MD15G1264100.v1.1

ATP-dependent DNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0003343
Physical Location & Seq
Reverse (-)
22639462 .. 22645391
5930 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1264100.v1.1.491

Sequence Viewer

Length: 1971 bp
ATGGATAACATCACACTTATTGGAGCCAATCAACCGAGTGAAACTGTTGAGGAAAAGAATGTTGAGGAGAAGAAAGGTCGTGGTAGGAAAAGAAAAGCAGCTGCAAATTTTGATAATAGGAAGGCCAAGAAGGCAGTTGAAGCTATGCTTACAAGATCTAAAGAGGGTGTGAAAACTGAAGATGAGAACCTCACTGAAGAAGAAAGAATTGAGAAAGAGCAAAAGGAACTTGTACCTCTGTTGACTGGTGGAAAATTGAAGTCTTATCAAATCAAAGGTGTAAAGTGGTTGATCTCATTATGGCAAAATGGGCTAAATGGGATCCTTGCGGATCAAATGGGACTTGGAAAAACCATCCAGACCATTGGTTTTCTTGCTCATCTAAAAGGGAATGGAATGGATGGGCCCTACTTAGTGATTGCTCCTCTTTCTACTCTTGCGAATTGGGTAAATGAAATTTCAAGGTTCACGCCTTCAATAAATGCTATTGTCTACCATGGTGACAAGAAACAAAGGGATGAGATACGAAGGAAGCACATGCCTCGACAAATTGGCCCTAAGTTCCCTATAATTGTTACTTCATATGAAGTTGCAATGGCTGATGCAAGAAAATGTTTGAGACATTACAATTGGAAATATCTTGTGGTTGACGAAGGACACAGATTGAAGAACTCAAAGTGCAAACTACTGCGGGAATTGAAATTATTACATGTAGACAATAAGATTCTGTTGACTGGGACGCCTCTACAGAATAATCTGGCAGAGCTTTGGTCATTATTGAATTTCATTTTGCCTGATATATTCTCATCCCATGAAGAATTTGAGTCATGGTTTGATTTAGCAGGAAAGTGCAGTAATGAGGCAATGAAGGAAGAATTGGAAGAGAAGAGAAGGGCTCAAATGGTTGCAAAACTCCATGCCATCTTGCGTCCTTTTCTTCTTCGAAGAATGAAGTCTGATGTTGAGCACATGCTTCCTAGGAAAAAGGAAATCATATTATATGCATCCATGACAGATCATCAAAAACATTTTCAAGATCTTTTGATCAATAAGACATTGGAGAATTATTTACTTGAGAGGGGAGATCATGTTTGCGGTATGAAAGGAAAGCTTAACAATCTGATGGTCCAACTTCGGAAGAACTGCAATCATCCTGACCTTTTGGAGTCGGCATTTGATGGCTCATATTACTACCCACCTGTTGAACAGATTGTTGAACAGTGTGGAAAATTTAGTTTGCTGGACAGACTGTTAAAGCACCTGTTTGCCCGCAAACACAAAGTTCTTATCTTTTCTCAGTGGACTAAGATTTTGGATATTATGGAGTACTATTTTAGTGAGAAAGGATGTGAAGTTTGTAGAATTGATGGCAATGTGAAACTTGAAGAACGGAGAAGTCAGATTGCAGCGTTCAACGATGTGGACAGCAATTATAGAATTTTTCTTTTAAGCACCAGGGCTGGTGGACTGGGTATCAACCTTACTGCAGCTGACACTTGTATACTGTACGACAGTGATTGGAACCCTCAAATGGATTTGCAAGCCATGGATAGATGCCACAGGATTGGTCAAACAAAGCCTGTTCATGTTTACAGGTTGGCGACGGCACAATCTGTAGAGGGTCGGATTCTGAAAAGAGCTTTTAGCAAGTTGAAGCTTGAACATGTGGTGATTGGGAAAGGGCAGTTTCATCAAGAAAAAGCGAAGAGTAGTACTGATGTCTCAGAGGAAGAGGATCTTATAGCTTTGCTAAGAGAGGAAGAATCTGCTGAAGACAAGATGATACAGACAGTTATCAGTGACAAAGATTTGGAGAGGGTGTTGGATCGCAGTGATCTAGTGTGCAGTCCTGCTGATCATGATGAAGAGAAGGCCAATGGTGTTGCCAATGTTCTTCCCCTCAAGGGCCCTGGCTGGGAGGTGGTGCTACCCACTGCAGGTGGAGGCATGCTCTCCACCCTCAATAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000786 