Rw2G011690

ATP-dependent DNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0003343
Physical Location & Seq
Reverse (-)
11781006 .. 11787815
6810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G011690.1

Sequence Viewer

Length: 2247 bp
ATGTTCAAAAAAAGGAAGATTCTTTTAATAAGAGATCTTTATCAACATGTTTTTGAAATGGCGACGAAGGCCGAGCCGTCGGCGGAGTCTCCGACTTCGGTTCTCAAGGAAGAGGATGTATGTGGGGAGATTGATGTCAAATTAGAGGAGATTGATGTCAAATTAGAGAAGGAGGAGGAGAAGCTCCTCGAAGCTCGGGTTAAGGAAGAGGAGGCAGAAACAGAAAAGGAGCCGCCCCACTTGAATGACACTCAGTTTAGCAAGTTGGATGAGCTTCTAACAAAGACTCAGCTTTACTCCGATTTTTTGCTCGAGAAAATGGATGACATCACACTTGATGTTCCCGAGCAGCCGTGTGAACCTGTTGAGAAAAAGAGAGGCCGTGGTTTCAAAAGAAAGGCTACTTACAATAATACAAAGGCCAAGAGGGCAGTTGCAGCTATGCTTACAAGGTCTAAAGAGGGTGAGAAAATTGAAGATGTGAACCTAACCGAGGAAGAAAGAGTTGAGAAACAGCAAAAGGAACTTGTACCTCTACTGACTGGTGGAAAATTGAAGTCTTATCAACTCAAAGGTGTAAAGTGGTTGATCTCTTTATGGCAAAATGGGTTGAATGGGATCCTTGCAGACCAAATGGGACTTGGAAAGACTATCCAAACCATAGGTTTTCTTTCTCATCTTAAATCTATGGGACTGGATGGGCCATACTTGGTGATTGCACCTCTTTCTACCCTTTCCAACTGGATTAATGAAATTTCAAGGTTTACGCCTTCAATGAAGGCTATAATCTATCATGGTAACAAGAAAGAAAGGGATGACATACGAAGGAAGCACATGCCCAAATCAGTTGGCCCTAACTTCCCAATAATTGTTACCTCATATGAAGTTGCGTTGGCTGATGCAAGAAAATGTTTAAGGCACTACAACTGGAAATATCTTGTGGTTGATGAAGGACACAGATTGAAAAACTCCAAGTGCAAATTAGTGCAGCAGTTGAAGTACATACCTGTAGAGAATAAGATTCTGTTGACTGGAACACCTCTGCAGAATAATTTGGCTGAGCTTTGGTCATTGTTGAACTTTATTTTGCCGGATATATTCTCATCCCATGAAGAATTTGAGTCATGGTTTGACCTAGGAGGAAAGTGCAATAGTGAAGCAATGAAGGAAGAATTGGAAGAGAAGAGAAGGGCTCAAGTGCTACCGAAACTCCATGCCATACTGCGTCCCTTTCTTCTCCGAAGAATGAAGATAGATGTTGAGCTGATGCTTCCTAGGAAAAAGGAAATCATATTATATGCAACCATGACAGAGCATCAAAAGAAGTTTCAGGAACATCTGATCAATAAGACACTGGAGAAACATCTAATGCTTGAAAATGGAAGCCATGTAAATGGCCTGAAAGGGAAGCTTAACAATTTGATGATCCAACTTCGGAAGAACTGCAATCATCCTGACCTTTTAGAGTCGGCATTTGATGGATCATATTTCTACCCCCCTGTTGACCAGATAGTTGAGCAATGTGGGAAATTTAGCTTGCTTGAACGACTGTTGAAGCGGCTGCTTGCCTGCAAACACAAGGTTCTGATATTCTCACAGTGGACTAAGATTTTGGATATAATGGATTACTATTTTAGCGAAAAAGGATTTGAAGTTTGTAGAATCGATGGCAATGTGAAACTAGATGAGCGGAGAAGACAGATTGCTTCTTTCAATGATTTAGACAGCACTTGTAGAATATTCCTTCTGAGCACTAGAGCTGGTGGACTGGGTATCAACCTTACTGCAGCTGATACTTGTATACTGTATGACAGTGATTGGAACCCTCAAATGGATTTGCAAGCCATGGATAGATGTCACAGGATTGGGCAAACCAAGCCGGTTCATGTTTACCGGTTGGCAACAGCACAATCTGTGGAGGGTCGGATGTTGAAAAGAGCTTTTAGTAAGTTGAAGCTTGAACATGTAGTCATTGGAAAAGGAAAGTTCCATCAGGAAAGAGCCAAGCCTGAGGCAGAATTCTTGGAGGAAGAGGATCTCATAGCAGTTCTCCGAGAAGAAGAATCTGCTGAGGACAAGATGATACAGACAGAAATCAGTGACGAAGAACTGGAGAAGGTCTTGGATCGCAGTGATCTCGTGGGGACTCCTACTGATGCTGCTGCTGCACTTCCCCTAAAGGGGCCTGGCTGGGAAGTGGTGGTTCCTACCGCTGGTGGGGGCATGCTCTCCACCCTTAATAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000786 