MD15G1264200.v1.1

Membrane protein-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
22646734 .. 22650279
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1264200.v1.1.491

Sequence Viewer

Length: 1455 bp
ATGGCTCGAAACAAGGCCACTCAGAGGGCAGTAAAAGTATCAGCAGGAGCAGCAGCAATGGCAATTGCATGGGCAGTATTCATTAATCTTCTTATCATAACAGAAGTTGCCAGTGCAGATAGGCCTTTAAGAGACGAGATCATCAAGCCGGAAAAATCTGTCCAGAAAGATACACATGAATCATTTTTTGTGAGGGTGGTTAATTTTCTATGGCAGGCTGGAGGCTCTTCTTATCAGCCTGTTTGGCCTGAGATGAAGTTTGATTGGAAAATTGTAGTAGGATCAATAGTTGGATTCTTTGGTGCTGCATTGGGTAGTGTTGGTGGTGTTGGTGGGGGAGGAATTTTTGTTCCAATGCTAGCCTTGATCGTTGGCTTCGATCCCAAGTCTTCCACCGCGATTTCCAAGTGTATGATAATGGGAGCTGCTGGATCAACGGTATACTTCAATTTGAGACTGAGGCACCCAACACTGGACATGCCCCTCATAGATTATGATCTGGCATTGCTTTTTCAGCCAATGCTCATGCTAGGGATCAGCATCGGAGTTGCCTTCAATGTCATGTTTGCCGATTGGATGGTTACAGTTCTTCTTATCATTCTCTTCTTAGGTACAGCAGCAAAAGCTTTGATGAAAGGCGTGGAAACATGGAAGAAGGAAACAATGATGAAGGAGGAAGCAGAAAAGCTGTTGGAATCGGAGTCCAAACCAGGCGAGGGTTCTGGAGAAGACTACAAACCGCTACCTAGCAGTCCAGATTCATTGCAAGATGAGCAGGTACCAATAATGCGCAACATTTACTGGAAAGAGTTATCGTTGCTCATGTATGTCTGGGTGGCTTTTCTTATTGTCCAGATTGTGAAGACATACACCAAAACTTGCTCCACCATGTTCTGGATCATGAATTCATTGCAGGTACCAATTGCAATTTCCGTAACACTCTTCGAAGCCATATGCTTATGCAAAGGCACCAGAGTGATTGCATCAAAAGGAAAGGAAATCACGAACTGGAAGTTGCACCAGATTTTTCTCTACTGCAGCTGTGGAATTGTAGCTGGTATGGTCGGTGGACTACTTGGGCTGGGAGGTGGTTTCATCTTGGGACCCCTTTTTCTTGAACTGGGTATTCCTCCTCAGGTAGCAAGTGCTACATCCACCTTTGCAATGCTATTCTCATCCTCCATGTCAGTTGTACAGTATTATCTTCTCAACCGTTTCCCCGTCCCCTATGCTGCTTATTTTGTGTTAGTTGCAACAATTGCTGCATTTACTGGTCAGCATGTAGTGAGAAAGATAATTGCAGTCCTTGGGAGAGCATCCATTGTCATCTTCATTCTAGCTTTGACAATCTTTGTCAGCGCAATCAGCTTAGGTGGGGTGGGCATAGCAAACATGGTTGAAAAGATGGAGAATCAAGAGTACATGGGATTTGAAAATTTCTGTAACCCGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

485

Amino Acids

52.83

Weight (kDa)

8.33

Isoelectric Point (pI)