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006342 GO:0006344 GO:0006346 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016043 GO:0016458 GO:0016462 GO:0016569 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031056 GO:0031057 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031401 GO:0032196 GO:0032197 GO:0032268 GO:0032269 GO:0032270 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0035065 GO:0035067 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044030 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044764 GO:0044815 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0060255 GO:0065007 GO:0070035 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090239 GO:0090241 GO:0090304 GO:0140097 GO:1901360 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1905269 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

657

Amino Acids

74.88

Weight (kDa)

8.41

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 85 - 248 3.1e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 89 - 387 5.7e-85 SNF2-related domain
DEAD PF00270 103 - 251 2.5e-07 DEAD/DEAH box helicase
Helicase_C PF00271 410 - 523 2.7e-26 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1928
Acc36I ACCTGC 1 cut(s) 1928
AccI GTMKAC 3 cut(s) 492, 714, 1501
AciI CCGC 4 cut(s) 329, 691, 1095, 1270
AclWI GGATC 5 cut(s) 316, 329, 339, 1743, 1833
AcsI RAATTY 6 cut(s) 106, 456, 781, 818, 1229, 1437
AcuI CTGAAG 3 cut(s) 198, 216, 1791
AcyI GRCGYC 1 cut(s) 740
AfaI GTAC 4 cut(s) 234, 1328, 1508, 1714
AfiI CCNNNNNNNGG 4 cut(s) 1531, 1904, 1915, 1937
AflIII ACRYGT 2 cut(s) 709, 1663
AjnI CCWGG 2 cut(s) 1454, 1909
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
AluBI AGCT 9 cut(s) 101, 143, 766, 1111, 1490, 1640, 1657, 1745, 1968
AluI AGCT 9 cut(s) 101, 143, 766, 1111, 1490, 1640, 1657, 1745, 1968
Alw21I GWGCWC 1 cut(s) 969
Alw26I GTCTC 2 cut(s) 613, 1726
AlwI GGATC 5 cut(s) 316, 329, 339, 1743, 1833
AoxI GGCC 5 cut(s) 123, 404, 553, 1872, 1906
ApaI GGGCCC 2 cut(s) 408, 1910
ApeKI GCWGC 4 cut(s) 98, 101, 1406, 1487
ApoI RAATTY 6 cut(s) 106, 456, 781, 818, 1229, 1437
ArsI GACNNNNNNTTYG 2 cut(s) 1294, 1326
AspA2I CCTAGG 1 cut(s) 977