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006342 GO:0006344 GO:0006346 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016043 GO:0016458 GO:0016462 GO:0016569 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031056 GO:0031057 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031401 GO:0032196 GO:0032197 GO:0032268 GO:0032269 GO:0032270 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0035065 GO:0035067 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044030 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044764 GO:0044815 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0060255 GO:0065007 GO:0070035 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090239 GO:0090241 GO:0090304 GO:0140097 GO:1901360 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1905269 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

748

Amino Acids

85.8

Weight (kDa)

6.71

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 184 - 347 1.3e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 188 - 487 1.1e-81 SNF2-related domain
DEAD PF00270 202 - 350 3.7e-06 DEAD/DEAH box helicase
Helicase_C PF00271 510 - 623 1.7e-26 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1690
AccI GTMKAC 1 cut(s) 1801
AciI CCGC 5 cut(s) 83, 233, 1558, 1690, 2211
AclWI GGATC 6 cut(s) 613, 626, 1420, 1489, 2043, 2133
AcsI RAATTY 4 cut(s) 753, 1115, 1529, 2018
AfaI GTAC 2 cut(s) 531, 1001
AfiI CCNNNNNNNGG 6 cut(s) 493, 1831, 2180, 2181, 2213, 2217
AflIII ACRYGT 2 cut(s) 46, 1963
AgeI ACCGGT 1 cut(s) 1893
AjnI CCWGG 1 cut(s) 2185
AjuI GAANNNNNNNTTGG 2 cut(s) 1157, 1189
Alw21I GWGCWC 1 cut(s) 1754
Alw26I GTCTC 1 cut(s) 93
AlwI GGATC 6 cut(s) 613, 626, 1420, 1489, 2043, 2133
Ama87I CYCGRG 3 cut(s) 195, 311, 344
AoxI GGCC 7 cut(s) 69, 379, 420, 701, 850, 1396, 2183
ApeKI GCWGC 8 cut(s) 349, 437, 988, 1561, 1787, 2159, 2162, 2165
ApoI RAATTY 4 cut(s) 753, 1115, 1529, 2018
ArsI GACNNNNNNTTYG 2 cut(s) 1594, 1626
AseI ATTAAT 1 cut(s) 747
AsiGI ACCGGT 1 cut(s) 1893
AspA2I CCTAGG 2 cut(s) 1135, 1274
AspS9I GGNCC 3 cut(s) 701, 851, 2183
AsuHPI GGTGA 2 cut(s) 476, 724
AvaI CYCGRG 3 cut(s) 195, 311, 344
AvrII CCTAGG 2 cut(s) 1135, 1274
AxyI CCTNAGG 1 cut(s) 2010
BamHI GGATCC 1 cut(s) 618
BanII GRGCYC 1 cut(s) 1195
BauI CACGAG 1 cut(s) 2138
BbsI GAAGAC 1 cut(s) 1702
Bbv12I GWGCWC 1 cut(s) 1754
BbvCI CCTCAGC 1 cut(s) 2070
BbvI GCAGC 8 cut(s) 361, 449, 1000, 1548, 1799, 2146, 2149, 2152
BccI CCATC 4 cut(s) 692, 1472, 1661, 1998
BceAI ACGGC 3 cut(s) 61, 337, 366