29.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 96 - 212 4e-11 Sulfite exporter TauE/SafE
TauE PF01925 347 - 452 7.1e-14 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 791
Acc36I ACCTGC 2 cut(s) 766, 904
Acc65I GGTACC 2 cut(s) 778, 916
AccB1I GGYRCC 4 cut(s) 462, 778, 916, 968
AccB7I CCANNNNNTGG 1 cut(s) 894
AccI GTMKAC 1 cut(s) 441
AccII CGCG 1 cut(s) 398
AciI CCGC 2 cut(s) 396, 740
AclWI GGATC 5 cut(s) 289, 374, 439, 542, 905
AcsI RAATTY 3 cut(s) 342, 904, 1435
AfaI GTAC 5 cut(s) 613, 780, 918, 1194, 1421
AfiI CCNNNNNNNGG 4 cut(s) 24, 472, 716, 894
AgsI TTSAA 5 cut(s) 448, 556, 1118, 1400, 1433
AjnI CCWGG 1 cut(s) 709
AjuI GAANNNNNNNTTGG 2 cut(s) 913, 945
AleI CACNNNNGTG 1 cut(s) 974
AloI GAACNNNNNNTCC 2 cut(s) 333, 365
AluBI AGCT 7 cut(s) 425, 626, 688, 1041, 1055, 1340, 1368
AluI AGCT 7 cut(s) 425, 626, 688, 1041, 1055, 1340, 1368
Alw26I GTCTC 2 cut(s) 126, 448
AlwI GGATC 5 cut(s) 289, 374, 439, 542, 905
AoxI GGCC 3 cut(s) 15, 122, 245
ApeKI GCWGC 8 cut(s) 50, 53, 305, 425, 617, 1038, 1232, 1262
ApoI RAATTY 3 cut(s) 342, 904, 1435
AseI ATTAAT 1 cut(s) 84
Asp718I GGTACC 2 cut(s) 778, 916
AspLEI GCGC 2 cut(s) 792, 1361
AspS9I GGNCC 1 cut(s) 1103
AsuII TTCGAA 1 cut(s) 945
AsuNHI GCTAGC 1 cut(s) 358
AvaII GGWCC 1 cut(s) 1103
AxyI CCTNAGG 1 cut(s) 1134
BanI GGYRCC 4 cut(s) 462, 778, 916, 968
BbsI GAAGAC 3 cut(s) 381, 735, 869
BbvI GCAGC 8 cut(s) 62, 65, 292, 412, 629, 1050, 1219, 1249
BccI CCATC 2 cut(s) 571, 1399
BciT130I CCWGG 1 cut(s) 711
BcoDI GTCTC 2 cut(s) 126, 448
BfaI CTAG 4 cut(s) 359, 530, 747, 1337
BfmI CTRYAG 1 cut(s) 1036
BfuAI ACCTGC 2 cut(s) 766, 904
BglI GCCNNNNNGGC 1 cut(s) 244
BisI GCNGC 8 cut(s) 51, 54, 306, 426, 618, 1039, 1233, 1263
BlsI GCNGC 8 cut(s) 52, 55, 307, 427, 619, 1040, 1234, 1264
Bme1390I CCNGG 1 cut(s) 711
Bme18I GGWCC 1 cut(s) 1103
BmgT120I GGNCC 1 cut(s) 1103
BmiI GGNNCC 6 cut(s) 464, 780, 918, 970, 1104, 1105
BmrFI CCNGG 1 cut(s) 711
BmrI ACTGGG 1 cut(s) 1130
BmsI GCATC 3 cut(s) 549, 992, 1325
BmtI GCTAGC 1 cut(s) 362
BmuI ACTGGG 1 cut(s) 1130
BpiI GAAGAC 3 cut(s) 381, 735, 869
BpmI CTGGAG 2 cut(s) 240, 744
Bpu10I CCTNAGC 1 cut(s) 1369
Bpu14I TTCGAA 1 cut(s) 945
BsaBI GATNNNNATC 2 cut(s) 495, 539
BsaJI CCNNGG 1 cut(s) 1306
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 472, 716, 894
Bse1I ACTGG 6 cut(s) 111, 477, 806, 1013, 1125, 1276
Bse21I CCTNAGG 1 cut(s) 1134
Bse3DI GCAATG 5 cut(s) 63, 503, 761, 908, 1170
Bse8I GATNNNNATC 2 cut(s) 495, 539
BseBI CCWGG 1 cut(s) 711
BseDI CCNNGG 1 cut(s) 1306
BseGI GGATG 4 cut(s) 582, 1151, 1175, 1316