AspS9I GGNCC 6 cut(s) 404, 405, 554, 1126, 1906, 1907
AsuHPI GGTGA 2 cut(s) 512, 1681
AsuII TTCGAA 1 cut(s) 943
AvaII GGWCC 1 cut(s) 1126
AvrII CCTAGG 1 cut(s) 977
BaeGI GKGCMC 2 cut(s) 408, 1910
BamHI GGATCC 1 cut(s) 321
BanII GRGCYC 3 cut(s) 408, 898, 1910
BbsI GAAGAC 1 cut(s) 1779
Bbv12I GWGCWC 1 cut(s) 969
BbvI GCAGC 4 cut(s) 88, 110, 1418, 1499
BccI CCATC 6 cut(s) 362, 395, 929, 1117, 1172, 1361
BceAI ACGGC 1 cut(s) 1620
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 2 cut(s) 1456, 1911
BclI TGATCA 2 cut(s) 1044, 1855
BcoDI GTCTC 2 cut(s) 613, 1726
BfaI CTAG 2 cut(s) 978, 1838
BfmI CTRYAG 4 cut(s) 746, 1485, 1614, 1935
BfuAI ACCTGC 1 cut(s) 1928
BglI GCCNNNNNGGC 1 cut(s) 131
BglII AGATCT 2 cut(s) 155, 1036
BisI GCNGC 4 cut(s) 99, 102, 1407, 1488
BlnI CCTAGG 1 cut(s) 977
BlsI GCNGC 4 cut(s) 100, 103, 1408, 1489
BmcAI AGTACT 2 cut(s) 1328, 1714
Bme1390I CCNGG 2 cut(s) 1456, 1911
Bme18I GGWCC 1 cut(s) 1126
BmgT120I GGNCC 6 cut(s) 404, 405, 554, 1126, 1906, 1907
BmiI GGNNCC 5 cut(s) 25, 323, 406, 1523, 1908
BmrFI CCNGG 2 cut(s) 1456, 1911
BmrI ACTGGG 2 cut(s) 744, 1478
BmsI GCATC 3 cut(s) 592, 1013, 1544
BmuI ACTGGG 2 cut(s) 744, 1478
BpiI GAAGAC 1 cut(s) 1779
BplI GAGNNNNNCTC 4 cut(s) 880, 912, 1935, 1967
Bpu14I TTCGAA 1 cut(s) 943
BpuEI CTTGAG 2 cut(s) 1094, 1886
BsaHI GRCGYC 1 cut(s) 740
BsaJI CCNNGG 5 cut(s) 496, 977, 1455, 1545, 1909
BsaXI ACNNNNNCTCC 4 cut(s) 1074, 1104, 1805, 1835
Bsc4I CCNNNNNNNGG 4 cut(s) 1531, 1904, 1915, 1937
Bse1I ACTGG 3 cut(s) 250, 739, 1473
Bse3DI GCAATG 3 cut(s) 600, 870, 1378
BseBI CCWGG 2 cut(s) 1456, 1911
BseDI CCNNGG 5 cut(s) 496, 977, 1455, 1545, 1909
BseGI GGATG 7 cut(s) 354, 406, 523, 806, 1004, 1150, 1352
BseLI CCNNNNNNNGG 4 cut(s) 1531, 1904, 1915, 1937
BseMI GCAATG 3 cut(s) 600, 870, 1378
BseMII CTCAG 2 cut(s) 1310, 1737
BseNI ACTGG 3 cut(s) 250, 739, 1473
BseRI GAGGAG 2 cut(s) 80, 414
BseSI GKGCMC 2 cut(s) 408, 1910
BseXI GCAGC 4 cut(s) 88, 110, 1418, 1499
BseYI CCCAGC 1 cut(s) 1914
BsgI GTGCAG 2 cut(s) 871, 1864
BshFI GGCC 5 cut(s) 125, 406, 555, 1874, 1908
BsiHKAI GWGCWC 1 cut(s) 969
BslFI GGGAC 2 cut(s) 354, 751
BslI CCNNNNNNNGG 4 cut(s) 1531, 1904, 1915, 1937
BsmAI GTCTC 2 cut(s) 613, 1726
BsmFI GGGAC 2 cut(s) 354, 751
BsnI GGCC 5 cut(s) 125, 406, 555, 1874, 1908
