Rw2G011700

Membrane protein-like protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
11789343 .. 11792314
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G011700.1

Sequence Viewer

Length: 1437 bp
ATGGCTCGAATGATGATCACTCGAAAAACAGTATCAGCAGTAGCACTTATGGGATGGACAGTGTTCATTAGCCTCCTAATGATAAGTGAAGTTGTGAATGCAGAAAGGCCCCTAAAAGATGAGCAGAAGCCAAGAAATTTTGTTGAAGAAGATGTAAAGCAAGGAGTCTTTGTGAGAATGATGAAGCTTCTCTGGCAGACTGGAGGGTCTTCTTATCAACCTGTTTGGCCTGAGATGAAGTTTGGTTGGAAAATTGTAGTGGGAACAATAGTTGGGTTCTTTGGTGCTGCATTGGGTAGTGTTGGAGGTGTTGGTGGTGGAGGAATTTTTGTTCCGATGCTCGCGTTGATCGTTGGTTTCGATCCCAAGTCTTCCACCGCCATTTCCAAGTGTATGATAATGGGAGCTGCAGGCTCAACAGTGTACTTCAATTTGAGACTTAGGCACCCAACACTGGACATGCCCCTTATAGATTATGATCTGGCTTTGCTCTTTCAGCCAATGCTTATGCTAGGAATCAGCATTGGAGTTGCCTTCAACGTCATGTTTGCCGATTGGATGGTCACAGTTCTACTCATCATTCTTTTCCTAGGGACAGCAGCAAAAGCTTTAATGAAAGGCATACAAACATGGAAGAAAGAAACAATGATGAAGAAGGAAGCCGAAAAGCAGTTGGAATCGGAGTCCAAACCCGGTGATGGTTCTGGAGAAGACTACAAACCATTACCTAGCGGTCCAGTTTCATTGCAAGATGACGAAGTACCTATCTCGCGCAACGTTTACTGGAAAGAGTTGTTACTGCTTGTGTTTGTGTGGGTGGCTTTCCTTATTGTTCAGATTGTCAAGACATATACCGAGACTTGCTCCACCATGTTCTGGGTCCTGAATTCCTTGCAGGTACCAATTGCTGCCTCAGTAACAGTTTTTGAAGCGATATGCTTGTGGAAAGGCACCAGGGTAATTGCATCAAAAGGAAAGGAAATCACAAACTGGAAGTTGCATCAGCTATTTCTTTACTGCTGCTGTGGGATTGTAGCTGGTATGGTTGGTGGACTACTTGGCCTCGGAGGCGGTTTCATCTTGGGACCCCTATTTCTTGAACTTGGAATTCCTCCTCAGGTAGCAAGTGCTACATCAACCTTTGCTATGCTATTCTCATCCTCCATGTCAGTTGTACAATATTACCTTCTCAACCGTTTCCCAGTTCCATATGCTGCTTATTTTGTTTTGGTTGCTACAATTGCTGCCTTTACTGGTCAACATGTCGTGAGAAAGATCATTGCAGTGCTCGGAAGAGCCTCCATTGTCATCTTCATACTAGCTATGACGATTTTCGTCAGTGCAATCAGCTTAGGGGGGGTCGGAATAGCAAACATGGTTGAGAAGATGGAGAATCAAGAGTACATGGGGTTTGAAAATTTCTGTCACCAGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

52.44

Weight (kDa)

8.68

Isoelectric Point (pI)

29.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 90 - 209 3e-12 Sulfite exporter TauE/SafE
TauE PF01925 340 - 446 2.6e-13 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 886
Acc65I GGTACC 1 cut(s) 898
AccB1I GGYRCC 3 cut(s) 444, 898, 950
AccB7I CCANNNNNTGG 1 cut(s) 876
AccII CGCG 2 cut(s) 344, 772
AciI CCGC 3 cut(s) 378, 732, 1071
AclI AACGTT 1 cut(s) 777
AclWI GGATC 1 cut(s) 356
AcsI RAATTY 5 cut(s) 136, 324, 886, 1107, 1417
AfaI GTAC 5 cut(s) 425, 762, 900, 1176, 1403
AfiI CCNNNNNNNGG 3 cut(s) 454, 698, 876
AflIII ACRYGT 1 cut(s) 1261
AgsI TTSAA 6 cut(s) 146, 430, 538, 929, 1100, 1415
AjnI CCWGG 1 cut(s) 953
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
AluBI AGCT 7 cut(s) 187, 407, 608, 1006, 1037, 1322, 1350