BcgI CGANNNNNNTGC 2 cut(s) 2119, 2153
BciT130I CCWGG 1 cut(s) 2187
BclI TGATCA 1 cut(s) 1341
BcoDI GTCTC 1 cut(s) 93
BfaI CTAG 4 cut(s) 1136, 1275, 1682, 1755
BfmI CTRYAG 3 cut(s) 1008, 1043, 1785
BglI GCCNNNNNGGC 1 cut(s) 428
BglII AGATCT 1 cut(s) 34
BlnI CCTAGG 2 cut(s) 1135, 1274
BlpI GCTNAGC 1 cut(s) 1059
Bme1390I CCNGG 1 cut(s) 2187
BmeT110I CYCGRG 3 cut(s) 195, 311, 344
BmgT120I GGNCC 3 cut(s) 701, 851, 2183
BmiI GGNNCC 5 cut(s) 231, 620, 1823, 2184, 2205
BmrFI CCNGG 1 cut(s) 2187
BmrI ACTGGG 1 cut(s) 1778
BmsI GCATC 4 cut(s) 889, 1257, 1324, 2146
BmuI ACTGGG 1 cut(s) 1778
BpiI GAAGAC 1 cut(s) 1702
BplI GAGNNNNNCTC 2 cut(s) 1177, 1209
BpmI CTGGAG 2 cut(s) 1376, 2132
Bpu10I CCTNAGC 1 cut(s) 2070
Bpu1102I GCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 2 cut(s) 89, 1179
Bsa29I ATCGAT 1 cut(s) 1665
BsaBI GATNNNNATC 1 cut(s) 39
BsaJI CCNNGG 5 cut(s) 382, 492, 1135, 1274, 1845
BsaWI WCCGGW 1 cut(s) 1893
BsaXI ACNNNNNCTCC 2 cut(s) 1194, 1224
Bsc4I CCNNNNNNNGG 6 cut(s) 493, 1831, 2180, 2181, 2213, 2217
Bse118I RCCGGY 2 cut(s) 1879, 1893
Bse1I ACTGG 8 cut(s) 547, 699, 746, 932, 1036, 1359, 1773, 2115
Bse21I CCTNAGG 1 cut(s) 2010
Bse3DI GCAATG 3 cut(s) 1167, 1526, 1678
Bse8I GATNNNNATC 1 cut(s) 39
BseBI CCWGG 1 cut(s) 2187
BseCI ATCGAT 1 cut(s) 1665
BseDI CCNNGG 5 cut(s) 382, 492, 1135, 1274, 1845
BseGI GGATG 8 cut(s) 121, 274, 328, 703, 820, 1103, 1450, 1932
BseJI GATNNNNATC 1 cut(s) 39
BseLI CCNNNNNNNGG 6 cut(s) 493, 1831, 2180, 2181, 2213, 2217
BseMI GCAATG 3 cut(s) 1167, 1526, 1678
BseMII CTCAG 6 cut(s) 266, 302, 1050, 1739, 2001, 2061
BseNI ACTGG 8 cut(s) 547, 699, 746, 932, 1036, 1359, 1773, 2115
BseRI GAGGAG 5 cut(s) 161, 176, 188, 191, 224
BseXI GCAGC 8 cut(s) 361, 449, 1000, 1548, 1799, 2146, 2149, 2152
BseYI CCCAGC 1 cut(s) 2190
BsgI GTGCAG 2 cut(s) 1007, 2151
BshFI GGCC 7 cut(s) 71, 381, 422, 703, 852, 1398, 2185
BshTI ACCGGT 1 cut(s) 1893
BshVI ATCGAT 1 cut(s) 1665
BsiHKAI GWGCWC 1 cut(s) 1754
BsiHKCI CYCGRG 3 cut(s) 195, 311, 344
BsiSI CCGG 3 cut(s) 1091, 1880, 1894
BslFI GGGAC 4 cut(s) 651, 705, 1212, 2158
BslI CCNNNNNNNGG 6 cut(s) 493, 1831, 2180, 2181, 2213, 2217
BsmAI GTCTC 1 cut(s) 93
BsmFI GGGAC 4 cut(s) 651, 705, 1212, 2158
BsnI GGCC 7 cut(s) 71, 381, 422, 703, 852, 1398, 2185
BsoBI CYCGRG 3 cut(s) 195, 311, 344
Bsp1286I GDGCHC 2 cut(s) 1195, 1754
Bsp143I GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
Bsp1720I GCTNAGC 1 cut(s) 1059
Bsp19I CCATGG 1 cut(s) 1845
BspACI CCGC 5 cut(s) 83, 233, 1558, 1690, 2211