Bsp119I TTCGAA 1 cut(s) 943
Bsp120I GGGCCC 2 cut(s) 404, 1906
Bsp1286I GDGCHC 4 cut(s) 408, 898, 969, 1910
Bsp19I CCATGG 2 cut(s) 496, 1545
BspACI CCGC 4 cut(s) 329, 691, 1095, 1270
BspANI GGCC 5 cut(s) 125, 406, 555, 1874, 1908
BspCNI CTCAG 2 cut(s) 1309, 1736
BspHI TCATGA 1 cut(s) 1858
BspLI GGNNCC 5 cut(s) 25, 323, 406, 1523, 1908
BspMAI CTGCAG 2 cut(s) 1489, 1939
BspMI ACCTGC 1 cut(s) 1928
BspPI GGATC 5 cut(s) 316, 329, 339, 1743, 1833
BspT104I TTCGAA 1 cut(s) 943
BsrDI GCAATG 3 cut(s) 600, 870, 1378
BsrI ACTGG 3 cut(s) 250, 739, 1473
BssECI CCNNGG 5 cut(s) 496, 977, 1455, 1545, 1909
BssNAI GTATAC 1 cut(s) 1502
BssNI GRCGYC 1 cut(s) 740
BssT1I CCWWGG 3 cut(s) 496, 977, 1545
Bst1107I GTATAC 1 cut(s) 1502
Bst2UI CCWGG 2 cut(s) 1456, 1911
Bst4CI ACNGT 6 cut(s) 46, 1221, 1251, 1506, 1514, 1792
Bst6I CTCTTC 5 cut(s) 876, 881, 1700, 1725, 1860
BstACI GRCGYC 1 cut(s) 740
BstBI TTCGAA 1 cut(s) 943
BstC8I GCNNGC 3 cut(s) 1270, 1542, 1949
BstDEI CTNAG 6 cut(s) 412, 558, 1296, 1305, 1723, 1751
BstDSI CCRYGG 2 cut(s) 496, 1545
BstF5I GGATG 7 cut(s) 354, 406, 523, 806, 1004, 1150, 1352
BstMAI GTCTC 2 cut(s) 613, 1726
BstMWI GCNNNNNNNGC 3 cut(s) 131, 140, 310
BstNI CCWGG 2 cut(s) 1456, 1911
BstNSI RCATGY 5 cut(s) 541, 713, 973, 1667, 1951
BstSCI CCNGG 2 cut(s) 1454, 1909
BstSFI CTRYAG 4 cut(s) 746, 1485, 1614, 1935
BstSLI GKGCMC 2 cut(s) 408, 1910
BstV1I GCAGC 4 cut(s) 88, 110, 1418, 1499
BstV2I GAAGAC 1 cut(s) 1779
BstX2I RGATCY 4 cut(s) 155, 321, 1036, 1735
BstXI CCANNNNNNTGG 2 cut(s) 365, 1565
BstYI RGATCY 4 cut(s) 155, 321, 1036, 1735
BstZ17I GTATAC 1 cut(s) 1502
BsuRI GGCC 5 cut(s) 125, 406, 555, 1874, 1908
BtgI CCRYGG 2 cut(s) 496, 1545
BtsCI GGATG 7 cut(s) 354, 406, 523, 806, 1004, 1150, 1352
BtsI GCAGTG 2 cut(s) 1837, 1932
BtsIMutI CAGTG 7 cut(s) 192, 1226, 1304, 1519, 1804, 1837, 1932
BveI ACCTGC 1 cut(s) 1928
Cac8I GCNNGC 3 cut(s) 1270, 1542, 1949
CciI TCATGA 1 cut(s) 1858
Cfr13I GGNCC 6 cut(s) 404, 405, 554, 1126, 1906, 1907
CseI GACGC 2 cut(s) 748, 917
Csp6I GTAC 4 cut(s) 233, 1327, 1507, 1713
CviQI GTAC 4 cut(s) 233, 1327, 1507, 1713
DdeI CTNAG 6 cut(s) 412, 558, 1296, 1305, 1723, 1751
Eam1104I CTCTTC 5 cut(s) 876, 881, 1700, 1725, 1860
EarI CTCTTC 5 cut(s) 876, 881, 1700, 1725, 1860