AluI AGCT 7 cut(s) 187, 407, 608, 1006, 1037, 1322, 1350
Alw21I GWGCWC 1 cut(s) 1290
Alw26I GTCTC 2 cut(s) 430, 851
AlwI GGATC 1 cut(s) 356
AoxI GGCC 3 cut(s) 107, 227, 1060
ApeKI GCWGC 7 cut(s) 287, 407, 599, 908, 1020, 1214, 1244
ApoI RAATTY 5 cut(s) 136, 324, 886, 1107, 1417
Asp718I GGTACC 1 cut(s) 898
AspA2I CCTAGG 1 cut(s) 589
AspLEI GCGC 1 cut(s) 774
AspS9I GGNCC 4 cut(s) 108, 734, 880, 1085
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 2 cut(s) 707, 1418
AvaII GGWCC 3 cut(s) 734, 880, 1085
AvrII CCTAGG 1 cut(s) 589
AxyI CCTNAGG 1 cut(s) 1116
BanI GGYRCC 3 cut(s) 444, 898, 950
BbsI GAAGAC 3 cut(s) 201, 363, 717
Bbv12I GWGCWC 1 cut(s) 1290
BbvI GCAGC 7 cut(s) 274, 394, 611, 895, 1007, 1201, 1231
BccI CCATC 4 cut(s) 48, 553, 692, 1381
BciT130I CCWGG 1 cut(s) 955
BclI TGATCA 1 cut(s) 15
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 2 cut(s) 430, 851
BfaI CTAG 4 cut(s) 512, 590, 729, 1319
BfmI CTRYAG 1 cut(s) 408
BfuAI ACCTGC 1 cut(s) 886
BglI GCCNNNNNGGC 1 cut(s) 1068
BisI GCNGC 7 cut(s) 288, 408, 600, 909, 1021, 1215, 1245
BlnI CCTAGG 1 cut(s) 589
BlsI GCNGC 7 cut(s) 289, 409, 601, 910, 1022, 1216, 1246
Bme1390I CCNGG 2 cut(s) 693, 955
Bme18I GGWCC 3 cut(s) 734, 880, 1085
BmgT120I GGNCC 4 cut(s) 108, 734, 880, 1085
BmiI GGNNCC 7 cut(s) 110, 446, 881, 900, 952, 1086, 1087
BmrFI CCNGG 2 cut(s) 693, 955
BmrI ACTGGG 1 cut(s) 1196
BmsI GCATC 3 cut(s) 327, 974, 1009
BmuI ACTGGG 1 cut(s) 1196
BpiI GAAGAC 3 cut(s) 201, 363, 717
BplI GAGNNNNNCTC 2 cut(s) 848, 880
BpmI CTGGAG 2 cut(s) 222, 726
Bpu10I CCTNAGC 1 cut(s) 1351
BpuMI CCSGG 1 cut(s) 693
BsaBI GATNNNNATC 1 cut(s) 477
BsaJI CCNNGG 3 cut(s) 589, 954, 1063
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bsc4I CCNNNNNNNGG 3 cut(s) 454, 698, 876
Bse1I ACTGG 8 cut(s) 205, 459, 737, 788, 995, 1202, 1258, 1429
Bse21I CCTNAGG 1 cut(s) 1116
Bse3DI GCAATG 2 cut(s) 743, 1278
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 1 cut(s) 955
BseDI CCNNGG 3 cut(s) 589, 954, 1063
BseGI GGATG 3 cut(s) 59, 564, 1157
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 3 cut(s) 454, 698, 876
BseMI GCAATG 2 cut(s) 743, 1278
BseMII CTCAG 3 cut(s) 222, 927, 1130
BseNI ACTGG 8 cut(s) 205, 459, 737, 788, 995, 1202, 1258, 1429
BseRI GAGGAG 1 cut(s) 1104
BseXI GCAGC 7 cut(s) 274, 394, 611, 895, 1007, 1201, 1231
Bsh1236I CGCG 2 cut(s) 344, 772
BshFI GGCC 3 cut(s) 109, 229, 1062
BshNI GGYRCC 3 cut(s) 444, 898, 950
BsiHKAI GWGCWC 1 cut(s) 1290
BsiSI CCGG 1 cut(s) 693