BspANI GGCC 7 cut(s) 71, 381, 422, 703, 852, 1398, 2185
BspCNI CTCAG 6 cut(s) 265, 301, 1051, 1740, 2002, 2062
BspDI ATCGAT 1 cut(s) 1665
BspLI GGNNCC 5 cut(s) 231, 620, 1823, 2184, 2205
BspMAI CTGCAG 2 cut(s) 1047, 1789
BspPI GGATC 6 cut(s) 613, 626, 1420, 1489, 2043, 2133
BsrBI CCGCTC 1 cut(s) 1690
BsrDI GCAATG 3 cut(s) 1167, 1526, 1678
BsrFI RCCGGY 2 cut(s) 1879, 1893
BsrI ACTGG 8 cut(s) 547, 699, 746, 932, 1036, 1359, 1773, 2115
BssAI RCCGGY 2 cut(s) 1879, 1893
BssECI CCNNGG 5 cut(s) 382, 492, 1135, 1274, 1845
BssMI GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
BssNAI GTATAC 1 cut(s) 1802
BssSI CACGAG 1 cut(s) 2138
BssT1I CCWWGG 3 cut(s) 1135, 1274, 1845
Bst1107I GTATAC 1 cut(s) 1802
Bst2BI CACGAG 1 cut(s) 2138
Bst2UI CCWGG 1 cut(s) 2187
Bst4CI ACNGT 4 cut(s) 1551, 1599, 1806, 1814
Bst6I CTCTTC 5 cut(s) 105, 201, 1173, 1178, 2025
BstC8I GCNNGC 5 cut(s) 1538, 1566, 1570, 1842, 2225
BstDEI CTNAG 7 cut(s) 252, 288, 1059, 1605, 1748, 2010, 2070
BstDSI CCRYGG 2 cut(s) 382, 1845
BstENI CCTNNNNNAGG 1 cut(s) 491
BstF5I GGATG 8 cut(s) 121, 274, 328, 703, 820, 1103, 1450, 1932
BstKTI GATC 9 cut(s) 37, 591, 621, 1344, 1428, 1484, 2038, 2128, 2137
BstMAI GTCTC 1 cut(s) 93
BstMBI GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
BstMWI GCNNNNNNNGC 5 cut(s) 68, 428, 437, 1876, 2165
BstNI CCWGG 1 cut(s) 2187
BstNSI RCATGY 4 cut(s) 50, 838, 1967, 2227
BstSCI CCNGG 1 cut(s) 2185
BstSFI CTRYAG 3 cut(s) 1008, 1043, 1785
BstV1I GCAGC 8 cut(s) 361, 449, 1000, 1548, 1799, 2146, 2149, 2152
BstV2I GAAGAC 1 cut(s) 1702
BstX2I RGATCY 3 cut(s) 34, 618, 2035
BstXI CCANNNNNNTGG 1 cut(s) 1394
BstYI RGATCY 3 cut(s) 34, 618, 2035
BstZ17I GTATAC 1 cut(s) 1802
Bsu15I ATCGAT 1 cut(s) 1665
Bsu36I CCTNAGG 1 cut(s) 2010
BsuRI GGCC 7 cut(s) 71, 381, 422, 703, 852, 1398, 2185
BsuTUI ATCGAT 1 cut(s) 1665
BtgI CCRYGG 2 cut(s) 382, 1845
BtsCI GGATG 8 cut(s) 121, 274, 328, 703, 820, 1103, 1450, 1932
BtsI GCAGTG 1 cut(s) 2137
BtsIMutI CAGTG 5 cut(s) 1352, 1604, 1819, 2104, 2137
Cac8I GCNNGC 5 cut(s) 1538, 1566, 1570, 1842, 2225
Cfr10I RCCGGY 2 cut(s) 1879, 1893
Cfr13I GGNCC 3 cut(s) 701, 851, 2183
ClaI ATCGAT 1 cut(s) 1665
CseI GACGC 1 cut(s) 1214
Csp6I GTAC 2 cut(s) 530, 1000
CspAI ACCGGT 1 cut(s) 1893
CviQI GTAC 2 cut(s) 530, 1000
DdeI CTNAG 7 cut(s) 252, 288, 1059, 1605, 1748, 2010, 2070
DpnI GATC 9 cut(s) 36, 590, 620, 1343, 1427, 1483, 2037, 2127, 2136
DpnII GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
Eam1104I CTCTTC 5 cut(s) 105, 201, 1173, 1178, 2025
EarI CTCTTC 5 cut(s) 105, 201, 1173, 1178, 2025