BseJI GATNNNNATC 2 cut(s) 495, 539
BseLI CCNNNNNNNGG 4 cut(s) 24, 472, 716, 894
BseMI GCAATG 5 cut(s) 63, 503, 761, 908, 1170
BseMII CTCAG 4 cut(s) 35, 240, 449, 1148
BseNI ACTGG 6 cut(s) 111, 477, 806, 1013, 1125, 1276
BseRI GAGGAG 1 cut(s) 1122
BseXI GCAGC 8 cut(s) 62, 65, 292, 412, 629, 1050, 1219, 1249
BseYI CCCAGC 1 cut(s) 1081
BsgI GTGCAG 1 cut(s) 135
Bsh1236I CGCG 1 cut(s) 398
BshFI GGCC 3 cut(s) 17, 124, 247
BshNI GGYRCC 4 cut(s) 462, 778, 916, 968
BsiSI CCGG 1 cut(s) 149
BslFI GGGAC 2 cut(s) 1116, 1208
BslI CCNNNNNNNGG 4 cut(s) 24, 472, 716, 894
BsmAI GTCTC 2 cut(s) 126, 448
BsmBI CGTCTC 1 cut(s) 126
BsmFI GGGAC 2 cut(s) 1116, 1208
BsnI GGCC 3 cut(s) 17, 124, 247
Bsp119I TTCGAA 1 cut(s) 945
Bsp1407I TGTACA 1 cut(s) 1192
Bsp143I GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
BspACI CCGC 2 cut(s) 396, 740
BspANI GGCC 3 cut(s) 17, 124, 247
BspCNI CTCAG 4 cut(s) 34, 241, 450, 1147
BspFNI CGCG 1 cut(s) 398
BspHI TCATGA 1 cut(s) 900
BspLI GGNNCC 6 cut(s) 464, 780, 918, 970, 1104, 1105
BspMAI CTGCAG 1 cut(s) 1040
BspMI ACCTGC 2 cut(s) 766, 904
BspOI GCTAGC 1 cut(s) 362
BspPI GGATC 5 cut(s) 289, 374, 439, 542, 905
BspQI GCTCTTC 1 cut(s) 232
BspT104I TTCGAA 1 cut(s) 945
BspT107I GGYRCC 4 cut(s) 462, 778, 916, 968
BsrDI GCAATG 5 cut(s) 63, 503, 761, 908, 1170
BsrGI TGTACA 1 cut(s) 1192
BsrI ACTGG 6 cut(s) 111, 477, 806, 1013, 1125, 1276
BssECI CCNNGG 1 cut(s) 1306
BssMI GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
BssNAI GTATAC 1 cut(s) 442
BssT1I CCWWGG 1 cut(s) 1306
Bst1107I GTATAC 1 cut(s) 442
Bst2UI CCWGG 1 cut(s) 711
Bst4CI ACNGT 4 cut(s) 439, 586, 1197, 1214
Bst6I CTCTTC 3 cut(s) 232, 608, 947
BstAPI GCANNNNNTGC 1 cut(s) 1259
BstAUI TGTACA 1 cut(s) 1192
BstBI TTCGAA 1 cut(s) 945
BstC8I GCNNGC 2 cut(s) 216, 360
BstDEI CTNAG 6 cut(s) 21, 249, 458, 607, 1134, 1369
BstF5I GGATG 4 cut(s) 582, 1151, 1175, 1316
BstFNI CGCG 1 cut(s) 398
BstHHI GCGC 2 cut(s) 792, 1361
BstKTI GATC 8 cut(s) 141, 284, 369, 382, 434, 499, 537, 900
BstMAI GTCTC 2 cut(s) 126, 448
BstMBI GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
BstMWI GCNNNNNNNGC 8 cut(s) 50, 59, 244, 514, 623, 772, 1259, 1365
BstNI CCWGG 1 cut(s) 711
BstNSI RCATGY 2 cut(s) 481, 1283
BstSCI CCNGG 1 cut(s) 709
BstSFI CTRYAG 1 cut(s) 1036
BstUI CGCG 1 cut(s) 398
BstV1I GCAGC 8 cut(s) 62, 65, 292, 412, 629, 1050, 1219, 1249
BstV2I GAAGAC 3 cut(s) 381, 735, 869
BstZ17I GTATAC 1 cut(s) 442
Bsu36I CCTNAGG 1 cut(s) 1134
BsuRI GGCC 3 cut(s) 17, 124, 247
BtsCI GGATG 4 cut(s) 582, 1151, 1175, 1316