Eco130I CCWWGG 3 cut(s) 496, 977, 1545
Eco24I GRGCYC 3 cut(s) 408, 898, 1910
Eco47I GGWCC 1 cut(s) 1126
Eco57I CTGAAG 3 cut(s) 198, 216, 1791
EcoO109I RGGNCCY 3 cut(s) 405, 1906, 1907
EcoRII CCWGG 2 cut(s) 1454, 1909
EcoT14I CCWWGG 3 cut(s) 496, 977, 1545
EcoT22I ATGCAT 1 cut(s) 1006
EcoT38I GRGCYC 3 cut(s) 408, 898, 1910
ErhI CCWWGG 3 cut(s) 496, 977, 1545
FalI AAGNNNNNCTT 6 cut(s) 132, 164, 1095, 1127, 1722, 1754
FaqI GGGAC 2 cut(s) 354, 751
FauI CCCGC 2 cut(s) 684, 1277
FauNDI CATATG 1 cut(s) 583
FbaI TGATCA 2 cut(s) 1044, 1855
FblI GTMKAC 3 cut(s) 492, 714, 1501
Fnu4HI GCNGC 4 cut(s) 99, 102, 1407, 1488
FokI GGATG 7 cut(s) 341, 413, 530, 793, 991, 1137, 1359
FriOI GRGCYC 3 cut(s) 408, 898, 1910
Fsp4HI GCNGC 4 cut(s) 99, 102, 1407, 1488
FspBI CTAG 2 cut(s) 978, 1838
GluI GCNGC 4 cut(s) 99, 102, 1407, 1488
GsaI CCCAGC 1 cut(s) 1918
HaeIII GGCC 5 cut(s) 125, 406, 555, 1874, 1908
HgaI GACGC 2 cut(s) 748, 917
Hin1I GRCGYC 1 cut(s) 740
HincII GTYRAC 3 cut(s) 243, 649, 732
HindII GTYRAC 3 cut(s) 243, 649, 732
HindIII AAGCTT 2 cut(s) 1109, 1655
HinfI GANTC 5 cut(s) 724, 824, 1166, 1627, 1763
HphI GGTGA 2 cut(s) 512, 1681
Hpy188I TCNGA 7 cut(s) 958, 1122, 1137, 1401, 1626, 1632, 1726
Hpy188III TCNNGA 5 cut(s) 358, 1034, 1154, 1694, 1859
Hpy99I CGWCG 1 cut(s) 1606
HpyAV CCTTC 8 cut(s) 115, 124, 483, 522, 647, 862, 885, 1864
HpyCH4III ACNGT 6 cut(s) 46, 1221, 1251, 1506, 1514, 1792
HpyF10VI GCNNNNNNNGC 3 cut(s) 131, 140, 310
HpyF3I CTNAG 6 cut(s) 412, 558, 1296, 1305, 1723, 1751
Hsp92I GRCGYC 1 cut(s) 740
Ksp22I TGATCA 2 cut(s) 1044, 1855
LmnI GCTCC 2 cut(s) 23, 427
Lsp1109I GCAGC 4 cut(s) 88, 110, 1418, 1499
LweI GCATC 3 cut(s) 592, 1013, 1544
MaeI CTAG 2 cut(s) 978, 1838
MaeIII GTNAC 3 cut(s) 500, 574, 1799
MfeI CAATTG 1 cut(s) 628
MflI RGATCY 4 cut(s) 155, 321, 1036, 1735
MhlI GDGCHC 4 cut(s) 408, 898, 969, 1910
MlyI GAGTC 2 cut(s) 833, 1175
MmeI TCCRAC 3 cut(s) 1153, 1604, 1803
Mph1103I ATGCAT 1 cut(s) 1006
MseI TTAA 3 cut(s) 1113, 1253, 1448
MspA1I CMGCKG 2 cut(s) 101, 1490
MspR9I CCNGG 2 cut(s) 1456, 1911
MunI CAATTG 1 cut(s) 628
MvaI CCWGG 2 cut(s) 1456, 1911
MwoI GCNNNNNNNGC 3 cut(s) 131, 140, 310
NcoI CCATGG 2 cut(s) 496, 1545
NdeI CATATG 1 cut(s) 583
NlaIV GGNNCC 5 cut(s) 25, 323, 406, 1523, 1908