EciI GGCGGA 1 cut(s) 98
Eco130I CCWWGG 3 cut(s) 1135, 1274, 1845
Eco24I GRGCYC 1 cut(s) 1195
Eco81I CCTNAGG 1 cut(s) 2010
Eco88I CYCGRG 3 cut(s) 195, 311, 344
EcoNI CCTNNNNNAGG 1 cut(s) 491
EcoO109I RGGNCCY 1 cut(s) 2183
EcoRI GAATTC 1 cut(s) 2018
EcoRII CCWGG 1 cut(s) 2185
EcoT14I CCWWGG 3 cut(s) 1135, 1274, 1845
EcoT38I GRGCYC 1 cut(s) 1195
ErhI CCWWGG 3 cut(s) 1135, 1274, 1845
FalI AAGNNNNNCTT 2 cut(s) 1395, 1427
FaqI GGGAC 4 cut(s) 651, 705, 1212, 2158
FauNDI CATATG 1 cut(s) 880
FbaI TGATCA 1 cut(s) 1341
FblI GTMKAC 1 cut(s) 1801
FokI GGATG 8 cut(s) 128, 281, 335, 710, 827, 1090, 1437, 1939
FriOI GRGCYC 1 cut(s) 1195
FspBI CTAG 4 cut(s) 1136, 1275, 1682, 1755
GsaI CCCAGC 1 cut(s) 2194
GsuI CTGGAG 2 cut(s) 1376, 2132
HaeIII GGCC 7 cut(s) 71, 381, 422, 703, 852, 1398, 2185
HapII CCGG 3 cut(s) 1091, 1880, 1894
HgaI GACGC 1 cut(s) 1214
HincII GTYRAC 2 cut(s) 1029, 1504
HindII GTYRAC 2 cut(s) 1029, 1504
HindIII AAGCTT 2 cut(s) 1409, 1955
HinfI GANTC 9 cut(s) 19, 86, 286, 1021, 1121, 1466, 1662, 2063, 2146
HpaII CCGG 3 cut(s) 1091, 1880, 1894
HphI GGTGA 2 cut(s) 476, 724
Hpy166II GTNNAC 9 cut(s) 359, 484, 765, 1029, 1504, 1602, 1766, 1802, 1891
Hpy188I TCNGA 9 cut(s) 93, 301, 1241, 1341, 1437, 1587, 1749, 1926, 2054
Hpy188III TCNNGA 5 cut(s) 313, 344, 1331, 1454, 1994
Hpy8I GTNNAC 9 cut(s) 359, 484, 765, 1029, 1504, 1602, 1766, 1802, 1891
Hpy99I CGWCG 2 cut(s) 67, 82
HpyCH4III ACNGT 4 cut(s) 1551, 1599, 1806, 1814
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 428, 437, 1876, 2165
HpyF3I CTNAG 7 cut(s) 252, 288, 1059, 1605, 1748, 2010, 2070
Ksp22I TGATCA 1 cut(s) 1341
Kzo9I GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
LmnI GCTCC 2 cut(s) 189, 229
Lsp1109I GCAGC 8 cut(s) 361, 449, 1000, 1548, 1799, 2146, 2149, 2152
LweI GCATC 4 cut(s) 889, 1257, 1324, 2146
MaeI CTAG 4 cut(s) 1136, 1275, 1682, 1755
MaeIII GTNAC 4 cut(s) 797, 871, 1856, 2099
MalI GATC 9 cut(s) 36, 590, 620, 1343, 1427, 1483, 2037, 2127, 2136
MbiI CCGCTC 1 cut(s) 1690
MboI GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
MflI RGATCY 3 cut(s) 34, 618, 2035
MhlI GDGCHC 2 cut(s) 1195, 1754
MlyI GAGTC 5 cut(s) 95, 280, 1130, 1475, 2140
MmeI TCCRAC 5 cut(s) 116, 246, 762, 1453, 1904
MseI TTAA 7 cut(s) 26, 201, 681, 747, 914, 1413, 2238
MslI CAYNNNNRTG 2 cut(s) 243, 1392
MspA1I CMGCKG 2 cut(s) 1790, 2213
MspI CCGG 3 cut(s) 1091, 1880, 1894
MspR9I CCNGG 1 cut(s) 2187
MvaI CCWGG 1 cut(s) 2187
MwoI GCNNNNNNNGC 5 cut(s) 68, 428, 437, 1876, 2165
NcoI CCATGG 1 cut(s) 1845
NdeI CATATG 1 cut(s) 880