BslFI GGGAC 2 cut(s) 607, 1098
BslI CCNNNNNNNGG 3 cut(s) 454, 698, 876
BsmAI GTCTC 2 cut(s) 430, 851
BsmFI GGGAC 2 cut(s) 607, 1098
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 3 cut(s) 109, 229, 1062
Bsp1286I GDGCHC 1 cut(s) 1290
Bsp1407I TGTACA 1 cut(s) 1174
Bsp143I GATC 5 cut(s) 15, 348, 361, 478, 1275
BspACI CCGC 3 cut(s) 378, 732, 1071
BspANI GGCC 3 cut(s) 109, 229, 1062
BspCNI CTCAG 3 cut(s) 223, 926, 1129
BspFNI CGCG 2 cut(s) 344, 772
BspLI GGNNCC 7 cut(s) 110, 446, 881, 900, 952, 1086, 1087
BspMAI CTGCAG 1 cut(s) 412
BspMI ACCTGC 1 cut(s) 886
BspPI GGATC 1 cut(s) 356
BspQI GCTCTTC 1 cut(s) 1288
BspT107I GGYRCC 3 cut(s) 444, 898, 950
BsrDI GCAATG 2 cut(s) 743, 1278
BsrGI TGTACA 1 cut(s) 1174
BsrI ACTGG 8 cut(s) 205, 459, 737, 788, 995, 1202, 1258, 1429
BssECI CCNNGG 3 cut(s) 589, 954, 1063
BssMI GATC 5 cut(s) 15, 348, 361, 478, 1275
BssT1I CCWWGG 1 cut(s) 589
Bst2UI CCWGG 1 cut(s) 955
Bst4CI ACNGT 6 cut(s) 31, 61, 421, 568, 922, 1196
Bst6I CTCTTC 1 cut(s) 1288
BstAUI TGTACA 1 cut(s) 1174
BstC8I GCNNGC 2 cut(s) 342, 412
BstDEI CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
BstF5I GGATG 3 cut(s) 59, 564, 1157
BstFNI CGCG 2 cut(s) 344, 772
BstHHI GCGC 1 cut(s) 774
BstKTI GATC 5 cut(s) 18, 351, 364, 481, 1278
BstMAI GTCTC 2 cut(s) 430, 851
BstMBI GATC 5 cut(s) 15, 348, 361, 478, 1275
BstMWI GCNNNNNNNGC 5 cut(s) 193, 496, 605, 1068, 1241
BstNI CCWGG 1 cut(s) 955
BstNSI RCATGY 2 cut(s) 463, 1265
BstSCI CCNGG 2 cut(s) 691, 953
BstSFI CTRYAG 1 cut(s) 408
BstUI CGCG 2 cut(s) 344, 772
BstV1I GCAGC 7 cut(s) 274, 394, 611, 895, 1007, 1201, 1231
BstV2I GAAGAC 3 cut(s) 201, 363, 717
Bsu36I CCTNAGG 1 cut(s) 1116
BsuRI GGCC 3 cut(s) 109, 229, 1062
BtsCI GGATG 3 cut(s) 59, 564, 1157
BtsI GCAGTG 1 cut(s) 1290
BtsIMutI CAGTG 5 cut(s) 66, 426, 452, 1290, 1345
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 2 cut(s) 342, 412
CfoI GCGC 1 cut(s) 774
Cfr13I GGNCC 4 cut(s) 108, 734, 880, 1085
Csp6I GTAC 5 cut(s) 424, 761, 899, 1175, 1402
CviAII CATG 8 cut(s) 460, 544, 630, 871, 1165, 1262, 1375, 1405
CviQI GTAC 5 cut(s) 424, 761, 899, 1175, 1402
DdeI CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
DpnI GATC 5 cut(s) 17, 350, 363, 480, 1277
DpnII GATC 5 cut(s) 15, 348, 361, 478, 1275
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 1288
EarI CTCTTC 1 cut(s) 1288
Eco130I CCWWGG 1 cut(s) 589
Eco47I GGWCC 3 cut(s) 734, 880, 1085
Eco81I CCTNAGG 1 cut(s) 1116
EcoO109I RGGNCCY 3 cut(s) 108, 880, 1085
EcoRI GAATTC 2 cut(s) 886, 1107