BtsIMutI CAGTG 2 cut(s) 118, 470
BveI ACCTGC 2 cut(s) 766, 904
Cac8I GCNNGC 2 cut(s) 216, 360
CciI TCATGA 1 cut(s) 900
CfoI GCGC 2 cut(s) 792, 1361
Cfr13I GGNCC 1 cut(s) 1103
Csp6I GTAC 5 cut(s) 612, 779, 917, 1193, 1420
CviQI GTAC 5 cut(s) 612, 779, 917, 1193, 1420
DdeI CTNAG 6 cut(s) 21, 249, 458, 607, 1134, 1369
DpnI GATC 8 cut(s) 140, 283, 368, 381, 433, 498, 536, 899
DpnII GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
Eam1104I CTCTTC 3 cut(s) 232, 608, 947
EarI CTCTTC 3 cut(s) 232, 608, 947
Eco130I CCWWGG 1 cut(s) 1306
Eco147I AGGCCT 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 1103
Eco81I CCTNAGG 1 cut(s) 1134
EcoO109I RGGNCCY 1 cut(s) 1103
EcoRI GAATTC 1 cut(s) 904
EcoRII CCWGG 1 cut(s) 709
EcoT14I CCWWGG 1 cut(s) 1306
ErhI CCWWGG 1 cut(s) 1306
Esp3I CGTCTC 1 cut(s) 126
FaqI GGGAC 2 cut(s) 1116, 1208
FauNDI CATATG 1 cut(s) 953
FblI GTMKAC 1 cut(s) 441
Fnu4HI GCNGC 8 cut(s) 51, 54, 306, 426, 618, 1039, 1233, 1263
FokI GGATG 4 cut(s) 589, 1138, 1162, 1303
Fsp4HI GCNGC 8 cut(s) 51, 54, 306, 426, 618, 1039, 1233, 1263
FspBI CTAG 4 cut(s) 359, 530, 747, 1337
FspI TGCGCA 1 cut(s) 791
GlaI GCGC 2 cut(s) 791, 1360
GluI GCNGC 8 cut(s) 51, 54, 306, 426, 618, 1039, 1233, 1263
GsaI CCCAGC 1 cut(s) 1085
GsuI CTGGAG 2 cut(s) 240, 744
HaeIII GGCC 3 cut(s) 17, 124, 247
HapII CCGG 1 cut(s) 149
HhaI GCGC 2 cut(s) 792, 1361
Hin6I GCGC 2 cut(s) 790, 1359
HinP1I GCGC 2 cut(s) 790, 1359
HindIII AAGCTT 1 cut(s) 624
HinfI GANTC 6 cut(s) 179, 294, 695, 701, 758, 1411
HpaII CCGG 1 cut(s) 149
Hpy166II GTNNAC 2 cut(s) 442, 1070
Hpy188I TCNGA 3 cut(s) 24, 545, 700
Hpy188III TCNNGA 9 cut(s) 163, 723, 755, 853, 895, 901, 1003, 1115, 1415
Hpy8I GTNNAC 2 cut(s) 442, 1070
HpyAV CCTTC 3 cut(s) 562, 649, 664
HpyCH4III ACNGT 4 cut(s) 439, 586, 1197, 1214
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 59, 244, 514, 623, 772, 1259, 1365
HpyF3I CTNAG 6 cut(s) 21, 249, 458, 607, 1134, 1369
HspAI GCGC 2 cut(s) 790, 1359
KflI GGGWCCC 1 cut(s) 1103
KpnI GGTACC 2 cut(s) 782, 920
Kzo9I GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
LguI GCTCTTC 1 cut(s) 232
LmnI GCTCC 3 cut(s) 47, 422, 887
Lsp1109I GCAGC 8 cut(s) 62, 65, 292, 412, 629, 1050, 1219, 1249
LweI GCATC 3 cut(s) 549, 992, 1325
MaeI CTAG 4 cut(s) 359, 530, 747, 1337
MaeIII GTNAC 3 cut(s) 580, 934, 1442
MalI GATC 8 cut(s) 140, 283, 368, 381, 433, 498, 536, 899
MboI GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
MfeI CAATTG 3 cut(s) 63, 921, 1257
MlyI GAGTC 1 cut(s) 710
MmeI TCCRAC 2 cut(s) 271, 672
