvnI	CGCG	2 cut(s)	371, 763
NdeI	CATATG	1 cut(s)	926
NdeII	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
NlaIV	GGNNCC	6 cut(s)	437, 753, 891, 943, 1077, 1078
NmuCI	GTSAC	1 cut(s)	553
NspI	RCATGY	3 cut(s)	16, 454, 1256
NspV	TTCGAA	1 cut(s)	918
OliI	CACNNNNGTG	1 cut(s)	947
PagI	TCATGA	1 cut(s)	873
PceI	AGGCCT	1 cut(s)	106
PciI	ACATGT	1 cut(s)	12
PciSI	GCTCTTC	2 cut(s)	205, 920
PfeI	GAWTC	2 cut(s)	267, 1384
PflMI	CCANNNNNTGG	1 cut(s)	867
PkrI	GCNGC	8 cut(s)	52, 55, 280, 400, 592, 1013, 1207, 1237
PleI	GAGTC	2 cut(s)	176, 676
PpsI	GAGTC	2 cut(s)	176, 676
PpuMI	RGGWCCY	1 cut(s)	1076
PscI	ACATGT	1 cut(s)	12
PshBI	ATTAAT	1 cut(s)	174
Psp5II	RGGWCCY	1 cut(s)	1076
PspN4I	GGNNCC	6 cut(s)	437, 753, 891, 943, 1077, 1078
PspPI	GGNCC	2 cut(s)	725, 1076
PspPPI	RGGWCCY	1 cut(s)	1076
PstI	CTGCAG	2 cut(s)	403, 1013
PvuII	CAGCTG	1 cut(s)	1014
RsaI	GTAC	6 cut(s)	586, 753, 891, 1167, 1172, 1394
RsaNI	GTAC	6 cut(s)	585, 752, 890, 1166, 1171, 1393
RseI	CAYNNNNRTG	2 cut(s)	497, 947
SapI	GCTCTTC	2 cut(s)	205, 920
SaqAI	TTAA	4 cut(s)	174, 420, 834, 1426
SatI	GCNGC	8 cut(s)	51, 54, 279, 399, 591, 1012, 1206, 1236
Sau3AI	GATC	6 cut(s)	120, 404, 469, 507, 870, 1266
Sau96I	GGNCC	2 cut(s)	725, 1076
ScaI	AGTACT	1 cut(s)	1172
SchI	GAGTC	2 cut(s)	177, 677
SfaNI	GCATC	5 cut(s)	318, 522, 965, 1000, 1298
SfcI	CTRYAG	2 cut(s)	399, 1009
SfuI	TTCGAA	1 cut(s)	918
SinI	GGWCC	2 cut(s)	725, 1076
SmiMI	CAYNNNNRTG	2 cut(s)	497, 947
SseBI	AGGCCT	1 cut(s)	106
SsiI	CCGC	7 cut(s)	297, 369, 653, 713, 723, 1062, 1347
SspMI	CTAG	4 cut(s)	165, 503, 720, 1310
StuI	AGGCCT	1 cut(s)	106
StyI	CCWWGG	1 cut(s)	1279
TaaI	ACNGT	4 cut(s)	412, 559, 1170, 1187
TaiI	ACGT	2 cut(s)	534, 866
TaqI	TCGA	4 cut(s)	7, 351, 918, 1387
TatI	WGTACW	3 cut(s)	1165, 1170, 1392
TfiI	GAWTC	2 cut(s)	267, 1384
Tru1I	TTAA	4 cut(s)	174, 420, 834, 1426
Tru9I	TTAA	4 cut(s)	174, 420, 834, 1426
TscAI	CASTG	2 cut(s)	88, 100
TseFI	GTSAC	1 cut(s)	553
TseI	GCWGC	8 cut(s)	50, 53, 278, 398, 590, 1011, 1205, 1235
Tsp45I	GTSAC	1 cut(s)	553
TspDTI	ATGAA	7 cut(s)	242, 620, 656, 723, 890, 1057, 1294
TspRI	CASTG	2 cut(s)	88, 100
Van91I	CCANNNNNTGG	1 cut(s)	867
VpaK11BI	GGWCC	2 cut(s)	725, 1076
VspI	ATTAAT	1 cut(s)	174
XapI	RAATTY	4 cut(s)	135, 315, 1098, 1408
XceI	RCATGY	3 cut(s)	16, 454, 1256
XmiI	GTMKAC	1 cut(s)	414
XspI	CTAG	4 cut(s)	165, 503, 720, 1310
ZrmI	AGTACT	1 cut(s)	1172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.