EcoRII CCWGG 1 cut(s) 953
EcoT14I CCWWGG 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 589
FaeI CATG 8 cut(s) 463, 547, 633, 874, 1168, 1265, 1378, 1408
FaqI GGGAC 2 cut(s) 607, 1098
FatI CATG 8 cut(s) 459, 543, 629, 870, 1164, 1261, 1374, 1404
FauNDI CATATG 1 cut(s) 1210
FbaI TGATCA 1 cut(s) 15
Fnu4HI GCNGC 7 cut(s) 288, 408, 600, 909, 1021, 1215, 1245
FokI GGATG 3 cut(s) 66, 571, 1144
Fsp4HI GCNGC 7 cut(s) 288, 408, 600, 909, 1021, 1215, 1245
FspBI CTAG 4 cut(s) 512, 590, 729, 1319
GlaI GCGC 1 cut(s) 773
GluI GCNGC 7 cut(s) 288, 408, 600, 909, 1021, 1215, 1245
GsuI CTGGAG 2 cut(s) 222, 726
HaeIII GGCC 3 cut(s) 109, 229, 1062
HapII CCGG 1 cut(s) 693
HhaI GCGC 1 cut(s) 774
Hin1II CATG 8 cut(s) 463, 547, 633, 874, 1168, 1265, 1378, 1408
Hin6I GCGC 1 cut(s) 772
HinP1I GCGC 1 cut(s) 772
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HindIII AAGCTT 2 cut(s) 185, 606
HinfI GANTC 5 cut(s) 165, 516, 677, 683, 1393
HpaII CCGG 1 cut(s) 693
HphI GGTGA 2 cut(s) 707, 1418
Hpy166II GTNNAC 4 cut(s) 424, 781, 1052, 1259
Hpy188I TCNGA 6 cut(s) 336, 682, 837, 1067, 1292, 1364
Hpy188III TCNNGA 6 cut(s) 705, 844, 883, 1097, 1267, 1397
Hpy8I GTNNAC 4 cut(s) 424, 781, 1052, 1259
HpyAV CCTTC 3 cut(s) 544, 649, 1196
HpyCH4III ACNGT 6 cut(s) 31, 61, 421, 568, 922, 1196
HpyCH4IV ACGT 2 cut(s) 540, 777
HpyCH4V TGCA 9 cut(s) 101, 290, 410, 748, 895, 965, 1000, 1283, 1343
HpyF10VI GCNNNNNNNGC 5 cut(s) 193, 496, 605, 1068, 1241
HpyF3I CTNAG 5 cut(s) 231, 440, 913, 1116, 1351
HpySE526I ACGT 2 cut(s) 540, 777
Hsp92II CATG 8 cut(s) 463, 547, 633, 874, 1168, 1265, 1378, 1408
HspAI GCGC 1 cut(s) 772
KflI GGGWCCC 1 cut(s) 1085
KpnI GGTACC 1 cut(s) 902
Ksp22I TGATCA 1 cut(s) 15
Kzo9I GATC 5 cut(s) 15, 348, 361, 478, 1275
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 2 cut(s) 404, 869
Lsp1109I GCAGC 7 cut(s) 274, 394, 611, 895, 1007, 1201, 1231
LweI GCATC 3 cut(s) 327, 974, 1009
MaeI CTAG 4 cut(s) 512, 590, 729, 1319
MaeII ACGT 2 cut(s) 540, 777
MaeIII GTNAC 4 cut(s) 562, 795, 916, 1424
MalI GATC 5 cut(s) 17, 350, 363, 480, 1277
MboI GATC 5 cut(s) 15, 348, 361, 478, 1275
MfeI CAATTG 2 cut(s) 903, 1239
MhlI GDGCHC 1 cut(s) 1290
MlyI GAGTC 2 cut(s) 174, 692
MmeI TCCRAC 4 cut(s) 227, 283, 654, 1342
MseI TTAA 2 cut(s) 611, 1435
MslI CAYNNNNRTG 1 cut(s) 1283
MspI CCGG 1 cut(s) 693
MspR9I CCNGG 2 cut(s) 693, 955
MunI CAATTG 2 cut(s) 903, 1239
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 1 cut(s) 955
MvnI CGCG 2 cut(s) 344, 772