NmuCI GTSAC 2 cut(s) 500, 1799
NsiI ATGCAT 1 cut(s) 1006
NspI RCATGY 5 cut(s) 541, 713, 973, 1667, 1951
NspV TTCGAA 1 cut(s) 943
PaeI GCATGC 1 cut(s) 1951
PagI TCATGA 1 cut(s) 1858
PaqCI CACCTGC 1 cut(s) 1928
PciI ACATGT 2 cut(s) 709, 1663
PfeI GAWTC 3 cut(s) 724, 1627, 1763
PkrI GCNGC 4 cut(s) 100, 103, 1408, 1489
PleI GAGTC 2 cut(s) 832, 1174
PpsI GAGTC 2 cut(s) 832, 1174
PscI ACATGT 2 cut(s) 709, 1663
Psp6I CCWGG 2 cut(s) 1454, 1909
PspFI CCCAGC 1 cut(s) 1914
PspGI CCWGG 2 cut(s) 1454, 1909
PspN4I GGNNCC 5 cut(s) 25, 323, 406, 1523, 1908
PspOMI GGGCCC 2 cut(s) 404, 1906
PspPI GGNCC 6 cut(s) 404, 405, 554, 1126, 1906, 1907
PstI CTGCAG 2 cut(s) 1489, 1939
PsuI RGATCY 4 cut(s) 155, 321, 1036, 1735
PvuII CAGCTG 2 cut(s) 101, 1490
RsaI GTAC 4 cut(s) 234, 1328, 1508, 1714
RsaNI GTAC 4 cut(s) 233, 1327, 1507, 1713
SaqAI TTAA 3 cut(s) 1113, 1253, 1448
SatI GCNGC 4 cut(s) 99, 102, 1407, 1488
Sau96I GGNCC 6 cut(s) 404, 405, 554, 1126, 1906, 1907
ScaI AGTACT 2 cut(s) 1328, 1714
SchI GAGTC 2 cut(s) 833, 1175
ScrFI CCNGG 2 cut(s) 1456, 1911
SduI GDGCHC 4 cut(s) 408, 898, 969, 1910
SfaNI GCATC 3 cut(s) 592, 1013, 1544
SfcI CTRYAG 4 cut(s) 746, 1485, 1614, 1935
SfuI TTCGAA 1 cut(s) 943
SinI GGWCC 1 cut(s) 1126
SmlI CTYRAG 2 cut(s) 1073, 1901
SmoI CTYRAG 2 cut(s) 1073, 1901
SphI GCATGC 1 cut(s) 1951
SsiI CCGC 4 cut(s) 329, 691, 1095, 1270
SspMI CTAG 2 cut(s) 978, 1838
StyD4I CCNGG 2 cut(s) 1454, 1909
StyI CCWWGG 3 cut(s) 496, 977, 1545
TaaI ACNGT 6 cut(s) 46, 1221, 1251, 1506, 1514, 1792
TaqI TCGA 2 cut(s) 544, 943
TatI WGTACW 2 cut(s) 1326, 1712
TfiI GAWTC 3 cut(s) 724, 1627, 1763
Tru1I TTAA 3 cut(s) 1113, 1253, 1448
Tru9I TTAA 3 cut(s) 1113, 1253, 1448
TscAI CASTG 7 cut(s) 199, 1226, 1304, 1519, 1804, 1837, 1939
TseFI GTSAC 2 cut(s) 500, 1799
TseI GCWGC 4 cut(s) 98, 101, 1406, 1487
Tsp45I GTSAC 2 cut(s) 500, 1799
TspGWI ACGGA 1 cut(s) 1405
TspRI CASTG 7 cut(s) 199, 1226, 1304, 1519, 1804, 1837, 1939
VpaK11BI GGWCC 1 cut(s) 1126
XapI RAATTY 6 cut(s) 106, 456, 781, 818, 1229, 1437
XceI RCATGY 5 cut(s) 541, 713, 973, 1667, 1951
XmaJI CCTAGG 1 cut(s) 977
XmiI GTMKAC 3 cut(s) 492, 714, 1501
XspI CTAG 2 cut(s) 978, 1838
ZrmI AGTACT 2 cut(s) 1328, 1714
Zsp2I ATGCAT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.