MseI TTAA 4 cut(s) 84, 128, 201, 1453
MslI CAYNNNNRTG 1 cut(s) 974
MspA1I CMGCKG 1 cut(s) 1041
MspI CCGG 1 cut(s) 149
MspR9I CCNGG 1 cut(s) 711
MunI CAATTG 3 cut(s) 63, 921, 1257
MvaI CCWGG 1 cut(s) 711
MvnI CGCG 1 cut(s) 398
MwoI GCNNNNNNNGC 8 cut(s) 50, 59, 244, 514, 623, 772, 1259, 1365
NdeI CATATG 1 cut(s) 953
NdeII GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
NheI GCTAGC 1 cut(s) 358
NlaIV GGNNCC 6 cut(s) 464, 780, 918, 970, 1104, 1105
NsbI TGCGCA 1 cut(s) 791
NspI RCATGY 2 cut(s) 481, 1283
NspV TTCGAA 1 cut(s) 945
OliI CACNNNNGTG 1 cut(s) 974
PagI TCATGA 1 cut(s) 900
PceI AGGCCT 1 cut(s) 124
PciSI GCTCTTC 1 cut(s) 232
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PfeI GAWTC 5 cut(s) 179, 294, 695, 758, 1411
PflMI CCANNNNNTGG 1 cut(s) 894
PkrI GCNGC 8 cut(s) 52, 55, 307, 427, 619, 1040, 1234, 1264
PleI GAGTC 1 cut(s) 709
PpsI GAGTC 1 cut(s) 709
PpuMI RGGWCCY 1 cut(s) 1103
PshBI ATTAAT 1 cut(s) 84
Psp5II RGGWCCY 1 cut(s) 1103
Psp6I CCWGG 1 cut(s) 709
PspFI CCCAGC 1 cut(s) 1081
PspGI CCWGG 1 cut(s) 709
PspN4I GGNNCC 6 cut(s) 464, 780, 918, 970, 1104, 1105
PspPI GGNCC 1 cut(s) 1103
PspPPI RGGWCCY 1 cut(s) 1103
PstI CTGCAG 1 cut(s) 1040
PvuII CAGCTG 1 cut(s) 1041
RsaI GTAC 5 cut(s) 613, 780, 918, 1194, 1421
RsaNI GTAC 5 cut(s) 612, 779, 917, 1193, 1420
RseI CAYNNNNRTG 1 cut(s) 974
SapI GCTCTTC 1 cut(s) 232
SaqAI TTAA 4 cut(s) 84, 128, 201, 1453
SatI GCNGC 8 cut(s) 51, 54, 306, 426, 618, 1039, 1233, 1263
Sau3AI GATC 8 cut(s) 138, 281, 366, 379, 431, 496, 534, 897
Sau96I GGNCC 1 cut(s) 1103
SchI GAGTC 1 cut(s) 710
ScrFI CCNGG 1 cut(s) 711
SfaNI GCATC 3 cut(s) 549, 992, 1325
SfcI CTRYAG 1 cut(s) 1036
SfuI TTCGAA 1 cut(s) 945
SinI GGWCC 1 cut(s) 1103
SmiMI CAYNNNNRTG 1 cut(s) 974
SseBI AGGCCT 1 cut(s) 124
SsiI CCGC 2 cut(s) 396, 740
SspMI CTAG 4 cut(s) 359, 530, 747, 1337
StuI AGGCCT 1 cut(s) 124
StyD4I CCNGG 1 cut(s) 709
StyI CCWWGG 1 cut(s) 1306
TaaI ACNGT 4 cut(s) 439, 586, 1197, 1214
TaqI TCGA 3 cut(s) 7, 378, 945
TatI WGTACW 2 cut(s) 1192, 1419
TfiI GAWTC 5 cut(s) 179, 294, 695, 758, 1411
Tru1I TTAA 4 cut(s) 84, 128, 201, 1453
Tru9I TTAA 4 cut(s) 84, 128, 201, 1453
TscAI CASTG 2 cut(s) 118, 477
TseI GCWGC 8 cut(s) 50, 53, 305, 425, 617, 1038, 1232, 1262
TspGWI ACGGA 1 cut(s) 922
TspRI CASTG 2 cut(s) 118, 477
Van91I CCANNNNNTGG 1 cut(s) 894
VpaK11BI GGWCC 1 cut(s) 1103
VspI ATTAAT 1 cut(s) 84
XapI RAATTY 3 cut(s) 342, 904, 1435
XceI RCATGY 2 cut(s) 481, 1283
XmiI GTMKAC 1 cut(s) 441
XspI CTAG 4 cut(s) 359, 530, 747, 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.