MwoI GCNNNNNNNGC 5 cut(s) 193, 496, 605, 1068, 1241
NciI CCSGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 1210
NdeII GATC 5 cut(s) 15, 348, 361, 478, 1275
NlaIII CATG 8 cut(s) 463, 547, 633, 874, 1168, 1265, 1378, 1408
NlaIV GGNNCC 7 cut(s) 110, 446, 881, 900, 952, 1086, 1087
NmuCI GTSAC 2 cut(s) 562, 1424
NspI RCATGY 2 cut(s) 463, 1265
PciI ACATGT 1 cut(s) 1261
PciSI GCTCTTC 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 357
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 3 cut(s) 516, 677, 1393
PflMI CCANNNNNTGG 1 cut(s) 876
PkrI GCNGC 7 cut(s) 289, 409, 601, 910, 1022, 1216, 1246
PleI GAGTC 2 cut(s) 173, 691
PpsI GAGTC 2 cut(s) 173, 691
PpuMI RGGWCCY 2 cut(s) 880, 1085
PscI ACATGT 1 cut(s) 1261
Psp1406I AACGTT 1 cut(s) 777
Psp5II RGGWCCY 2 cut(s) 880, 1085
Psp6I CCWGG 1 cut(s) 953
PspGI CCWGG 1 cut(s) 953
PspN4I GGNNCC 7 cut(s) 110, 446, 881, 900, 952, 1086, 1087
PspPI GGNCC 4 cut(s) 108, 734, 880, 1085
PspPPI RGGWCCY 2 cut(s) 880, 1085
PstI CTGCAG 1 cut(s) 412
RsaI GTAC 5 cut(s) 425, 762, 900, 1176, 1403
RsaNI GTAC 5 cut(s) 424, 761, 899, 1175, 1402
RseI CAYNNNNRTG 1 cut(s) 1283
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 2 cut(s) 611, 1435
SatI GCNGC 7 cut(s) 288, 408, 600, 909, 1021, 1215, 1245
Sau3AI GATC 5 cut(s) 15, 348, 361, 478, 1275
Sau96I GGNCC 4 cut(s) 108, 734, 880, 1085
SchI GAGTC 2 cut(s) 174, 692
ScrFI CCNGG 2 cut(s) 693, 955
SduI GDGCHC 1 cut(s) 1290
SfaNI GCATC 3 cut(s) 327, 974, 1009
SfcI CTRYAG 1 cut(s) 408
SinI GGWCC 3 cut(s) 734, 880, 1085
SmiMI CAYNNNNRTG 1 cut(s) 1283
SsiI CCGC 3 cut(s) 378, 732, 1071
SspI AATATT 1 cut(s) 1181
SspMI CTAG 4 cut(s) 512, 590, 729, 1319
StyD4I CCNGG 2 cut(s) 691, 953
StyI CCWWGG 1 cut(s) 589
TaaI ACNGT 6 cut(s) 31, 61, 421, 568, 922, 1196
TaiI ACGT 2 cut(s) 543, 780
TaqI TCGA 3 cut(s) 7, 22, 360
TatI WGTACW 3 cut(s) 423, 1174, 1401
TfiI GAWTC 3 cut(s) 516, 677, 1393
Tru1I TTAA 2 cut(s) 611, 1435
Tru9I TTAA 2 cut(s) 611, 1435
TscAI CASTG 5 cut(s) 66, 426, 459, 1290, 1345
TseFI GTSAC 2 cut(s) 562, 1424
TseI GCWGC 7 cut(s) 287, 407, 599, 908, 1020, 1214, 1244
Tsp45I GTSAC 2 cut(s) 562, 1424
TspDTI ATGAA 8 cut(s) 55, 197, 251, 629, 665, 732, 1066, 1303
TspRI CASTG 5 cut(s) 66, 426, 459, 1290, 1345
Van91I CCANNNNNTGG 1 cut(s) 876
VpaK11BI GGWCC 3 cut(s) 734, 880, 1085
XapI RAATTY 5 cut(s) 136, 324, 886, 1107, 1417
XceI RCATGY 2 cut(s) 463, 1265
XmaJI CCTAGG 1 cut(s) 589
XspI CTAG 4 cut(s) 512, 590, 729, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.