NdeII GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
NlaIV GGNNCC 5 cut(s) 231, 620, 1823, 2184, 2205
NmeAIII GCCGAG 1 cut(s) 97
NmuCI GTSAC 2 cut(s) 1856, 2099
NspI RCATGY 4 cut(s) 50, 838, 1967, 2227
PaeI GCATGC 1 cut(s) 2227
PaeR7I CTCGAG 1 cut(s) 311
PciI ACATGT 2 cut(s) 46, 1963
PfeI GAWTC 4 cut(s) 19, 1021, 1662, 2063
PinAI ACCGGT 1 cut(s) 1893
PleI GAGTC 5 cut(s) 94, 280, 1129, 1474, 2140
PpsI GAGTC 5 cut(s) 94, 280, 1129, 1474, 2140
PscI ACATGT 2 cut(s) 46, 1963
PshBI ATTAAT 1 cut(s) 747
Psp6I CCWGG 1 cut(s) 2185
PspFI CCCAGC 1 cut(s) 2190
PspGI CCWGG 1 cut(s) 2185
PspN4I GGNNCC 5 cut(s) 231, 620, 1823, 2184, 2205
PspPI GGNCC 3 cut(s) 701, 851, 2183
PstI CTGCAG 2 cut(s) 1047, 1789
PsuI RGATCY 3 cut(s) 34, 618, 2035
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 2 cut(s) 531, 1001
RsaNI GTAC 2 cut(s) 530, 1000
RseI CAYNNNNRTG 2 cut(s) 243, 1392
SaqAI TTAA 7 cut(s) 26, 201, 681, 747, 914, 1413, 2238
Sau3AI GATC 9 cut(s) 34, 588, 618, 1341, 1425, 1481, 2035, 2125, 2134
Sau96I GGNCC 3 cut(s) 701, 851, 2183
SchI GAGTC 5 cut(s) 95, 280, 1130, 1475, 2140
ScrFI CCNGG 1 cut(s) 2187
SduI GDGCHC 2 cut(s) 1195, 1754
SfaNI GCATC 4 cut(s) 889, 1257, 1324, 2146
SfcI CTRYAG 3 cut(s) 1008, 1043, 1785
Sfr274I CTCGAG 1 cut(s) 311
SlaI CTCGAG 1 cut(s) 311
SmiMI CAYNNNNRTG 2 cut(s) 243, 1392
SmlI CTYRAG 3 cut(s) 104, 311, 1194
SmoI CTYRAG 3 cut(s) 104, 311, 1194
SphI GCATGC 1 cut(s) 2227
SsiI CCGC 5 cut(s) 83, 233, 1558, 1690, 2211
SspI AATATT 1 cut(s) 1740
SspMI CTAG 4 cut(s) 1136, 1275, 1682, 1755
StyD4I CCNGG 1 cut(s) 2185
StyI CCWWGG 3 cut(s) 1135, 1274, 1845
TaaI ACNGT 4 cut(s) 1551, 1599, 1806, 1814
TaqI TCGA 3 cut(s) 189, 312, 1665
TatI WGTACW 1 cut(s) 999
TauI GCSGC 2 cut(s) 235, 1561
TfiI GAWTC 4 cut(s) 19, 1021, 1662, 2063
Tru1I TTAA 7 cut(s) 26, 201, 681, 747, 914, 1413, 2238
Tru9I TTAA 7 cut(s) 26, 201, 681, 747, 914, 1413, 2238
TscAI CASTG 5 cut(s) 1359, 1604, 1819, 2104, 2137
TseFI GTSAC 2 cut(s) 1856, 2099
TseI GCWGC 8 cut(s) 349, 437, 988, 1561, 1787, 2159, 2162, 2165
Tsp45I GTSAC 2 cut(s) 1856, 2099
TspDTI ATGAA 8 cut(s) 765, 791, 897, 963, 1125, 1178, 1262, 1874
TspRI CASTG 5 cut(s) 1359, 1604, 1819, 2104, 2137
VspI ATTAAT 1 cut(s) 747
XagI CCTNNNNNAGG 1 cut(s) 491
XapI RAATTY 4 cut(s) 753, 1115, 1529, 2018
XceI RCATGY 4 cut(s) 50, 838, 1967, 2227
XcmI CCANNNNNNNNNTGG 1 cut(s) 638
XhoI CTCGAG 1 cut(s) 311
XmaJI CCTAGG 2 cut(s) 1135, 1274
XmiI GTMKAC 1 cut(s) 1801
XspI CTAG 4 cut(s) 1136, 1275, 1682, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.